LOCUS NC_014722 2755309 bp DNA circular BCT 03-JAN-2013
DEFINITION Burkholderia rhizoxinica HKI 454 chromosome, complete genome.
ACCESSION NC_014722
VERSION NC_014722.1 GI:312794749
DBLINK Project: 60487
BioProject: PRJNA60487
KEYWORDS complete genome.
SOURCE Burkholderia rhizoxinica HKI 454
ORGANISM Burkholderia rhizoxinica HKI 454
Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
Burkholderiaceae; Burkholderia.
REFERENCE 1 (bases 1 to 2755309)
AUTHORS Lackner,G., Moebius,N., Partida-Martinez,L. and Hertweck,C.
TITLE Complete genome sequence of Burkholderia rhizoxinica, an
Endosymbiont of Rhizopus microsporus
JOURNAL J. Bacteriol. 193 (3), 783-784 (2011)
PUBMED 21131495
REFERENCE 2 (bases 1 to 2755309)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (19-NOV-2010) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 2755309)
AUTHORS Lackner,G.
TITLE Direct Submission
JOURNAL Submitted (01-SEP-2010) Lackner G., Leibniz Institute for Natural
Product, Research, Biomolecular Chemistry, Beutenbergstr. 11a,
07743 Jena, GERMANY
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence is identical to FR687359.
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..2755309
/organism="Burkholderia rhizoxinica HKI 454"
/mol_type="genomic DNA"
/strain="HKI 454"
/isolate="B1"
/db_xref="taxon:882378"
gene 1..1593
/locus_tag="RBRH_00964"
/db_xref="GeneID:9985325"
CDS 1..1593
/locus_tag="RBRH_00964"
/codon_start=1
/transl_table=11
/product="chromosomal replication initiator protein dnaA"
/protein_id="YP_004027672.1"
/db_xref="GI:312794750"
/db_xref="GeneID:9985325"
/translation="MRPIRRRDTTTDHMNDFWQHCSTLLARELTPQQYATWIKPLTLV
DFDAEASTVRIAAPNRFKLDWVKSQFSGRITDLARDFWQHPVHVQFVLDPKAGMKASP
ARRASGSPLANAVDAVIAAASGTSAAALANGSPPQPTMAQALSTASAATADGNAELDL
PNLDANEAAAARRNFRAGASAPSPEADSAYERSKLNPVLTFENFVTGKANQLARAAAI
QVADNPGVSYNPLFLYGGVGLGKTHLIHAIGNQLLQDKANARIRYIHAEQYVSDVVKA
YQRKAFDEFKRYYHSLDLLLIDDIQFFSGKSRTQEEFFYAFEALVANKAQVIITSDTY
PKEISGIDDRLISRFDSGLTVAIEPPELEMRVAILMRKAQSEGVALNEDVAFFVAKHL
RSNVRELEGALRKILAYSKFHGREITIELTKEALKDLLTVQNRQISVENIQKTVADFY
NIKVADMYSKKRPANIARPRQIAMYLAKELTQKSLPEIGELFGGRDHTTVLHAVRKIS
DERGKDAQLNHELHVLEQTLKG"
misc_feature 43..240
/locus_tag="RBRH_00964"
/note="DnaA N-terminal domain; Region: DnaA_N; pfam11638"
/db_xref="CDD:204696"
misc_feature 598..1281
/locus_tag="RBRH_00964"
/note="DnaA regulatory inactivator Hda; Region:
DnaA_homol_Hda; TIGR03420"
/db_xref="CDD:163254"
misc_feature 622..1053
/locus_tag="RBRH_00964"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature 703..726
/locus_tag="RBRH_00964"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature order(706..729,892..894,1000..1002)
/locus_tag="RBRH_00964"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature 880..897
/locus_tag="RBRH_00964"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature <925..1281
/locus_tag="RBRH_00964"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:213113"
misc_feature 1042..1044
/locus_tag="RBRH_00964"
/note="arginine finger; other site"
/db_xref="CDD:99707"
misc_feature 1315..1584
/locus_tag="RBRH_00964"
/note="C-terminal domain of bacterial DnaA proteins. The
DNA-binding C-terminal domain of DnaA contains a
helix-turn-helix motif that specifically interacts with
the DnaA box, a 9-mer motif that occurs repetitively in
the replication origin oriC. Multiple...; Region:
Bac_DnaA_C; cd06571"
/db_xref="CDD:119330"
misc_feature order(1384..1386,1408..1413,1432..1434,1450..1458,
1483..1497,1504..1506,1513..1518)
/locus_tag="RBRH_00964"
/note="DnaA box-binding interface [nucleotide binding];
other site"
/db_xref="CDD:119330"
gene 1879..3084
/locus_tag="RBRH_00962"
/db_xref="GeneID:9985732"
CDS 1879..3084
/locus_tag="RBRH_00962"
/EC_number="2.7.7.7"
/codon_start=1
/transl_table=11
/product="DNA polymerase III subunit beta"
/protein_id="YP_004027673.1"
/db_xref="GI:312794751"
/db_xref="GeneID:9985732"
/translation="MPCGAGPGAAPHRALCTAMAMGADEPSYQRRNSMQLVKTERDTL
LRPLQTVSGIVERRHTLPILANLLISKNGPDVSFLSTDLELQITTRADFGIGNEQVAT
TVAARKLVDILRAMPIGDVTLTLSDKRLTVQSGKSRFALQTLAADEFPTLAQAKDFGA
NLSVPQKTFKQLLGMVHFAMAQQDIRYYLNGMLLVVDGDQLMAVATDGHRLAFSSMKT
DGAFARQEVIIPRKTILELQRLLEDIDDPLTIDIASTQVKFTFGQVELVSKLVEGKFP
DFQRVIPKGHKNTFMIGRDELQHSLQRAAILTSDKFKGVRCIVAPGQLKIMSTNADQE
EAQEELEIAYQGDTLDVGFNVTYLLDVLANLKVDMIQVALGSDATSSALITIPENEQF
KYVVMPMRI"
misc_feature 1978..3081
/locus_tag="RBRH_00962"
/note="DNA polymerase III subunit beta; Validated; Region:
PRK05643"
/db_xref="CDD:180180"
misc_feature 1987..3078
/locus_tag="RBRH_00962"
/note="Beta clamp domain. The beta subunit (processivity
factor) of DNA polymerase III holoenzyme, refered to as
the beta clamp, forms a ring shaped dimer that encircles
dsDNA (sliding clamp) in bacteria. The beta-clamp is
structurally similar to the trimeric...; Region:
beta_clamp; cd00140"
/db_xref="CDD:29053"
misc_feature order(2050..2052,2197..2199,2218..2220,2572..2574)
/locus_tag="RBRH_00962"
/note="putative DNA binding surface [nucleotide binding];
other site"
/db_xref="CDD:29053"
misc_feature order(2200..2202,2209..2211,2284..2286,2290..2292,
2794..2796,2887..2892)
/locus_tag="RBRH_00962"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:29053"
misc_feature order(2494..2496,2500..2511,2938..2940,3067..3078)
/locus_tag="RBRH_00962"
/note="beta-clamp/clamp loader binding surface; other
site"
/db_xref="CDD:29053"
misc_feature order(2494..2496,2500..2505,2719..2721,2824..2826,
2863..2868,2947..2949,3067..3078)
/locus_tag="RBRH_00962"
/note="beta-clamp/translesion DNA polymerase binding
surface; other site"
/db_xref="CDD:29053"
gene 3136..5667
/locus_tag="RBRH_00960"
/db_xref="GeneID:9985731"
CDS 3136..5667
/locus_tag="RBRH_00960"
/EC_number="5.99.1.3"
/codon_start=1
/transl_table=11
/product="DNA gyrase subunit B"
/protein_id="YP_004027674.1"
/db_xref="GI:312794752"
/db_xref="GeneID:9985731"
/translation="MMFIGCLSSTQNRKKFMTEQHNLQANSSADNSYGESSIQILEGL
EAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSIDEALAGHCNDIHVVIHADNSISVTDN
GRGIPTDIKRDDKHEPKRSAAEIVMTELHAGGKFDQNSYKVSGGLHGVGVSCVNALSK
WLRLTVRRGGKKHFLEFHRGVVQERVLEQRDGEQVSPMLLIGDTENRGTEVHFLADDT
IFGTVEYHYDILAKRMRELSFLNNGVRIRLTDQRSGKEDDFAFAGGVKGFVEYINKTK
QTLHQNIFHVVGEKDGVGVEVAMQWNDSFNENVLCFTNNIPQRDGGTHMTGLRAAMTR
VINKYITDTEIAKKAKIETTGDDMREGLSCVLSVKVPEPKFSSQTKDKLVSSEVRAPV
EEVVAKALEQYLLETPNDAKVICGKIVDAARARDAARKAREMTRRKGVLDGVGLPGKL
ADCQEKDPAKSEIYIVEGDSAGGSAKQGRDRKFQAILPLRGKVLNVEKARYDKLLSSD
QIVTLITALGCGIGKDDYNLEKLRYHRIIIMTDADVDGAHIRTLLLTFFYRQMPEMIE
RGYVYIAQPPLFKLKAGKDERYLKDQHELNQHMLKLALHGAELVPSEGVAPIVGDALG
ELARSYLLAQAVVDRLSKLYDEAALEAVMDGVTIDLTSEDATRQSAQALQDKLRDSAL
KPDVSVLPQYDAVRELRSLRIERRHHGNIKVSIIDEEFLLTADFQQLANTANTFKGLI
GVGAMIKRGERTMAVTDFKSAMKWLIADAERNVSKQRYKGLGEMNPEQLWETTMDPAV
RRLLRVQIEDAIAADGIFTTLMGDEVEPRRAFIESNALRAGNIDV"
misc_feature 3214..5664
/locus_tag="RBRH_00960"
/note="DNA gyrase subunit B; Provisional; Region: gyrB;
PRK14939"
/db_xref="CDD:184903"
misc_feature 3325..3657
/locus_tag="RBRH_00960"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:28956"
misc_feature order(3343..3345,3355..3357,3364..3366,3430..3432,
3436..3438,3442..3444,3448..3453,3580..3591,3625..3627,
3631..3633,3646..3651,3655..3657)
/locus_tag="RBRH_00960"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28956"
misc_feature 3355..3357
/locus_tag="RBRH_00960"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:28956"
misc_feature order(3442..3444,3448..3450,3580..3582,3586..3588)
/locus_tag="RBRH_00960"
/note="G-X-G motif; other site"
/db_xref="CDD:28956"
misc_feature 3922..4392
/locus_tag="RBRH_00960"
/note="TopoIIA_Trans_DNA_gyrase: Transducer domain, having
a ribosomal S5 domain 2-like fold, of the type found in
proteins of the type IIA family of DNA topoisomerases
similar to the B subunits of E. coli DNA gyrase and E.
coli Topoisomerase IV which are; Region:
TopoII_Trans_DNA_gyrase; cd00822"
/db_xref="CDD:48467"
misc_feature 4075..4077
/locus_tag="RBRH_00960"
/note="anchoring element; other site"
/db_xref="CDD:48467"
misc_feature order(4249..4251,4258..4263,4267..4269)
/locus_tag="RBRH_00960"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:48467"
misc_feature order(4267..4269,4273..4275)
/locus_tag="RBRH_00960"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:48467"
misc_feature 4516..4860
/locus_tag="RBRH_00960"
/note="TOPRIM_TopoIIA_GyrB: topoisomerase-primase (TOPRIM)
nucleotidyl transferase/hydrolase domain of the type found
in proteins of the type IIA family of DNA topoisomerases
similar to the Escherichia coli GyrB subunit. TopoIIA
enzymes cut both strands of the...; Region:
TOPRIM_TopoIIA_GyrB; cd03366"
/db_xref="CDD:173786"
misc_feature order(4534..4539,4546..4548,4756..4758,4762..4764,
4768..4770)
/locus_tag="RBRH_00960"
/note="active site"
/db_xref="CDD:173786"
misc_feature order(4534..4536,4756..4758)
/locus_tag="RBRH_00960"
/note="putative metal-binding site [ion binding]; other
site"
/db_xref="CDD:173786"
misc_feature 5440..5631
/locus_tag="RBRH_00960"
/note="DNA gyrase B subunit, carboxyl terminus; Region:
DNA_gyraseB_C; pfam00986"
/db_xref="CDD:201537"
gene complement(5992..6813)
/locus_tag="RBRH_00959"
/db_xref="GeneID:9985730"
CDS complement(5992..6813)
/locus_tag="RBRH_00959"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027675.1"
/db_xref="GI:312794753"
/db_xref="GeneID:9985730"
/translation="MGEKFPGPFKCQSLDLVGQAEAGVRYFDLRVKRDEGNIYRFFHG
PGSTGGDALEEVKKLLSHAARDERNLYILKLHFKKRDARHFIRQLSDFEQRIIENNAS
GSEKSLGSLTIDNTIGQNRNILLLVKNAEDSIMEGSLKKYFWDYDKNTNTKWANQASG
SGTGSHILNFHGNLDVDRENKLNIIQTNMPMRANPVSKDFNHFFDIMKLFSVKNLAAD
QKERVTNFVRYLVLRGVSPGIISMDYAGKDDRSDTRLYRQLVDDENRRLANTNNA"
misc_feature complement(<6337..6786)
/locus_tag="RBRH_00959"
/note="Catalytic domain of phosphoinositide-specific
phospholipase C-like phosphodiesterases superfamily;
Region: PI-PLCc_GDPD_SF; cl14615"
/db_xref="CDD:213131"
misc_feature complement(order(6433..6435,6610..6612,6724..6726,
6730..6732))
/locus_tag="RBRH_00959"
/note="active site"
/db_xref="CDD:176498"
misc_feature complement(6685..6687)
/locus_tag="RBRH_00959"
/note="catalytic site [active]"
/db_xref="CDD:176498"
gene complement(7104..7217)
/locus_tag="RBRH_00958"
/db_xref="GeneID:9985729"
CDS complement(7104..7217)
/locus_tag="RBRH_00958"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027676.1"
/db_xref="GI:312794754"
/db_xref="GeneID:9985729"
/translation="MVPLSLMRWRKRANVIKSSRLKRVIIDALKVIDKPIY"
gene complement(7427..8335)
/locus_tag="RBRH_00957"
/db_xref="GeneID:9985728"
CDS complement(7427..8335)
/locus_tag="RBRH_00957"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027677.1"
/db_xref="GI:312794755"
/db_xref="GeneID:9985728"
/translation="MDRGEESESMQPIITLNKAIALSLEKYLLRISDESIDIRFDIPD
KTLLPDMPTVCVFLYDIQEDLELRQGQSRQYCAKTGTFDARQANVRCCYLVTYWEQLK
KEGMKPDGQPMVVMNAVLDALLSAELGTLLREAGLPSFSRVIAPTEHLSSLGNFWQSL
GDRPRLCLNFQVTIPVKIVPDQPIKAPPVFSTELESSKWEQYDKSLPFKRALVKQVLQ
ESDVNTMPEVRAQLARLAITCEYKEPNQPAVHISGLLDQATNNAVGEVINEYNNRWNE
MDEDLPNSLLVSTDLTVVNAPVHDAD"
misc_feature complement(7769..8284)
/locus_tag="RBRH_00957"
/note="Protein of unknown function (DUF4255); Region:
DUF4255; pfam14065"
/db_xref="CDD:206235"
gene complement(8418..10667)
/locus_tag="RBRH_00956"
/db_xref="GeneID:9985727"
CDS complement(8418..10667)
/locus_tag="RBRH_00956"
/codon_start=1
/transl_table=11
/product="ATP-dependent Zn proteases"
/protein_id="YP_004027678.1"
/db_xref="GI:312794756"
/db_xref="GeneID:9985727"
/translation="MAAHASIAAVAAGPNQRDVASMKTLSTDLLDALASGARQPDTVD
LANAPPANACVAHAFEVLGSWLEYVDQALQHLLVWQHQREDDRFNIAELLCTQEALEA
TRTQPRGMPHWSTASGDAPPWTTLCAPVPRGRLANVIDRFGLTHFETQVLVLCLLPLI
EPRYHALMAYLQGDEGASWPGVELALTLFSATPVERIAHRHQLYSSAGNLLPNELVHT
AERNGRACARDDAAYLRANETVFRYLSGADTMSLPMALTELAQWRPTSHIGDALRHGA
WAACAEQIATFCFGGGSRAMPTPLLLLQGGDGSEALIVQLASEAGRPALTVNLRALPD
DATDAWPLLLAVLREARLHGGILVLHHVAEGVSRHGPLLEALEPRLARHGQPIVCLLP
THGTAEAFASLPKLRLTMPPRMHEDNVRLLQAGLGTSSNGWDLAGLLKRTRVNPDTLT
ATLQEAQGYRALRGAQAPLAQADLCQALRVRGQQHFGQLAQRMQPQRTLDDLIVSENL
REQLHEILAAIRQRDAVLTRGFARKVGYGTGISALFYGESGTGKSMAAEVLAAELGLD
LIRVDLSTVVNKYVGETEKNLSQIFDLAVADTGVLLFDEADALFGKRSEVKDAQDRHA
NIEVSYLLQRLEQYPGLVVLTTNNRAHLDDAFTRRLTFITRFEIPNAVLRERMWRAIW
PEQVAVDQEVDFTRLSAVTELTGAGIRNVALLASWLAAEQDRSVNWVDIARAVRRELS
KTGRIMPQL"
misc_feature complement(<8829..9629)
/locus_tag="RBRH_00956"
/note="proteasome ATPase; Region: pup_AAA; TIGR03689"
/db_xref="CDD:200312"
misc_feature complement(8658..9056)
/locus_tag="RBRH_00956"
/note="ATPases associated with a variety of cellular
activities; Region: AAA; smart00382"
/db_xref="CDD:197690"
misc_feature complement(8661..9041)
/locus_tag="RBRH_00956"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature complement(9009..9032)
/locus_tag="RBRH_00956"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature complement(order(8727..8729,8856..8858,9006..9029))
/locus_tag="RBRH_00956"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature complement(8853..8870)
/locus_tag="RBRH_00956"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature complement(8691..8693)
/locus_tag="RBRH_00956"
/note="arginine finger; other site"
/db_xref="CDD:99707"
gene 10849..10962
/locus_tag="RBRH_00955"
/db_xref="GeneID:9985726"
CDS 10849..10962
/locus_tag="RBRH_00955"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027679.1"
/db_xref="GI:312794757"
/db_xref="GeneID:9985726"
/translation="MRQYARFLQISQHYLALHLGKLNNFVTLYCEGNEMEL"
gene 11475..12218
/locus_tag="RBRH_02931"
/db_xref="GeneID:9985725"
CDS 11475..12218
/locus_tag="RBRH_02931"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027680.1"
/db_xref="GI:312794758"
/db_xref="GeneID:9985725"
/translation="MPKTQNRGKMMMFLARVLADPAVLTKFQVDQDNLTATSIPIYYN
TLEGNQPKTNKNTIHLWQTDGWDTSVQELKTFKIESDQASGPQSFDIDLANVNYLIGY
AVGEGKGAVVTTQRLETQGGGKWNVIPAPDTEALSFNMTNVNTTTVSYSFRIPLGTSA
EANGDWIGVWKGSTGSYLYDKEKPPISLKSISIDDSYGNDRLTLSNGQQFTSGASYML
GYFKSGYNSSNPTESVRSTLAAIVKFKGP"
gene 12337..13740
/locus_tag="RBRH_02930"
/db_xref="GeneID:9987241"
CDS 12337..13740
/locus_tag="RBRH_02930"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027681.1"
/db_xref="GI:312794759"
/db_xref="GeneID:9987241"
/translation="MMVLLAKFLADHPVLTQFNVDEQHLTATSIPIYYNTLEGNQPNT
YKNTVYLWQVDGWEVPPSIPNLIKEPLITADNPSAFQYFNVELTRANYLIAYAVGEGR
DAVVTTQRLEPLGDGQYKVTPPPEEEALSFKITDVNPTTVSYSFRMPSGTSAKDDGDW
IGVWRDPKVSDLYDNAREPIYFSPVEDDDSNGNGSLTLPHAQQFEIGVNYMLGYFKSG
YNTQNPLRTTLAAVISFKGPPRPSLTQFSVDSINIDATEIDFHYKTLDGNQPNTYKNT
VYLWQTEGWTVPSTTDKKHSITSDSVEGSQNFSVELGQANYLIAYAVGLTANAVVTTQ
RLEYQKDSKRYKIIPAPSDEALSLKVTHVNTTTVSYSFRTPAGTSAKANGDWIGVWKG
TTVSKLYNDAEEPLGLKPISIDDSHGNDSLTLPDSQQFASNTSYMLGYFKSGYDQNKP
NEPVRTTLAAIVHFRGP"
gene 13783..14586
/locus_tag="RBRH_02929"
/db_xref="GeneID:9987240"
CDS 13783..14586
/locus_tag="RBRH_02929"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027682.1"
/db_xref="GI:312794760"
/db_xref="GeneID:9987240"
/translation="MIISPGRFHSQLTSITVEPEDIKSTIIPFRYDTLPGNQPKANKN
IVYLWQTNGEEVPFHEDPQRKSMLIDSNRADNLINFDELSLAKDSYLMAYAVANSVNA
VVTTLLIKGVGDGRFDVSLPEDKLAFSVAQVGSTSLCYQFCVPRGMSPKDDGDWVGLW
EGSTVSELYYKKPLFSSPVLSDINSGYGGLTLPEGQNLMSGIEYILGYFKSGYKKDKK
IDKEGGSKEEDKKDEQAVESKEEDKNNQGGGKEDPLQTTLAAVTIFTGP"
gene 14706..15407
/locus_tag="RBRH_02928"
/db_xref="GeneID:9987239"
CDS 14706..15407
/locus_tag="RBRH_02928"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027683.1"
/db_xref="GI:312794761"
/db_xref="GeneID:9987239"
/translation="MDEPSSQATSITQFTVEAEDIKPRIIPFRYDTLPGNQPKTNKNT
VYLWQTKGEDVLVKITPFRSQSISRNEPNASTNFTGLSLSKEPYLMAYAVDDNVKAIV
ATLLIEGVGDGRFSVSFPTDSLSFSVTQIGPASLSYRLCVPRGMNPKDDNDWIGLWEG
STVSELYYKRPRCFSPVPIHTNKGNGVFALLEGQNIENGIEYTLGYFKSGYDEQNPLQ
TTLAASTTFKWEGSE"
gene complement(15465..17867)
/locus_tag="RBRH_02927"
/db_xref="GeneID:9987238"
CDS complement(15465..17867)
/locus_tag="RBRH_02927"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027684.1"
/db_xref="GI:312794762"
/db_xref="GeneID:9987238"
/translation="MKRLSRSVRQKIDWRAAVSKIDRLRLSFKAEQFDGHALLRECSQ
LFHQRVLADLDQLIHRLAKRASRPRLIKRLVIDLGVLDASDWKEQWRTRLLQRVEQAL
IEELARAEQGRANEDSTTPHDGFQAWIRWLHTGVGTAPDAPSLSAMMNLQAHPAMPAA
PVTQLTESAMRTVRTRLQQWLQANPVLHPAVRHRLAQLCAIPALQDIWVAYEAQHPEP
AKLDSLARAVQGIPLTTYSPDAIAGSNRPAPEAVPVQQGNLWPDASMRAPDMAYRMNP
AIVPNEPAGFSAGFGLLWPLLPGVFRALERNKPAADTDNALLWAALETSQSPPAMPTS
SAMQITEKAIRTARTRLQRWLQAKPVLRPAVRHRLAQLCAIPALQDIWAAYEAQHPEP
AKLESLPRTVQDIPLTTYFSDAIAGSNRPVPEAVPAQQATIWPDASVRAPDIPYRINP
AIMPSEPAGFSTGFGLLWPLLPGVFRTLERNKPVADTDDALLWAALESFQSHPAMPTS
SAMQVTEKAIRTARTRLQRWLQVNPVLHPAVRHRLAQLCAIPALQDIWAAYEAQYLEP
AKADSLARVAQDIPSATDLPDAIAGSNRSAPEAVPAQRTVRPDASVPPDTPDRINRSR
DRSTAFLLAELAVLSAGLVLLWPMLPGLFRTLALLDDTNHFIDASAPLIAAGWLDELA
WGDDTVAEWRTPVNKLLCGVALDAMLPDWQPDPTVRAQLNGWLAALPSRLPGLHRCGV
TDVRQLFLQRPGILTRQPNKRWTLQVEPHAADVLLHAIPWPFEQVWLPWCNDSFCVEW
RR"
gene complement(17830..19569)
/locus_tag="RBRH_02926"
/db_xref="GeneID:9987237"
CDS complement(17830..19569)
/locus_tag="RBRH_02926"
/EC_number="2.1.1.-"
/codon_start=1
/transl_table=11
/product="methyltransferase"
/protein_id="YP_004027685.1"
/db_xref="GI:312794763"
/db_xref="GeneID:9987237"
/translation="MLETQLQTDEAVQDTAATALAPFVSTYDRLPYTSYPFEQTHPGA
LAALAGLFGLAAPPVRTARILELGCAAGGNLIPLAAEFPESVCVGIDLSPVQIEDGQQ
RIVHSGLRNVRLERRDLLELPGTLGLFDYIICHGVYSWVPPAVRAAIMQICQQHLAPD
GIAYVSYNVLPGWRQRQAIRDALLWHISADAEPAQQLEQLRAMLSFLRTHASSDSMYG
SAVCAIIDDLAQRSDPYLMHEYLAATNAPCLFSEFVQAAKGLVFLCEARLTTMLPELS
APERAAAIRAWTGDRLLANEQMSDLVSGRPFRESLLVHDHRTIERTLRATHMDKLHVV
LCGSYRFEQENDAWVLHAPQGQYRTSDPIVQAALKTLILRYPASSTLDELSAAAVGPG
ISEPVRAAIRDALFYLVVGGLAIARTEPVCAQSASTLECAALEDKLDRTFCCASALAR
SDAAAGARATANLLHRPVQLTAIDILLLPRLTGDMSIAALLTALSGAVEEGLLTFAEH
GDVSLRELLIARLRHYARAALLVAQANDEPGGHWQDAEHGQVRAMTLSGEASSTAGQS
INEAIVSFSPPEN"
misc_feature complement(19027..19383)
/locus_tag="RBRH_02926"
/note="Methyltransferase domain; Region: Methyltransf_31;
pfam13847"
/db_xref="CDD:206018"
misc_feature complement(19069..19383)
/locus_tag="RBRH_02926"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cd02440"
/db_xref="CDD:100107"
misc_feature complement(order(19165..19167,19213..19221,19294..19299,
19351..19371))
/locus_tag="RBRH_02926"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
misc_feature complement(18628..18882)
/locus_tag="RBRH_02926"
/note="Predicted methyltransferase regulatory domain;
Region: MethyTransf_Reg; pfam10119"
/db_xref="CDD:204401"
misc_feature complement(<18418..18768)
/locus_tag="RBRH_02926"
/note="Predicted regulatory domain of a methyltransferase
[General function prediction only]; Region: COG4797"
/db_xref="CDD:34406"
gene complement(19659..21437)
/locus_tag="RBRH_02925"
/db_xref="GeneID:9987236"
CDS complement(19659..21437)
/locus_tag="RBRH_02925"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027686.1"
/db_xref="GI:312794764"
/db_xref="GeneID:9987236"
/translation="MESNKNPDAEKEVNEEGSAVEDPWSLPKLKSCFEAKHVPRQEHF
DAILDGLSKCFKAIGIDSEGKPELPENGLYLNKLPNDNYQLSVYLDEKRSMTSKTGSV
AVKVDQNRRIGSNDKGLKCIFKDELKGEKNKSGVTMLALQAGYGIEVTKVSVGGDNKR
VQLKIKSKDALVLDKKEGLGLKCKENSGFKLDSTLQLDIFEGKGLVIPDEGNNQNKFS
VQLDKIRGVKFNGGLSLNLDAESHFEDISKGLCLKQSDIFSKEVFEDLGKESLKKIYN
LLRSVFDENGVPFGSKVKDFLWADAVCGRYDNYRSNVGWFSVLTRNEDSKKNSLMFLD
QEERKDIGEIVGNSIVVLDNKLVGIGVCEEEPVFYSVDISTTRYRDEKIKLEPKSCPE
TCFRGPLCFSSDGSRVIFLDGDKKDVSVYYFSDAADDDGGGDNEGDGDVKKEYEKSND
FSSNDGLPPSVVPTCVTLSGNGKFAAVGDKEKIYFFKEESGKNWTKEEHECELPHSGL
AIGENADYFAAIEENTIGIYRIKRGNSAIQSIDKVQTLNYSARSISMKVIENLEEKKE
QYLVAIKAANDESSPLGMVFKGSVIV"
gene complement(21618..22487)
/locus_tag="RBRH_02924"
/db_xref="GeneID:9987235"
CDS complement(21618..22487)
/locus_tag="RBRH_02924"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027687.1"
/db_xref="GI:312794765"
/db_xref="GeneID:9987235"
/translation="MNSDDENGMPQNTLVRNSPLRDRIAELKGYFQAGQVPTEADFSE
LLDLLQEACQAVGAVDRNPGAGLQLSPPSTNLDGPLKLSVKCDGRTTELGAEQEGSKA
LKLKTNPDGALQVSDDGKLQLVFSSELEGEGLLQIQTGPGLEIMRSMGKETLAMKLQE
DKGLRFDSTNGDSVLIHCGPAIKIDNGPLEVVLGEGLQWNDQDKNLELNLAKDSGLIF
NGDNAVDLLINPEEDNVIEKIEENGQNTLRVKKDTLLCDVDTFRKLDKDTEGRLILKD
IYQLLCKAAQDDT"
gene complement(22484..24166)
/locus_tag="RBRH_02922"
/db_xref="GeneID:9987234"
CDS complement(22484..24166)
/locus_tag="RBRH_02922"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027688.1"
/db_xref="GI:312794766"
/db_xref="GeneID:9987234"
/translation="MTLQEAMRRILDARLEVKIADLKKRFGTGRKPSEGDYVLLFNVL
EALCDALDMAQDLTKVVPGNGLRLEQDRLALNLEAQGGLKINASAPYLFADFDGGTCL
AADDNGIYVKCRPVLHDGEGSLSVQAGFGVRVETVGGVEKVVPQGVNQPVGGIRATED
GLRVEAAGSGLTIEEGLALMCGKGMSAEQGLQIVLAKSTALALDADGLRVCTGKGNAL
QIDENGQLTLNPKVSVSTFEKMSFAERQEIWKLLEATAQPAAIGKLRILSQSEDVHLN
GILNDQEKIELAKVYFVPAASEQPVQAVTGDLASVIVQLKEAFQTEKLPCPEHYVSWF
NVLEALFDALGMTQDLTKVVPGDGLRLEQDRLALNLDKKSGLSIDQKSCLTVHLDDST
CLVADDKGIDVKCHPVLHDGQGCLAVQTGRGVTVEKVGGAEKVVPSNWQSKNQPVGGL
QATAQGLTVAVASGLTARGGLAVVCGGGVNVQDGLHVALAQDTALALDESGLHVHTAE
GNALRLNGSGQLTFDPGALVSVETFEKMPLAQRQEIWRILVRAGQEKEDELT"
gene complement(24219..25907)
/locus_tag="RBRH_02921"
/db_xref="GeneID:9987233"
CDS complement(24219..25907)
/locus_tag="RBRH_02921"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027689.1"
/db_xref="GI:312794767"
/db_xref="GeneID:9987233"
/translation="MAWQYLRTGEQPHPAMLRFAGWILSTKGLDEKNRLQRQYQFFLP
FEQWIANGIAQAANVAKLLAFDRYTLKQASPGNVWGYQWPYLPDSRLNDLFDHWKKDL
TDCMVERSEDGAKELAIIDYLLGYFGVQQGLGVLRDKARFREFIQLQQGYLEHFCTLT
YNRANVQIGQISDLQKRIAARLGIGAELFALTRGDKLNNLPFYLIEYWLLLPPQTRKS
IQLGPASNAVIEFLDEQETEKKALALSFIKGADVPEIGQIFKMTVAGGSPPPDVSAYP
WAVVSNVKDDGGSITLSFDLQHNNQLYVDAEYILDGVSNKAWQLSCETLSEWMWGVDY
PLVYAADQSGLLDNQRKRCQIASSATAIQIGDTIAIPSNPNIPGDSIKVVVEQVNISQ
GTFVAKCGNGAQWPGTNGDGKTLRRCYVERSLPLTDQFSFSIGVVLNRDNDWFSPSSK
PSDVIEWVEQVVRDEVPCHIQSTVHWLNRSAFRSFGHAYNGWQNSGCPFGNEAYQLLE
LLSLSRLPDQPAGIGTLSLYKTDGDVHLNPDGTYQDEEAIKKNEVMYILTDKQY"
gene complement(25835..27112)
/locus_tag="RBRH_02920"
/db_xref="GeneID:9987232"
CDS complement(25835..27112)
/locus_tag="RBRH_02920"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027690.1"
/db_xref="GI:312794768"
/db_xref="GeneID:9987232"
/translation="MDDAEQEYDAIHFDSLWATALDTLRTLAGQQWTEFGEHDPGVTF
LQALTYNVADLAYRHTHPLKDLLTLNPADVQRREEKNRKRIFPLTFGPDWALTCSPVT
ENDYRRAILDLRSDEATQAEALSQGFYFMDAQLVREPFDLKQIYSYRYDENNRRFRFD
FNLPXNHSQLETNQFCLLGGYHLYVAKQRGIDEEEAKEALQTCLKNNRNLCEQVRRII
WLEPQDVDVQIDIELDDEWQDPVKTMAALYQQVDACISSPTMRTGARQLIEQGIPAEA
VYDGPRLQNGWITSIPVPVDYTQSRVVDISGLAQSLLALAGVDRMMKLQIGDIPSWTM
MIDPACYPVAWGDDPIASLTGNTGESPKVRLFKRGELQTIDPDALKQAIQDAQPSIVT
DTPTGVPIGRWRGNTYAPASNRIPPCYGLQDGY"
misc_feature complement(<26387..26563)
/locus_tag="RBRH_02920"
/note="transcription termination factor NusA; Region:
NusA; TIGR01953"
/db_xref="CDD:162623"
gene complement(27188..32053)
/locus_tag="RBRH_02919"
/db_xref="GeneID:9987231"
CDS complement(27188..32053)
/locus_tag="RBRH_02919"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027691.1"
/db_xref="GI:312794769"
/db_xref="GeneID:9987231"
/translation="MAAKKTLSPQESFILDQRDLAWHLETWRDYAALLPFDDPFAKPG
SFEKDDESWKKFFFPSDEAGDSVDPVAALLKAVAQPNGLLPSQQAFLVAFLASLNVPR
DLFNTIPARHRALYYRDELSVREKPAVPDQVMLSFTPSQPSLMLPAGERFSAGQDSAG
TPLEYRLDEDVWVNQAMLTDVCWYQSENHNDNPQIQHPATKRVVLDTLGQSATVWPNE
GVRLFSYDPQRDQTVVRGRVVASPVLAVAQGEREIEVMFDGVGGLMEGDQNLSAWMSG
EKGWVPLKRLPIIGMPPDAWKAVFVLQADQGAIAVPAGLDGFNDPVPLLKITCPLADI
PRVKQINVTVHNSTQVMMATDDSVAETGKKSTPFGEFPSLGSSLYLMSPDWCNKPDCT
LTITLNPAWTGLPTQNFHDWYQWDSVGGQNGESGYAIYGGGVPANNQAFTVKMTVANG
QSDGETVPLYDNQSSGDAPPPIGALLTFNEIETLTAPIIESTDPHDWKQYLRFELTGQ
DFGHAAYQNSLVAPQYKKTPTIIELHPPYTPRWTSLFVLYELSTTSQPTRHSLSPPSE
SGCAIASPVLAVAGGQRMIEVMFDASIGAREGLSAWVSGENRSWIPLQNSEEIDDDKK
ASFVLQASQGAIALPAGLDGFNDSMPLLKMMHSSAGIPGVTQINVTVLNSPHVLMATD
GGVTEIDKENKPFGDSPVLDSSFYLMSPDWCNKPDCKLTITLNPSWMGLPTQSFQSWY
EWDSVDGQDEKFGYAIYGGRVPENNQVFTVEMTVASRQPAMTSNLSDDGRLPLFEDKS
PGNASPPIGASLAFNAIDALTATIIGDTDPRHWDQYLRFKLTGQDFEHAVYQSSQNAP
LYKKTPTIIRLHPPYTPQWASLSVSYKLSTAALDTQYRLTPFGHCADDAPMARELGQP
ARQLMLGFSGIQPGQDLALYWKVRAANPDVLLSWDYLSQDKDKKSCWQTLDMQVHDKT
GKLSMSGLWRTTLPHDASHQDPAMPAGRYWVRAQFKPPAQHEHDGEQGGFAVSDDAVR
PSDFPWLLGLNVNCMTATLVNVEHIAADHLTTPLPADTVTRSVEPIEGLQTITQPWPS
EGGQPVEETGRFYQRIAQCLHHRGRALTWGDIRQLLTERYTEIHDVREAAPRVQDKDD
PNAHPLIQRLVVIPTPDQSDSGDRLRPAFNASRLKQMKQFILDRATLWLNLEIGNPAY
RDVPVAYTIDFTASTNPDQGYRQVAQALSAQYMPWANGSSPGEVRTGVTLDYYAMLAF
IERLPIVMRVKSLLLDGQARTVEANGLEALVLTFGERTSTLFGQPQQVKLPADYTLVG
NRVRVSHDGQYLAVDVTKSPDTPAIAIYGPDSQWRHIDLVAGQTVIFELTGPHACPGI
AYLRGTAVQFDLLNNQPFGIGPSFEVGIEKGTVTDLSVEGNGQFIAVAQEEGCLRFWT
LNNNTYQEGQRSPVTLPDGNGRPIDLNGGGTLPLVANYKDDTVVYVYSDVIHHPDKLV
PLESASSTVSTLSRNAQVIACAYQTDITINQIQNGIWQRAGKGISLAQPVTSVSLSDT
GYVLAAGTADGKQVEIWIGVNGPDPTLLQTLEAETGFGTSVSLSGNGLMLAMGGEQDS
ILLYRRTAESI"
misc_feature complement(27209..>27832)
/locus_tag="RBRH_02919"
/note="WD40 domain, found in a number of eukaryotic
proteins that cover a wide variety of functions including
adaptor/regulatory modules in signal transduction,
pre-mRNA processing and cytoskeleton assembly; typically
contains a GH dipeptide 11-24 residues from...; Region:
WD40; cl02567"
/db_xref="CDD:207648"
misc_feature complement(order(27209..27214,27230..27232,27242..27244,
27296..27301,27344..27349,27368..27370,27383..27385,
27440..27445,27479..27484,27500..27502,27512..27514,
27566..27571,27602..27607,27623..27625,27638..27640,
27716..27718,27746..27751,27767..27769,27782..27784))
/locus_tag="RBRH_02919"
/note="structural tetrad; other site"
/db_xref="CDD:29257"
gene complement(32105..32557)
/locus_tag="RBRH_02918"
/db_xref="GeneID:9987230"
CDS complement(32105..32557)
/locus_tag="RBRH_02918"
/codon_start=1
/transl_table=11
/product="baseplate assembly protein W"
/protein_id="YP_004027692.1"
/db_xref="GI:312794770"
/db_xref="GeneID:9987230"
/translation="MEDRMANGPQNQLGCGWKFPVQFECVSGKPKAAQVMMSRDADNI
KESLQVLFSTQPYERVMRAGYGCDLQAFVFENISDGLRTEIRQMISDAVQTYEPRGTL
VSIDFRPDSNSPWTLNIDIAYRIPLNNTVQHVGGRLNFGSPQGGWLAQ"
misc_feature complement(32171..32449)
/locus_tag="RBRH_02918"
/note="Gene 25-like lysozyme; Region: GPW_gp25; pfam04965"
/db_xref="CDD:203133"
gene complement(32566..34329)
/locus_tag="RBRH_02916"
/db_xref="GeneID:9987229"
CDS complement(32566..34329)
/locus_tag="RBRH_02916"
/codon_start=1
/transl_table=11
/product="VgrG protein"
/protein_id="YP_004027693.1"
/db_xref="GI:312794771"
/db_xref="GeneID:9987229"
/translation="MMALPFASKKFDIQVQGQPLSKLGLTVIEAEVQYTVNRIPMARL
TCRVDIEDPANSWASLSQIDKAWRPAHAVKISYTDETGTRVPIFDGMVARPLNPSYVQ
RQLTCQLEVVHELQKMANSHRSQVLTQKGEKLTDAQALQKLFKEHGIKVKKVDGMTVS
HAQLIQWSCSDWAWLMSRISAYPVWLIGAPEQSVSILKPDIGQAPQGLVLKAAKQNAG
IELRDMKYRRDSRRLPSQLSVNYWDVAQQKSRSVKAKSPAVGSGVFKPLTYAASDAMH
WTLNAGLPLSETEAQSFADARLLGCQLAGTQAEFTVDWSEATAKLAPGQTLELSGYGT
FDGKGLIAEVRHQWIGAGQGKTIVTTGRPNAVIGLQVPEIDAPLMPRVQGMAPGVVVK
PGREKDPTGWGCMAVRVPGLGGTPGQEPPVWVRPGMAYASKGSGLCLYPEADDEVMLA
FLSDDPRFPVIVSAVHNPKNKAPFEPSEKNEQKGLVLAKDGKTQFQWLFDIKDGGTLT
LEAQKTALVLSKASLRLHGEEAFALDAKKITVEAKEGLTLKNGQSEMKMGGTSLSAKS
QTLSLQGSAKADLKGGQVNLG"
misc_feature complement(32791..34257)
/locus_tag="RBRH_02916"
/note="Rhs element Vgr protein; Region: vgr_GE; TIGR01646"
/db_xref="CDD:162461"
misc_feature complement(33292..>33963)
/locus_tag="RBRH_02916"
/note="Phage late control gene D protein (GPD); Region:
Phage_GPD; cl15796"
/db_xref="CDD:210196"
misc_feature complement(32905..33165)
/locus_tag="RBRH_02916"
/note="Phage-related baseplate assembly protein; Region:
Phage_base_V; pfam04717"
/db_xref="CDD:203075"
gene complement(34326..35087)
/locus_tag="RBRH_02915"
/db_xref="GeneID:9987228"
CDS complement(34326..35087)
/locus_tag="RBRH_02915"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027694.1"
/db_xref="GI:312794772"
/db_xref="GeneID:9987228"
/translation="MSGSDQSLKKLKMTPYLLDKGGALKNLAGPFEVLYNPESLTIGY
GANFREESLADSSNTRVKFGAVTPSTLAVELILDSSLPDSKTSVDEQLSSLYITFFRI
NGAVRTPNIVKVEWGNFGWAGQMKFTGWMTNMTVTCSLFDRSGAPQRANLSVQFLEEL
ELDMGSKGGSGGNVSQGGGQGGSSGSTGQVSMLYEGGPVPDGATLAHIAEGAWSVPSQ
TTASDYLSYARENDLDSLEALTPGQFLRVPGSRGA"
gene complement(35084..35314)
/locus_tag="RBRH_02914"
/db_xref="GeneID:9987227"
CDS complement(35084..35314)
/locus_tag="RBRH_02914"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027695.1"
/db_xref="GI:312794773"
/db_xref="GeneID:9987227"
/translation="MDGVGGMIEIHELIIEARIGTPGTRSVPVTALGTAASPIPPREA
APCEARWVDAIVRQVIERLRDEWRSDVHGGSV"
gene complement(35293..35835)
/locus_tag="RBRH_04077"
/db_xref="GeneID:9987226"
CDS complement(35293..35835)
/locus_tag="RBRH_04077"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027696.1"
/db_xref="GI:312794774"
/db_xref="GeneID:9987226"
/translation="MSSAILSTAEAMAKAPITGDFYMHSHRFLVQVFAKTNWRFTGNL
QALNVLPTVVDFRFQRISGLGRTIQTQMYHQGGDPINQIHLPKELTQENIVLERGVTT
LSPLTTMFIDTMRQFKSRYLVVAILLLDSSSLPLCSWICMDALPVKLQWGELDANSNT
VLLNTMELACRDVQWMGLVA"
misc_feature complement(35314..35691)
/locus_tag="RBRH_04077"
/note="T4-like virus tail tube protein gp19; Region:
Phage_T4_gp19; pfam06841"
/db_xref="CDD:148448"
gene complement(35832..37238)
/locus_tag="RBRH_02913"
/db_xref="GeneID:9988051"
CDS complement(35832..37238)
/locus_tag="RBRH_02913"
/codon_start=1
/transl_table=11
/product="tail sheath protein Gp18"
/protein_id="YP_004027697.1"
/db_xref="GI:312794775"
/db_xref="GeneID:9988051"
/translation="MSFTNFGVRTVHHEQPGVSFNFQEEARTTTPADTTVPLFAGYTK
KDPESQDPEFKCPKSPVLLNTFEDFTQVFGGFPLSGNPLVPLTQEAAFYYTVRHYFDN
GGSACYGVSLGSYTDLPEGDDYYARQEIADCITRIDWNHLLEQALDATLLAVPDMVML
SAPRYYQASDSGRLSNQEEQSEDVDRWMSVWQKLLSTTQSHRQVFVVLDAPDNPKLVR
QCLNGLASMDEAQRARGAVYWPRLQTNYYVDYDDGHQGIRRQIVVPPSGAVVAAIGKI
DRDRGIWKAPANIELTQVIRPNYRNWRDVLLSEPPLFDENKISINLIRSFVGRRVRVW
GCRTLVAPPFPDRWRYVQVRRTLTYIETTLTNIGRYTMFEPNTPITWTTLKSLARAWL
RDLWLAGGLAGAQESDAFQVLLGLGESMTTEDIRSGRLILIAKLAMQYPAEFIELRVL
FQTSSDAVLTESTEKATS"
misc_feature complement(35841..>36542)
/locus_tag="RBRH_02913"
/note="Phage tail sheath protein FI [General function
prediction only]; Region: COG3497"
/db_xref="CDD:33300"
gene complement(37287..38441)
/locus_tag="RBRH_02912"
/db_xref="GeneID:9987225"
CDS complement(37287..38441)
/locus_tag="RBRH_02912"
/codon_start=1
/transl_table=11
/product="tail sheath protein gp18"
/protein_id="YP_004027698.1"
/db_xref="GI:312794776"
/db_xref="GeneID:9987225"
/translation="MGCCARLRQCRIGTGVFENGGGPCYILSINNGQTVTPSSDIESA
ILAYPDISLLCYCGNALSEPNNVKTVFRSLIDPQKNLGYFVLTDSNLDNVKNVDFGNK
EQVAIYYPALQMKYQMTIPDDRQIALSGNFKSFSSAGSPLPQTLESLIDHKPKNDAEQ
RDKEELIGKIRSLSAIPLRASGVMAGVYARTDALRGVWKAPANVTLSSVKGTVWPCPT
PQQVLQKAPQPVKVTDEDQEKLNPVGINAIRYFTNQQAYVVWGARTQNGTDDNPDKRW
RYIPVRRLFNAAERDIKAAMRQVVFEPNSQPTWEKVRAAIDTYLYAIWGKGGLQGAKP
EEAYFVQVGKNVTMTDADIRAGKMIVKVGIAAARPAEFIILQFSQKQQDE"
misc_feature complement(37296..>38162)
/locus_tag="RBRH_02912"
/note="Phage tail sheath protein FI [General function
prediction only]; Region: COG3497"
/db_xref="CDD:33300"
gene complement(38789..40000)
/locus_tag="RBRH_02911"
/db_xref="GeneID:9987224"
CDS complement(38789..40000)
/locus_tag="RBRH_02911"
/codon_start=1
/transl_table=11
/product="tail sheath protein gp18"
/protein_id="YP_004027699.1"
/db_xref="GI:312794777"
/db_xref="GeneID:9987224"
/translation="MAYDWPGVYVEEERGLSLAITSGATAVPVIAYDPDGSTNKDKDK
AVNKDLISAPARIDSWMAFMNLPGVQTVANAEAENPPKKRLLDCPLYIALKTYFDNGG
GYCYVCPTNGEGNDKDTLFKTVPELDDVTLIVQAGAKLSEKVFTPGTGLCAEGKSRFA
ILDGPLEPLKGDAKDMDTYTNTSYAAAYYPPLRAEWATYVKEDKNAKVPVTLDIPVSA
AVAGAYCSVDRDRGVWKAPANVQLQGRVVPKFVVSDAIQGIYNQYTKPLNIIRCFQTG
VPLVWGARTLADDSEKERWRYVPVRRLFGAAEKDIKRAMAFAVFEPNNQPTWEKVRAA
IDAYLYGIWKAGGLMGTKPEEAYFVRLGLGVTMTQAEINEGKMIVQVGMAPVFPAEFI
ILRFTQDMHAA"
misc_feature complement(38801..>39544)
/locus_tag="RBRH_02911"
/note="Phage tail sheath protein FI [General function
prediction only]; Region: COG3497"
/db_xref="CDD:33300"
gene complement(40054..40503)
/locus_tag="RBRH_02910"
/db_xref="GeneID:9987223"
CDS complement(40054..40503)
/locus_tag="RBRH_02910"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027700.1"
/db_xref="GI:312794778"
/db_xref="GeneID:9987223"
/translation="MATTADQIATDYPIPVYRFKVTLGKDEMAFSNVSGLDLGFETIT
YKDGAGHVYRMPGQSSELNITLRRGVIKGKNELYDWISKISKNLIDKRDLSISLTDEA
GTALLVTWNVTNAFPSKLSGPSFDATSNEVSIEELTLVADRLTMTFH"
misc_feature complement(40069..40461)
/locus_tag="RBRH_02910"
/note="T4-like virus tail tube protein gp19; Region:
Phage_T4_gp19; pfam06841"
/db_xref="CDD:148448"
gene complement(40550..40654)
/locus_tag="RBRH_02909"
/db_xref="GeneID:9987222"
CDS complement(40550..40654)
/locus_tag="RBRH_02909"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027701.1"
/db_xref="GI:312794779"
/db_xref="GeneID:9987222"
/translation="MSWARLSADQDIAERHGMSFPLIRNTRQSNGTGS"
gene complement(40651..40752)
/locus_tag="RBRH_02908"
/db_xref="GeneID:9987221"
CDS complement(40651..40752)
/locus_tag="RBRH_02908"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027702.1"
/db_xref="GI:312794780"
/db_xref="GeneID:9987221"
/translation="MLSRGRVPIFEALKLDLLSRSIHSLNEATYYRR"
gene complement(40924..41211)
/locus_tag="RBRH_02907"
/db_xref="GeneID:9987220"
CDS complement(40924..41211)
/locus_tag="RBRH_02907"
/codon_start=1
/transl_table=11
/product="transposase"
/protein_id="YP_004027703.1"
/db_xref="GI:312794781"
/db_xref="GeneID:9987220"
/translation="MTRAHAVEALEEAFARYEQSEIVNTNQGSQLTANAFIEAVLGRG
IRVSMQSKKVGATMCCRTRVAKNYRKMSEQPRPLPSSITRINCTKLFFALN"
gene 41295..41528
/locus_tag="RBRH_04076"
/db_xref="GeneID:9987219"
CDS 41295..41528
/locus_tag="RBRH_04076"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027704.1"
/db_xref="GI:312794782"
/db_xref="GeneID:9987219"
/translation="MRCCSTARCVSAGRTRFPAQIHYEQRYRERAIQRLHRQAAEFVF
SFNLYKAFLRNRLIFLLISSKPVRLSKATSGRF"
gene complement(42040..42456)
/locus_tag="RBRH_02906"
/db_xref="GeneID:9988050"
CDS complement(42040..42456)
/locus_tag="RBRH_02906"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027705.1"
/db_xref="GI:312794783"
/db_xref="GeneID:9988050"
/translation="MGKPIVVTGAMLVFPVQIQDVLFVPPIPPRPLSGSGFAKVKGRP
VCQLGDEKKIIVTASYQTASASIPGVAILTVTQAETAKRTKSPLPVIIAPSWDILCTI
TVPAQIPGTPPVPQPHPPVSGKATVMANPNINVIAN"
gene complement(42537..42797)
/locus_tag="RBRH_02905"
/db_xref="GeneID:9987218"
CDS complement(42537..42797)
/locus_tag="RBRH_02905"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027706.1"
/db_xref="GI:312794784"
/db_xref="GeneID:9987218"
/translation="MSAARVFAASLDKLDANVSLLLSEIDAGGLSELSVRATYAAMAR
HLPAIHHDPFDWLLVAQALFEPLHLLISDGYLLKYTDFVIPL"
misc_feature complement(42555..>42773)
/locus_tag="RBRH_02905"
/note="PIN (PilT N terminus) domain: Superfamily; Region:
PIN_SF; cl14812"
/db_xref="CDD:209904"
misc_feature complement(order(42579..42581,42633..42635))
/locus_tag="RBRH_02905"
/note="putative active site [active]"
/db_xref="CDD:189022"
gene 43072..43233
/locus_tag="RBRH_02904"
/db_xref="GeneID:9987217"
CDS 43072..43233
/locus_tag="RBRH_02904"
/codon_start=1
/transl_table=11
/product="transposase"
/protein_id="YP_004027707.1"
/db_xref="GI:312794785"
/db_xref="GeneID:9987217"
/translation="MALGAVKGERTLVELAHPFNVHPNQFTEWKRQLQERAADVFSNV
ASACPRISG"
gene 43262..43393
/locus_tag="RBRH_02903"
/db_xref="GeneID:9987216"
CDS 43262..43393
/locus_tag="RBRH_02903"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027708.1"
/db_xref="GI:312794786"
/db_xref="GeneID:9987216"
/translation="MRNVDLWYLGAEHTALNKINLEIRHREIVAEADITRLILKLSE"
misc_feature 43265..>43351
/locus_tag="RBRH_02903"
/note="phosphate ABC transporter, ATP-binding protein;
Region: 3a0107s01c2; TIGR00972"
/db_xref="CDD:188099"
gene complement(43613..45049)
/locus_tag="RBRH_02902"
/db_xref="GeneID:9987215"
CDS complement(43613..45049)
/locus_tag="RBRH_02902"
/codon_start=1
/transl_table=11
/product="Type I secretion outer membrane protein"
/protein_id="YP_004027709.1"
/db_xref="GI:312794787"
/db_xref="GeneID:9987215"
/translation="MIHIPTVPRHLLSLVCAAVLLAGCVNARRQSLPAVKLPAHWSAY
DAAGATTKTPCSAVSDTSEPCATALIPTDWWRGFGDPVLDRLIDDALAVNNDLAAAAI
RVYRAQLQAGLVATNLAPTATLGGNGRVSRTPDSRQTSHASNLYGSLSYELDLWGKLA
AQRDVARWKAAATQADHDAARLSLIGTIAALYWQIGYLNQQIALGNANIAYAQRTLAL
VRTRHAAGAVSGLDVAQAEQSLSVQRAAQMQLIQQRTENRHALAILFDRPPQARAAEP
AALPHRVLPVVPAGLPADLLRRRPDLRAAECRLRESLANVDVARTRFYPSFTLTGSVG
TSSASLERVLSNPVAALSLELALPFIQWNTMQLQIKVSRTQYEEAVVNFRQQLYTALG
EVENALSARVQLEREGEQRTLSLLQAQRAEALARARFVAGATSVQPWLDEQQRLRDAQ
STSALNRLNQLNNQMNLYKALGGGDDAF"
misc_feature complement(43628..44833)
/locus_tag="RBRH_02902"
/note="efflux transporter, outer membrane factor (OMF)
lipoprotein, NodT family; Region: outer_NodT; TIGR01845"
/db_xref="CDD:162557"
gene complement(45062..47044)
/locus_tag="RBRH_02901"
/db_xref="GeneID:9987214"
CDS complement(45062..47044)
/locus_tag="RBRH_02901"
/codon_start=1
/transl_table=11
/product="Macrolide-specific ABC-type efflux carrier"
/protein_id="YP_004027710.1"
/db_xref="GI:312794788"
/db_xref="GeneID:9987214"
/translation="MTMTWPLLQLVGVTRRFPAGDRDVVVLKNVSLTLNAGEFVAIVG
ASGSGKSTLMNILGCLDHPSEGSYRVDGCETHELDSDELARLRRERFGFIFQRYHLLP
HLSAAANVEMPAVYAGSVPAARHARAKRLLARLGLAQRAGHRPSQLSGGQQQRVSIAR
ALMNGGEVILADEPTGALDSKSGQDVIRILQELNALGHTVIIVTHDEHIAAHARRIIE
IRDGEIVADRPNTPVTDGALGPVCATVDARAISPPPPTRSWSASAGRFAEAFRMAWLA
LASHRLRTILTTLGIIIGITSVVSIVAIGEGAKRYMLAEIASLGTNTISFYPGRDWGD
NQAHTIQTLMPADVTALAEQYYVDSVTPETSRSLLLRYRNIDVNALVNGVSEHYFQVR
GIKLTQGVGFGPDGVRRQAQVVVIDPNTRRKLFGADSNPLGEVILVDNLPCVVIGVTA
DKKSAFGDVKSLNVWVPYTTASGRLFGQRHFDSLTVRVRDGQPSTTAENSLVKLLMQR
HGRKDFFTYNVNNVVKTAEKTGQTLTLLLSLIAMISLIIGGIGVMNIMLVSVTERTRE
IGIRMAIGARQSDIMQQFLIEAVMVCLIGGAMGIVLSFGTRFVFALFVTQWKMVFSIG
SIVTAFLCSTLIGVVFGFIPARNAARLDPIDALARD"
misc_feature complement(45065..47038)
/locus_tag="RBRH_02901"
/note="macrolide transporter ATP-binding /permease
protein; Provisional; Region: PRK10535"
/db_xref="CDD:182528"
misc_feature complement(46433..47023)
/locus_tag="RBRH_02901"
/note="This family is comprised of MJ0796 ATP-binding
cassette, macrolide-specific ABC-type efflux carrier
(MacAB), and proteins involved in cell division (FtsE),
and release of liporoteins from the cytoplasmic membrane
(LolCDE). They are clustered together...; Region:
ABC_MJ0796_Lo1CDE_FtsE; cd03255"
/db_xref="CDD:73014"
misc_feature complement(46892..46915)
/locus_tag="RBRH_02901"
/note="Walker A/P-loop; other site"
/db_xref="CDD:73014"
misc_feature complement(order(46526..46531,46757..46759,46889..46897,
46901..46906))
/locus_tag="RBRH_02901"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:73014"
misc_feature complement(46757..46768)
/locus_tag="RBRH_02901"
/note="Q-loop/lid; other site"
/db_xref="CDD:73014"
misc_feature complement(46574..46603)
/locus_tag="RBRH_02901"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:73014"
misc_feature complement(46526..46543)
/locus_tag="RBRH_02901"
/note="Walker B; other site"
/db_xref="CDD:73014"
misc_feature complement(46508..46519)
/locus_tag="RBRH_02901"
/note="D-loop; other site"
/db_xref="CDD:73014"
misc_feature complement(46433..46444)
/locus_tag="RBRH_02901"
/note="H-loop/switch region; other site"
/db_xref="CDD:73014"
misc_feature complement(45533..46228)
/locus_tag="RBRH_02901"
/note="MacB-like periplasmic core domain; Region:
MacB_PCD; pfam12704"
/db_xref="CDD:205030"
misc_feature complement(45086..45391)
/locus_tag="RBRH_02901"
/note="FtsX-like permease family; Region: FtsX; pfam02687"
/db_xref="CDD:202350"
gene complement(47041..48321)
/locus_tag="RBRH_00040"
/db_xref="GeneID:9987213"
CDS complement(47041..48321)
/locus_tag="RBRH_00040"
/codon_start=1
/transl_table=11
/product="Macrolide-specific efflux protein macA"
/protein_id="YP_004027711.1"
/db_xref="GI:312794789"
/db_xref="GeneID:9987213"
/translation="MRTMWPVPFGIIVRIVLHSHARICLKIPPYMKKNFRHGRAAVVG
VVAIVLVAALSLHFFARDKHAQYLSAKVERGDLENAVLATGTLQAFKQVDVGAQVSGQ
LKSLKVKLGDKVTQGQWLAEIDPVLSYNALRQAQANEQNLAAQKRAMAAQLMQAELAF
RRQQQMLPEDATSRQDYEAAKSALEVQRANLASLDAQIRSARIHTETAQVNLGYTRII
APMDGEVVAIVTQEGQTVIAQQQAPVILKLADLDTMTVKAQVSEADVVRVYPGQNTYF
TILGEPDKRYYGKLRAIEPAPQNFLDTQGTFGVMGGGASKPNTAVFYNALFEVPNPGH
RLRIAMTAQVSVLLGTARNALIIPVAALGAKDKDGLYTVRVLGAGDKLETRKIRIGIN
NNVKVEVLAGLKAGERVVIGDASDTGNTASDVGV"
misc_feature complement(47080..48162)
/locus_tag="RBRH_00040"
/note="macrolide transporter subunit MacA; Provisional;
Region: PRK11578"
/db_xref="CDD:183211"
misc_feature complement(<47944..48048)
/locus_tag="RBRH_00040"
/note="Biotinyl_lipoyl_domains are present in
biotin-dependent carboxylases/decarboxylases, the
dihydrolipoyl acyltransferase component (E2) of 2-oxo acid
dehydrogenases, and the H-protein of the glycine cleavage
system (GCS). These domains transport CO2, acyl; Region:
Biotinyl_lipoyl_domains; cl11404"
/db_xref="CDD:213122"
misc_feature complement(<47425..47676)
/locus_tag="RBRH_00040"
/note="HlyD family secretion protein; Region: HlyD_3;
pfam13437"
/db_xref="CDD:205615"
gene complement(48514..48771)
/locus_tag="RBRH_00039"
/db_xref="GeneID:9985363"
CDS complement(48514..48771)
/locus_tag="RBRH_00039"
/codon_start=1
/transl_table=11
/product="transposase / Tylosin transcription regulator
TylR"
/protein_id="YP_004027712.1"
/db_xref="GI:312794790"
/db_xref="GeneID:9985363"
/translation="MIKASLFLPGEVMGWKTPFEEYLGHSSEAVRHSDRRCRLISYCR
GRMLLIQRNDVNPLVSHLEPQRVVVQHKMLHHFVSRLPWSN"
misc_feature complement(<48517..48714)
/locus_tag="RBRH_00039"
/note="DDE superfamily endonuclease; Region: DDE_5;
cl02413"
/db_xref="CDD:213106"
gene 48848..48967
/locus_tag="RBRH_04075"
/db_xref="GeneID:9985362"
CDS 48848..48967
/locus_tag="RBRH_04075"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027713.1"
/db_xref="GI:312794791"
/db_xref="GeneID:9985362"
/translation="MMHAVFPSIFMLAFHTLGLASTRFAKKTTLNLCSILFLY"
gene 49874..50101
/locus_tag="RBRH_00038"
/db_xref="GeneID:9988049"
CDS 49874..50101
/locus_tag="RBRH_00038"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027714.1"
/db_xref="GI:312794792"
/db_xref="GeneID:9988049"
/translation="MEWSVALTLLCARASLALKLVIGVQSFPFYAHAWSEAADVVIGD
SALRRKELSVILEFPHPLLDLSHGSSRHRLS"
misc_feature <49874..50041
/locus_tag="RBRH_00038"
/note="Transglutaminase-like superfamily; Region:
Transglut_core3; pfam13471"
/db_xref="CDD:205649"
gene 50073..51815
/locus_tag="RBRH_00037"
/db_xref="GeneID:9985361"
CDS 50073..51815
/locus_tag="RBRH_00037"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027715.1"
/db_xref="GI:312794793"
/db_xref="GeneID:9985361"
/translation="MALLGIAYPNTQDFLAQNRDWMLVHDQSNRIAGALWHQQDSAGQ
RVIRGQLGTYFYCFYGAAFSKLNHSEIQEDDLKKIAAEGPARLMAHFWGKYLFICFDQ
AARKFICCSDPSSQWTLYWSWSSRHGLLFSDTITCLHQALVENGERPAWNKAFFTTWL
RTGSVQNGELPFDRINEIPVGCAVSYTDGGKPQLLTVWDPLKHAIKGHGETPFDILKN
YLNKFVSLAERPVLELSGGLESSAVLLALRALSSAEQPLFCAHYYHADVASSNELEHA
RAVAQSTRACLHEVDAKILSFAPVQSVPRVAKPHIRYCLLAFNQYFANQLEKRENTQL
ISGHGGDSLFLSPPPFGALADAALAWQWRRLVRVAMDLALIRRASLVEVVTSAARSLF
SADPSENISGTFDLLSTDAQHEPFDRRTPLHPFLQQTKIRLPGKLYQLFLAFLSLDDI
RAPSYPFTSRTHYPFLCQPMVEFALSTPSYDHFEGAHNRIVLRKSVSAATGYPNLWRR
NKGETSGIDLLGIRDHKNHLMALCLEGFLAKEGYLDLKRTRAAIDNSSKGHSNYFMDL
LHLYAVELFIQGWQ"
misc_feature <50337..50642
/locus_tag="RBRH_00037"
/note="Glutamine amidotransferases class-II (GATase). The
glutaminase domain catalyzes an amide nitrogen transfer
from glutamine to the appropriate substrate. In this
process, glutamine is hydrolyzed to glutamic acid and
ammonia. This domain is related to...; Region: Gn_AT_II;
cl00319"
/db_xref="CDD:213093"
misc_feature 50751..51605
/locus_tag="RBRH_00037"
/note="The C-terminal domain of Asparagine Synthase B.
This domain is always found associated n-terminal
amidotransferase domain. Family members that contain this
domain catalyse the conversion of aspartate to asparagine.
Asparagine synthetase B catalyzes the...; Region:
Asn_Synthase_B_C; cd01991"
/db_xref="CDD:30178"
misc_feature order(50769..50777,50850..50858,51039..51041,51078..51086)
/locus_tag="RBRH_00037"
/note="Ligand Binding Site [chemical binding]; other site"
/db_xref="CDD:30178"
misc_feature order(50769..50777,50850..50858,51039..51041,51078..51086)
/locus_tag="RBRH_00037"
/note="Molecular Tunnel; other site"
/db_xref="CDD:30178"
gene 51718..51825
/locus_tag="RBRH_00036"
/db_xref="GeneID:9985360"
CDS 51718..51825
/locus_tag="RBRH_00036"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027716.1"
/db_xref="GI:312794794"
/db_xref="GeneID:9985360"
/translation="MPQLTIAAKAIVIILWTFFIYTPSSFLSKDGNNSG"
gene 51832..52398
/locus_tag="RBRH_04074"
/db_xref="GeneID:9985359"
CDS 51832..52398
/locus_tag="RBRH_04074"
/codon_start=1
/transl_table=11
/product="multidrug resistance ABC transporter ATP-binding
protein/permease"
/protein_id="YP_004027717.1"
/db_xref="GI:312794795"
/db_xref="GeneID:9985359"
/translation="MRHDAFKTILFLLRCLWTPEWHARLQTIAAIVCTGCSIGLTVIA
PMLLKWLIDGFSDASLSAVNVYLLCVAYGGAWFLSQVMRRCEQYLFVLIHERIKRTIT
LNYVSQVLAQPAASLSDHQTGASVSEVSRAQDSVLRALIGIFWSIVPLCVEIVVADII
VFSLFGPIYAAVLPWFFSNLSLFNCVDG"
misc_feature 51859..>52365
/locus_tag="RBRH_04074"
/note="ABC-type multidrug transport system, ATPase and
permease components [Defense mechanisms]; Region: MdlB;
COG1132"
/db_xref="CDD:31327"
misc_feature 51910..>52350
/locus_tag="RBRH_04074"
/note="ABC transporter transmembrane region; Region:
ABC_membrane; cl00549"
/db_xref="CDD:207103"
gene 52586..53593
/locus_tag="RBRH_00035"
/db_xref="GeneID:9988048"
CDS 52586..53593
/locus_tag="RBRH_00035"
/codon_start=1
/transl_table=11
/product="multidrug resistance ABC transporter ATP-binding
protein/permease"
/protein_id="YP_004027718.1"
/db_xref="GI:312794796"
/db_xref="GeneID:9988048"
/translation="MFGALQLLIVGIGLTTLTCLAGSDILAHQLTIGDFVLLNSYLLQ
FTLPLSTFGYAVREAQIGLFNLSELLHALSVRRRFEPITQNLFKGAPSIEFRNASFRH
PSGKHVLHHASFSVPAGAFVALVGSSGAGKSTLIKLLLRLYKLDEGQIFIDGQPIESF
SESQLRQSISYVTQDAHLLDRSIRENICFACPQASDVELEQAIRCSALTPVIAAASHG
LNTPIGERGNKLSGGERQRVALARAFLRNSHLLLLDEPTTALDAHTEADIFKHLYERY
HQTTRLVVAHRLSAIQHADLILVLQEGSIVEAGTHSSLLAQHGVYASLWRKQTSLLAT
E"
misc_feature 52862..53569
/locus_tag="RBRH_00035"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:213113"
misc_feature 52862..53506
/locus_tag="RBRH_00035"
/note="ABC-type antimicrobial peptide transport system,
ATPase component [Defense mechanisms]; Region: SalX;
COG1136"
/db_xref="CDD:31331"
misc_feature 52961..52984
/locus_tag="RBRH_00035"
/note="Walker A/P-loop; other site"
/db_xref="CDD:72971"
misc_feature order(52970..52975,52979..52987,53105..53107,53345..53350,
53441..53443)
/locus_tag="RBRH_00035"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:72971"
misc_feature 53096..53107
/locus_tag="RBRH_00035"
/note="Q-loop/lid; other site"
/db_xref="CDD:72971"
misc_feature 53273..53302
/locus_tag="RBRH_00035"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:72971"
misc_feature 53333..53350
/locus_tag="RBRH_00035"
/note="Walker B; other site"
/db_xref="CDD:72971"
misc_feature 53357..53368
/locus_tag="RBRH_00035"
/note="D-loop; other site"
/db_xref="CDD:72971"
misc_feature 53429..53449
/locus_tag="RBRH_00035"
/note="H-loop/switch region; other site"
/db_xref="CDD:72971"
gene 53797..54225
/locus_tag="RBRH_04073"
/db_xref="GeneID:9985358"
CDS 53797..54225
/locus_tag="RBRH_04073"
/codon_start=1
/transl_table=11
/product="transposase"
/protein_id="YP_004027719.1"
/db_xref="GI:312794797"
/db_xref="GeneID:9985358"
/translation="MGPKTPVPEGDLFRQPLREQINLKHPLVRLADLIDWDRLSTAMS
ASCATRCVGWLVQALRGACCRRTFRHGRRGVSANSTLAVSGLLRSDGSRFAFGAACCV
GPASSAQCGGSERAYVALELREWPTRRLRRRQAQTGKHGA"
misc_feature 54128..54626
/note="potential frameshift: common BLAST hit:
gi|187928556|ref|YP_001899043.1| transposase IS4 family
protein"
gene 54128..54547
/locus_tag="RBRH_00034"
/db_xref="GeneID:9988047"
CDS 54128..54547
/locus_tag="RBRH_00034"
/codon_start=1
/transl_table=11
/product="transposase"
/protein_id="YP_004027720.1"
/db_xref="GI:312794798"
/db_xref="GeneID:9988047"
/translation="MVLNERTLHSSCESGPRAGYDGDKRKRASTVHRAVDTLGHWLAV
HVTPANEQARAQVPVLAQEGQLVSGQSVKLAFADQGYIGEEPAQAAQDEGIEVQVIKL
PEAKKSFIPAAAPMGRRAQFRMAQSLSKARSRRRAFA"
misc_feature <54221..>54415
/locus_tag="RBRH_00034"
/note="DDE superfamily endonuclease; Region: DDE_4;
cl15789"
/db_xref="CDD:211471"
gene 54402..54626
/locus_tag="RBRH_04072"
/db_xref="GeneID:9985357"
CDS 54402..54626
/locus_tag="RBRH_04072"
/codon_start=1
/transl_table=11
/product="transposase"
/protein_id="YP_004027721.1"
/db_xref="GI:312794799"
/db_xref="GeneID:9985357"
/translation="MKASKCRLSNCQRQRRALSLLPRRWVVERSFGWLNRFRRLARDD
ERLPETLVGLHFVVFAMLMLVHAAPILQSA"
misc_feature <54405..54593
/locus_tag="RBRH_04072"
/note="Transposase DDE domain; Region: DDE_Tnp_1_2;
pfam13586"
/db_xref="CDD:205764"
misc_feature <54444..54593
/locus_tag="RBRH_04072"
/note="Transposase DDE domain; Region: DDE_Tnp_1;
pfam01609"
/db_xref="CDD:201886"
gene 54849..56447
/locus_tag="RBRH_00033"
/db_xref="GeneID:9988046"
CDS 54849..56447
/locus_tag="RBRH_00033"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027722.1"
/db_xref="GI:312794800"
/db_xref="GeneID:9988046"
/translation="MYKQKNSKHSSTNSSRPPRSSETQTSVSKDRQSPLKSSKPHFSR
FNIIGDRSAPDIKNNSGTAPTGKPAIKINLNANWANKETRPKCKYAPVNVSGDKNKNF
EYMKEVLEKRIATCKELAYQGDSVGWFSFRKREGTQEHKWQEHDLQSNEVPIIVISGG
SANKIAGDLKSKTGGSLAWHPKYMRDESIYLLVHETEFKCYEAALNEMMEQYKNLHLV
GWYGGSLTGFGAARAAALAFADTLPYRPQQIIMMDQDVALTENTRHTNPGIKTQLNNK
HKNTQKSIIGLGVGYPTREAPPKHFGFEKNEYSPKKPKTANERSVLSPAQQYVSIKSP
FRKKGEDGIYAAYMVAGGEDMLMGIQQGLIQKFKQEGGRNILKNIALMEGKIVKKELK
GQEDELNHYWKKMRPETLKKLFEAEKDTQVEFDGKTMSLNELMEHFKKQGYIEQHPSP
ESHNVAACIIERIILDYHKQKSSDNQSNTIFNTWTKSPLEGATSVKALSAVSTVSDPI
GSPLSALQQSGRLRVSGRSRYYSE"
gene complement(56512..56727)
/locus_tag="RBRH_00032"
/db_xref="GeneID:9985356"
CDS complement(56512..56727)
/locus_tag="RBRH_00032"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027723.1"
/db_xref="GI:312794801"
/db_xref="GeneID:9985356"
/translation="MLKYFVKNKNPDGLRHQFRCAFSRLPTYTRAAPFVYAFYPIINF
MLNMSFCIFLLQSKPFGKFNAVGGILL"
gene complement(56604..56837)
/locus_tag="RBRH_04071"
/db_xref="GeneID:9985355"
CDS complement(56604..56837)
/locus_tag="RBRH_04071"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027724.1"
/db_xref="GI:312794802"
/db_xref="GeneID:9985355"
/translation="MIMCIISMPLRIAKRKMCEFYWHPAALINSRHFCKKYCSNILLK
IKIQMVYGINFDVHSLGCPLTPVRLHLFMHFIL"
gene 56848..56943
/locus_tag="RBRH_00031"
/db_xref="GeneID:9988045"
CDS 56848..56943
/locus_tag="RBRH_00031"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027725.1"
/db_xref="GI:312794803"
/db_xref="GeneID:9988045"
/translation="MEMKLTPTCREINFFQKIFNTNKPFDINHLS"
gene complement(57025..57135)
/locus_tag="RBRH_00030"
/db_xref="GeneID:9985354"
CDS complement(57025..57135)
/locus_tag="RBRH_00030"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027726.1"
/db_xref="GI:312794804"
/db_xref="GeneID:9985354"
/translation="MTKCFKTPTHAFFSLKVHDCKKMIHNIFTANRCNST"
gene 57154..57501
/locus_tag="RBRH_00029"
/db_xref="GeneID:9985353"
CDS 57154..57501
/locus_tag="RBRH_00029"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027727.1"
/db_xref="GI:312794805"
/db_xref="GeneID:9985353"
/translation="MTLDANDEAGIELAWGERLYLRFNAESNKLYIYAPFAPLNDAQD
GQVLADMLRLNCLEVGTRGGVISVSEPMDAFVYHLGLPVETLKPDALEQAIEKFIEER
QRLAQRFRQIRQL"
misc_feature <57226..57468
/locus_tag="RBRH_00029"
/note="Tir chaperone protein (CesT) family; Region: CesT;
cl08444"
/db_xref="CDD:208936"
gene complement(57753..58769)
/locus_tag="RBRH_04070"
/db_xref="GeneID:9985352"
CDS complement(57753..58769)
/locus_tag="RBRH_04070"
/codon_start=1
/transl_table=11
/product="DNA helicase"
/protein_id="YP_004027728.1"
/db_xref="GI:312794806"
/db_xref="GeneID:9985352"
/translation="MCRLDGSPIARSSSRVISALREKGWTVHPQVGVSGYRVDIGVVD
PRAPGRYLLGVECDGAMYHSGATARDRDRLRQHVLEGLGWELYRIWSTDWWLNPQEPI
RKLVARLEELVATVPAEDEPPVELPEEEKYEEAPHALYARAGSVVESIAPATQLPEYE
LTRLDRGNPHLFYESRSMPTLAGQLLKVIETEGPVSQAIVFKRVTWAWGLSRVGSRIE
AHLIAVMPKQVTRTTDKDITFYWPGHANPSTWEGIRVPGGDPETRRSIDEISLEELGN
AAMYILMQQGGTSQEGLVKAVCRLLGVARATAEAGIRISRALTHGRVQATVAMEGGSI
RLRN"
misc_feature complement(58488..58727)
/locus_tag="RBRH_04070"
/note="Superfamily of nucleases including Short Patch
Repair (Vsr) Endonucleases, archaeal Holliday junction
resolvases, MutH methy-directed DNA mismatch-repair
endonucleases, and catalytic domains of many restriction
endonucleases, such as EcoRI, BamHI, and...; Region:
Restriction_endonuclease_like; cl00277"
/db_xref="CDD:212600"
misc_feature complement(order(58596..58598,58602..58604,58653..58655))
/locus_tag="RBRH_04070"
/note="putative active site [active]"
/db_xref="CDD:29959"
misc_feature complement(58110..58265)
/locus_tag="RBRH_04070"
/note="Protein of unknown function (DUF3320); Region:
DUF3320; pfam11784"
/db_xref="CDD:204742"
gene complement(58705..63699)
/locus_tag="RBRH_00028"
/db_xref="GeneID:9988044"
CDS complement(58705..63699)
/locus_tag="RBRH_00028"
/codon_start=1
/transl_table=11
/product="DNA helicase"
/protein_id="YP_004027729.1"
/db_xref="GI:312794807"
/db_xref="GeneID:9988044"
/translation="MGNGVMTQEQADNAKDLTTDTDVKLPDVQVIADLTIGYAAIQNH
VPVIREIRVTNEGETTLSDVELMVKCVPAFAESARFRFEALMPGESRRLAPVDLRPDH
QYFSQLDESERAVITATLHARETALVTATHNIDVLAYDQWAGTRSLPELLAAFCMPNS
RVVDKLLARASGLLRQTSADLTMDGYQSKNREKVWKQVSAIYSTIVAEDIQYSNPPAS
FGNDGQKIRTPERILDGKLATCLDLAMLFASCLEQAGLHPVVLFKEGHAWVGVWLIEI
SFPTALVDDVQTVRKRVKSGEFMVFETTSVAGGHKPSLRWACARGQEHLNDEDEFAYA
VDIRRAREVQLRPLPSRSSQVDASAVPIAKAETPIIEDMPQLPPLDPVVVSLRDNVTF
DTPEGRLAKWKSKLLDLTLRNKLLNFKPTKSTLRVICPNPGALEDRLADGNEFRVRAK
PKMMSGSDGRDADVYTGRNGTAAMDDLATDALDRNEIITDIDEEALESRLLEIFRTAS
TSMEEGGANTLFLAFGMLEWQESQDAESSHLAPIVLIPVTLFRQSVRSGFRLARHDDD
ALVNPTLLQKLQQDFSLRLPSFDVLLTDDRGIDVNRILQIFRLHVGEMKGWEVKEQVH
LGIFSFTKYLMWKDLQDRQKQLQENSVVAHLINNPGKAFADSATGFEPSTLDEKFRPQ
DLFTPLLADSSQLRAVCVAAESKNLVIEGPPGTGKSQTISNLIAHLLATGKTVLFVSE
KMAALEVVHRRLSSLGLGPFCLELHSSKAKKRDVLKQLGVALDAASTRTVKDWERESE
RLLTLRADLNGVARALHHIHPNDLTIYEAIGTSLQYAQWRPGAMPWADADVHDRARLE
ALRESCRQMGALAGQLTGLQNHPLAAVHKTEWMASWQQEFLDAVSAFEAQIKKLDETA
SNLLDQLGLPKIAFSLNGLGQLDVLADVLFAAPTVPIEVARSAHDESTRNRLANLRRH
GLARNQAWEPLSKHYVEDVATLNASELKLQWAAATHTWWPKRLFAQRAVTGRLRLYRQ
DQRRPPGGDVPSIITALTAVNAEDKIIESMSHDASQLLHEAFAASKTDWNAIESAERW
ATSFADAVAAIADNDIELAQTLRAKLQPFVSDNRGMLKAGMPLGSSLLAYRDCYRDVM
TKLRQVIELGHCQANFGLDPAAASVTPRLLNLLQRWQSASRQLQPWCLWRKSRTNAIN
SGLQGIVDALEAGEVPLSAVATFFEYSYQSWWLRKAIDREPVLCNFSSAEHNRKIAEF
NEADERFQKLTQQYIVAKLAGQIPASLEVVPGADAELGKLRRELQKQRKHMPIRQLMQ
NLPSLMTRLKPCLLMSPLSVAQYLDASHAQFDVVIFDEASQIPVWDAVGAIARGKQLV
CVGDPKQLPPTNFFCRSDDSEVGADSDDVQDLESILDECLSIGLPELRLKWHYRSKHE
GLITFSNVTYYNNELITFPSPMTNDQSVRFERVLGVYDRGGSRTNRAEADAIVKAIER
HYLDSAKRHLTLGVVTFNQAQQSLIERMLDERRRASQQLDQAIAQAVQEPLFIKNLEN
VQGDERDIIFFSITYGPNASGKISLNFGPLNLEGGHRRLNVAVSRARVGVVIFSTLLP
EQIDLSRVRAAGVRDLKNYLEFAIRGPRALVEQNVPTGREPDSPFEQQGDFRTS"
misc_feature complement(62881..63111)
/locus_tag="RBRH_00028"
/note="Transglutaminase-like superfamily; Region:
Transglut_core; cl10469"
/db_xref="CDD:209148"
misc_feature complement(61969..62448)
/locus_tag="RBRH_00028"
/note="Protein of unknown function (DUF4011); Region:
DUF4011; pfam13195"
/db_xref="CDD:205376"
misc_feature complement(61423..61614)
/locus_tag="RBRH_00028"
/note="Part of AAA domain; Region: AAA_19; pfam13245"
/db_xref="CDD:205425"
misc_feature complement(59533..>59922)
/locus_tag="RBRH_00028"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:213113"
misc_feature complement(58807..>59850)
/locus_tag="RBRH_00028"
/note="Superfamily I DNA and RNA helicases and helicase
subunits [DNA replication, recombination, and repair];
Region: COG1112"
/db_xref="CDD:31309"
misc_feature complement(58885..59409)
/locus_tag="RBRH_00028"
/note="Family description; Region: UvrD_C_2; cl15862"
/db_xref="CDD:210262"
gene complement(63894..64334)
/locus_tag="RBRH_00027"
/db_xref="GeneID:9985351"
CDS complement(63894..64334)
/locus_tag="RBRH_00027"
/codon_start=1
/transl_table=11
/product="HipA protein"
/protein_id="YP_004027730.1"
/db_xref="GI:312794808"
/db_xref="GeneID:9985351"
/translation="MTRWWVQWAAGVDRIDGVVVDDEAIERHLLEVVTSDRFAGARDP
DDDFRISLAGAQEKDAHHAHLQAAPWPGRWSAGRLQHLRGQRVAVPSLVQGVWLIHGK
SSHLSRLRNWRMGGRRHADRKTRQRRHAGLRGSTCKPAGTMMRN"
gene complement(64444..64683)
/locus_tag="RBRH_00026"
/db_xref="GeneID:9985350"
CDS complement(64444..64683)
/locus_tag="RBRH_00026"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027731.1"
/db_xref="GI:312794809"
/db_xref="GeneID:9985350"
/translation="MQAVAQMIKRTRGQPTALTAVHIGYRQWVCLLVVAGSTQLFEKS
AYPSKPAGAPHTLQLQTATSLSLSDKRILDAAIHK"
gene 64788..65288
/locus_tag="RBRH_00025"
/db_xref="GeneID:9985349"
CDS 64788..65288
/locus_tag="RBRH_00025"
/codon_start=1
/transl_table=11
/product="sulfite dehydrogenase"
/protein_id="YP_004027732.1"
/db_xref="GI:312794810"
/db_xref="GeneID:9985349"
/translation="MNKFATLARGLALVLFVFGGLAQATPMQLDVTGNIQRTNVPGTH
MYRFTEQEWRSMPRAQFTTATNWTPSSQFSGVLLSDVLSKVGAKGTTLRVTAHDGYVS
YAVPISDAHRYGVILADQINGKQLTLRDFGPLFLVYPRDQFPKELNRSEVAGRFVWQV
KSIEVR"
misc_feature <64929..65282
/locus_tag="RBRH_00025"
/note="Sulfite oxidase (SO) family, molybdopterin binding
domain. This molybdopterin cofactor (Moco) binding domain
is found in a variety of oxidoreductases, main members of
this family are nitrate reductase (NR) and sulfite oxidase
(SO). SO catalyzes the...; Region: SO_family_Moco;
cl00199"
/db_xref="CDD:206895"
gene 65275..67113
/locus_tag="RBRH_00024"
/db_xref="GeneID:9985348"
CDS 65275..67113
/locus_tag="RBRH_00024"
/EC_number="2.7.3.-"
/codon_start=1
/transl_table=11
/product="sensor protein luxQ"
/protein_id="YP_004027733.1"
/db_xref="GI:312794811"
/db_xref="GeneID:9985348"
/translation="MRSDDTCQWPRWSRAGTLLGAALALVIAAWGYTALQWTSTEPMS
VYKLAGPQENYYWAPAQFKFNADRLENLLLRYASGDSQDLDEIQRSYEILVSKFSLIS
KPSDTTQVQLSVPDYVQAIAAIRHCLQTIDPLIVDLQPGDRSTARVIAGHLHALDEST
LRLAQGIGEAENKRRDIALEDFRHKRRVLWGSCIIAASLTSTLLITLTIATYRGMRAA
WRERTWRIAEQSATAAANASLKAKSAFLGAIGHEIRTPLQTISAGLSSLADAELSTRS
MRAVLRMEQAAEQIDAQLRDLADYARLDAGKLKLRIAPVDLIDIVQQVATQMRPMAAL
KRLSVRTDTSGIVWLIHSDQQRIRQILLNLVDNAIKYSTQGDVLIRATQHIAASECVT
RIAVTDHGIGIPEQAKEKLFEPFVQLDDGNTRSHTGIGMGLAIVDGLVRLLGGHITVT
STLGVGSTFEVTFREPTDSLIRRGQPSDDRQSALPNTPLSGKQALVVDDQPQMRDALV
ALMRSLGLAVTAVDSAWEARVMLSQREVDVALIDLQMPGEGGASLARWIRKTGAPHSK
LIGMSASAPELLSETQLAMFDDLLMKPIRIDALRTAFGNLLDGESS"
misc_feature <66007..66663
/locus_tag="RBRH_00024"
/note="Signal transduction histidine kinase [Signal
transduction mechanisms]; Region: BaeS; COG0642"
/db_xref="CDD:30987"
misc_feature 66007..66180
/locus_tag="RBRH_00024"
/note="Histidine Kinase A (dimerization/phosphoacceptor)
domain; Histidine Kinase A dimers are formed through
parallel association of 2 domains creating 4-helix
bundles; usually these domains contain a conserved His
residue and are activated via...; Region: HisKA; cd00082"
/db_xref="CDD:119399"
misc_feature order(66007..66009,66019..66021,66031..66033,66040..66042,
66052..66054,66061..66063,66112..66114,66121..66123,
66130..66132,66142..66144,66151..66153,66163..66165)
/locus_tag="RBRH_00024"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119399"
misc_feature 66025..66027
/locus_tag="RBRH_00024"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:119399"
misc_feature 66343..66663
/locus_tag="RBRH_00024"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:28956"
misc_feature order(66361..66363,66373..66375,66382..66384,66460..66462,
66466..66468,66472..66474,66478..66483,66562..66573,
66619..66621,66625..66627,66640..66645,66649..66651)
/locus_tag="RBRH_00024"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28956"
misc_feature 66373..66375
/locus_tag="RBRH_00024"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:28956"
misc_feature order(66472..66474,66478..66480,66562..66564,66568..66570)
/locus_tag="RBRH_00024"
/note="G-X-G motif; other site"
/db_xref="CDD:28956"
misc_feature 66757..67095
/locus_tag="RBRH_00024"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature 66757..67080
/locus_tag="RBRH_00024"
/note="Response regulator receiver domain; Region:
Response_reg; pfam00072"
/db_xref="CDD:200976"
misc_feature order(66766..66771,66898..66900,66922..66924,66985..66987,
67039..67041,67048..67053)
/locus_tag="RBRH_00024"
/note="active site"
/db_xref="CDD:29071"
misc_feature 66898..66900
/locus_tag="RBRH_00024"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature order(66907..66912,66916..66924)
/locus_tag="RBRH_00024"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature 67048..67056
/locus_tag="RBRH_00024"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
gene 67110..67889
/locus_tag="RBRH_00023"
/db_xref="GeneID:9985347"
CDS 67110..67889
/locus_tag="RBRH_00023"
/EC_number="1.1.1.100"
/codon_start=1
/transl_table=11
/product="3-oxoacyl-ACP reductase"
/protein_id="YP_004027734.1"
/db_xref="GI:312794812"
/db_xref="GeneID:9985347"
/translation="MSVGKVALVTGSAKRAGREILEHLAKNGYRVAVHAHTARDEAET
AALALQHAGYDALAFNGDLQDAAQIDQLIQDVFAHFGRLDLLVNNAAVFWQDDFVDFS
VQALDQAWAVNCRAPILLTRAFHDCAKAAGAIGAVVNVVDQKVKGNFHRDHFTYTVGK
TALGNLTQMLAISAAPVLRINAVFPGLMLPSDSQTDADFKYAAHQSNLLGRVAGPADV
AAAVLLLASPAYNGTDFVVDSGQNLIPVQQDVIYLHRAPRS"
misc_feature 67110..67868
/locus_tag="RBRH_00023"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:213117"
misc_feature 67119..67829
/locus_tag="RBRH_00023"
/note="oxidoreductase; Validated; Region: PRK05717"
/db_xref="CDD:168204"
misc_feature order(67140..67142,67146..67151,67155..67157,67212..67220,
67374..67382,67527..67535,67575..67577,67587..67589,
67662..67673)
/locus_tag="RBRH_00023"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:187535"
misc_feature order(67446..67448,67533..67535,67575..67577,67587..67589)
/locus_tag="RBRH_00023"
/note="active site"
/db_xref="CDD:187535"
gene complement(67909..68814)
/locus_tag="RBRH_00022"
/db_xref="GeneID:9985346"
CDS complement(67909..68814)
/locus_tag="RBRH_00022"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027735.1"
/db_xref="GI:312794813"
/db_xref="GeneID:9985346"
/translation="MGRSRRPGHYMFSSEDKVSEESLAIAMRIHDLLNRHGVGKRQHA
AEIQRILGLSYSQAHRKMKGANPWTIAQVKAVAQAYGESAAMLLDGLDSSEPVSAIAA
KMQEAVFYIGDATYRCLADIGERAHDVSGLEFVALKDGNRWKVFPVEAAPGGDYFVVE
QILIRARSAPEVSPVIAILDDDPLLTAEMCSYFHSHGYVAQPYNTEATFRAALRENVF
DGFIVDWLLESGTAEQTIQSIRQSRYGDAPILLLTGKLVTGEANEDDVARVIQQYDVK
PFEKPARLNWVAVELARRLKAGAPG"
misc_feature complement(68320..68751)
/locus_tag="RBRH_00022"
/note="BetR domain; Region: BetR; pfam08667"
/db_xref="CDD:117240"
misc_feature complement(67963..68289)
/locus_tag="RBRH_00022"
/note="Response regulator receiver domain; Region:
Response_reg; pfam00072"
/db_xref="CDD:200976"
misc_feature complement(67978..68283)
/locus_tag="RBRH_00022"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature complement(order(67984..67989,67996..67998,68056..68058,
68119..68121,68143..68145,68272..68277))
/locus_tag="RBRH_00022"
/note="active site"
/db_xref="CDD:29071"
misc_feature complement(68143..68145)
/locus_tag="RBRH_00022"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature complement(order(68119..68127,68131..68136))
/locus_tag="RBRH_00022"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature complement(67981..67989)
/locus_tag="RBRH_00022"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
gene 68903..69013
/locus_tag="RBRH_04069"
/db_xref="GeneID:9985345"
CDS 68903..69013
/locus_tag="RBRH_04069"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027736.1"
/db_xref="GI:312794814"
/db_xref="GeneID:9985345"
/translation="MHLVQRLGLLLLDAHGTRHECNQSDMAAWGQSNAMD"
gene complement(69035..69187)
/locus_tag="RBRH_00021"
/db_xref="GeneID:9988043"
CDS complement(69035..69187)
/locus_tag="RBRH_00021"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027737.1"
/db_xref="GI:312794815"
/db_xref="GeneID:9988043"
/translation="MLCNKLHGLLRDQLFDCMGFRQLRATGCAIHLGVRLTVALSAYR
IRGEPR"
gene 69443..69943
/locus_tag="RBRH_00020"
/db_xref="GeneID:9985344"
CDS 69443..69943
/locus_tag="RBRH_00020"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027738.1"
/db_xref="GI:312794816"
/db_xref="GeneID:9985344"
/translation="MPWMPKTGHSGIGGGGMSFESGTRASAALERPLTREELNRRAVA
FEVTKWLQIGAAAVTVLLCMMIIYRALQDIDAGRGGHWKIAAALLTGHLAVLWAILRA
MRSNRYQPLGEDDEPAATLLLEGMRHDAQVMAYCQAIQDEPRALTGHDIDVLRHYRQS
MGAGPG"
gene 70027..70125
/locus_tag="RBRH_00019"
/db_xref="GeneID:9985343"
CDS 70027..70125
/locus_tag="RBRH_00019"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027739.1"
/db_xref="GI:312794817"
/db_xref="GeneID:9985343"
/translation="MRASIALSVQASYRIMRMEAGSASHRDQDSWH"
gene 70091..71554
/locus_tag="RBRH_00018"
/db_xref="GeneID:9985342"
CDS 70091..71554
/locus_tag="RBRH_00018"
/codon_start=1
/transl_table=11
/product="transporter"
/protein_id="YP_004027740.1"
/db_xref="GI:312794818"
/db_xref="GeneID:9985342"
/translation="MQAIAIKIRGIEDIISFLDSRPGIAGRAGLIWWLSLGGLFLDAF
TNSALSAGLGPMTRDLHLTAAQVALLTSFASWVAIAFNPIGGWMADRWGRIRPLIIAK
LLSVLGAVLVVLAPNFEVILLGRFFVGMAYGIDFAIAMAMLAEFTPARLKSRLNAWQG
MWYVAVCTNLLLALLFHSWNVGDAIWRYSVAATVVFGVAIVLMQFAFLVESPIWLARR
NRLDDAVRAMTQIYGRPFVAAPLHERVPLINPATRGLANVLLIFRGVYLPRTILAATV
QIGQSIEYFAIGWYLPLISAALFGKDFVYATLGALVFNVFGIAGGFASPLIARRLGLR
HASAIGFAAVFAMLLILGLFHARMPLWACVVIPSLFILFHSGGPGANGKTLSSLSFRG
ELRASANGIVGALGSIGAALGLLVFPLFLERYGLEQTFLILAVVPLTASAICFAIRWD
PTRTVITPDNEPDAPHFKDIPPSKPALTNPVIEKTPL"
misc_feature 70184..>70714
/locus_tag="RBRH_00018"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature 70190..71287
/locus_tag="RBRH_00018"
/note="Major Facilitator Superfamily; Region: MFS_1;
pfam07690"
/db_xref="CDD:191813"
misc_feature order(70226..70228,70235..70243,70247..70252,70301..70303,
70310..70315,70322..70324,70334..70339,70343..70348,
70484..70489,70496..70501,70508..70513,70520..70522,
70556..70561,70565..70570,70586..70588)
/locus_tag="RBRH_00018"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
gene 71551..73098
/locus_tag="RBRH_00017"
/db_xref="GeneID:9985341"
CDS 71551..73098
/locus_tag="RBRH_00017"
/EC_number="2.7.1.30"
/codon_start=1
/transl_table=11
/product="glycerol kinase"
/protein_id="YP_004027741.1"
/db_xref="GI:312794819"
/db_xref="GeneID:9985341"
/translation="MTAHRNAILAIDEGTSGTRAALVDASGHVFCLEYLPLRVDSPQP
GVVEQDANAILDKTIAVCRATLAQAAQQGVRVVAAAISTQRATAVLWDTHTGRALVPA
MVWQDTRHAAELDRLAATWDRRLRASVGRPAGVRSPYLWAAHQLRTVPAVADAFHARR
LAFGTIDTWLLWHLSTERACVTTPTNATSASAYLLGEHRYFDAWVDALGFPRELLPAL
REDADTFGRTRSDLLGLDVPILACAGDQFAGAVGLGCLDRGQSMCVHGTGSFVDLLTG
PALPYTTLMDGHGQQPSYDATLAMTARRHGGVSHYSLENFVATTGSALNWVCDTLRWF
DHPEQISALARPVSSAHGVLFVPALTGLRVPQMEPSARASLSGISIATTREEIAFALL
EGIGHSVASCMEANQAVARIDVHELVVGGGLSGSDVLLQIQADLSGLPVQRIRESDRA
SLRGAAFLAGASGLLWDSLDAARATLVTDAVFEPSPDTGLRQQRRAKWHARIQSELAH
AADFDHG"
misc_feature 71572..73047
/locus_tag="RBRH_00017"
/note="Glycerol kinase [Energy production and conversion];
Region: GlpK; COG0554"
/db_xref="CDD:30900"
misc_feature 71572..73044
/locus_tag="RBRH_00017"
/note="Nucleotide-Binding Domain of the sugar
kinase/HSP70/actin superfamily; Region:
NBD_sugar-kinase_HSP70_actin; cl17037"
/db_xref="CDD:213144"
misc_feature order(71584..71595,71599..71601,71605..71607,72283..72285,
72340..72351,72811..72813)
/locus_tag="RBRH_00017"
/note="nucleotide binding site [chemical binding]; other
site"
/db_xref="CDD:212657"
gene 73117..74796
/locus_tag="RBRH_00016"
/db_xref="GeneID:9985340"
CDS 73117..74796
/locus_tag="RBRH_00016"
/EC_number="1.1.5.3"
/codon_start=1
/transl_table=11
/product="glycerol-3-phosphate dehydrogenase"
/protein_id="YP_004027742.1"
/db_xref="GI:312794820"
/db_xref="GeneID:9985340"
/translation="MIFLPSRRPRQDRAAMTTTSPLRVVREEQLARLSDDTFDMLIVG
GGVTGAYAALDASLRGYRVALIEKSDFASGTSSKSSKMVHGGLRYIEQGNLSLVRHSL
LERQRLRRNARHLVQRLPFLFPVMERDGVFDQRLAKAFEGLLWTYDLAGGWREGILHQ
KLTKAEVLSHCPTFNEAYLSGGFLYFDARVDDARLTLTLARTAAFHGAAVVNHAHVAE
VTRNEQGHVDGAIVHADGCEIRVRAGVVIMATGVWLRDWDGRRKGDTPALQVRPAKGV
HVAIPWLKIRNDCTVTIPVPGRNRRATITRWGNVSYLGTTDEDYDGDLDNVYCTRQEL
DFLLEGARSALKTDLQPHDVVGSIAGCRPLVGPPGGKTIEMRRNHEIRVAPDGLVTIV
GGKLTTSRHMAEQTIDAAQKVIGKRAPCRTKSAYLLGAAGYDPQAIVASGGLAAHLGE
RYGTEARFVSDLIDAHPSLLAPIVEGLPYSEAEVVYAARHELARSVDDVLSRRTRARL
MARDASARAAPRVGQILKAELGLSDALVASQVRDYVAAVQYEKSVLIGDNG"
misc_feature 73192..74757
/locus_tag="RBRH_00016"
/note="Glycerol-3-phosphate dehydrogenase [Energy
production and conversion]; Region: GlpA; COG0578"
/db_xref="CDD:30923"
misc_feature 73240..>73338
/locus_tag="RBRH_00016"
/note="NAD(P)-binding Rossmann-like domain; Region:
NAD_binding_8; pfam13450"
/db_xref="CDD:205628"
gene 74793..76352
/locus_tag="RBRH_00015"
/db_xref="GeneID:9985339"
CDS 74793..76352
/locus_tag="RBRH_00015"
/EC_number="2.5.1.26"
/codon_start=1
/transl_table=11
/product="Alkyldihydroxyacetonephosphate synthase"
/protein_id="YP_004027743.1"
/db_xref="GI:312794821"
/db_xref="GeneID:9985339"
/translation="MISKEAIQRGYNRGNYVVGAHTPPPYSLNLSSVPDNAPAGGMQR
APVQVSEQQCDALREIADEVITQPAQVVAWTRDWWAASMVTETAGQPATPHAVVVRVS
SVAQIQAVMRIAHAASIPVTASAGRSNVTGAALPVRGGIVLDLCGLNRLLGVDHESQL
VEVEAGMFGDVFEASLQREHKLTMGHWPSSFGISTIGGWIACRGAGQLSTRYGKIEDM
VYGMDVVLADGSLISVGGYPRAAVGPDLQQLFIGSEGTLGIIVRARLKLHRLPDYGRA
IAYGFDSFAAGLHACREIMQRGAHPAALRLYDALESGVQFGLPDTNVLLIADEGTREL
VDAGMRVCEQVCEPQGQQLDGDAIFEKWLNTRYLTGKSAEGFKRSPGFVADTLEMAGR
WRDLAAIYRDVVDALQSVPGTLAGSAHQSHAYVDGACLYFSLRGEVAIEQRAAWYRRA
WDAANAVLLQYNATLSHHHGVGLLRAPYMHDSLGSAFSVLQALKGTLDPKNILNPGKL
GLDDDIVSPAS"
misc_feature 75078..76316
/locus_tag="RBRH_00015"
/note="FAD/FMN-containing dehydrogenases [Energy
production and conversion]; Region: GlcD; COG0277"
/db_xref="CDD:30625"
misc_feature 75078..75497
/locus_tag="RBRH_00015"
/note="FAD binding domain; Region: FAD_binding_4;
pfam01565"
/db_xref="CDD:201863"
gene 76362..76937
/locus_tag="RBRH_00014"
/db_xref="GeneID:9985338"
CDS 76362..76937
/locus_tag="RBRH_00014"
/codon_start=1
/transl_table=11
/product="glycerol uptake operon antiterminator regulatory
protein"
/protein_id="YP_004027744.1"
/db_xref="GI:312794822"
/db_xref="GeneID:9985338"
/translation="MDKSLGARLARHPVIATLYGAEQLDSFISSAAEVGIVANVELRK
LQAVVAALTRAGKCVIVNIDSCDGLSQDKGGVDYLVDIGVTSLVSTRVATVQRANRAG
LMTMQKVFVTDRSTWPRSVKAIEQSDPNLVQLMPAPMLPHLREQDRAALPPIVASGFI
CNEHDVRQAQTHGAVAVSTSDSQLWNLTTPR"
misc_feature 76386..76922
/locus_tag="RBRH_00014"
/note="Glycerol-3-phosphate responsive antiterminator;
Region: G3P_antiterm; cl00852"
/db_xref="CDD:120175"
gene 76971..77279
/locus_tag="RBRH_00013"
/db_xref="GeneID:9985337"
CDS 76971..77279
/locus_tag="RBRH_00013"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027745.1"
/db_xref="GI:312794823"
/db_xref="GeneID:9985337"
/translation="MTPPYLQVIAHYFAKPGQSERVLALLDALARATRDEPKNLDYQF
FRSPHDPDHFVILEQYTDATGLDEHRQTPHFQQIGYKQIIPMLERREVSSHMVHGASQ
"
misc_feature 76992..77252
/locus_tag="RBRH_00013"
/note="Uncharacterized conserved protein [Function
unknown]; Region: COG1359"
/db_xref="CDD:31550"
gene 77276..78433
/locus_tag="RBRH_00012"
/db_xref="GeneID:9985336"
CDS 77276..78433
/locus_tag="RBRH_00012"
/EC_number="1.1.1.61"
/codon_start=1
/transl_table=11
/product="NAD-dependent 4-hydroxybutyrate dehydrogenase"
/protein_id="YP_004027746.1"
/db_xref="GI:312794824"
/db_xref="GeneID:9985336"
/translation="MIPFRFQTVPTVIVEFGAARRLGTLLREHFGTLSRLCVVTDTLL
HRSGLLGPALADLTAQGWHVTVIDDVVADPPEQVVLDAAARASAVGAEIVLGLGGGSS
MDVAKLIAVLVAGQQPLAEMYGVGNVRGTRVPLVQMPTTAGTGSEVTAVSIVTLGEAR
KMGVVAPQLFADVAILDAELTLGLPRATTAATGIDAMVHAIEAYTSARLKNPLSDRLA
LQALELLSRHLLPACDNGQDRAAREAMLLGAMLAGQAFANAPVAAVHALAYPIGGLFH
VPHGLSNALVLPHVLRFNANAAAQQYAQLAEIIAPDARGSDEARTAAWIARIDALIAA
TGIPRTLREVGVGRHELPRMAADAMLQTRLLVNNPREVGEADALAIYEQAW"
misc_feature 77285..78430
/locus_tag="RBRH_00012"
/note="Alcohol dehydrogenase, class IV [Energy production
and conversion]; Region: EutG; COG1454"
/db_xref="CDD:31643"
misc_feature 77291..78421
/locus_tag="RBRH_00012"
/note="5-hydroxyvalerate dehydrogenase (HVD) catalyzes the
oxidation of 5-hydroxyvalerate to 5-oxovalerate with NAD+
as cofactor; Region: HVD; cd08193"
/db_xref="CDD:173952"
misc_feature order(77396..77398,77570..77578,77585..77587,77594..77596,
77693..77698,77702..77704,77756..77761,77813..77815,
77837..77839,77858..77860,77870..77872,78068..78070,
78080..78082,78110..78112)
/locus_tag="RBRH_00012"
/note="putative active site [active]"
/db_xref="CDD:173952"
misc_feature order(77858..77860,77870..77872,78068..78070,78110..78112)
/locus_tag="RBRH_00012"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:173952"
gene complement(78546..79445)
/locus_tag="RBRH_00011"
/db_xref="GeneID:9985335"
CDS complement(78546..79445)
/locus_tag="RBRH_00011"
/codon_start=1
/transl_table=11
/product="transcriptional activator protein metR"
/protein_id="YP_004027747.1"
/db_xref="GI:312794825"
/db_xref="GeneID:9985335"
/translation="MLERIHLAIVREVDRRGSLTAAAEVLCLTQSALSHTVKKMEQML
GTAVWRREGRNLRLTQAGEYLLSVANRVLPQLEHAQARLAQYAQGERGTLRIGMECHP
CYQWLLKVVSPYLAQWPDVDVDVKQKFQFGGIGALFVYDIDILVTPDPLHRAGLRFEP
VFDYEQVLVVQRGHALTRGTHVEPAQLTGEVLITYPVDIDRLDIYAQFLVPAGVRPKR
HKTIETTDIMVQMVASGRGVAALPRWLVQEYANKMPIEPVRLGRNGIAKQIFVGMREA
DADTDYLAAFVALARHSAHYAAA"
misc_feature complement(78585..79430)
/locus_tag="RBRH_00011"
/note="Transcriptional regulator [Transcription]; Region:
LysR; COG0583"
/db_xref="CDD:30928"
misc_feature complement(79257..79430)
/locus_tag="RBRH_00011"
/note="Bacterial regulatory helix-turn-helix protein, lysR
family; Region: HTH_1; pfam00126"
/db_xref="CDD:201021"
misc_feature complement(78585..79169)
/locus_tag="RBRH_00011"
/note="The C-terminal substrate binding domain of
LysR-type transcriptional regulator metR, which regulates
the expression of methionine biosynthetic genes, contains
type 2 periplasmic binding fold; Region: PBP2_MetR;
cd08441"
/db_xref="CDD:176132"
misc_feature complement(order(78744..78749,78753..78758,78774..78791,
79065..79085,79089..79091,79101..79103,79110..79115,
79119..79124))
/locus_tag="RBRH_00011"
/note="putative dimerization interface [polypeptide
binding]; other site"
/db_xref="CDD:176132"
gene 79551..81830
/locus_tag="RBRH_00010"
/db_xref="GeneID:9985334"
CDS 79551..81830
/locus_tag="RBRH_00010"
/EC_number="2.1.1.14"
/codon_start=1
/transl_table=11
/product="5-
methyltetrahydropteroyltriglutamate/homocysteine
S-methyltransferase"
/protein_id="YP_004027748.1"
/db_xref="GI:312794826"
/db_xref="GeneID:9985334"
/translation="MAITHNLGFPRIGAKRELKFALESYWKGQSSLDELKAAGAQLRQ
QHWANQAKLDWSPVGDFAFYDQVLDMSFTLGNLPERVRNLDGDSLDNYFRIARGRSAT
DGACSCGVQAGEMTKWFDTNYHYIVPELSASTTFSLDASRLLGEFEQARRLGVKAKPV
IIGPLTYLWLGKAKDDSDKLALLPRLLPVYAQLLAELAACGAEWVQIDEPILVTELDP
QWQQAFVHAYDTLRTDRVKLLLATYFGQLQENLPLACALPVQGLHVDTLNARDEVCDV
IASLPAERVLSLGVVNGRNIWKTDLVATLDWLEPIHRQLGQRLWLAPSCSLLHVPVDL
ASERGLDAELRSWLAFALQKLDELNVLATALNNGRQAVEAELRDNQAAIAARKVSARV
HNPAVKAALARIDADMERRTNPYPERARKQHEQLQLPPYPTTTIGSFPQTEEIRQARS
RFRRGELDEASYHATMREQIARSVREQEALGLDVLVHGEAERNDMVEYFGEQLEGYAF
SQFGWVQSYGSRCVKPPIMFGDIRRPKPMTLEWIQYAQSLTHKPMKGMLTGPVTILNW
SFVRDDQPRAVSCQQLALAIREEVLDLERAGVRVIQIDEAALREGLPLRKSQWHEYLQ
WAVGAFRIAANGVRDDTQIHTHMCYSEFNDIIASIAEMDADVITIETSRSDMELLDAF
DHFNYPNEIGPGVYDIHSPNIPTQEHIVQLMRKAAERIPAERLWVNPDCGLKTRAWAE
VIPALRNMVAAAHTLRGTA"
misc_feature 79551..81818
/locus_tag="RBRH_00010"
/note="5-methyltetrahydropteroyltriglutamate--homocysteine
S-methyltransferase; Provisional; Region: PRK05222"
/db_xref="CDD:179966"
misc_feature 79557..80642
/locus_tag="RBRH_00010"
/note="CIMS - Cobalamine-independent methonine synthase,
or MetE, N-terminal domain_like. Many members have been
characterized as
5-methyltetrahydropteroyltriglutamate-homocysteine
methyltransferases, EC:2.1.1.14, mostly from bacteria and
plants. This enzyme...; Region: CIMS_N_terminal_like;
cd03312"
/db_xref="CDD:48147"
misc_feature order(79596..79598,79605..79607,79899..79901,79914..79916,
79920..79922)
/locus_tag="RBRH_00010"
/note="THF binding site; other site"
/db_xref="CDD:48147"
misc_feature 80844..81809
/locus_tag="RBRH_00010"
/note="CIMS - Cobalamine-independent methonine synthase,
or MetE, C-terminal domain_like. Many members have been
characterized as
5-methyltetrahydropteroyltriglutamate-homocysteine
methyltransferases, EC:2.1.1.14, mostly from bacteria and
plants. This enzyme...; Region: CIMS_C_terminal_like;
cd03311"
/db_xref="CDD:48146"
misc_feature order(80856..80864,81015..81017,81033..81035,81354..81356,
81360..81362,81486..81488,81492..81494,81741..81746)
/locus_tag="RBRH_00010"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:48146"
misc_feature order(81108..81116,81246..81248,81366..81368)
/locus_tag="RBRH_00010"
/note="THF binding site; other site"
/db_xref="CDD:48146"
misc_feature order(81486..81488,81492..81494,81558..81560,81741..81743)
/locus_tag="RBRH_00010"
/note="zinc-binding site [ion binding]; other site"
/db_xref="CDD:48146"
gene complement(81841..82992)
/locus_tag="RBRH_00009"
/db_xref="GeneID:9985333"
CDS complement(81841..82992)
/locus_tag="RBRH_00009"
/EC_number="2.1.1.-"
/codon_start=1
/transl_table=11
/product="methyltransferase"
/protein_id="YP_004027749.1"
/db_xref="GI:312794827"
/db_xref="GeneID:9985333"
/translation="MNGLECSMLNWTQGGQTHHARWRSHAGLPPPRRVVPADDTLGAD
HAYRLACEGTAILWQGDFNNARQLLQAIARRIERRRPKRGATPQETFNLHRLAQAQRA
RTLAMLLVPLDAHYRIPLRRAPDLSGACAHAYGPPPGGDAVSVVSLRELLGMVGAFEW
HRKGVVIDALGGARIHPHYGVFSPVRGEYLDLIAQAPLPAGADALAFDIGTGTGVIAA
LLARRGVRRVIATDVDSRALDCARENVARLGLSAQVEVVRADLFPLSRRAPLVVCNPP
WVPARPSASIEHAVFDPDSRMLRGFLAGLPAHLAPGGEGWLIMSDLAEHLGLRPREAF
LAMIDAAGLQVLNRVDIRPRHPKASDAADPLHAARAREVTSLWRLAGRG"
misc_feature complement(81967..>82485)
/locus_tag="RBRH_00009"
/note="Methylase of polypeptide chain release factors
[Translation, ribosomal structure and biogenesis]; Region:
HemK; COG2890"
/db_xref="CDD:32715"
misc_feature complement(82000..82473)
/locus_tag="RBRH_00009"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cl16911"
/db_xref="CDD:213141"
gene complement(83109..83609)
/locus_tag="RBRH_00007"
/db_xref="GeneID:9985332"
CDS complement(83109..83609)
/locus_tag="RBRH_00007"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027750.1"
/db_xref="GI:312794828"
/db_xref="GeneID:9985332"
/translation="MLRCCSIFRRSIPEVGMQVKSLIGATAALFTMLSAAAQAAGPVG
VQVSGCWVRTMPATLPSSAYFTIKNDADTPVSLKDVDAPAFGMVMMHQTRSNGSTSRM
VHVDAVGVPAHGTLKFAPGGYHVMLEQPKSALKVGTTIPLTLDFGADGKLDVQCELRP
ASASAH"
misc_feature complement(83145..83459)
/locus_tag="RBRH_00007"
/note="Protein of unknown function (DUF461); Region:
DUF461; pfam04314"
/db_xref="CDD:190941"
gene complement(83611..84006)
/locus_tag="RBRH_00006"
/db_xref="GeneID:9985331"
CDS complement(83611..84006)
/locus_tag="RBRH_00006"
/codon_start=1
/transl_table=11
/product="Sodium/calcium antiporter"
/protein_id="YP_004027751.1"
/db_xref="GI:312794829"
/db_xref="GeneID:9985331"
/translation="MLIGGAKGFIDGVDGVSQLLGVSPLLLSLLIIPIATELPEKINS
ILWVRRGKDTLAFGNLTGAMVFQGTLLPALGIMLTPWEPRIEVLTGIAITLVAAAWCR
ALSRGRGLPVWALLFNGVLYAVYLAVTLA"
misc_feature complement(83617..>84006)
/locus_tag="RBRH_00006"
/note="Ca2+/Na+ antiporter [Inorganic ion transport and
metabolism]; Region: ECM27; COG0530"
/db_xref="CDD:30876"
gene complement(83975..84961)
/locus_tag="RBRH_00005"
/db_xref="GeneID:9985330"
CDS complement(83975..84961)
/locus_tag="RBRH_00005"
/codon_start=1
/transl_table=11
/product="Sodium/calcium antiporter"
/protein_id="YP_004027752.1"
/db_xref="GI:312794830"
/db_xref="GeneID:9985330"
/translation="MRAAACRLECAGLWGVAFPALPGRGCDAAAGLSGRAASVRRQHA
RKIAPTVSGSCRGALGPRGFGQTIDAAPRPGRTVAPRHGSCVRPWRYRAPSPFPLPAC
PFGHAARCDGSVRMTWLVLELMLMLAVILVAAELFTNALEHLGERMKLSEGVTGSLFA
AVGTALPETLIPLIAIVSGRGERLNEEIGVGAILGAPLMLATLSTCLMTVAVLRQRGL
CGRIRPEVGGINRDLNYFLFAFALSAAAMYVPHTSVLVRAGLSAALVCVYLCYVYATL
RASQALVAGGHGTEAPHVMYLSRFGIPTRLRDDRAAAGHRAGLVNRRCEGIH"
misc_feature complement(<84092..84553)
/locus_tag="RBRH_00005"
/note="Ca2+/Na+ antiporter [Inorganic ion transport and
metabolism]; Region: ECM27; COG0530"
/db_xref="CDD:30876"
misc_feature complement(84143..84553)
/locus_tag="RBRH_00005"
/note="Sodium/calcium exchanger protein; Region: Na_Ca_ex;
pfam01699"
/db_xref="CDD:190072"
gene 85017..86645
/locus_tag="RBRH_00004"
/db_xref="GeneID:9985329"
CDS 85017..86645
/locus_tag="RBRH_00004"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027753.1"
/db_xref="GI:312794831"
/db_xref="GeneID:9985329"
/translation="MARIIPDDWKHLDAAGAAARERETLTTLAKQLPDGYTVYHGVHW
TRVNQGFSVFGEADFVVVGPSGRLMVIEQKSGFLRETSTGLVKVYLQKERNVAVQLAR
TIEGLHRRFTAAFGAGTYCIEALLYCPDYIVRDPGIAGVAPERIVDATRKDQLAAVIQ
RALPPDEAPFDCAAKLHHFLSDHLALTPDASALVGQADTLVTRLSGGLAEWARRLSFE
PFRLRVTGTAGSGKTQLAIQVMKDALAQGRRVLYVCFNRPLADHIARVAPPGAKVATY
HQLCDWVVRDSGQEPDFASPDVFGWLDARFADVPPSDAWRFDVLIVDEGQDFRAHWVA
ALQRLLAPSGAWWWLEDPMQNLYMREPVPLPGWVTLNACVNYRSPREIFDYLREVIGP
SFTIESGSPFGGSDVSVSTYDGDDPLEPTKRAITQALSLGFRKQDIALLSFRGREKSR
FAALEQLGPHRLRSFTGRYDLFGNPEYRDGDVLYESIHRFKGQAAPCVILTEVDFDAF
DERAARKLFVGATRATMKLIVVMSTRAAARLPQR"
misc_feature 85686..85856
/locus_tag="RBRH_00004"
/note="Part of AAA domain; Region: AAA_19; pfam13245"
/db_xref="CDD:205425"
misc_feature 86313..86606
/locus_tag="RBRH_00004"
/note="Family description; Region: UvrD_C_2; pfam13538"
/db_xref="CDD:205716"
gene 86782..88398
/locus_tag="RBRH_00003"
/db_xref="GeneID:9985328"
CDS 86782..88398
/locus_tag="RBRH_00003"
/EC_number="6.3.2.2"
/codon_start=1
/transl_table=11
/product="glutamate--cysteine ligase"
/protein_id="YP_004027754.1"
/db_xref="GI:312794832"
/db_xref="GeneID:9985328"
/translation="MLKNTPAFPTTDGYARRLALLAQPAHRPLLAQGLRGVEKESLRV
QRDGTLAPTPHPAALGSALTHEQLTTDYSEALLEIITPAGHAVDAMLEQLDTLHRYVY
ESIGDELLWNASMPGVLPPDEQIPIAQYGTSNIGRLKHVYRRGLALRYGRAMQCIAGI
HYNFSLHEDIWRLLQQHERVDGSPLQYQSDAYLALIRNFRRSSWLLMLLFGASPALSR
SFVGERAHALDTWDADTLFLPYATSLRMSDLGYQNTSAQAALRADYNSLDGYLHNLAS
AVSQPYAPYEQLGTQRDGEWVQINTNVLQIENEFYSTIRPKRVTQPGERPLHALASRG
VQYIEVRLLDIDPFEATGISATTARFIEAYLLFCALDASALLHEAECTEAGNNFARVV
TQGRRPGLALSRGGRPVPLRDWALELLERIGPAAALLDAQEGGSRYGDALAAQRAKVE
DFALTPSARVLEDMRTTGRSFVRFALEHSAQHAAAMRARPLPRELHAHYAALAAHSLQ
QQAEIEHTEVGHFDQFIASYRAYTLNRTSV"
misc_feature 86824..88380
/locus_tag="RBRH_00003"
/note="glutamate--cysteine ligase; Provisional; Region:
PRK02107"
/db_xref="CDD:179369"
gene complement(88652..89881)
/locus_tag="RBRH_00002"
/db_xref="GeneID:9985327"
CDS complement(88652..89881)
/locus_tag="RBRH_00002"
/EC_number="2.1.1.63"
/codon_start=1
/transl_table=11
/product="ADA regulatory protein / O6-methylguanine-DNA
methyltransferase"
/protein_id="YP_004027755.1"
/db_xref="GI:312794833"
/db_xref="GeneID:9985327"
/translation="MNDRVNMPVCPADRAGSSRAVAPKSASKTYHSLVMTHDTASQSS
GAPGDYASDDARWAAVRAHDPCADGYFFFAVRTTGVFCRPSCKSRAPRRENVRFFESA
DAAMAEGFRACKRCQPLRAPREVELVARACSVLAERIDERVTLAQLGDAVHTSPYHLQ
RVFSRMMGISPRQYHANLRAERLRETLRSASSVTDAALGAGFESASPLRNAARGHLGM
TPSAYRRQGAGMTIAYAIASTRLGPILIAATERGLCKVAFGDDEASLLHALHEEFRHA
KRVCDPERLAHYVERIDAYLDGRADPTHLPFDGVATAFQRRVWDALRRIPYGQTRSYT
EVAAELGVPNAVRAVAAACAANPVALVIPCHRVVQKSGALAGYRWGLQRKAALLDAER
RDGDVRAATPGSETLDV"
misc_feature complement(88703..89743)
/locus_tag="RBRH_00002"
/note="bifunctional DNA-binding transcriptional dual
regulator/O6-methylguanine-DNA methyltransferase;
Provisional; Region: PRK15435"
/db_xref="CDD:185333"
misc_feature complement(89525..89722)
/locus_tag="RBRH_00002"
/note="Metal binding domain of Ada; Region:
Ada_Zn_binding; pfam02805"
/db_xref="CDD:145780"
misc_feature complement(89360..89479)
/locus_tag="RBRH_00002"
/note="Bacterial regulatory helix-turn-helix proteins,
AraC family; Region: HTH_AraC; pfam00165"
/db_xref="CDD:143933"
misc_feature complement(88958..89182)
/locus_tag="RBRH_00002"
/note="6-O-methylguanine DNA methyltransferase,
ribonuclease-like domain; Region: Methyltransf_1N;
pfam02870"
/db_xref="CDD:145821"
misc_feature complement(88706..88942)
/locus_tag="RBRH_00002"
/note="The DNA repair protein O6-alkylguanine-DNA
alkyltransferase (ATase; also known as AGT, AGAT and MGMT)
reverses O6-alkylation DNA damage by transferring O6-alkyl
adducts to an active site cysteine irreversibly, without
inducing DNA strand breaks. ATases...; Region: ATase;
cd06445"
/db_xref="CDD:119438"
misc_feature complement(order(88754..88756,88775..88777,88790..88792,
88814..88816,88820..88825,88832..88834,88838..88843,
88847..88849,88856..88858,88880..88885,88937..88942))
/locus_tag="RBRH_00002"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:119438"
misc_feature complement(order(88709..88711,88781..88783,88787..88792,
88883..88885))
/locus_tag="RBRH_00002"
/note="active site"
/db_xref="CDD:119438"
gene complement(89878..89976)
/locus_tag="RBRH_04068"
/db_xref="GeneID:9985326"
CDS complement(89878..89976)
/locus_tag="RBRH_04068"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027756.1"
/db_xref="GI:312794834"
/db_xref="GeneID:9985326"
/translation="MRYRNDSARYVVPANGGIDKVKHTPSIAKGPS"
gene 90217..91689
/locus_tag="RBRH_00764"
/db_xref="GeneID:9988042"
CDS 90217..91689
/locus_tag="RBRH_00764"
/codon_start=1
/transl_table=11
/product="Na+ driven multidrug efflux pump"
/protein_id="YP_004027757.1"
/db_xref="GI:312794835"
/db_xref="GeneID:9988042"
/translation="MPNMALSMNESNDRLPPCQSLSASPSHTPVSAVRWHRRVLALAV
PIILANLTQPILGAVDTAVAGHLPDPAYLGAVAAGGLFFNFVFWGFGFLRMGTTGLTA
QAFGARNSVALRATLLRASALAIVIGLVVLALSTPLIDTALRLIGGSDALQQYASDYC
HARIWAAPLALCNYVILGFLLGCQRVRVALLIQLFINAVNVAAVLLYVYVFDWRIAGI
GAATATADACGFVLGAWLLWRKRPRALPPLRWATLVDTSALRRLVALNRDIFVRTLCL
LTCFGWFAHAGAAQGDLVLAANALLLNFQTFMAYALDGFAHAAEALVGAAIGARQRDA
LRQAVRTTMVWGGLGALFFSLVYASGGEWIIGCLTDQHAVRDTAVRFLPWAAALPVIS
VWGFLFDGMFIGATRTRDLMWAMAISLAMFMLGAMTLPGLFGNDGLWASLLLFMAARG
ITLARVLPRLGAQLTGPTGAASRQRPCLSRPGSKSGDSSR"
misc_feature 90340..91593
/locus_tag="RBRH_00764"
/note="DNA-damage-inducible SOS response protein;
Provisional; Region: PRK10367"
/db_xref="CDD:182413"
misc_feature 90349..90801
/locus_tag="RBRH_00764"
/note="MatE; Region: MatE; pfam01554"
/db_xref="CDD:190033"
misc_feature <91204..91473
/locus_tag="RBRH_00764"
/note="MatE; Region: MatE; cl10513"
/db_xref="CDD:209159"
gene 91780..92061
/locus_tag="RBRH_00765"
/db_xref="GeneID:9985554"
CDS 91780..92061
/locus_tag="RBRH_00765"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027758.1"
/db_xref="GI:312794836"
/db_xref="GeneID:9985554"
/translation="MRRGARRIGDNPVTLDEHHTTTEDTFMGNAVSIALIVGGIVLLY
FGGTSLHSFSNDVSRLFTGTPTERTITLLAAGAVALVAGIVGLALSSRR"
misc_feature 91867..>91992
/locus_tag="RBRH_00765"
/note="Protein of unknown function (DUF3185); Region:
DUF3185; pfam11381"
/db_xref="CDD:151821"
gene complement(92123..92887)
/locus_tag="RBRH_00766"
/db_xref="GeneID:9985555"
CDS complement(92123..92887)
/locus_tag="RBRH_00766"
/EC_number="1.14.11.-"
/codon_start=1
/transl_table=11
/product="Hypophosphite dioxygenase"
/protein_id="YP_004027759.1"
/db_xref="GI:312794837"
/db_xref="GeneID:9985555"
/translation="MAEHFSKRGQVELLRQHGFVVVPGVLPASRCEAIKQAARAELAQ
PQGPVEFEADLCYPGAPQSHTAPGGNTVRRLLDAYARNALYRQWATSTEIRGWMELYF
GEQVALSRAHHNCMMTKHPTYGSLTGWHRDIRYWAFKREDLISVWLALGTETVENGAL
WFVPGSHAVDFAPERFDEAKFFRADVPENAALISTAVSPALNPGDVVFFHCNTLHSAG
KNLADDVKFSLVFTYHGVSNAPVPGTRSAAKPEVPL"
misc_feature complement(92204..92848)
/locus_tag="RBRH_00766"
/note="Phytanoyl-CoA dioxygenase (PhyH); Region: PhyH;
pfam05721"
/db_xref="CDD:203318"
gene 93083..93454
/locus_tag="RBRH_00767"
/db_xref="GeneID:9985556"
CDS 93083..93454
/locus_tag="RBRH_00767"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027760.1"
/db_xref="GI:312794838"
/db_xref="GeneID:9985556"
/translation="MIMSARLSKRMSVTVWHAAHITRIAQRRAARSLRHHVARTRALT
ARLSRDIAQRWSGSVRAWVHSLVHLRLYSIWRASLGRSVRVTPARALRHPRQTPHLRL
VRTPRRHAPPSGPWSPYFGGR"
gene 93460..93705
/locus_tag="RBRH_00768"
/db_xref="GeneID:9985557"
CDS 93460..93705
/locus_tag="RBRH_00768"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027761.1"
/db_xref="GI:312794839"
/db_xref="GeneID:9985557"
/translation="MNACGSSPILVARHESMEHAMSGNFTAGEFIILAPMALAGAFAL
GMLPVASRFTANVLRLLGALLGVVFAIVLVEGLPLFA"
gene complement(93750..95402)
/locus_tag="RBRH_00769"
/db_xref="GeneID:9985558"
CDS complement(93750..95402)
/locus_tag="RBRH_00769"
/codon_start=1
/transl_table=11
/product="Type I secretion outer membrane protein"
/protein_id="YP_004027762.1"
/db_xref="GI:312794840"
/db_xref="GeneID:9985558"
/translation="MERDADNAPAYRAVYAAHCAAGRSTGRAPHPVTGMSMHLDFCYF
PAARRGAAAPCRAPVLRCALALALLLTGCAVGPDYTRPSVTVPASFKEATPGWKVAQP
ADHQDRGNWWAIYRDTQLDTLMDRLNAANQTVAQFAAAYRQARALTAEARASGFPTLS
GSASGSRAGSGSASHGTTTSGVAAGHSRVSNSFSTSLDASWEADLWGGIARAVASQKA
GQQAAAAALANARLSAQAALAQNYYLLRTSDAQQKVLDETVAAYQRTLELTQNQYKQG
IVPRSDVIQAQTQLQSAQSVALGNGIDRAQYEHAIAVLVGEPASTFSLPPAPLDVTPP
AIPVSLPSALLERRPDVASAERKAAAANEQIGVAMAAFFPSLTLSAQEGFSSSVLAQL
VRAPSRFWSLGPELAASIFDAGLRSAKLDAARAAYDEQVAVYRQTVLAALQEVEDNLT
SLRILAQQIALQQASVDSAQQALDIVLNQYKAGTVAYLSVLTAQASLLSAQQALQSLA
GQRMTASVGLIKALGGGWDVARLDTETGSVAAPTAASEVSRN"
misc_feature complement(93828..95192)
/locus_tag="RBRH_00769"
/note="efflux transporter, outer membrane factor (OMF)
lipoprotein, NodT family; Region: outer_NodT; TIGR01845"
/db_xref="CDD:162557"
gene 95518..95664
/locus_tag="RBRH_00770"
/db_xref="GeneID:9985559"
CDS 95518..95664
/locus_tag="RBRH_00770"
/codon_start=1
/transl_table=11
/product="multidrug resistance protein B"
/protein_id="YP_004027763.1"
/db_xref="GI:312794841"
/db_xref="GeneID:9985559"
/translation="MLNQIVTQQRMMMAANDFFRLSCLAFIVLASLVWITKPRRGIGL
APRH"
gene complement(95702..96481)
/locus_tag="RBRH_00771"
/db_xref="GeneID:9985560"
CDS complement(95702..96481)
/locus_tag="RBRH_00771"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027764.1"
/db_xref="GI:312794842"
/db_xref="GeneID:9985560"
/translation="MFFFWHRIARTLPWIIVGGLAVLITLLCIAPAAWITPQFGRATG
GHVNLVDPAGSLWHGSATLLLAPGSDRANSTLLPGRVEWHTAFWPLFGGRLHMTLQHT
EAMHQPVTLDASRSQAVLGAGSLALPATLLTGLGAPFNTLDLQGDVRLSWTDMRVLNQ
QAYGQLTVLLTDMASRVSLVRPLGSYRVTLLAQGPAATLQLATLRGPLQLNGAGQWQR
GHFAFNGAARSTSEARGSLAGLLNLLGRRIDDATYAITFAR"
misc_feature complement(95711..96322)
/locus_tag="RBRH_00771"
/note="Type II secretion system (T2SS), protein N; Region:
T2SN; pfam01203"
/db_xref="CDD:189887"
gene complement(96497..97027)
/locus_tag="RBRH_00772"
/db_xref="GeneID:9985561"
CDS complement(96497..97027)
/locus_tag="RBRH_00772"
/codon_start=1
/transl_table=11
/product="general secretion pathway protein M"
/protein_id="YP_004027765.1"
/db_xref="GI:312794843"
/db_xref="GeneID:9985561"
/translation="MDDQECAMKSKSAVATALGDFWDERAPREKKMITIGGAVLALIV
LYSVALDPALSGRAKLRADLPAMQRRLAQMTADANEAHLLAARAQGSAPTGNALKEAL
AASLAQRALVATQLSVAGPNVQLQLKNAQFGSWVAWLNDVRRQFKVKASEAHVIALKD
DGQVDVTATLQPANTK"
misc_feature complement(96509..96967)
/locus_tag="RBRH_00772"
/note="Type II secretion system (T2SS), protein M; Region:
T2SM; pfam04612"
/db_xref="CDD:146989"
gene complement(97003..98505)
/locus_tag="RBRH_00773"
/db_xref="GeneID:9985562"
CDS complement(97003..98505)
/locus_tag="RBRH_00773"
/codon_start=1
/transl_table=11
/product="general secretion pathway protein L"
/protein_id="YP_004027766.1"
/db_xref="GI:312794844"
/db_xref="GeneID:9985562"
/translation="MSDAPAPRRNFLPCHSTPSSNEDCFLTTLIVQLPPRDPAVPSQE
WQLPDLPFLLLDKHGRTQRAGRASLALLPRATRTVLMLAARDLLMLAATVPPLNGPRL
RQALPNVIEDHLIQDPQTCHIALDPAGPIDGKRVIAAIDRGWFRFICDAFRSAGHTSL
RAVPITRCLPQPGAVQHALDAIDSQAAAGAALPRAAADGSGPAPSNAEPGDETGVPAH
LPIVAAILGDVVRTQPAALLGEPGELSGAFGPHWELALARGALGEGFAVPVDALEPTL
AALAADAPVTLYCLTGVPGSEPRAGCGGNDAAALATHLEVLPLTFETLARNALAQDFD
LCQFEFAPQLWNLSGATLARWRLPIALALASIVVAVIGVNVQWLMLARQRDAINAQMT
ELLLSAFPKTTVVLDPADQMTRQLDQLRLAAGEPAPDDFLSLADALARSLGPVPSNTI
AQLDYRNRSLEVTFKPSVTVDNGLTQRLARNGVAGEVDTSTGKWTIRSAR"
misc_feature complement(<97981..98421)
/locus_tag="RBRH_00773"
/note="Type II secretion system (T2SS), protein L; Region:
T2SL; pfam05134"
/db_xref="CDD:203173"
misc_feature complement(97012..98409)
/locus_tag="RBRH_00773"
/note="type II secretion system protein L; Region:
typeII_sec_gspL; TIGR01709"
/db_xref="CDD:162498"
misc_feature complement(97006..97461)
/locus_tag="RBRH_00773"
/note="GspL periplasmic domain; Region: GspL_C; pfam12693"
/db_xref="CDD:193169"
gene complement(98498..99631)
/locus_tag="RBRH_00774"
/db_xref="GeneID:9985563"
CDS complement(98498..99631)
/locus_tag="RBRH_00774"
/codon_start=1
/transl_table=11
/product="general secretion pathway protein K"
/protein_id="YP_004027767.1"
/db_xref="GI:312794845"
/db_xref="GeneID:9985563"
/translation="MTMHAHRRPDLLHCARPPRRTRAERGAAIITALFVVALAAILVS
GMLWRQQVQIRRIENQRLLAQARWISRGATDWTRLILRSEGDTAPGFTYLGGIWSVPI
ARTRLSDFLGQIGEVRAEEGAATYLSGSIEDAQARFNLRNLATIPRPGVIAVDPNQLL
VLQRLLSSLGLDGQLAGRVASAVRDSLAGSATRFQVNAQTPFGASGVPAQQAAAGSAI
GGELTDKPGLEGGNDASARRPIQMVEATALLDVAGFTPEMVARLKPFVIVLPTRTVLN
MNTASAEVIAASIPGMSIGAAQALVARRSTVFFRNTGEVQLALQAAGIPAVEKNLNTI
GVDTNYFIVHGKVQHERAELIRTTLIYRDALTKTTRVVSVRDE"
misc_feature complement(98522..99487)
/locus_tag="RBRH_00774"
/note="Type II secretion system (T2SS), protein K; Region:
T2SK; pfam03934"
/db_xref="CDD:146520"
gene complement(99628..100287)
/locus_tag="RBRH_00775"
/db_xref="GeneID:9985564"
CDS complement(99628..100287)
/locus_tag="RBRH_00775"
/codon_start=1
/transl_table=11
/product="general secretion pathway protein J"
/protein_id="YP_004027768.1"
/db_xref="GI:312794846"
/db_xref="GeneID:9985564"
/translation="MKPAARSDRQRGFTLIELLVAIAILAVIAVLSWRGLDSIMRSRE
AISRSMEDERVLAQLFDQMRADARQAATDDQAGTAAVAIGNGELRIVRLLFAQDSAPR
LQVVRYRLDNGRILRLASPPIATQGQLRSALRGGAEGWSEVSLIGGVSAMRMRLFVPQ
VGWTRSMADVDATIAKSMNNLKIPGLNAAPLLRAATGLEVTLRAPQVSAPLTRVLLIG
E"
gene complement(100265..100675)
/locus_tag="RBRH_00776"
/db_xref="GeneID:9985565"
CDS complement(100265..100675)
/locus_tag="RBRH_00776"
/codon_start=1
/transl_table=11
/product="general secretion pathway protein I"
/protein_id="YP_004027769.1"
/db_xref="GI:312794847"
/db_xref="GeneID:9985565"
/translation="MAMAASRCVEMRRGIRGFTMIEVLVALAIIAIALAASLRAVGVL
AVNSSELDKRMYAGWSADNELARLHLMKAWPDIGSRTFDCSQGNLALRCTERVSATPN
PIFRRVEVFVATPGQSGYLVQMVTVIANETGRSL"
misc_feature complement(100331..100627)
/locus_tag="RBRH_00776"
/note="type II secretion system protein I; Region: gspI;
TIGR01707"
/db_xref="CDD:162497"
misc_feature complement(100286..100525)
/locus_tag="RBRH_00776"
/note="Type II secretion system (T2SS), protein I; Region:
T2SI; pfam02501"
/db_xref="CDD:202261"
gene complement(100647..101258)
/locus_tag="RBRH_00777"
/db_xref="GeneID:9985566"
CDS complement(100647..101258)
/locus_tag="RBRH_00777"
/codon_start=1
/transl_table=11
/product="general secretion pathway protein H"
/protein_id="YP_004027770.1"
/db_xref="GI:312794848"
/db_xref="GeneID:9985566"
/translation="MVSQAVRATTLTSVRGSSARADAPAMARVMSVAMIARRAAACGA
GRVQPCRGARAVAGFTLLEMLVVLVIAGILISMATLTATRNPRTDLNEQAQRLALLFE
SAGDEAQVRSQPIAWVPVAGGYRFEARTADGWRALRDDLLASRRWDTEVTGVAIRYPG
SDETVSRIVFGVESIDTPVEVTLYSAIGQVSIVGNGNGRFEVR"
misc_feature complement(101037..101108)
/locus_tag="RBRH_00777"
/note="Type IV pilin N-term methylation site GFxxxE;
Region: N_methyl_2; pfam13544"
/db_xref="CDD:205722"
misc_feature complement(100650..101099)
/locus_tag="RBRH_00777"
/note="type II secretion system protein H; Region:
typeII_sec_gspH; TIGR01708"
/db_xref="CDD:130769"
gene complement(101206..101760)
/locus_tag="RBRH_00778"
/db_xref="GeneID:9985567"
CDS complement(101206..101760)
/locus_tag="RBRH_00778"
/codon_start=1
/transl_table=11
/product="general secretion pathway protein G"
/protein_id="YP_004027771.1"
/db_xref="GI:312794849"
/db_xref="GeneID:9985567"
/translation="MVATRDRSMSADAPARRDGFFPVNSSNEVGMQYARPTIRRQAGT
PAHRQRGFTLIEIMVVIAILGILAALVVPKIMSRPDQARRVAAGQDIHTIMDALKLYR
LDNGRYPTQEQGLRALIQKPATDPVPNNWKEGGYLEKLPNDPWGNPYQYLNPGVHGEI
DVFSYGADGKPGGEGNDADIGSWQ"
misc_feature complement(101545..101616)
/locus_tag="RBRH_00778"
/note="prepilin-type N-terminal cleavage/methylation
domain; Region: IV_pilin_GFxxxE; TIGR02532"
/db_xref="CDD:211747"
misc_feature complement(101209..101613)
/locus_tag="RBRH_00778"
/note="type II secretion system protein G; Region:
typeII_sec_gspG; TIGR01710"
/db_xref="CDD:130771"
misc_feature complement(101212..101535)
/locus_tag="RBRH_00778"
/note="Type II secretion system (T2SS), protein G; Region:
T2SG; pfam08334"
/db_xref="CDD:192005"
gene 101911..102342
/locus_tag="RBRH_00779"
/db_xref="GeneID:9985568"
CDS 101911..102342
/locus_tag="RBRH_00779"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027772.1"
/db_xref="GI:312794850"
/db_xref="GeneID:9985568"
/translation="MNFLTQRLAVRLASLALFAVLCASVTYWVITLRSRDTAPLPAAA
PGRLPVTTDAAQTLFGSHAGDTRAPNIHLSGILALADGAAAIVSYGTDPARAISLNSP
IARGVKLVAVRQRSIVVERNGGRSEIFLPPNAPGQPTIYVR"
gene complement(102388..103605)
/locus_tag="RBRH_00780"
/db_xref="GeneID:9985569"
CDS complement(102388..103605)
/locus_tag="RBRH_00780"
/codon_start=1
/transl_table=11
/product="general secretion pathway protein F"
/protein_id="YP_004027773.1"
/db_xref="GI:312794851"
/db_xref="GeneID:9985569"
/translation="MPAFRFEAIDATGKSQRGVVEADSARAARAQLRTQGLTPLLVEA
AGSRERGQRGQRLVWGRKLSQREQALFTRQLASLLIAGLPLDEALAVLTDQAEREYIR
ELIAAIRAEVLGGQSLAGALAQHPRDFPDIYRALVSAGEHTGKLGLVLSRLADYIEQR
NALRSKIQLAFTYPAIVTLVAFGIVTFLLSYVVPQVVSVFASTKQQLPLLTVMMMSLS
SFVRHGWWAILLIVVVTVWLVRRILQQSGPRLAFDRWLLGAPLAGKLVRGYNTVRFAS
TLGILTAAGVPILRALQAAGETLNNRAMRSLVDEAIVRVREGTSLSRALGNTRTFPPV
LVHLIRSGEATGDVTSMLDRASEGEALELERRTMFLTSLLEPLLILAMGGVVLVIVLA
VMLPIIELNNMVG"
misc_feature complement(102394..103596)
/locus_tag="RBRH_00780"
/note="type II secretion system protein F; Region: GspF;
TIGR02120"
/db_xref="CDD:162711"
misc_feature complement(103024..103395)
/locus_tag="RBRH_00780"
/note="Type II secretion system (T2SS), protein F; Region:
T2SF; pfam00482"
/db_xref="CDD:201255"
misc_feature complement(102418..102786)
/locus_tag="RBRH_00780"
/note="Type II secretion system (T2SS), protein F; Region:
T2SF; pfam00482"
/db_xref="CDD:201255"
gene complement(103618..105144)
/locus_tag="RBRH_00781"
/db_xref="GeneID:9985570"
CDS complement(103618..105144)
/locus_tag="RBRH_00781"
/codon_start=1
/transl_table=11
/product="general secretion pathway protein E"
/protein_id="YP_004027774.1"
/db_xref="GI:312794852"
/db_xref="GeneID:9985570"
/translation="MTPALSVQTGPSMRTVTASSETVAEREPPSPLAARLLPYAFARS
GQILIAHQHASGLDVWISERTSAAALAEVARNFGALTLTRLPSDELTQAINNAYARQD
GSAAQVVGEVEGEVDLSRLMQDIPEVEDLLESEDDAPIIRMINALLTQAAREGASDIH
IEPFENTSVVRFRVDGTLRDVVRPKKALHGALISRIKIMAQLDIAEKRLPQDGRITLR
VGGRPVDVRVSTLPTGHGERAVLRLLEKDAQRLNLERLGMGPDTLAQFDKLIGRPHGI
VLVTGPTGSGKTTTLYAALSRLETETSNIMTVEDPIEYDLSGIGQTQVNDRIGMNFAR
ALRSILRQDPDIIMIGEIRDLETAQIAVQASLTGHLVLATLHTNDAASAVTRLTDMGV
EPYLLASSLLGVLAQRLVRQLCPVCKRQSVDDGRMQWHPVGCDKCGHCGYTGRRGVYE
LLLIDDAIRTLIHRNASDAELLQRARASGMRTLREDAQRWLDTGVTSLEEVLRVTGGE
"
misc_feature complement(104833..>105072)
/locus_tag="RBRH_00781"
/note="Type II secretion system (T2SS), protein E,
N-terminal domain; Region: T2SE_Nter; pfam05157"
/db_xref="CDD:203183"
misc_feature complement(103630..105045)
/locus_tag="RBRH_00781"
/note="type II secretion system protein E; Region:
type_II_gspE; TIGR02533"
/db_xref="CDD:131585"
misc_feature complement(103810..104562)
/locus_tag="RBRH_00781"
/note="PulE/GspE The type II secretory pathway is the main
terminal branch of the general secretory pathway (GSP).
It is responsible for the export the majority of
Gram-negative bacterial exoenzymes and toxins. PulE is a
cytoplasmic protein of the GSP, which...; Region:
PulE-GspE; cd01129"
/db_xref="CDD:29995"
misc_feature complement(104281..104304)
/locus_tag="RBRH_00781"
/note="Walker A motif; other site"
/db_xref="CDD:29995"
misc_feature complement(order(104092..104097,104215..104220,
104224..104226,104281..104289,104299..104301))
/locus_tag="RBRH_00781"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:29995"
misc_feature complement(104092..104109)
/locus_tag="RBRH_00781"
/note="Walker B motif; other site"
/db_xref="CDD:29995"
gene complement(105141..107684)
/locus_tag="RBRH_00782"
/db_xref="GeneID:9985571"
CDS complement(105141..107684)
/locus_tag="RBRH_00782"
/codon_start=1
/transl_table=11
/product="general secretion pathway protein D"
/protein_id="YP_004027775.1"
/db_xref="GI:312794853"
/db_xref="GeneID:9985571"
/translation="MTQNRFPARRMARSLLVAGLIAAVLGASPARAQVTLNFVDADID
QVAKAIGAATNKTIIVDPRVKGQLNLVSEQPVPREQALKTLQSALRMQGFALVQDHGV
LKVVPEADAKLQGVPTYIGNTTPARGDQVVTQVFQLRNESANNLLPVLRPLISPNNQV
AAYPSNNTLVVTDYADNVRRIGQIIQGIDTSAGAQVQIVPLKNASAVDVAQQLGKLLD
PGAIGGTDATLRVSVNADPRTNSVLLRAASPSRLAAAKSLIATLDAPTTQPGNIHVVP
LRNAEAVRMAKTLRGMLGGSRGATGSESQSSGGKSDSFGGGLGSSTGVSGLPPLPSGS
SSAMSRNPLSGSGGAGGFGSGQSRDQSFSDKESSNDDNAQGGIVQADPATNSLIITAP
EPLYRNIRNVIDQLDQRRAQVYIEAVIVDMNATSGANLGIQWQGALLSNNGNNGVYGG
SNFNANGSQSIVGLSATGAIVAQDPATAAAQIGPNNLLNNGLNIGLLHRFGKVFGLGG
LLQALATSSDTNILSTPNLITLDNEEARIVVGQNVPVVTGSYATPTANTTTSVSAFNT
FDRQDVGITLHIKPQISEGGVLKLQIYQEDSAVQQGTQSNPGGVSITKRSIQSTVLAD
DGEIIVLGGLIQDNYANGNSKVPWLGNIPVLGSLFRSESKTRTKSNLMVFLRPVIVRD
QSTSSQLALDRYEYLRAEQAAYQSDNRIVKDRETPLLPPAPLGPNEGGGPAANNVFDL
RSAYGRSGPHHGNGADARGNGAAATSVSPPVDAPDASVGNADAPVGAPGASVGNADAF
VGAPDASVSNADALVGAPNASVSHAPAPVGASPAPASPADSTVAPGQHP"
misc_feature complement(105639..107579)
/locus_tag="RBRH_00782"
/note="type II secretion system protein D; Region:
type_II_gspD; TIGR02517"
/db_xref="CDD:162900"
misc_feature complement(107118..107288)
/locus_tag="RBRH_00782"
/note="Bacterial type II/III secretion system short
domain; Region: Secretin_N; pfam03958"
/db_xref="CDD:202830"
misc_feature complement(<106965..107099)
/locus_tag="RBRH_00782"
/note="Bacterial type II/III secretion system short
domain; Region: Secretin_N; pfam03958"
/db_xref="CDD:202830"
misc_feature complement(106455..>106586)
/locus_tag="RBRH_00782"
/note="Bacterial type II/III secretion system short
domain; Region: Secretin_N; pfam03958"
/db_xref="CDD:202830"
misc_feature complement(105642..106151)
/locus_tag="RBRH_00782"
/note="Bacterial type II and III secretion system protein;
Region: Secretin; pfam00263"
/db_xref="CDD:201120"
gene 107691..107807
/locus_tag="RBRH_00783"
/db_xref="GeneID:9985572"
CDS 107691..107807
/locus_tag="RBRH_00783"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027776.1"
/db_xref="GI:312794854"
/db_xref="GeneID:9985572"
/translation="MVFGAGRAVLSPINYASSLVWHRKDAMRNAKVATLTAF"
gene 108137..108631
/locus_tag="RBRH_00784"
/db_xref="GeneID:9985573"
CDS 108137..108631
/locus_tag="RBRH_00784"
/codon_start=1
/transl_table=11
/product="Invasion protein IAGB"
/protein_id="YP_004027777.1"
/db_xref="GI:312794855"
/db_xref="GeneID:9985573"
/translation="MYTPGAALKLLLFETMNLRSITSIAFAASVLALTSPRAHADCFD
NAAAYHHVNPLILRAIAWQESHNRPDALHKNANGSTDYGLMQINSIHLPKLASYGISH
QTLMEPCKAVYIAAWHLRRQMDKYGNTWQAVGSYHSETPALRDKYAKQIMAILNKWNL
LAQR"
misc_feature <108152..108568
/locus_tag="RBRH_00784"
/note="Soluble lytic murein transglycosylase and related
regulatory proteins (some contain LysM/invasin domains)
[Cell envelope biogenesis, outer membrane]; Region: MltE;
COG0741"
/db_xref="CDD:31084"
misc_feature 108296..108589
/locus_tag="RBRH_00784"
/note="Lytic Transglycosylase (LT) and Goose Egg White
Lysozyme (GEWL) domain. Members include the soluble and
insoluble membrane-bound LTs in bacteria, the LTs in
bacteriophage lambda, as well as, the eukaryotic
'goose-type' lysozymes (GEWL). LTs catalyze...; Region:
LT_GEWL; cd00254"
/db_xref="CDD:29556"
misc_feature order(108326..108328,108398..108400,108488..108490,
108542..108544)
/locus_tag="RBRH_00784"
/note="N-acetyl-D-glucosamine binding site [chemical
binding]; other site"
/db_xref="CDD:29556"
misc_feature 108326..108328
/locus_tag="RBRH_00784"
/note="catalytic residue [active]"
/db_xref="CDD:29556"
gene 108662..109975
/locus_tag="RBRH_00785"
/db_xref="GeneID:9985574"
CDS 108662..109975
/locus_tag="RBRH_00785"
/codon_start=1
/transl_table=11
/product="Low-affinity zinc transport protein"
/protein_id="YP_004027778.1"
/db_xref="GI:312794856"
/db_xref="GeneID:9985574"
/translation="MAMTFAPLPVTVLCGFLGAGKTTLLNHILANRAGLRVAVIVNDV
ASVNIDAQLVRGASELSHVDERLVELSNGCICCTLRDDLLREVKRLAAENRFDAILIE
STGIAEPLPIAETFTFVDDDGVALADLARLDTLVTVVDACHFLRDYESTDALADRGMA
VDAGDDRALVELLIEQVEFCDVLVLNKADLVSADELSRLRHILARINPRARQVVSRFA
DVPLAEVFNTGRFDFDLAASAPGWLASLHHDHPGEADAFGIGNVVYRSRRPFHPQRFW
DLLHNETAWRGVLRSKGFFWLATRNDLAGTLSQAGTVCRHGPAGTWWAAQPRDTWPQD
DAFLSELKTDWHGDWSDPTIGDRRQELVLIGAHLDRDAWQARLDACVLTDAQWQAGQK
GANPSAWQGFADPFPRWSEAFDHVNDVDDPPGNAPGSPAFASRSI"
misc_feature 108683..109810
/locus_tag="RBRH_00785"
/note="Putative GTPases (G3E family) [General function
prediction only]; Region: COG0523"
/db_xref="CDD:30869"
misc_feature 108686..109303
/locus_tag="RBRH_00785"
/note="CobW/HypB/UreG, nucleotide-binding domain; Region:
cobW; pfam02492"
/db_xref="CDD:202255"
misc_feature 109436..109801
/locus_tag="RBRH_00785"
/note="Cobalamin synthesis protein cobW C-terminal domain;
Region: CobW_C; smart00833"
/db_xref="CDD:197902"
gene complement(110078..110356)
/locus_tag="RBRH_00786"
/db_xref="GeneID:9985575"
CDS complement(110078..110356)
/locus_tag="RBRH_00786"
/codon_start=1
/transl_table=11
/product="DNA-binding protein HU"
/protein_id="YP_004027779.1"
/db_xref="GI:312794857"
/db_xref="GeneID:9985575"
/translation="MNKQELIDAVAAQTGASKAQTGETLDTLLEIIKTVVSKGDSVQL
IGFGSFGSGKRAARTGRNPKTGETIKIPAAKTVKFTAGKAFKDVVNER"
misc_feature complement(110096..110353)
/locus_tag="RBRH_00786"
/note="Integration host factor (IHF) and HU are small
heterodimeric members of the DNABII protein family that
bind and bend DNA, functioning as architectural factors in
many cellular processes including transcription,
site-specific recombination, and...; Region: HU_IHF;
cd00591"
/db_xref="CDD:29683"
misc_feature complement(order(110108..110110,110117..110119,
110123..110125,110135..110137,110165..110176,
110183..110185,110189..110194,110198..110200,
110210..110212,110219..110224,110228..110230,
110234..110236,110279..110281,110345..110353))
/locus_tag="RBRH_00786"
/note="IHF - DNA interface [nucleotide binding]; other
site"
/db_xref="CDD:29683"
misc_feature complement(order(110114..110116,110120..110122,
110132..110137,110201..110203,110216..110221,
110228..110242,110252..110257,110264..110269,
110276..110278,110318..110320,110330..110332,
110339..110341,110348..110353))
/locus_tag="RBRH_00786"
/note="IHF dimer interface [polypeptide binding]; other
site"
/db_xref="CDD:29683"
gene 110701..112689
/locus_tag="RBRH_00787"
/db_xref="GeneID:9985576"
CDS 110701..112689
/locus_tag="RBRH_00787"
/EC_number="2.1.1.-"
/codon_start=1
/transl_table=11
/product="tRNA (5-aminomethyl-2-thiouridylate)
methyltransferase / tRNA
(5-carboxymethylaminomethyl-2-thiouridylate) oxidase TrmC"
/protein_id="YP_004027780.1"
/db_xref="GI:312794858"
/db_xref="GeneID:9985576"
/translation="MTGPLIAAQLALREDGIPYSPLFDDVYHSAMGGIGQALHVFVAG
NRLPANWQHKAVFSIVETGFGLGLNFLVTWSQWRGDPSRCDRLHFVSVEKHPFSRDDL
DTLLTRLLDSHAELAGLARKLVRAWPMLTPGIHRLAFDDGRVTLTLALGDAAQMLPKL
AVRADAFYLDGFSPAKNDALWSPAIFKALARMAEVGATFATYTSAGKVKAALTGAGFV
HRKARGYGTKRDMLVGEFAPAYRVRRHEPPPRAAWTHRHAIVVGAGLAGCAVAERLAA
RGWAITLLEQRDAPASEASGNPAGVFHPMIARAMTPAMRLSSAGFLYALRAWQALADA
GHALHWHAGGLLQLAQDDVDAAALRDAIVAAGLPAGFAVAVDRDAASAYAGVTLERGG
IWFPRGGWIAPPSLCRAQLAAARTTLAANGQSLAWRTLFGVRVEQLVHDVEGWHALDA
AGGRIATAPVVVIANAHDAIRLGHLAHAPVRSARGQLTILPHAAPPSLRMPVIGDGYA
LALDNGRLMTGASYDMDDAGLDERRASHDENISRLRALIPGIAPSVDWARVQGRVGLR
CVVSDRLPMVGPLADEADPMAAGASQSGARLPELQRRPGLYGAFAYGSRGLVWAAISG
ELLASQINGEPWPLERDLADALDPARYLLRTLRATAQR"
misc_feature 110701..112671
/locus_tag="RBRH_00787"
/note="bifunctional tRNA
(mnm(5)s(2)U34)-methyltransferase/FAD-dependent
cmnm(5)s(2)U34 oxidoreductase; Reviewed; Region: mnmC;
PRK01747"
/db_xref="CDD:179330"
misc_feature 110701..111459
/locus_tag="RBRH_00787"
/note="Uncharacterized conserved protein [Function
unknown]; Region: COG4121"
/db_xref="CDD:33878"
gene 112731..112895
/locus_tag="RBRH_04067"
/db_xref="GeneID:9985577"
CDS 112731..112895
/locus_tag="RBRH_04067"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027781.1"
/db_xref="GI:312794859"
/db_xref="GeneID:9985577"
/translation="MVIHLVLWITAWVTGARHVDSFWVTAGRDLASTKLFGKSNARRT
FSPKTSQYGK"
gene complement(113222..113332)
/locus_tag="RBRH_04066"
/db_xref="GeneID:9988041"
CDS complement(113222..113332)
/locus_tag="RBRH_04066"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027782.1"
/db_xref="GI:312794860"
/db_xref="GeneID:9988041"
/translation="MSTSIIVVQSMLDSMHSKVWCMLKAGMRQLDQQTVL"
gene 113934..115157
/locus_tag="RBRH_00790"
/db_xref="GeneID:9988040"
CDS 113934..115157
/locus_tag="RBRH_00790"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027783.1"
/db_xref="GI:312794861"
/db_xref="GeneID:9988040"
/translation="MTGEGITMKSAFSFFPSWPLVPDAVFYAGLILLVAGLCGEACWR
AFRLPRITGYAIIGLVASGTGAHAIDETLGFSTRLLMDVALGLLLFELGSRVDLRWLR
KNPWLIVSSLAEGALTFITVLGALLFLKMPVVEATVLAAIAIATSPAMVIQLKTELRA
QGQVTQRLLTLAALNSMYAVVLVKLVSGWLHQEYYGNAFATIVQPIYLIAGSSVLAYG
LARSCNFLYRRIGLQDEHSFVAVFGLVLLAIAIAHLFKLSTVLALLAAGIIFKNLDER
PQLWPEHFGSAGWLLTVILFVLTLLSFQWSQIAMGGLAALVLIVARFVAKLVGVLAFA
KPSGIDLRQGTALGVSLAPMSALAYLLMDDTYALYPDFDPAFRAVLMCSIVMLQLTAP
LLVYWGLARAGERRQ"
misc_feature 114000..115016
/locus_tag="RBRH_00790"
/note="Kef-type K+ transport systems, membrane components
[Inorganic ion transport and metabolism]; Region: KefB;
COG0475"
/db_xref="CDD:30823"
misc_feature 114015..115016
/locus_tag="RBRH_00790"
/note="Sodium/hydrogen exchanger family; Region:
Na_H_Exchanger; pfam00999"
/db_xref="CDD:201544"
gene 115228..116349
/locus_tag="RBRH_00791"
/db_xref="GeneID:9985578"
CDS 115228..116349
/locus_tag="RBRH_00791"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027784.1"
/db_xref="GI:312794862"
/db_xref="GeneID:9985578"
/translation="MIMALEPFINSEPFTFGVELEIQVVNTHDYDLTKAASDLMRLIK
VQKAPGAVTPEITESMIELSTGICHSHAQALDELRVIRDMLVSAADQLNVGLCGGGTH
AFQQWNERQIFDMPRFQYLSELYGYLAKQFTVFGQHVHVGCPDADSALFLLHSMSRYI
PHFIALSASSPYVQGVDTGFHSARLNSVFAFPLSGRAPYELTWEGFETYFSKMVSTGV
VNSMKDFYWDIRPKPGYGTIEVRVMDTPLSIDRAAAIAAYIQALARYLLLDRPLTLSE
DDYLVYTFNRFEACRFGLSGVLVNPQTRERRTIGEDILTTLAALEPHARALGSIDALT
DIERIARGGENDATWLRNVFEQEQSLPEVVRQQTLRWRG"
misc_feature 115234..116346
/locus_tag="RBRH_00791"
/note="gamma-glutamyl:cysteine ligase; Provisional;
Region: PRK13516"
/db_xref="CDD:184106"
misc_feature 115270..116124
/locus_tag="RBRH_00791"
/note="carboxylate-amine ligase, YbdK family; Region:
gshA_cyan_rel; TIGR02050"
/db_xref="CDD:162674"
gene complement(116387..116479)
/locus_tag="RBRH_00792"
/db_xref="GeneID:9985579"
CDS complement(116387..116479)
/locus_tag="RBRH_00792"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027785.1"
/db_xref="GI:312794863"
/db_xref="GeneID:9985579"
/translation="MGLFVIQQVDPGVTTTRHTAGIAKQLPTQR"
gene 116608..116898
/locus_tag="RBRH_00793"
/db_xref="GeneID:9985580"
CDS 116608..116898
/locus_tag="RBRH_00793"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027786.1"
/db_xref="GI:312794864"
/db_xref="GeneID:9985580"
/translation="MLYTTVIVVNKGVPAAWKTTKNNIISMRYENNNNRNDGVATVDR
DEQMLACYYRRALVQNRCTVINAVFPLDYPQFMSARDMTYHPGSHRMDTPTR"
gene 117193..117699
/locus_tag="RBRH_00794"
/db_xref="GeneID:9985581"
CDS 117193..117699
/locus_tag="RBRH_00794"
/codon_start=1
/transl_table=11
/product="MarR family transcriptional regulator"
/protein_id="YP_004027787.1"
/db_xref="GI:312794865"
/db_xref="GeneID:9985581"
/translation="MLLMQRKGPMRLGEIARETALTPATTSDAVSTLESKGLVEKRRA
LDDGRALAVRLSARGKTAAKKALQWPDFIGHALGVLRPEEQSHFYRSLLKMIWQMQEK
DHIPRHRMCVSCTHFGPSKTPKKTPHRCELLDLSMGDTDLRLDCSVFEEADVPTQKRT
WKIFSQAA"
misc_feature <117193..117486
/locus_tag="RBRH_00794"
/note="Transcriptional regulators [Transcription]; Region:
MarR; COG1846"
/db_xref="CDD:32031"
misc_feature 117193..117372
/locus_tag="RBRH_00794"
/note="Arsenical Resistance Operon Repressor and similar
prokaryotic, metal regulated homodimeric repressors. ARSR
subfamily of helix-turn-helix bacterial transcription
regulatory proteins (winged helix topology). Includes
several proteins that appear to...; Region: HTH_ARSR;
cd00090"
/db_xref="CDD:28974"
misc_feature order(117223..117225,117232..117234,117370..117372)
/locus_tag="RBRH_00794"
/note="putative Zn2+ binding site [ion binding]; other
site"
/db_xref="CDD:28974"
misc_feature order(117223..117231,117256..117267,117271..117276,
117283..117288,117292..117297,117313..117321,
117343..117351)
/locus_tag="RBRH_00794"
/note="putative DNA binding site [nucleotide binding];
other site"
/db_xref="CDD:28974"
gene 117978..118169
/locus_tag="RBRH_00795"
/db_xref="GeneID:9985582"
CDS 117978..118169
/locus_tag="RBRH_00795"
/EC_number="1.-.-.-"
/codon_start=1
/transl_table=11
/product="NADH-dependent flavin oxidoreductase"
/protein_id="YP_004027788.1"
/db_xref="GI:312794866"
/db_xref="GeneID:9985582"
/translation="MSRAGMLGIGEASVVEPAGRITPADLGLWDMRSTARWCDPRCIR
CVPALNSAMVYVYDAQFHS"
misc_feature 117987..>118067
/locus_tag="RBRH_00795"
/note="TIM barrel proteins share a structurally conserved
phosphate binding motif and in general share an eight
beta/alpha closed barrel structure. Specific for this
family is the conserved phosphate binding site at the
edges of strands 7 and 8. The phosphate...; Region:
TIM_phosphate_binding; cl09108"
/db_xref="CDD:213114"
gene 118150..118746
/locus_tag="RBRH_00796"
/db_xref="GeneID:9985583"
CDS 118150..118746
/locus_tag="RBRH_00796"
/codon_start=1
/transl_table=11
/product="zinc finger protein"
/protein_id="YP_004027789.1"
/db_xref="GI:312794867"
/db_xref="GeneID:9985583"
/translation="MRSFTVDSSGRDDSMSSRRIAVRRSGVHGKGVFATSKIAPGEQL
IEYKGERISWKEALRRHPHDPEQPNHTFYFALDDGTVIDGKVDGNSARWINHSCAPNC
EAQEIDGRVFIHAIRTIEPDEELFYDYGLVIDARLTKKLKKEYECRCGAKKCRGTMLA
SSSPVPGSGKKPRAASGDAKPRNGSRQRGDSASAKKKR"
misc_feature <118207..118623
/locus_tag="RBRH_00796"
/note="Proteins containing SET domain [General function
prediction only]; Region: COG2940"
/db_xref="CDD:32763"
misc_feature 118234..118539
/locus_tag="RBRH_00796"
/note="SET domain; Region: SET; pfam00856"
/db_xref="CDD:201474"
gene complement(118801..120327)
/locus_tag="RBRH_00797"
/db_xref="GeneID:9985584"
CDS complement(118801..120327)
/locus_tag="RBRH_00797"
/EC_number="2.7.3.-"
/codon_start=1
/transl_table=11
/product="two component system histidine kinase"
/protein_id="YP_004027790.1"
/db_xref="GI:312794868"
/db_xref="GeneID:9985584"
/translation="MTPAKSLRRSLLRKLAAPLSMLALMSGLIAYWLAWEYTERVVDR
SMVDLASAIGRQVELSGPDAPRTVPPLTHAMFSDPAQQLIYRVSRGNQLIAGDPALPL
HGTRVRHMRYAYVFDARYGDSLVRVAQVRVEQVNGDAIIIEVGQHVTHGYQIAAEFLV
AIMMPLLILLFAGWAIVWRVVNQQLNPLTDLADSLNRQTHRSLEPVDETHVPLEIRPL
TRALNALLDRLKAALDAQRKFIADAAHQLRTPLTAVKLHAEQASVAKDNTTLRLALHE
LRTSADRAVRLSNQLLSLARAEPEEQNARFVDIDLTELAFDTGAEWVPRALAAQLDLG
FHSDPPPDGKPLIVRGNPVLLREVIGNLIDNALKYVPPTRPSGGGTVTVTVTVGRVDA
LCHDAGLADDRASAAVEPTDLRGWAEVVVEDNGPGVPKALHADLFKRFFRGDAQTGSE
GPTGAGLGLAIVRDIIALHGGSVHYEDAPDGGARFIVRLPLPSSHKPGHDNALLEPAH
"
misc_feature complement(119851..120243)
/locus_tag="RBRH_00797"
/note="Two-component sensor kinase N-terminal; Region:
2CSK_N; pfam08521"
/db_xref="CDD:203968"
misc_feature complement(118837..119964)
/locus_tag="RBRH_00797"
/note="Signal transduction histidine kinase [Signal
transduction mechanisms]; Region: BaeS; COG0642"
/db_xref="CDD:30987"
misc_feature complement(119440..119622)
/locus_tag="RBRH_00797"
/note="Histidine Kinase A (dimerization/phosphoacceptor)
domain; Histidine Kinase A dimers are formed through
parallel association of 2 domains creating 4-helix
bundles; usually these domains contain a conserved His
residue and are activated via...; Region: HisKA; cd00082"
/db_xref="CDD:119399"
misc_feature complement(order(119455..119457,119467..119469,
119476..119478,119488..119490,119497..119499,
119509..119511,119557..119559,119566..119568,
119578..119580,119587..119589,119599..119601,
119611..119613))
/locus_tag="RBRH_00797"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119399"
misc_feature complement(119593..119595)
/locus_tag="RBRH_00797"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:119399"
misc_feature complement(118861..119265)
/locus_tag="RBRH_00797"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:28956"
misc_feature complement(order(118873..118875,118879..118884,
118897..118899,118903..118905,118951..118962,
119044..119049,119053..119055,119059..119061,
119065..119067,119224..119226,119233..119235,
119245..119247))
/locus_tag="RBRH_00797"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28956"
misc_feature complement(119233..119235)
/locus_tag="RBRH_00797"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:28956"
misc_feature complement(order(118954..118956,118960..118962,
119047..119049,119053..119055))
/locus_tag="RBRH_00797"
/note="G-X-G motif; other site"
/db_xref="CDD:28956"
gene complement(120324..121010)
/locus_tag="RBRH_00798"
/db_xref="GeneID:9985585"
CDS complement(120324..121010)
/locus_tag="RBRH_00798"
/codon_start=1
/transl_table=11
/product="transcriptional regulator"
/protein_id="YP_004027791.1"
/db_xref="GI:312794869"
/db_xref="GeneID:9985585"
/translation="MRLLLIEDDRPIARGIQSSLEQAGFTVDMVHDGIFAEQALTQNR
HELVILDLGLPGIDGMTLLARFRQANRHTPVIVLTARDELNDRVQGLNSGADDYMIKP
FEPAELEARIRAIMRRSGSHGDMPRPEVSLGGLRLSGVDRRIFNDDKPLELSPREFAV
LEMLLLRHGRVVSKAQLQDHLTHFGGDLGDTAIEVYVHRVRKKLEHCRVEIVTVRGFG
YLLQEIRQNS"
misc_feature complement(120345..121010)
/locus_tag="RBRH_00798"
/note="transcriptional regulatory protein TctD;
Provisional; Region: PRK15479"
/db_xref="CDD:185376"
misc_feature complement(120663..121001)
/locus_tag="RBRH_00798"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature complement(order(120705..120710,120717..120719,
120774..120776,120834..120836,120858..120860,
120987..120992))
/locus_tag="RBRH_00798"
/note="active site"
/db_xref="CDD:29071"
misc_feature complement(120858..120860)
/locus_tag="RBRH_00798"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature complement(order(120834..120842,120846..120851))
/locus_tag="RBRH_00798"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature complement(120702..120710)
/locus_tag="RBRH_00798"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
misc_feature complement(120348..120623)
/locus_tag="RBRH_00798"
/note="Effector domain of response regulator. Bacteria and
certain eukaryotes like protozoa and higher plants use
two-component signal transduction systems to detect and
respond to changes in the environment. The system consists
of a sensor histidine kinase and...; Region: trans_reg_C;
cd00383"
/db_xref="CDD:29475"
misc_feature complement(order(120357..120359,120372..120374,
120399..120404,120426..120428,120435..120437,
120489..120494,120549..120551))
/locus_tag="RBRH_00798"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:29475"
gene 121029..121307
/locus_tag="RBRH_00799"
/db_xref="GeneID:9985586"
CDS 121029..121307
/locus_tag="RBRH_00799"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027792.1"
/db_xref="GI:312794870"
/db_xref="GeneID:9985586"
/translation="MGWTACRGDNAPRFAQGPVMSNISIHELEAAINYWRARSPSTGD
ELRLGNEASALSKPYALLIVTRQHAIPEDALEPAARDAWQAYIRLNGR"
misc_feature 121086..121286
/locus_tag="RBRH_00799"
/note="Protein of unknown function (DUF3717); Region:
DUF3717; pfam12512"
/db_xref="CDD:152946"
gene complement(121339..121641)
/locus_tag="RBRH_00800"
/db_xref="GeneID:9985587"
CDS complement(121339..121641)
/locus_tag="RBRH_00800"
/EC_number="4.2.1.96"
/codon_start=1
/transl_table=11
/product="Pterin-4-alpha-carbinolamine dehydratase"
/protein_id="YP_004027793.1"
/db_xref="GI:312794871"
/db_xref="GeneID:9985587"
/translation="MIQKLSTDERAKLGSTLPAWQPVSGRDAIRRQLQFADFNAAFGF
MTRVAIKAQEMNHHPEWSNVYNRVEITLATHEAGGITPRDIELARFIDSIADASCC"
misc_feature complement(121360..121584)
/locus_tag="RBRH_00800"
/note="PCD_DCoH: The bifunctional protein
pterin-4alpha-carbinolamine dehydratase (PCD), also known
as DCoH (dimerization cofactor of hepatocyte nuclear
factor-1), is both a transcription activator and a
metabolic enzyme. DCoH stimulates gene expression by...;
Region: PCD_DCoH_subfamily_b; cd00914"
/db_xref="CDD:48350"
misc_feature complement(order(121417..121419,121459..121461,
121468..121470,121516..121518,121528..121530))
/locus_tag="RBRH_00800"
/note="aromatic arch; other site"
/db_xref="CDD:48350"
misc_feature complement(order(121447..121470,121483..121485,
121528..121530))
/locus_tag="RBRH_00800"
/note="DCoH dimer interaction site [polypeptide binding];
other site"
/db_xref="CDD:48350"
misc_feature complement(order(121480..121485,121492..121494,
121501..121506,121522..121527))
/locus_tag="RBRH_00800"
/note="DCoH /HNF-1 dimer interaction site [polypeptide
binding]; other site"
/db_xref="CDD:48350"
misc_feature complement(order(121480..121482,121492..121494,
121501..121506,121525..121527))
/locus_tag="RBRH_00800"
/note="DCoH tetramer interaction site [polypeptide
binding]; other site"
/db_xref="CDD:48350"
misc_feature complement(order(121414..121419,121423..121425,
121468..121476))
/locus_tag="RBRH_00800"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:48350"
gene complement(121638..122165)
/locus_tag="RBRH_00801"
/db_xref="GeneID:9985588"
CDS complement(121638..122165)
/locus_tag="RBRH_00801"
/EC_number="4.6.1.1"
/codon_start=1
/transl_table=11
/product="adenylate cyclase"
/protein_id="YP_004027794.1"
/db_xref="GI:312794872"
/db_xref="GeneID:9985588"
/translation="MARNIEIKARVPNIDALRERAAALASGDAPLVYRQQDHFYDVPR
GRLKLRQFEDGTPAELIFYQRDDRDGPKVSFYQRCPVANPHATHALLAAALGTRGIVT
KERTVYLAGRTRIHLDRVDGLGDFVELEVVLAQDDEEAIGEAEALDIFSKLGVSDTDL
VPHAYVDLLQEQVTT"
misc_feature complement(121683..122156)
/locus_tag="RBRH_00801"
/note="Adenylyl cyclase (AC) class IV-like, a subgroup of
the CYTH-like superfamily; Region: CYTH-like_AC_IV-like;
cd07890"
/db_xref="CDD:143628"
misc_feature complement(order(121776..121778,121782..121784,
121812..121814,121851..121853,121857..121859,
121938..121940,121974..121976,122010..122012,
122016..122018,122022..122024,122046..122054,
122058..122060,122142..122144,122148..122150,
122154..122156))
/locus_tag="RBRH_00801"
/note="putative active site [active]"
/db_xref="CDD:143628"
misc_feature complement(order(121776..121778,121782..121784,
122148..122150,122154..122156))
/locus_tag="RBRH_00801"
/note="putative metal binding residues [ion binding];
other site"
/db_xref="CDD:143628"
misc_feature complement(order(122142..122144,122148..122150,
122154..122156))
/locus_tag="RBRH_00801"
/note="signature motif; other site"
/db_xref="CDD:143628"
misc_feature complement(order(121782..121784,121851..121853,
121938..121940,121974..121976,122010..122012,
122022..122024,122049..122051,122142..122144,
122148..122150))
/locus_tag="RBRH_00801"
/note="putative triphosphate binding site [ion binding];
other site"
/db_xref="CDD:143628"
misc_feature complement(order(121884..121889,121893..121901,
121905..121910,121917..121919,121923..121937,
121941..121943,121968..121973,121977..121979,
121983..121985,122025..122027,122031..122033))
/locus_tag="RBRH_00801"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:143628"
gene 122143..122322
/locus_tag="RBRH_00802"
/db_xref="GeneID:9985589"
CDS 122143..122322
/locus_tag="RBRH_00802"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027795.1"
/db_xref="GI:312794873"
/db_xref="GeneID:9985589"
/translation="MISMLRAIDLSTTMGAVNGRTAPAARLLMQLSVSSCHYAVVVQP
AAAQQQSPARGDVGE"
gene 122359..123303
/locus_tag="RBRH_00803"
/db_xref="GeneID:9985590"
CDS 122359..123303
/locus_tag="RBRH_00803"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027796.1"
/db_xref="GI:312794874"
/db_xref="GeneID:9985590"
/translation="MLVNRLSADLGIRLGASRRTRHYMFSSEDKISEESLAIAMRIHD
LLNRHGVGKRQHAAEIQRILGLSYSQAHRKMKGANPWTIAQVKAVAQAYGESAAMLLD
GLDSSEPVSAIAAKMQEAVFYIGDATYRCLADIGERAHDVSGLEFVALKDGNRWKVFP
VEAAPGGDYFVVEQILIRARSAPEVSPVIAILDDDPLLTAEMCSYFHSHGYVAQPYNT
EATFRAALRENVFDGFIVDWLLESGTAEQTIQSIRQSRYGDAPILLLTGKLVTGEANE
DDVARVIQQYDVKPFEKPARLNWVAVELARRLKAGAPG"
misc_feature 122461..122892
/locus_tag="RBRH_00803"
/note="BetR domain; Region: BetR; pfam08667"
/db_xref="CDD:117240"
misc_feature 122923..123249
/locus_tag="RBRH_00803"
/note="Response regulator receiver domain; Region:
Response_reg; pfam00072"
/db_xref="CDD:200976"
misc_feature 122929..123234
/locus_tag="RBRH_00803"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature order(122935..122940,123067..123069,123091..123093,
123154..123156,123214..123216,123223..123228)
/locus_tag="RBRH_00803"
/note="active site"
/db_xref="CDD:29071"
misc_feature 123067..123069
/locus_tag="RBRH_00803"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature order(123076..123081,123085..123093)
/locus_tag="RBRH_00803"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature 123223..123231
/locus_tag="RBRH_00803"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
gene complement(123281..123703)
/locus_tag="RBRH_00805"
/db_xref="GeneID:9985591"
CDS complement(123281..123703)
/locus_tag="RBRH_00805"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027797.1"
/db_xref="GI:312794875"
/db_xref="GeneID:9985591"
/translation="MSDKRQLTAQIKSAVGYLSNSAFFFGRFAPLVSSFSTCKFGALN
GLKIKQSPAQQQLAFTLVVHDARNGCFPLHCHDAPHRCFNRNARGAAQATISRTTPRH
FRATVLPLAVLHGKRFSRHGLQRSGSFMMGGSSQAPLP"
gene 123771..123965
/locus_tag="RBRH_00808"
/db_xref="GeneID:9985592"
CDS 123771..123965
/locus_tag="RBRH_00808"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027798.1"
/db_xref="GI:312794876"
/db_xref="GeneID:9985592"
/translation="MPDARSVLAQRAYGNHEMEESVISIRFKGTRRFAVLSASSTDNA
MHARHAHSPAEYRGNDAWFF"
gene 124017..124211
/locus_tag="RBRH_00809"
/db_xref="GeneID:9985593"
CDS 124017..124211
/locus_tag="RBRH_00809"
/codon_start=1
/transl_table=11
/product="branched-chain amino acid transport system
permease livM / branched-chain amino acid transport
ATP-binding protein livG"
/protein_id="YP_004027799.1"
/db_xref="GI:312794877"
/db_xref="GeneID:9985593"
/translation="MWPVARILDYLLHYIGLYVIVAIGLVLLTGVGGMTSFSQAAFVG
LGAYATAFLATRYGSCHGSA"
misc_feature 124116..>124190
/locus_tag="RBRH_00809"
/note="Transmembrane subunit (TM) of Periplasmic Binding
Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which are involved in the uptake of
branched-chain amino acids (AAs), as well as TMs of
transporters involved in the uptake of...; Region:
TM_PBP1_branched-chain-AA_like; cl00454"
/db_xref="CDD:200658"
gene 124193..124309
/locus_tag="RBRH_00810"
/db_xref="GeneID:9985594"
CDS 124193..124309
/locus_tag="RBRH_00810"
/codon_start=1
/transl_table=11
/product="branched-chain amino acid transport system
permease livM / branched-chain amino acid transport
ATP-binding protein livG"
/protein_id="YP_004027800.1"
/db_xref="GI:312794878"
/db_xref="GeneID:9985594"
/translation="MPWFGLVVGVVIAALAALAIGAIMMRLSGHCLPLDTIA"
misc_feature 124515..125245
/note="potential frameshift: common BLAST hit:
gi|91785747|ref|YP_560953.1| branched chain amino acid ABC
transporter ATPase/inner membrane"
gene 124515..124637
/locus_tag="RBRH_04065"
/db_xref="GeneID:9985595"
CDS 124515..124637
/locus_tag="RBRH_04065"
/codon_start=1
/transl_table=11
/product="branched-chain amino acid transport system
permease livM / branched-chain amino acid transport
ATP-binding protein livG"
/protein_id="YP_004027801.1"
/db_xref="GI:312794879"
/db_xref="GeneID:9985595"
/translation="MCCGVTMAEAMGVNMTWMKIVIFVYAAVLASISGFLYVHL"
misc_feature <124536..>124634
/locus_tag="RBRH_04065"
/note="Transmembrane subunit (TM) of Periplasmic Binding
Protein (PBP)-dependent ATP-Binding Cassette (ABC)
transporters which are involved in the uptake of
branched-chain amino acids (AAs), as well as TMs of
transporters involved in the uptake of...; Region:
TM_PBP1_branched-chain-AA_like; cl00454"
/db_xref="CDD:200658"
misc_feature 124536..124586
/locus_tag="RBRH_04065"
/note="TM-ABC transporter signature motif; other site"
/db_xref="CDD:119320"
gene complement(124645..124911)
/locus_tag="RBRH_00812"
/db_xref="GeneID:9988039"
CDS complement(124645..124911)
/locus_tag="RBRH_00812"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027802.1"
/db_xref="GI:312794880"
/db_xref="GeneID:9988039"
/translation="MTDNSSSLAVGFTCYGSGGWADCGTPNTMASKLPFSPSNLDDSD
CSPSRSTSQDRRAKHSAPYMRNAANNGHEPALDPMVQTKGRWID"
gene 124901..125245
/locus_tag="RBRH_00813"
/db_xref="GeneID:9985596"
CDS 124901..125245
/locus_tag="RBRH_00813"
/codon_start=1
/transl_table=11
/product="branched-chain amino acid transport system
permease livM / branched-chain amino acid transport
ATP-binding protein livG"
/protein_id="YP_004027803.1"
/db_xref="GI:312794881"
/db_xref="GeneID:9985596"
/translation="MSVNHARQEFGRLVAVNGVSFGWKAGEVFGLIGPNGTGKSTTFH
LVTGVLQPTRGEITLSWAVHRSARFAQYRQARHRSYISVNEMYDHDSARECRERCAFA
WNDRRISQHHLH"
misc_feature 124904..>125104
/locus_tag="RBRH_00813"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:213113"
misc_feature 124997..125020
/locus_tag="RBRH_00813"
/note="Walker A/P-loop; other site"
/db_xref="CDD:72971"
misc_feature order(125006..125011,125015..125023)
/locus_tag="RBRH_00813"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:72971"
gene 125258..125440
/locus_tag="RBRH_00814"
/db_xref="GeneID:9985597"
CDS 125258..125440
/locus_tag="RBRH_00814"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027804.1"
/db_xref="GI:312794882"
/db_xref="GeneID:9985597"
/translation="MRHLHMIKTYLSLTKKAAAQRLLAAGLAARVGAAMILRLFHVKH
DAFFVHKSCGSIHQCS"
gene 125511..127520
/locus_tag="RBRH_00815"
/db_xref="GeneID:9985598"
CDS 125511..127520
/locus_tag="RBRH_00815"
/codon_start=1
/transl_table=11
/product="glucose inhibited division protein A"
/protein_id="YP_004027805.1"
/db_xref="GI:312794883"
/db_xref="GeneID:9985598"
/translation="MLYPTEFDVIVVGGGHAGTEAALASARMGAKTLLLTHNIETLGQ
MSCNPSIGGIGKGHLVKEVDALGGAMAVATDEAGIQFRILNSSKGPAVRATRAQADRI
LYKAAIRRRLENQSNLWLFQQSVDDLIIEGDRVAGAVTQVGIRFRSRAVVLTAGTFLD
GKIHVGLNNYTGGRAGDPAAVSLSARLRELKLPQGRLKTGTPPRIDGRSIDFLKLEEQ
PGDLDPIPVFSFLGCADQHPRQVSCWITHTNARTHEIIRSGLDRSPMYTGVIEGVGPR
YCPSIEDKIHRFATKESHQIFLEPEGLTTNEFYPNGVSTSLPFDVQLNLIRSMKGLEH
AHILRPGYAIEYDYFDPRALKASLETKAIAGLFFAGQINGTTGYEEAAAQGLLAGINA
GRFVQQRDAWVPRRDQAYLGVLVDDLVTRGVSEPYRMFTSRAEYRLSLREDNADMRLT
EIGRELGVVDDVRWEAFSRKREAVSRETARLKSIWVNPKTLPAEDAVALLGKPIDHEY
SLADLLRRPGVSYEGLMALQASRYAPPDVLVDDPGLFEQVKYQIEIGIKYQGYIERQA
GEIERNEAHENTRLPADLDYVQVRGLSFEVCQKLNHHRPETIGQASRISGVTPAAISL
LMVHLKKGLGRSTLKKSAVAADTPLTEPEAVDATTGASSTRATAQ"
misc_feature 125517..127406
/locus_tag="RBRH_00815"
/note="tRNA uridine 5-carboxymethylaminomethyl
modification enzyme GidA; Validated; Region: PRK05192"
/db_xref="CDD:179960"
misc_feature 125535..>125894
/locus_tag="RBRH_00815"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:213117"
misc_feature <126453..126755
/locus_tag="RBRH_00815"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:213117"
misc_feature 127176..127391
/locus_tag="RBRH_00815"
/note="GidA associated domain 3; Region: GIDA_assoc_3;
pfam13932"
/db_xref="CDD:206103"
gene 127517..128227
/locus_tag="RBRH_00816"
/db_xref="GeneID:9985599"
CDS 127517..128227
/locus_tag="RBRH_00816"
/EC_number="2.1.-.-"
/codon_start=1
/transl_table=11
/product="methyltransferase gidB"
/protein_id="YP_004027806.1"
/db_xref="GI:312794884"
/db_xref="GeneID:9985599"
/translation="MIRTGSGATRRAPENFAAQRPELELLLRGGATELGVPLSEEQIG
GLLDYVGLLTKWNAVYNLTAIREPRQMVIQHLLDSLAIVPYIASRSPASLLDVGSGGG
LPGIVIALAMPSCDVVTNDIVHKKTAFQQQAKGCLRLSNLSIVTGRVQALRAEIDVPV
RFDAIVSRAFAELADFVTLARHLVRPGGALWAMKGVRPDEEIARLPTGATVRQVIRLT
VPSLNAERHLVEIAVEPE"
misc_feature 127796..128095
/locus_tag="RBRH_00816"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cd02440"
/db_xref="CDD:100107"
misc_feature order(127805..127825,127877..127882,127955..127960,
127967..127969,128018..128020)
/locus_tag="RBRH_00816"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
gene 128224..129066
/locus_tag="RBRH_00817"
/db_xref="GeneID:9985600"
CDS 128224..129066
/locus_tag="RBRH_00817"
/codon_start=1
/transl_table=11
/product="chromosome partitioning protein parA"
/protein_id="YP_004027807.1"
/db_xref="GI:312794885"
/db_xref="GeneID:9985600"
/translation="MSDADNTLAESRVVNATSPAGQQAVAKIFCIANQKGGVGKTTTS
VNLAASLVMQGQRVLLIDLDPQGNATMGSGVDKANCANTVYEVLVDGVAIADACTRAP
TSGYDVLPANRELAGAEVELVSAPQRERRLKDALAKVADAYDFVLIDCPPALSLLTLN
GLCAAHGVIIPMQCEYFALEGLSDLVNTIKQIHANLNRELTVIGLLRVMFDPRITLQQ
QVSDQLKQHFGDKVFNAVIPRNVRLAEAPSYGMPGIVFDGASRGAQAYLQFGAEMIER
VRAL"
misc_feature 128299..129063
/locus_tag="RBRH_00817"
/note="ATPases involved in chromosome partitioning [Cell
division and chromosome partitioning]; Region: Soj;
COG1192"
/db_xref="CDD:31385"
misc_feature 128305..>128421
/locus_tag="RBRH_00817"
/note="ParA and ParB of Caulobacter crescentus belong to a
conserved family of bacterial proteins implicated in
chromosome segregation. ParB binds to DNA sequences
adjacent to the origin of replication and localizes to
opposite cell poles shortly following the...; Region:
ParA; cd02042"
/db_xref="CDD:73302"
misc_feature 128326..128346
/locus_tag="RBRH_00817"
/note="P-loop; other site"
/db_xref="CDD:73302"
misc_feature 128344..128346
/locus_tag="RBRH_00817"
/note="Magnesium ion binding site [ion binding]; other
site"
/db_xref="CDD:73302"
misc_feature <128650..128841
/locus_tag="RBRH_00817"
/note="ParA and ParB of Caulobacter crescentus belong to a
conserved family of bacterial proteins implicated in
chromosome segregation. ParB binds to DNA sequences
adjacent to the origin of replication and localizes to
opposite cell poles shortly following the...; Region:
ParA; cd02042"
/db_xref="CDD:73302"
misc_feature 128668..128670
/locus_tag="RBRH_00817"
/note="Magnesium ion binding site [ion binding]; other
site"
/db_xref="CDD:73302"
gene 129130..130023
/locus_tag="RBRH_00818"
/db_xref="GeneID:9985601"
CDS 129130..130023
/locus_tag="RBRH_00818"
/codon_start=1
/transl_table=11
/product="chromosome partitioning protein parB"
/protein_id="YP_004027808.1"
/db_xref="GI:312794886"
/db_xref="GeneID:9985601"
/translation="MMMNAAVKKKGLGRGLDALLGGSADITEAVKQQGSPSVLPLDRL
QPGKYQPRTRMDEGALQELAASIRAQGLMQPILVRPVAAQRYEIIAGERRFRAARLAG
LDEVPVLVKQVADEAAAAMALIENIQREDLNPLEEAQGIQRLLDEFKFTHEQAAESLG
RSRSAVSNLLRLLNLAQPVQTMLLAGDLDMGHARALLAVDGATQITLANQVVNRRLSV
RETEKLVAATAKQIPPSAKRASQERSRDIMRLEEEVSDLVAATVRIKMGRRGRGQLTI
DFGSLDALDGILARLRRDATA"
misc_feature 129235..129732
/locus_tag="RBRH_00818"
/note="ParB-like partition proteins; Region: parB_part;
TIGR00180"
/db_xref="CDD:161748"
misc_feature 129244..129510
/locus_tag="RBRH_00818"
/note="ParB-like nuclease domain; Region: ParBc;
pfam02195"
/db_xref="CDD:145381"
gene 130020..131237
/locus_tag="RBRH_00819"
/db_xref="GeneID:9985602"
CDS 130020..131237
/locus_tag="RBRH_00819"
/codon_start=1
/transl_table=11
/product="cation transporters"
/protein_id="YP_004027809.1"
/db_xref="GI:312794887"
/db_xref="GeneID:9985602"
/translation="MMSRHEAPSRRVQCKQGAGSAQSVAMPRGVGDTYRRLRRVIVVV
CHGLAKEPILATLVTAFALLQCVHPQPWRTMPARVDWQTVMTLAGLLMLTKAVEYSGF
LTWASHRLVRRIRSERGLAVLLVLLAAGLSTLLTNDVALFVIVPLMLSLHALVPLPVG
RLVVLVALAVNAGSILTPFGSPQNLFLWQRSGESFVAFIVALAPLCAALMAVLVALTL
VTCRARPLDLSRDPLPGTLDRPLFCAAAASFAGFVALADAHHAGIGLALVALGLGAWR
RDIVMRIDWLLLLIFVLMFIVLRSAALLPIVHRLLADADLTRPGPAYLAGALVSQLIS
NVPAAIILAEYSQDWRALAFGVSVGGFGIAIGSLANLIAMRLVGSHGSWWYFHVISLP
FYVLALLLGRMLL"
misc_feature 130167..>130616
/locus_tag="RBRH_00819"
/note="Anion permease ArsB/NhaD. These permeases have
been shown to translocate sodium, arsenate, antimonite,
sulfate and organic anions across biological membranes in
all three kingdoms of life. A typical anion permease
contains 8-13 transmembrane helices...; Region:
ArsB_NhaD_permease; cl15356"
/db_xref="CDD:213135"
misc_feature <130845..131234
/locus_tag="RBRH_00819"
/note="Anion permease ArsB/NhaD. These permeases have
been shown to translocate sodium, arsenate, antimonite,
sulfate and organic anions across biological membranes in
all three kingdoms of life. A typical anion permease
contains 8-13 transmembrane helices...; Region:
ArsB_NhaD_permease; cl15356"
/db_xref="CDD:213135"
gene 131456..131998
/locus_tag="RBRH_00820"
/db_xref="GeneID:9985603"
CDS 131456..131998
/locus_tag="RBRH_00820"
/codon_start=1
/transl_table=11
/product="ATP synthase I"
/protein_id="YP_004027810.1"
/db_xref="GI:312794888"
/db_xref="GeneID:9985603"
/translation="MMTTGVPENERDPAVASGSAPSPCKPSNRLATAHNDRDDELEDN
DIVPLTRGEAERMFGPQVSRPSRVTPTKVVTAQMVVSLAAALAWWLFSKSPGHAALSA
VLGGAICWVPSALFAARLRRKGSTESILAWVLGEAVKIASTVAMFVVTAMLYRNVHWL
ALLVTYLIALKTYWLALAWR"
misc_feature 131639..131989
/locus_tag="RBRH_00820"
/note="ATP synthase I chain; Region: ATP_synt_I; cl09170"
/db_xref="CDD:208995"
gene 132050..132898
/locus_tag="RBRH_00821"
/db_xref="GeneID:9985604"
CDS 132050..132898
/locus_tag="RBRH_00821"
/EC_number="3.6.3.14"
/codon_start=1
/transl_table=11
/product="ATP synthase subunit A"
/protein_id="YP_004027811.1"
/db_xref="GI:312794889"
/db_xref="GeneID:9985604"
/translation="MAASAGTHLDPSEYIQHHLQNFATKHQTSIVDFSIINLDTLFWS
IAMGLVTIVILAIAARAATPGVPGRFQCAIEMLVEMVEDQSKAIVHGNRRFIAPLALT
VFIWVALMNSLDFIPVDLPGRIIEWIGLSNTISHHRLVPTADLNGTLGIALGVLVLML
YYNVKIKGPGGFVRELVSAPFGSNPFLWLPNLLLNLIEFLAKTVSLGMRLFGNMYAGE
LLFLLIALLGSIWSFGADTTVLGFVGHVLAGSIWAIFHILIVLLQAFIFMMLTLVYLG
QAHDAH"
misc_feature 132092..132895
/locus_tag="RBRH_00821"
/note="F0F1 ATP synthase subunit A; Validated; Region:
PRK05815"
/db_xref="CDD:180273"
gene 132953..133228
/locus_tag="RBRH_00822"
/db_xref="GeneID:9985605"
CDS 132953..133228
/locus_tag="RBRH_00822"
/EC_number="3.6.3.14"
/codon_start=1
/transl_table=11
/product="ATP synthase subunit C"
/protein_id="YP_004027812.1"
/db_xref="GI:312794890"
/db_xref="GeneID:9985605"
/translation="MIMQAFIANIQGLTAIGIGIIIGLGAIGACLGIALMGGKYIEAC
ARQPELMNPLQTKMFLLAGLIDAAFLIGVGVAMLFAFANPLLSKLAG"
misc_feature <133067..133204
/locus_tag="RBRH_00822"
/note="F0F1 ATP synthase subunit C; Validated; Region:
PRK06876"
/db_xref="CDD:180739"
gene 133350..133820
/locus_tag="RBRH_00823"
/db_xref="GeneID:9985606"
CDS 133350..133820
/locus_tag="RBRH_00823"
/EC_number="3.6.3.14"
/codon_start=1
/transl_table=11
/product="ATP synthase subunit B"
/protein_id="YP_004027813.1"
/db_xref="GI:312794891"
/db_xref="GeneID:9985606"
/translation="MNLNATLIAQMVVFLILAWFTMKFVWPPLISALDERAKKIADGL
AAADKGKTELEAAHKRIDQELANARNEGQQRVAEAEKRAQLMADEIKRNAQAEAARII
AQAKAEAEQQVVKVRDALRGDVAALAVKGAEQILKREIDQNAHVELLNQLKAEL"
misc_feature 133350..133817
/locus_tag="RBRH_00823"
/note="F0F1 ATP synthase subunit B; Validated; Region:
PRK05759"
/db_xref="CDD:180240"
misc_feature 133356..133817
/locus_tag="RBRH_00823"
/note="F0F1-type ATP synthase, subunit b [Energy
production and conversion]; Region: AtpF; COG0711"
/db_xref="CDD:31055"
gene 133823..134371
/locus_tag="RBRH_00824"
/db_xref="GeneID:9985607"
CDS 133823..134371
/locus_tag="RBRH_00824"
/EC_number="3.6.3.14"
/codon_start=1
/transl_table=11
/product="ATP synthase subunit delta"
/protein_id="YP_004027814.1"
/db_xref="GI:312794892"
/db_xref="GeneID:9985607"
/translation="MAELATIARPYAEALFGVASTDRAADLAAWSALVQELAQVARLP
EVLSIVSSPKVGRQQVVDLLLAALKSPVKDSPAAKNFVQMLVENHRVPLLPEIAAQFD
ALKNAQEGAADVTIESAFALDGQSLADLVAVLERKFQRKLKPTVKLEPALIGGVRVTV
GDEVLDTSVRARLAAMQTALTA"
misc_feature 133823..134368
/locus_tag="RBRH_00824"
/note="F0F1 ATP synthase subunit delta; Validated; Region:
PRK05758"
/db_xref="CDD:180239"
misc_feature 133841..134362
/locus_tag="RBRH_00824"
/note="ATP synthase delta (OSCP) subunit; Region: OSCP;
pfam00213"
/db_xref="CDD:189453"
gene 134970..135980
/locus_tag="RBRH_00825"
/db_xref="GeneID:9985608"
CDS 134970..135980
/locus_tag="RBRH_00825"
/EC_number="3.6.3.14"
/codon_start=1
/transl_table=11
/product="ATP synthase subunit alpha"
/protein_id="YP_004027815.1"
/db_xref="GI:312794893"
/db_xref="GeneID:9985608"
/translation="MAVDAIINQKGKNLTCIYVAIGQKASSIMNVVRKLEEHGAMDYT
IVVAASASDSAAMQFIAPYAGCTMGEYFRDRGQDALIIYDDLTKQAWAYRQISLLLRR
PPGREAYPGDVFYLHSRLLERAARVSEEYVEKFTNGEVKGKSGSLTALPVIETQAGDV
TAFVPTNVISITDGQIFLETDLFNAGIRPAINAGISVSRVGGAAQTKVIKKLSGGIRT
DLAQYRELAAFAQFASDLDEATRKQLERGRRVTELLKQPQYQPLQVWELAVALFAANN
GYLDDLEVKHVLPFEKGLGEFLKTSHAALIKRIEDNKDLAKDDEAALHAAIKDFKKSG
AY"
misc_feature <134970..135572
/locus_tag="RBRH_00825"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:213113"
misc_feature order(135021..135023,135027..135032,135219..135224)
/locus_tag="RBRH_00825"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:29986"
misc_feature 135207..135221
/locus_tag="RBRH_00825"
/note="Walker B motif; other site"
/db_xref="CDD:29986"
misc_feature 135597..>135821
/locus_tag="RBRH_00825"
/note="ATP synthase alpha/beta chain, C terminal domain;
Region: ATP-synt_ab_C; pfam00306"
/db_xref="CDD:144044"
gene 136060..136944
/locus_tag="RBRH_00826"
/db_xref="GeneID:9985609"
CDS 136060..136944
/locus_tag="RBRH_00826"
/EC_number="3.6.3.14"
/codon_start=1
/transl_table=11
/product="ATP synthase subunit gamma"
/protein_id="YP_004027816.1"
/db_xref="GI:312794894"
/db_xref="GeneID:9985609"
/translation="MAGMKEIRGKIKSVQNTRKITKAMEMVAASKMRRAQERMRTARP
YADKVRDIAAHMSGANPEYRHPFMVKNVGAKTAGVIVVTTDKGLCGGMNTNVLRALVQ
KFKDLDAQGIKTESTAIGGKGLTFLNRFGGKVVSQVTHLGDTPHLEKLIGAIKVQLDR
YSQGELSAVYLAYTRFVNTMKQEPVIEQLLPLTDERFEKRADEAPTPKSSWDYIYEPD
AQAVVDDLLVRYVEALVYQAVAENMASEQSARMVAMKAASDNAKTVINDLQLVYNKSR
QAAITKELSEIVGGAAAV"
misc_feature 136060..136941
/locus_tag="RBRH_00826"
/note="F0F1 ATP synthase subunit gamma; Validated; Region:
PRK05621"
/db_xref="CDD:180168"
misc_feature 136060..136941
/locus_tag="RBRH_00826"
/note="F0F1 ATP synthase subunit gamma; Provisional;
Region: PRK13422"
/db_xref="CDD:184046"
gene 137016..138407
/locus_tag="RBRH_00827"
/db_xref="GeneID:9985610"
CDS 137016..138407
/locus_tag="RBRH_00827"
/EC_number="3.6.3.14"
/codon_start=1
/transl_table=11
/product="ATP synthase subunit beta"
/protein_id="YP_004027817.1"
/db_xref="GI:312794895"
/db_xref="GeneID:9985610"
/translation="MSTTALVEGKIVQCIGAVIDVEFPREQMPKIYDALILEGSDLTL
EVQQQLGDGVVRTICLGSSEGLRRGLTVKNTGNPITVPVGTPTLGRIMDVLGRPIDEA
GPISHENTRSIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKT
VNMMELINNIAKEHGGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPG
NRLRVALTGLTMAEHFRDEGRDVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLA
EEMGKLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGI
YPAVDPLDSTSRQIDPNVIGEEHYTITRSVQQTLQRFKELRDIIAILGMDELSPEDKL
TVARARKIQRFLSQPFHVAEVFTGAPGKYVPLKETIRGFKMIVDGECDHLPEQAFYMV
GTIDEAFEKAKKI"
misc_feature 137040..138404
/locus_tag="RBRH_00827"
/note="F0F1 ATP synthase subunit beta; Validated; Region:
PRK09280"
/db_xref="CDD:181752"
misc_feature 137046..137243
/locus_tag="RBRH_00827"
/note="ATP synthase alpha/beta family, beta-barrel domain;
Region: ATP-synt_ab_N; pfam02874"
/db_xref="CDD:145823"
misc_feature 137247..138065
/locus_tag="RBRH_00827"
/note="F1 ATP synthase beta subunit, nucleotide-binding
domain. The F-ATPase is found in bacterial plasma
membranes, mitochondrial inner membranes and in
chloroplast thylakoid membranes. It has also been found in
the archaea Methanosarcina barkeri. It uses a...; Region:
F1-ATPase_beta; cd01133"
/db_xref="CDD:29999"
misc_feature order(137316..137318,137367..137369,137373..137378,
137382..137384,137388..137390,137571..137579,
137586..137588,137652..137660,137673..137675,
137763..137765,137772..137774,137784..137786,
137802..137810,137814..137819,137832..137834,
137844..137846,137865..137867,137916..137918,
137925..137930,137940..137942,137961..137963,
137967..137975,138006..138011,138036..138041,
138045..138047,138051..138053)
/locus_tag="RBRH_00827"
/note="alpha subunit interaction interface [polypeptide
binding]; other site"
/db_xref="CDD:29999"
misc_feature 137475..137495
/locus_tag="RBRH_00827"
/note="Walker A motif; other site"
/db_xref="CDD:29999"
misc_feature order(137481..137483,137490..137498,137568..137573,
137580..137582,137751..137753,137763..137765,
138015..138020)
/locus_tag="RBRH_00827"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:29999"
misc_feature 137739..137753
/locus_tag="RBRH_00827"
/note="Walker B motif; other site"
/db_xref="CDD:29999"
misc_feature order(138009..138011,138015..138017,138033..138038)
/locus_tag="RBRH_00827"
/note="inhibitor binding site; inhibition site"
/db_xref="CDD:29999"
misc_feature 138099..138404
/locus_tag="RBRH_00827"
/note="ATP synthase alpha/beta chain, C terminal domain;
Region: ATP-synt_ab_C; pfam00306"
/db_xref="CDD:144044"
gene 138444..138938
/locus_tag="RBRH_00828"
/db_xref="GeneID:9985611"
CDS 138444..138938
/locus_tag="RBRH_00828"
/EC_number="3.6.3.14"
/codon_start=1
/transl_table=11
/product="ATP synthase subunit epsilon"
/protein_id="YP_004027818.1"
/db_xref="GI:312794896"
/db_xref="GeneID:9985611"
/translation="MRAPGESELAVPTPAIHAQPGVDMATIKVDVVSAEESIFSGHAR
FVALPGEAGELGILPGHTPLITRIRPGSVRIEDENGDEQFVFVAGGILEVQPGAVTVL
ADTAIRGAELDEAKAEQARKRAEEALQNTDSNLEYATAQAELAYATAQLAAIAQLRRR
RGQH"
misc_feature 138513..>138782
/locus_tag="RBRH_00828"
/note="F0F1 ATP synthase subunit epsilon; Validated;
Region: atpC; PRK00571"
/db_xref="CDD:179070"
misc_feature 138522..138761
/locus_tag="RBRH_00828"
/note="ATP synthase, Delta/Epsilon chain, beta-sandwich
domain; Region: ATP-synt_DE_N; pfam02823"
/db_xref="CDD:202416"
gene 139134..140882
/locus_tag="RBRH_00829"
/db_xref="GeneID:9985612"
CDS 139134..140882
/locus_tag="RBRH_00829"
/EC_number="6.2.1.3"
/codon_start=1
/transl_table=11
/product="long-chain-fatty-acid--CoA ligase"
/protein_id="YP_004027819.1"
/db_xref="GI:312794897"
/db_xref="GeneID:9985612"
/translation="MKPETTMTTALALPPAQIEPKNGLSYVRGRTDVLLSGATVGEFL
GQTARCFADHLAVVFREQGVRWTWREFSQEVDALAAGFASLDIGQGDRVGIWSPNRVE
WLVTQFATARIGAILVNINPAYRLAELDYALNKVGCRAIVAAEQFKTSRYLEMLQTLA
PELAQHAPGELQAARLPELRHVIRMGAGRTPGMLCYDDLVQQGRSRLDMAHLAAISGT
LDAHDPINIQFTSGTTGKPKGATLTHHNIVNNARFIAMSMRLTEQDRLCIPVPLYHCF
GMVLAVLACVSTGAAMVFPGEGFDPAATLAAVSDERCTALHGVPTMFIAELDHPDFEH
YDLSRLRTGIMAGSPCPIETMKRVVARMHLGEITIAYGMTETSPVSFQSAASDPLEKR
TTTVGRIQPHLEAKIIDALGNIVPVGQTGELCTKGYSVMQGYWGDDEKTRESIIDGWM
HTGDLATLDAQGYCNIVGRLKDMVIRGGENIYPREIEELLFRHPKIQSVQVFGVPDAK
YGEELCAWIVLRPGETATAEDIRDFCHGQIAHYKIPKYVRFVSDLPMTVTGKVQKFVM
RAKMIDELKLSLDKTA"
misc_feature 139200..140873
/locus_tag="RBRH_00829"
/note="AMP-binding domain protein; Validated; Region:
PRK08315"
/db_xref="CDD:181380"
misc_feature 139332..140636
/locus_tag="RBRH_00829"
/note="AMP-binding enzyme; Region: AMP-binding; pfam00501"
/db_xref="CDD:201270"
misc_feature 140754..>140852
/locus_tag="RBRH_00829"
/note="Domain of unknown function (DUF4009); Region:
DUF4009; pfam13193"
/db_xref="CDD:205374"
gene 141493..142647
/locus_tag="RBRH_00831"
/db_xref="GeneID:9985613"
CDS 141493..142647
/locus_tag="RBRH_00831"
/EC_number="4.1.1.37"
/codon_start=1
/transl_table=11
/product="uroporphyrinogen decarboxylase"
/protein_id="YP_004027820.1"
/db_xref="GI:312794898"
/db_xref="GeneID:9985613"
/translation="MLESPMRGARPLKWCFSWAERTVPHNLANDTFLRALRREPTEYT
PIWLMRQAGRYLPEYNATRARAGSFLGLAKQPDYATEVTLQPLDRYVLDAAILFSDIL
TIPDAMGLGLEFTPGEGPRFAHPVRTEADVARLAVPGIDATLRYVTDAVAQIRRALVG
ADGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMLYARPDLMHRILEVNARAVA
DYLNAQIDAGAQAVMIFDTWGGVLAERIYQSFSLQYMSQVVAALKREHDGEPVPVIAF
TKGGGQWLEAIAASGVDAVGLDWTVDLARARARVGGRVALQGNLDPNVLFAPPEVIRA
QARQVLDAYGNHPGHIFNLGHGISQFTPVQAVTELVDEVHQYSRAMRAVE"
misc_feature 141589..142617
/locus_tag="RBRH_00831"
/note="Uroporphyrinogen decarboxylase (URO-D) is a dimeric
cytosolic enzyme that decarboxylates the four acetate side
chains of uroporphyrinogen III (uro-III) to create
coproporphyrinogen III, without requiring any prosthetic
groups or cofactors. This reaction...; Region: URO-D;
cd00717"
/db_xref="CDD:48141"
misc_feature 141589..142602
/locus_tag="RBRH_00831"
/note="methyltransferase, MtaA/CmuA family; Region:
mtaA_cmuA; TIGR01463"
/db_xref="CDD:130530"
misc_feature order(141637..141654,141667..141669,141679..141681,
141697..141699,141778..141798,141832..141834,
141847..141849,142006..142008,142036..142038,
142054..142056,142195..142197,142201..142206,
142318..142320,142555..142557)
/locus_tag="RBRH_00831"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:48141"
misc_feature order(141640..141642,141652..141654,141790..141792,
142036..142038,142201..142203,142555..142557)
/locus_tag="RBRH_00831"
/note="active site"
/db_xref="CDD:48141"
gene complement(142823..142915)
/locus_tag="RBRH_00832"
/db_xref="GeneID:9985614"
CDS complement(142823..142915)
/locus_tag="RBRH_00832"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027821.1"
/db_xref="GI:312794899"
/db_xref="GeneID:9985614"
/translation="MERPSDAHFAEIGLCVGSIQIILQIKDLEK"
gene 143035..145395
/locus_tag="RBRH_00833"
/db_xref="GeneID:9985615"
CDS 143035..145395
/locus_tag="RBRH_00833"
/codon_start=1
/transl_table=11
/product="Primosomal protein N'"
/protein_id="YP_004027822.1"
/db_xref="GI:312794900"
/db_xref="GeneID:9985615"
/translation="MSPLSVTLRRAGSDRRGCADTRPMQPTLFRYVRVALDHPLSALY
DYRWTLPSQPLPGMLVQVPFGRRQIVGLVIEVADATDVPEDRLRDVQSACIDCPPLDA
NWLQLIAFAADYYQRGRGEVALPALPQALRDAARWPRLFAREPVYRLTTAGRDRLPDA
LPARATALRRLAQALLRADTLGADDARAIHPKAVATLEQWQEHGWVHVQWRGAVEALE
MSDTTQPPGRPGHDVSSRLDPCAVPELNAEQRAAVEAIDAARGFAPFVLHGVTGSGKT
EVYLHSLAALFARRPDAQALVMVPEINLTPQFEAVFRARFSHWPATALVTLHSGLADG
ERARNWLAAHAAGARIVLGTRMAVLASLPRLALIIVDEEHEPAYKQQEGLRYSARDLA
VWRAKQLSVSVVLGSATPSLETWWHACQRRYTTLALSRRAVADATLPRVRLIDMEAEK
QTGRHRADGLSMPLVKALQERLARGEQSLVFLNRRGYAPVLACDACGWVAGCSRCSAY
VVLHRPEQRMRCHHCGGESRIPRACPACGNVDLAPFGRGTQRIEEALGAAVPGARVLR
IDADSTRRKGSAQALLSGVHAGDVDILVGTQMIAKGHDFQRVTLVGVLNADAALFSHD
FRAGERLFAQLMQVSGRAGRGGTHGEVLIQTGHARHALYAALARHDYVGFAETTLAER
RDAHLPPFVFQALLRAEARGLDDALRFLNEAAAILDAVPGAECVTRYDPVPLNIVKVM
HVHRAQLLLESASRAALQRTLHAWVPRLRELKGALRWNVEVDPLDI"
misc_feature 143122..145392
/locus_tag="RBRH_00833"
/note="primosome assembly protein PriA; Validated; Region:
PRK05580"
/db_xref="CDD:180144"
misc_feature 143827..144264
/locus_tag="RBRH_00833"
/note="DEAD-like helicases superfamily. A diverse family
of proteins involved in ATP-dependent RNA or DNA
unwinding. This domain contains the ATP-binding region;
Region: DEXDc; cd00046"
/db_xref="CDD:28927"
misc_feature 143848..143862
/locus_tag="RBRH_00833"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28927"
misc_feature 144145..144156
/locus_tag="RBRH_00833"
/note="putative Mg++ binding site [ion binding]; other
site"
/db_xref="CDD:28927"
misc_feature <144793..144993
/locus_tag="RBRH_00833"
/note="Helicase superfamily c-terminal domain; associated
with DEXDc-, DEAD-, and DEAH-box proteins, yeast
initiation factor 4A, Ski2p, and Hepatitis C virus NS3
helicases; this domain is found in a wide variety of
helicases and helicase related proteins; may...; Region:
HELICc; cd00079"
/db_xref="CDD:28960"
misc_feature order(144844..144846,144943..144945,144955..144957,
144964..144966)
/locus_tag="RBRH_00833"
/note="ATP-binding site [chemical binding]; other site"
/db_xref="CDD:28960"
misc_feature 145627..147976
/note="potential frameshift: common BLAST hit:
gi|162457404|ref|YP_001619771.1| nitrate reductase"
gene 145627..146766
/locus_tag="RBRH_00834"
/db_xref="GeneID:9985616"
CDS 145627..146766
/locus_tag="RBRH_00834"
/EC_number="1.7.7.2"
/codon_start=1
/transl_table=11
/product="Assimilatory ferredoxin--nitrate reductase"
/protein_id="YP_004027823.1"
/db_xref="GI:312794901"
/db_xref="GeneID:9985616"
/translation="MLFQKKCLGRASMEPRQDQNISCLGEPDRWVHSACILCSNGCGL
EIAVKDGRIVGVRGKLDHPVNFGHLGPKGKHAWVANESRRRGRQPMVRRAKGAPLEPV
SWDEALAFFMQKFQDAWEQGHGNLACYNSGQLTLEEFYTLGKLWRGGLQSSNIDGNTR
LCTATAATGLMANFGADGPAASYVDIDEAELLCLYGHNVAEAQTVLWERMLAAKQRNQ
GRIIVVDPRKSPTVRQGADLHLQIRIGTNVALMNGLIHLLIRNGAVDLDFVRKHTVGF
ELMQSVVAEYSPQRVADICGIEITALETAAQWIGSTERHGFLPCCRGVLSGCGGDRIL
FLGQQCASAARCHRQARRGPLVNGGTALRHVEPGSWGGRLLPRLS"
misc_feature 145723..>146568
/locus_tag="RBRH_00834"
/note="Molybdopterin-Binding (MopB) domain of the MopB
superfamily of proteins, a large, diverse, heterogeneous
superfamily of enzymes that, in general, bind
molybdopterin as a cofactor. The MopB domain is found in a
wide variety of molybdenum- and...; Region:
Molybdopterin-Binding; cl09928"
/db_xref="CDD:209095"
misc_feature order(145840..145842,146101..146103,146107..146115,
146209..146214,146218..146220,146227..146232,
146296..146304,146365..146367)
/locus_tag="RBRH_00834"
/note="molybdopterin cofactor binding site; other site"
/db_xref="CDD:73198"
gene 146690..147976
/locus_tag="RBRH_00835"
/db_xref="GeneID:9985617"
CDS 146690..147976
/locus_tag="RBRH_00835"
/EC_number="1.7.7.2"
/codon_start=1
/transl_table=11
/product="Assimilatory ferredoxin--nitrate reductase"
/protein_id="YP_004027824.1"
/db_xref="GI:312794902"
/db_xref="GeneID:9985617"
/translation="MLMAGQPSAMSNREAGADGSYPGYRNPHNLTHMRELAELWNIDP
VTFHPEVPKDIVTMLETAERGEIEFLWVIGTNPIVSLPDQNRTRRILEQLFVVVQDPF
VDADTIALADIYFPVAMWGEKTGCVTNADRTVNLLCKAVEPPGQARTDLEIFVEVAHR
LGFKDRDGKPLIGYREPSEAFDEWRRVSKGRPCDYSGMTYELLLKKGGVRWPCNEQHP
EGSERLYEDLHFWTGIDDCESYGADFLTGSKHTRAQYKAIDPNGRAFLRPAQWRRPPN
PPSESYPFVLSTGRVVYHFHTRTKTGRSEALHRRVPNAYVEIHPDDAQRLGICLGDWV
EVSSMRGRWEGPAMVVDTVRPGELFIPFHFGKGHQAANQHTTYARDPVSQQPQFKSSP
VQLKWLSFAEPEPWLVERRNDLQNRNMKPYAARDIR"
misc_feature <146696..147385
/locus_tag="RBRH_00835"
/note="Molybdopterin-Binding (MopB) domain of the MopB
superfamily of proteins, a large, diverse, heterogeneous
superfamily of enzymes that, in general, bind
molybdopterin as a cofactor. The MopB domain is found in a
wide variety of molybdenum- and...; Region:
Molybdopterin-Binding; cl09928"
/db_xref="CDD:209095"
misc_feature 147527..147874
/locus_tag="RBRH_00835"
/note="This CD includes formate dehydrogenases (Fdh) H and
N; nitrate reductases, Nap and Nas; and other related
proteins. Formate dehydrogenase H is a component of the
anaerobic formate hydrogen lyase complex and catalyzes
the reversible oxidation of formate...; Region:
MopB_CT_Fdh-Nap-like; cd00508"
/db_xref="CDD:30306"
misc_feature order(147551..147565,147569..147580,147773..147775,
147803..147805,147851..147856)
/locus_tag="RBRH_00835"
/note="molybdopterin cofactor binding site; other site"
/db_xref="CDD:30306"
gene 148757..152680
/locus_tag="RBRH_00839"
/db_xref="GeneID:9985618"
CDS 148757..152680
/locus_tag="RBRH_00839"
/EC_number="1.5.99.8"
/EC_number="1.5.1.12"
/codon_start=1
/transl_table=11
/product="Proline dehydrogenase /
Delta-1-pyrroline-5-carboxylate dehydrogenase"
/protein_id="YP_004027825.1"
/db_xref="GI:312794903"
/db_xref="GeneID:9985618"
/translation="MASTTLGVKVDDPLRTRLKEAALRLERTPHWLIKQAIFAYLEKI
EHGTLPPELSLSHEVADAGESGIEPNDDASHPFLELAQNVQPQSVLRAAITAAYRRPE
PECVPFLIGQARLAPPLASDVQVLATRLVEALRAKRTGGGVEGLIHEFSLSSQEGVAL
MCLAEALLRIPDRATRDALIRDKISKGDWKSHVGHAPSLFVNAATWGLMITGKLVETN
SEAGLSRALTRMIGKGGEPLIRKGVDMAMRLMGEQFVTGETISEALANSRKYEARGFR
YSYDMLGEAATTEKDAQHYYALYEQAIHAIGKAAGGRGIYDGPGISIKLSALHARYSR
AQYERVMSELLPRVRALARLARRYDIGLNIDAEEADRLEISLDLLEALCSDPELAGWN
GIGFVVQAYQKRCPFVIDYLIDLARRSRHRLMVRLVKGAYWDSEIKRAQVDGLEGYPV
YTRKVYTDVSYLACAKKLLGVPDAVYPQFATHNAHTLSAIYHLAGQNYYPGQYEFQCL
HGMGEPLYEEVTGRGKLNRPCRVYAPVGTHETLLAYLVRRLLENGANTSFVNRIADES
VPVAELVADPADEASRIVPLGAPHPKIPLPRALYGSERANSMGLDLSNEHRLASLSSA
LLASTNVMWHAAPTLQPGEVVSGTPRLVRNPADQRDVVGTVVDATAEHVQAALANALA
TAPIWQATPVQARADCLTRAADLLEAQIHTLMGLVVREAGKSLPNAIAEIREAIDFLR
YYASQIRGEFSNDTHRPLGLIVCISPWNFPLAIFMGQVAAALAAGNTVLAKPAEQTPL
IAAQAVRLLHEAGVPTGAVQLLPGDGETVGAALVADPRTRGVMFTGSTEVARLINRTL
SERLDPDGKPIPLIAETGGQNAMIVDSSALPEQVVADVLQSAFDSAGQRCSALRVLCL
QDDVAQHTLQMLTGAMRELSIGNPDRLSTDIGPVIDAEAKRGIEAHIATMRDKGRKVF
QLPLPDSCQHGMFVPPTLIEIDSIDELEREVFGPVLHVVRYRRHALESLLEAIRATGY
GLTLGVHTRIDETIGHVIERVHVGNIYVNRNVIGAVVGVQPFGGEGLSGTGPKAGGPL
YLYRLLAKRPNGIPASLARSLSEETPADGGPAAALTAFRDWLLGERDVQLAARCDGYL
SQVLAGATATLPGPTGERNTYALSARGTVLCIASTASGARAQLAAVLATGNRALFIGA
SGEQLVGALPVALRSYAAVSRDGDLGVEYDAVLFEGDSDALQSLVRQIAARGGPIVSV
QSVVTGAFDEDAFGDDYALERLLTERSVSVNTAAAGGNASLMTIG"
misc_feature 148757..152677
/locus_tag="RBRH_00839"
/note="trifunctional transcriptional regulator/proline
dehydrogenase/pyrroline-5-carboxylate dehydrogenase;
Reviewed; Region: putA; PRK11809"
/db_xref="CDD:183321"
misc_feature 148760..>148885
/locus_tag="RBRH_00839"
/note="Ribbon-helix-helix protein, copG family; Region:
RHH_1; cl15783"
/db_xref="CDD:210183"
misc_feature 149423..150454
/locus_tag="RBRH_00839"
/note="Proline dehydrogenase; Region: Pro_dh; pfam01619"
/db_xref="CDD:201891"
misc_feature 150416..152125
/locus_tag="RBRH_00839"
/note="Delta(1)-pyrroline-5-carboxylate dehydrogenase,
PutA; Region: ALDH_PutA-P5CDH; cd07125"
/db_xref="CDD:143443"
misc_feature order(150956..150958,151058..151063,151370..151372,
151466..151477,151925..151927,151970..151972)
/locus_tag="RBRH_00839"
/note="Glutamate binding site [chemical binding]; other
site"
/db_xref="CDD:143443"
misc_feature order(151046..151051,151127..151129,151133..151138,
151226..151228,151280..151282,151289..151291,
151298..151300)
/locus_tag="RBRH_00839"
/note="NAD binding site [chemical binding]; other site"
/db_xref="CDD:143443"
misc_feature order(151058..151060,151370..151372,151463..151465,
151472..151474)
/locus_tag="RBRH_00839"
/note="catalytic residues [active]"
/db_xref="CDD:143443"
misc_feature <152222..>152536
/locus_tag="RBRH_00839"
/note="NAD(P)+-dependent aldehyde dehydrogenase
superfamily; Region: ALDH-SF; cl11961"
/db_xref="CDD:213126"
misc_feature order(152288..152293,152306..152308,152360..152362,
152366..152371,152468..152479,152486..152488,
152495..152500)
/locus_tag="RBRH_00839"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:143395"
gene 152770..153921
/locus_tag="RBRH_00840"
/db_xref="GeneID:9985619"
CDS 152770..153921
/locus_tag="RBRH_00840"
/codon_start=1
/transl_table=11
/product="Leucine-, isoleucine-, valine-, threonine-, and
alanine-binding protein"
/protein_id="YP_004027826.1"
/db_xref="GI:312794904"
/db_xref="GeneID:9985619"
/translation="MEHTMKKLTGATLFAALSVAGSVAHAQQTEQVKVGFAAPMTGAQ
AHYGKDMQNGIVLAIEDFNATKPVLGGKPVQIVLDTGDDQADPRTGTTVAQKLVDDGI
KGMLGHFNSGTTIPASRIYANAGIAQIAMATAPEYTQQGYKTTFRMMTSDTQQGSVAG
TFAARTLKLKKVVIIDDRTAYGQGLADQFEKAAKASGAKILEREYTNDKAVDFKAILT
KVKSLTPDLVYYGGADAQAGPMVKQMKALGIKTPLMAGEMVKTDTFLKLAGDAANGTI
ASLAGLPLEEMPGGKDYVAKYKKRFGEEVQTYSPYAYDGAMALFEAMKKANSTDPAKY
LPALARTDMSGVTAKHVAYDAKGDLKNGGITLYKVVNGQWTPLQSVGGK"
misc_feature 152785..153852
/locus_tag="RBRH_00840"
/note="leucine ABC transporter subunit substrate-binding
protein LivK; Provisional; Region: PRK15404"
/db_xref="CDD:185302"
misc_feature 152866..153876
/locus_tag="RBRH_00840"
/note="Type I periplasmic ligand-binding domain of ABC
(Atpase Binding Cassette)-type active transport systems
that are involved in the transport of all three branched
chain aliphatic amino acids (leucine, isoleucine and
valine); Region: PBP1_ABC_LIVBP_like; cd06342"
/db_xref="CDD:107337"
misc_feature order(152887..152889,152914..152916,152926..152928,
152935..152937,153493..153495,153556..153558,
153565..153567,153574..153579,153670..153672)
/locus_tag="RBRH_00840"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:107337"
misc_feature order(153094..153102,153163..153165,153310..153312,
153466..153468,153538..153540)
/locus_tag="RBRH_00840"
/note="ligand binding site [chemical binding]; other site"
/db_xref="CDD:107337"
gene complement(154048..155496)
/locus_tag="RBRH_00841"
/db_xref="GeneID:9985620"
CDS complement(154048..155496)
/locus_tag="RBRH_00841"
/EC_number="4.3.1.17"
/codon_start=1
/transl_table=11
/product="L-serine dehydratase"
/protein_id="YP_004027827.1"
/db_xref="GI:312794905"
/db_xref="GeneID:9985620"
/translation="MQPPAPLNQPRAWRDTSGVAMAVSVFDLFKIGIGPSSSHTVGPM
RAALLFAQGLQRDLLLPATASVKVELYGSLGATGKGHGTDRGVMLGLLGEAPDTVQAE
AIADKLEHVASSRTLALLGTHPVPFLPKEHIVFYRQALPEHPNGLKLRALDAAGSVLR
ESTYLSVGGGFVVTAGASNTRVLNAHEQLPHPFSTGSELLQRCTQTGRTIAQLMFENE
RVWRSDDAIRADLLRIWGVMQSCVARGCGIGNPAADGNLPGPFQVRRRAPQLYRDLSG
KPEVALRDPLSMVDWINLYAIAVNEENAAGARVVTAPTNGAAGIIPAVLHYYTRFVPD
ANDTGVIDFLLTAGAIGILYKLNASISGAEVGCQGEVGVACSMAAGALAAVMGATPAQ
VENAAEIGMEHNLGLTCDPVGGMVQIPCIERNAMASVKAVNAARMALRGDGSHYVSLD
SVIKTMRETGADMKTKYKETSRGGLAVNIVEC"
misc_feature complement(154060..155430)
/locus_tag="RBRH_00841"
/note="L-serine dehydratase, iron-sulfur-dependent, single
chain form; Region: sda_mono; TIGR00720"
/db_xref="CDD:188076"
misc_feature complement(154972..155427)
/locus_tag="RBRH_00841"
/note="Serine dehydratase beta chain; Region: SDH_beta;
pfam03315"
/db_xref="CDD:202592"
misc_feature complement(154063..154884)
/locus_tag="RBRH_00841"
/note="Serine dehydratase alpha chain; Region: SDH_alpha;
pfam03313"
/db_xref="CDD:202591"
gene complement(155521..156666)
/locus_tag="RBRH_00842"
/db_xref="GeneID:9985621"
CDS complement(155521..156666)
/locus_tag="RBRH_00842"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027828.1"
/db_xref="GI:312794906"
/db_xref="GeneID:9985621"
/translation="MKPRIVDTFRSDPTCRRAAARTTIVLAAMAGLLGPLCAVPVRAA
MNFCAAPALQNSERTHADPGVRALVQQTLVGLSDAPRAVAQLHTEGTLPHQGLYDQTV
NAQKDFQLMRNAALAWRATGDERFLRYVARLLDAWVTTYQPSFNPIDETKLDGLILAY
DLTASALPVKTRNATIAFLRKLARGYVERIDSQPRPLRHTFANNWQSHRVKLIAMAAF
TLDDRKLIDAAQQLFVEQVGTNIAPDGTTRDFGERDALHYVTYDLQPLVMAALAARRH
NRNWLRERSASGATLEHALDWLVPYALGRASHEEFVHSRVSFDETRRAAGLRSFSGTW
DPRSAAELFHLAARLNGRYQPVALHLAPVPPPWLAACLPLPARSSER"
misc_feature complement(155743..156531)
/locus_tag="RBRH_00842"
/note="Alginate lyase; Region: Alginate_lyase; pfam05426"
/db_xref="CDD:203248"
gene 156691..156870
/locus_tag="RBRH_00843"
/db_xref="GeneID:9985622"
CDS 156691..156870
/locus_tag="RBRH_00843"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027829.1"
/db_xref="GI:312794907"
/db_xref="GeneID:9985622"
/translation="MLAFLRGWLTQTIRFRALIRADFRSRRRRDPQRTQAFLSRLGLS
AWGLLGANVTVPRYA"
gene complement(156861..159863)
/locus_tag="RBRH_00844"
/db_xref="GeneID:9985623"
CDS complement(156861..159863)
/locus_tag="RBRH_00844"
/EC_number="1.4.4.2"
/codon_start=1
/transl_table=11
/product="glycine dehydrogenase"
/protein_id="YP_004027830.1"
/db_xref="GI:312794908"
/db_xref="GeneID:9985623"
/translation="MKPEHPDHLMNRAPRPTLAELERHDAFAERHIGPSADDQRQMLA
VLGFDHRDALIDAVMPPSIRRRDSLSLGEFTAPRSEAEALARLRELARQNEVFRSYIG
QGYYGTHTPAVILRNVLENPAWYTAYTPYQPEISQGRLEALLNFQQMVIDLTGLDTAN
ASLLDEGTAAAEAMTLLQRVGKPRSNVFYVADDVLPQTIEVVRTRAQPVGIDVRVGPA
AAAAQAGAFGVLLQYPGVNGDVRDYRDLAAAIHEAGAHVVAAADLLALTLLTPPGEWG
ADVAVGTSQRFGVPLAFGGPHAAYLAVRDTFKRQMPGRLVGVSVDAQGKPALRLALQT
REQHIRREKATSNVCTAQALLAIMASMYAVYHGPRGLRQIAERVHRIAAILAAGVRQL
GYTLANDTFFDTLTIESGTRTEALHEAARARRINLRRIDSARVGVSVDETTTRLDLAD
LLALFAETAGTAPALAGVQPDTMPAQAGAPTLDIDALDASVEDALPAALLRRSAYLTH
PVFNRHHCETEMLRYLRQLADKDLALDRAMIPLGSCTMKLNATSEMLPVTWPEFAQIH
PFAPASQTIGYRKMIEQLEQMLVTCTGYAAVSLQPNAGSQGEYAGLLIIHAYHASRGE
GHRNVCLIPASAHGTNPASAQMAGMQVVVVACDAQGNVDVEDLKTKAARHADKLAAIM
ITYPSTHGVFEQNVREICEIVHAHGGQVYVDGANMNAMVGLTAPGQFGGDVSHLNLHK
TFCIPHGGGGPGVGPVAVAAHLARFLPNQRSVGYVREGAATPAGNPDGIGAVSSAPYG
SAAILPISWMYIAMMGARGLKSATETAILNANYIAKRLAPHYPVLYSGAGGLVAHECI
LDLRPIKDVSGITVDDVAKRLIDYGFHAPTMSFPVPGTLMIEPTESESKAELDRFIDA
MIAIRDEIRAIEQGHADRDDNPLKHAPHTAAVIGADTWPHAYGREQAAYPVPSRAASK
YWPPIGRADNAYGDRNLFCSCVPVCDYA"
misc_feature complement(156864..159812)
/locus_tag="RBRH_00844"
/note="glycine dehydrogenase; Provisional; Region:
PRK05367"
/db_xref="CDD:180041"
misc_feature complement(158616..159587)
/locus_tag="RBRH_00844"
/note="Glycine cleavage system P-protein, alpha- and
beta-subunits. This family consists of Glycine cleavage
system P-proteins EC:1.4.4.2 from bacterial, mammalian and
plant sources. The P protein is part of the glycine
decarboxylase multienzyme complex EC:2.1; Region: GDC-P;
cd00613"
/db_xref="CDD:99737"
misc_feature complement(order(158664..158666,158691..158693,
158715..158717,158721..158723,158736..158738,
158745..158747,158769..158774,158784..158786,
158802..158810,158976..158996,159009..159011,
159144..159146,159219..159221,159252..159257,
159261..159266,159273..159284,159324..159326,
159354..159359,159441..159443,159447..159455,
159462..159464,159468..159476,159480..159488,
159510..159512,159519..159521,159528..159542,
159546..159548,159552..159554,159582..159587))
/locus_tag="RBRH_00844"
/note="tetramer interface [polypeptide binding]; other
site"
/db_xref="CDD:99737"
misc_feature complement(order(159006..159011,159015..159017,
159084..159086,159273..159275,159279..159281,
159348..159350,159357..159362,159555..159557))
/locus_tag="RBRH_00844"
/note="pyridoxal 5'-phosphate binding site [chemical
binding]; other site"
/db_xref="CDD:99737"
misc_feature complement(159006..159008)
/locus_tag="RBRH_00844"
/note="catalytic residue [active]"
/db_xref="CDD:99737"
misc_feature complement(157119..158315)
/locus_tag="RBRH_00844"
/note="Glycine cleavage system P-protein, alpha- and
beta-subunits. This family consists of Glycine cleavage
system P-proteins EC:1.4.4.2 from bacterial, mammalian and
plant sources. The P protein is part of the glycine
decarboxylase multienzyme complex EC:2.1; Region: GDC-P;
cd00613"
/db_xref="CDD:99737"
misc_feature complement(order(157146..157151,157158..157163,
157239..157241,157314..157316,157350..157352,
157374..157376,157380..157382,157395..157397,
157404..157406,157428..157433,157443..157445,
157461..157469,157611..157631,157647..157649,
157788..157790,157926..157931,157935..157940,
157947..157958,158016..158018,158046..158051,
158127..158129,158133..158141,158148..158150,
158154..158162,158166..158174,158190..158192,
158199..158201,158208..158222,158226..158228,
158232..158234,158271..158285,158292..158300,
158310..158315))
/locus_tag="RBRH_00844"
/note="tetramer interface [polypeptide binding]; other
site"
/db_xref="CDD:99737"
misc_feature complement(order(157644..157649,157653..157655,
157725..157727,157947..157949,157953..157955,
158040..158042,158049..158054,158235..158237))
/locus_tag="RBRH_00844"
/note="pyridoxal 5'-phosphate binding site [chemical
binding]; other site"
/db_xref="CDD:99737"
misc_feature complement(157644..157646)
/locus_tag="RBRH_00844"
/note="catalytic residue [active]"
/db_xref="CDD:99737"
gene complement(159928..160308)
/locus_tag="RBRH_00845"
/db_xref="GeneID:9985624"
CDS complement(159928..160308)
/locus_tag="RBRH_00845"
/codon_start=1
/transl_table=11
/product="glycine cleavage system H protein"
/protein_id="YP_004027831.1"
/db_xref="GI:312794909"
/db_xref="GeneID:9985624"
/translation="MTIPAELKYTESHEWIRKEDDGTLTIGITDHAQEALGDVVFLEL
PEAGKQVEAGDAIAVIESVKAASDIYAPVAGEIVESNDALISAPDQVNGAPYESWLFR
IKPADTAAMDSLLDAAAYGQAIGA"
misc_feature complement(160000..160284)
/locus_tag="RBRH_00845"
/note="Glycine cleavage H-protein. Glycine cleavage
H-proteins are part of the glycine cleavage system (GCS)
found in bacteria, archea and the mitochondria of
eukaryotes. GCS is a multienzyme complex consisting of 4
different components (P-, H-, T- and...; Region: GCS_H;
cd06848"
/db_xref="CDD:133457"
misc_feature complement(160117..160119)
/locus_tag="RBRH_00845"
/note="lipoyl attachment site [posttranslational
modification]; other site"
/db_xref="CDD:133457"
gene complement(160404..161645)
/locus_tag="RBRH_00846"
/db_xref="GeneID:9985625"
CDS complement(160404..161645)
/locus_tag="RBRH_00846"
/EC_number="2.1.2.10"
/codon_start=1
/transl_table=11
/product="aminomethyltransferase"
/protein_id="YP_004027832.1"
/db_xref="GI:312794910"
/db_xref="GeneID:9985625"
/translation="MRGRQAARRNLSGTEDRGVMHASTAARMLVRLFVFALLRAFMTQ
LKTTPLNAVHRALHARMVDFGGWNMPVNYGSQIDEHRAVRSDAGMFDVSHMCVVDIAG
AGARAFLRMALANNIDKLQTPGRALYSCMLNASGGVVDDLIVYYFADDAFRVVVNAGT
ADKDIGWLGQLNAEGSFGVTLTPRRDLAILAVQGPNARVKVGQAVPAVQQPGEALKPF
NAARVDGTPFGALMVARTGYTGEDGFELIVEAAHVQALWQALAAQGVKPCGLGARDTL
RLEAGMNLYGQDMDENVSPLDAGLAWTVDLSGERDFVGSAALRAQGQRASFVGLVLDK
DPQGKPAGILRAHQKVLTAHGDGEVTSGTFSPSLQQSIALARVPTAVSAGDTVQVMIR
DKALPARVVKLPFVRHGKPLI"
misc_feature complement(160413..161513)
/locus_tag="RBRH_00846"
/note="glycine cleavage system aminomethyltransferase T;
Reviewed; Region: gcvT; PRK00389"
/db_xref="CDD:178995"
misc_feature complement(160437..160718)
/locus_tag="RBRH_00846"
/note="Glycine cleavage T-protein C-terminal barrel
domain; Region: GCV_T_C; pfam08669"
/db_xref="CDD:204020"
gene complement(162169..164313)
/locus_tag="RBRH_00848"
/db_xref="GeneID:9985626"
CDS complement(162169..164313)
/locus_tag="RBRH_00848"
/EC_number="3.6.1.-"
/codon_start=1
/transl_table=11
/product="ATP-dependent DNA helicase rep"
/protein_id="YP_004027833.1"
/db_xref="GI:312794911"
/db_xref="GeneID:9985626"
/translation="MYGLNPAQSAAVTYLDGPCLVLAGAGSGKTRVITQKIAHLIEAK
GFEPRHIAAVTFTNKAAAEMRERVGKLLEGKTLTTPGKEGRKVPVNQLTVCTFHSLGV
QILRQEAAHVGLKPQFSIMDADDCFAMIQEQIGTTDKGLIRRIQSIISLWKNGMVTPE
QASVLAQNEDEMQAAIVFRHYAATLHAYQAVDFDDLIRLPTELFRDNEPVRDKWQNRL
RYLLVDEYQDTNTCQYELLKLLAGPRAAFTAVGDDDQAIYGWRGATLENLAQLQVDFP
RLKVIKLEQNYRSTVRILNAANSVIAQNPKLFEKKLWSEHGMGDTITVTPCNDEEHEA
ESVVFRLSAHKFERRTQFRDYAILYRGNFQARIFEQVLRRERIPYVLSGGQSFFDRAE
IKDICAYLRLIANHDDDPAFIRAITTPRRGVGNTTLEALGSFAGQAKVSLFEAVYMGG
IEARLSPRQVEPLRVFCDFIQRIAARAGTDPATTLLDDLMEAIHYEAYLYDAFDERQA
QTKWTNVLEFLEWLKKKGTKPERDATLGGSGTPRGEDADDDDDDEQHAYGYENADGLA
DTGKNLLGLIQTVALMSMLDGKDEDPDAVRLSTVHASKGLEYPHVFLVGVEEGILPHR
GGADDEPIDDARIEEERRLMYVAITRAQRSLHLNYCKKRKRARETLVCEPSRFIAEMR
LDDAPPPTPDEAPMTPKDRLASLKALLQKQPG"
misc_feature complement(162271..164307)
/locus_tag="RBRH_00848"
/note="ATP-dependent DNA helicase Rep; Region: rep;
TIGR01074"
/db_xref="CDD:130146"
misc_feature complement(164101..164283)
/locus_tag="RBRH_00848"
/note="Part of AAA domain; Region: AAA_19; pfam13245"
/db_xref="CDD:205425"
misc_feature complement(162343..>162531)
/locus_tag="RBRH_00848"
/note="Family description; Region: UvrD_C_2; pfam13538"
/db_xref="CDD:205716"
gene complement(164475..165095)
/locus_tag="RBRH_00849"
/db_xref="GeneID:9985627"
CDS complement(164475..165095)
/locus_tag="RBRH_00849"
/codon_start=1
/transl_table=11
/product="cytochrome c555"
/protein_id="YP_004027834.1"
/db_xref="GI:312794912"
/db_xref="GeneID:9985627"
/translation="MSEAHEAPIKNPKQLIALVIASFALPIIVIALLVHYVDNATRTG
AGTDGLSHEQVSRRIAPVARVEVRPDQGQGAPDTLAAALASAAATPSAAVISSNSTQA
AAAAIAAIPSAPPPGSAATSASADAAQAGKALYQQVCQACHAAGVAGAPKLGDKAAWA
PRLKESMDTVYHYALHGKGAMPPKGGSNASDADVKAAVDYMVSTVK"
misc_feature complement(164481..>164696)
/locus_tag="RBRH_00849"
/note="Cytochrome c, mono- and diheme variants [Energy
production and conversion]; Region: CccA; COG2010"
/db_xref="CDD:32193"
misc_feature complement(164490..>164696)
/locus_tag="RBRH_00849"
/note="Cytochrome c5 [Energy production and conversion];
Region: CycB; COG3245"
/db_xref="CDD:33056"
gene 165377..165453
/locus_tag="RBRH_t001"
/db_xref="GeneID:9985628"
tRNA 165377..165453
/locus_tag="RBRH_t001"
/product="tRNA-Arg"
/db_xref="GeneID:9985628"
gene 165378..165453
/locus_tag="RBRH_t003"
/db_xref="GeneID:9988262"
tRNA 165378..165453
/locus_tag="RBRH_t003"
/product="tRNA-Arg"
/codon_recognized="CGG"
/db_xref="GeneID:9988262"
gene complement(165544..166053)
/locus_tag="RBRH_00850"
/db_xref="GeneID:9988208"
CDS complement(165544..166053)
/locus_tag="RBRH_00850"
/codon_start=1
/transl_table=11
/product="phage integrase"
/protein_id="YP_004027835.1"
/db_xref="GI:312794913"
/db_xref="GeneID:9988208"
/translation="MATPSDPCSCSRFIQAVFLCQTWKQFIPVQVKWQALRLTEQKSP
NNYLAMSLRESRDCRLEKGKTCVTNHSRTRFAGTSPCRRTRVSPRACSLHCKAAAARA
SFPVSLKRPCVLIFLKNDLRHAWASWHVQRGTSLHVLEELGGWETMEMVQRYAHLSCR
PLDAMGDAA"
misc_feature complement(165550..>165852)
/locus_tag="RBRH_00850"
/note="DNA breaking-rejoining enzymes, C-terminal
catalytic domain. The DNA breaking-rejoining enzyme
superfamily includes type IB topoisomerases and tyrosine
recombinases that share the same fold in their catalytic
domain containing six conserved active site...; Region:
DNA_BRE_C; cl00213"
/db_xref="CDD:211431"
misc_feature complement(order(165592..165594,165697..165705))
/locus_tag="RBRH_00850"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:29495"
misc_feature complement(order(165592..165594,165619..165621,
165688..165690,165697..165699))
/locus_tag="RBRH_00850"
/note="active site"
/db_xref="CDD:29495"
misc_feature complement(order(165592..165594,165619..165621,
165688..165690,165697..165699))
/locus_tag="RBRH_00850"
/note="Int/Topo IB signature motif; other site"
/db_xref="CDD:29495"
gene 166222..166362
/locus_tag="RBRH_00851"
/db_xref="GeneID:9985629"
CDS 166222..166362
/locus_tag="RBRH_00851"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027836.1"
/db_xref="GI:312794914"
/db_xref="GeneID:9985629"
/translation="MFVLHCFQKKSKSGISTPKADIDIIRARLKVAEAWARELRNAKT
NH"
misc_feature <166225..166347
/locus_tag="RBRH_00851"
/note="Phage derived protein Gp49-like (DUF891); Region:
Gp49; cl01470"
/db_xref="CDD:207421"
gene 166343..166678
/locus_tag="RBRH_00852"
/db_xref="GeneID:9985630"
CDS 166343..166678
/locus_tag="RBRH_00852"
/codon_start=1
/transl_table=11
/product="transcriptional regulator"
/protein_id="YP_004027837.1"
/db_xref="GI:312794915"
/db_xref="GeneID:9985630"
/translation="MQKRIIKGVEVQRSSGNVFADLGLPDAEKLKIKTGLVVEIRKAM
RALGLTQQEAAKRMGVPQPKVSGMMRGDFTNLSERKLMDCLNRLGYDIEIKVRPAAEP
VGHLTLALA"
misc_feature <166343..166453
/locus_tag="RBRH_00852"
/note="Helix-turn-helix XRE-family like proteins.
Prokaryotic DNA binding proteins belonging to the
xenobiotic response element family of transcriptional
regulators; Region: HTH_XRE; cl15761"
/db_xref="CDD:210161"
misc_feature 166460..166621
/locus_tag="RBRH_00852"
/note="Helix-turn-helix XRE-family like proteins.
Prokaryotic DNA binding proteins belonging to the
xenobiotic response element family of transcriptional
regulators; Region: HTH_XRE; cd00093"
/db_xref="CDD:28977"
misc_feature order(166463..166465,166475..166477,166550..166552)
/locus_tag="RBRH_00852"
/note="non-specific DNA binding site [nucleotide binding];
other site"
/db_xref="CDD:28977"
misc_feature order(166472..166474,166547..166549)
/locus_tag="RBRH_00852"
/note="salt bridge; other site"
/db_xref="CDD:28977"
misc_feature order(166493..166498,166529..166531,166538..166540,
166550..166555)
/locus_tag="RBRH_00852"
/note="sequence-specific DNA binding site [nucleotide
binding]; other site"
/db_xref="CDD:28977"
gene 166936..167238
/locus_tag="RBRH_00853"
/db_xref="GeneID:9985631"
CDS 166936..167238
/locus_tag="RBRH_00853"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027838.1"
/db_xref="GI:312794916"
/db_xref="GeneID:9985631"
/translation="MSQEDNTMPAAISTARLEARISTDLHSMLKRAAELQGRTMTDFV
VSAVQDAAQRAIEQAEVIRLSLADQECFAQALLSPPQPSPALKRAFSRRNKLLRAE"
misc_feature 166981..167220
/locus_tag="RBRH_00853"
/note="Protein of unknown function (DUF1778); Region:
DUF1778; pfam08681"
/db_xref="CDD:149664"
gene 167235..167744
/locus_tag="RBRH_00854"
/db_xref="GeneID:9985632"
CDS 167235..167744
/locus_tag="RBRH_00854"
/EC_number="2.3.1.-"
/codon_start=1
/transl_table=11
/product="acetyltransferase"
/protein_id="YP_004027839.1"
/db_xref="GI:312794917"
/db_xref="GeneID:9985632"
/translation="MSDAPFRLAPLDVTYDRAAFNSGSDPLDRYLREQVSQDVRRRMA
ACFVALADKNRIAGYYTLASASLLLADLPASISKKLPRYPTVPAVRMGRLAVDREFKG
RGLGGALLADALDRAARSEIAAYALMVDAKDKAVAAFYRHHSFIALPDSPLTLFLPLA
TVQFSRTNP"
gene 167858..168055
/locus_tag="RBRH_00855"
/db_xref="GeneID:9985633"
CDS 167858..168055
/locus_tag="RBRH_00855"
/codon_start=1
/transl_table=11
/product="transposase"
/protein_id="YP_004027840.1"
/db_xref="GI:312794918"
/db_xref="GeneID:9985633"
/translation="MLGELAALDSGSTLRRRLRRYAASDVLVIDEVGYLSYSNRHADL
LFELVTRHQLPMAVINEALRS"
misc_feature <167858..>168010
/locus_tag="RBRH_00855"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:213113"
gene complement(168278..169501)
/locus_tag="RBRH_00856"
/db_xref="GeneID:9985634"
CDS complement(168278..169501)
/locus_tag="RBRH_00856"
/codon_start=1
/transl_table=11
/product="phage integrase"
/protein_id="YP_004027841.1"
/db_xref="GI:312794919"
/db_xref="GeneID:9985634"
/translation="MDVFDDCVAALPCRRMDATGCAERSSRRSGKMSLYKRDRSPNWY
YKLYPPGGGKPLQGSTGTRDKAKAQEFHDRLKASLWDRVKLGHRPHYTWNEAVLEYVA
DREGMASIETTKTHLRWLDKHLSGVRLVDIDRERIDAIARIKRQEPRVIRTRYGEQAT
GRTVSEGTVRRVIGVLVAVLNAAVERGWLDRAPVRKPVKLVSKRIRWLTAAEADRLLA
ELPEHLADMAQFSLETGLRRANVTGLQWPQIDLVRRVAWIHPDQAKARKAITVPLSDT
AVAVLQRQLPKKRKVEHVESVFVYQGAPVRQTATAAWKKALKRAGIRDFRWHDLRHTW
ASWHVQRGTPLQVLKELGGWQTLEMVQRYAHLSADHLMQWVTPLTKLHDEPTGTTGPI
EPTIATWQSMPASST"
misc_feature complement(168389..168895)
/locus_tag="RBRH_00856"
/note="P22-like integrases, site-specific recombinases,
DNA breaking-rejoining enzymes, C-terminal catalytic
domain. This CD includes various bacterial and phage
integrases, including those similar to phage P22-like
integrases, DLP12 and APSE-1; Region: INT_P22_C; cd01192"
/db_xref="CDD:29513"
misc_feature complement(order(168413..168415,168440..168442,
168509..168511,168518..168520,168710..168712,
168791..168793))
/locus_tag="RBRH_00856"
/note="Int/Topo IB signature motif; other site"
/db_xref="CDD:29513"
gene complement(169770..170207)
/locus_tag="RBRH_00857"
/db_xref="GeneID:9985635"
CDS complement(169770..170207)
/locus_tag="RBRH_00857"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027842.1"
/db_xref="GI:312794920"
/db_xref="GeneID:9985635"
/translation="MTCATQSHDSRRVLSARTVAGGRVASGPATVVPVRTVHARRPGQ
ASRHALGHAANVNQSWMLDVGERNPLILEGIDTMSCPVFAINDARFATSPFGTADPLS
FFFFFFKLLIEKKKQACKEKALAAQARHESGVLCHHFPTLPIF"
gene complement(170204..172999)
/locus_tag="RBRH_00858"
/db_xref="GeneID:9985636"
CDS complement(170204..172999)
/locus_tag="RBRH_00858"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027843.1"
/db_xref="GI:312794921"
/db_xref="GeneID:9985636"
/translation="MASLDELKRLIDLHDLANRLGLKRGHGGDKALYHSPLHEDKNPS
LSIYVNHAKYGTGWRDHSANVGGSCVDLVMHARGGSVADAIRYLHDAYAIPIERPAQL
ERREKSSVEYIAERCLSARERVREYLGRRGISDAAMTAAISARTLGFNDWTSAKIPAG
EVGHGGPAAAFIVRAPDERHIVAVDMRYADPALNGHVKAQTQGDKSGYGWTADARKLD
RAKRVIVVESAINALSIDTCDIPGTAAFALRGLANVDRIDFAFLRGKQIVICLDNDEP
FPSDHPRAGQRPGPEAAWALYERLTALNISAVLVDQRQWLADLADGETEQKPINDVND
YLQLRGPRELQRALEQYEPWLIAGLPGDDSRRGRARVFLPSHDFAQYWRFRVRPDFTS
YIAKMERHEESGVETPVMTDLCGFRIAGISRVCVASANSTMTGDPDQAPTVYFAVSVQ
APRHGATLIRRVMLDGQLHNTDQWAKFGPIWAPAPFKRMVNILERGADLGARQAANFV
GLAWQNGRLIVNEGPDCYFTDADKQCPYHNLTFPSGPASDARRVIAAYQHTFKQNAAA
MALVWALGGHLKALLGFWPHMTVQADKGAGKSTLIKRLERTLAFTMFSGQSLQTEFRL
LTSISYTSHPVGWEEISARGQDVINKAVGLLQENYQYTVTRRGSDMTEYLLCAPVMLA
GEDVPVRSLLGKLVRTTLTGKKGPMLPDDLPRFPVRQWLECLAGLNRRDVLEQYRAVR
ELALATSRASGADDGALRMAGNYAALLLAWRYLCEFAGMDRSEGAFEHDLIAEMNHHV
AETSTDREPWIWIMETVLSEIDGGHYKHPYTFDVVDGQLCLLLRTGHAMDHIAHTSSL
REKWNSLPVKSDRVFKRQLQHAGVVVGEKEVERRIYMRRVPYLTPVSLERLAGFGLHV
SVHEDLATDAVEQRSRT"
misc_feature complement(170219..172999)
/locus_tag="RBRH_00858"
/note="DNA primase domain-containing protein; Region:
PHA02415"
/db_xref="CDD:177362"
misc_feature complement(172706..172993)
/locus_tag="RBRH_00858"
/note="CHC2 zinc finger; Region: zf-CHC2; cl15369"
/db_xref="CDD:199505"
misc_feature complement(172070..172339)
/locus_tag="RBRH_00858"
/note="Topoisomerase-primase domain. This is a nucleotidyl
transferase/hydrolase domain found in type IA, type IIA
and type IIB topoisomerases, bacterial DnaG-type primases,
small primase-like proteins from bacteria and archaea, OLD
family nucleases from...; Region: TOPRIM; cd00188"
/db_xref="CDD:173773"
misc_feature complement(order(172136..172138,172178..172180,
172184..172186,172307..172309,172316..172321))
/locus_tag="RBRH_00858"
/note="active site"
/db_xref="CDD:173773"
misc_feature complement(order(172184..172186,172319..172321))
/locus_tag="RBRH_00858"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:173773"
gene complement(173621..173860)
/locus_tag="RBRH_04064"
/db_xref="GeneID:9985637"
CDS complement(173621..173860)
/locus_tag="RBRH_04064"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027844.1"
/db_xref="GI:312794922"
/db_xref="GeneID:9985637"
/translation="MPKKGVCMATLAATPLVMPFDPASLPMEKRCEYLHKLWSADVDP
FVFVGIARRLGYGLCCHWDITADMPLLAPDLRILH"
gene complement(173914..174168)
/locus_tag="RBRH_00860"
/db_xref="GeneID:9988038"
CDS complement(173914..174168)
/locus_tag="RBRH_00860"
/codon_start=1
/transl_table=11
/product="Late control gene B protein"
/protein_id="YP_004027845.1"
/db_xref="GI:312794923"
/db_xref="GeneID:9988038"
/translation="MRTLNRCPHCRTRAKARSSREMSLTFREVTYQCDNPDCGHTYIV
NMEFARTLSPSAMPDLSLSLPLSSHVRERLAQQLKLPVSI"
misc_feature complement(174016..174153)
/locus_tag="RBRH_00860"
/note="Ogr/Delta-like zinc finger; Region: Ogr_Delta;
pfam04606"
/db_xref="CDD:203053"
gene 174132..174230
/locus_tag="RBRH_00861"
/db_xref="GeneID:9985638"
CDS 174132..174230
/locus_tag="RBRH_00861"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027846.1"
/db_xref="GI:312794924"
/db_xref="GeneID:9985638"
/translation="MYGNVDNGSVFAFRLTRYEIQGALVPMAKNMF"
gene complement(174214..174315)
/locus_tag="RBRH_04063"
/db_xref="GeneID:9985639"
CDS complement(174214..174315)
/locus_tag="RBRH_04063"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027847.1"
/db_xref="GI:312794925"
/db_xref="GeneID:9985639"
/translation="MASVTFKTTLGLPFLTLAHESSRTHVCQAKTCF"
gene complement(174257..174472)
/locus_tag="RBRH_00862"
/db_xref="GeneID:9988037"
CDS complement(174257..174472)
/locus_tag="RBRH_00862"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027848.1"
/db_xref="GI:312794926"
/db_xref="GeneID:9988037"
/translation="MTTVKGPRRSPRGALSGTSVYVGLTPLERAELEQIAAARHRSIS
SMARELICIGKRHVQDDPGSSVPNTGP"
gene 174522..175064
/locus_tag="RBRH_00863"
/db_xref="GeneID:9985640"
CDS 174522..175064
/locus_tag="RBRH_00863"
/codon_start=1
/transl_table=11
/product="transcriptional regulator"
/protein_id="YP_004027849.1"
/db_xref="GI:312794927"
/db_xref="GeneID:9985640"
/translation="MRPKRLVNILWVQMNTIGARLREERLRLGLSQEEFAAIGGVLRR
AQSHYESDERSPDAKYLSAVAELGVDLLYVLRGTRQASDEAGEAATSSEFDTEEQELI
ENYRALNEAGKAALHAFLSTCFNSSAMLVSAVPRRAKRLAEHRRAAFDQRTAENIERA
IAHIKRLRAERAARAKKSNK"
gene 175316..175693
/locus_tag="RBRH_00864"
/db_xref="GeneID:9985641"
CDS 175316..175693
/locus_tag="RBRH_00864"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027850.1"
/db_xref="GI:312794928"
/db_xref="GeneID:9985641"
/translation="MYRNPKRSHGADATATNAERHAGACAPMLSTRFYLDERDDVCRD
ARAEIDNAMKSVGLVLETALEAMENLRNVRDALTPHDNAPGATCVGGCTRPDASGQLK
HRRCAGLLRYAKRLAFSWWHIGR"
gene complement(176002..177027)
/locus_tag="RBRH_00865"
/db_xref="GeneID:9985642"
CDS complement(176002..177027)
/locus_tag="RBRH_00865"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027851.1"
/db_xref="GI:312794929"
/db_xref="GeneID:9985642"
/translation="MSGPRGTRMQPQPDYRITLDGRDLSRVIAPHLVNLTLSESRADE
ADTVELVLDDSCNTFAVPKRGALIHVAIGWTGEPLVDKHSFTVDEIEHSGAPDLLTIR
ARSASMTNALRERREHSWHHQTLGSIVHTIAARHALKPTIADALAPITIAHIDQTHES
DMSFLTRLAKRYDAVMNIKDQHLLLMPIGSGTTASGKPLRDIVLTRASGDQHRYCIVQ
RESYTAVRAYWHSNGQAKRRSVLVGDDNSRSIKVLPEDYPSEAEARAAAQAEHARAQR
SQATLSYTLAHGRAELFVEVPITLAGFKPEIDATPWLIKQVTHTIGETGFTSALELEV
RSGPATA"
misc_feature complement(176014..177018)
/locus_tag="RBRH_00865"
/note="tail protein; Provisional; Region: D; PHA02561"
/db_xref="CDD:164956"
gene complement(177024..177461)
/locus_tag="RBRH_00866"
/db_xref="GeneID:9985643"
CDS complement(177024..177461)
/locus_tag="RBRH_00866"
/codon_start=1
/transl_table=11
/product="phage tail protein"
/protein_id="YP_004027852.1"
/db_xref="GI:312794930"
/db_xref="GeneID:9985643"
/translation="MMMSLDQFVFGLKTVPYRELQRQRSWKHRTTSRVGARDGSQYTG
IGEDTITLNGLLAPDNGIGTTASLAQLVRMADAGHAYVLVDGIGHVYGAFVIDSLRET
ASYHTRAGIARRIEFSLTIKRVDERQLASVHDAISSQRVTNEQ"
misc_feature complement(177084..177443)
/locus_tag="RBRH_00866"
/note="Phage P2 GpU; Region: Phage_P2_GpU; pfam06995"
/db_xref="CDD:148551"
gene complement(177480..180455)
/locus_tag="RBRH_00867"
/db_xref="GeneID:9985644"
CDS complement(177480..180455)
/locus_tag="RBRH_00867"
/codon_start=1
/transl_table=11
/product="phage tail protein"
/protein_id="YP_004027853.1"
/db_xref="GI:312794931"
/db_xref="GeneID:9985644"
/translation="MDPTQNLRVMADMVEKLTRPLKAALTGRRGVARSLNDTRRALAE
MGKTQQCIAQFRALRGALAATASQLDVTRARVTALAAALRAGGPPSRQMLAEFHQAKR
SAAQLATVHDAQVARVQALRSQLAHAGVNTRQLVHHERTLRASIASTTASMNQQLSKL
DALNTRKKRLAEVRRHRHDTGRMLDGSARWRADEDPIDYLRLKLGRARHWLREAIHAE
REAMRIDVLGAGQPVSANAMTFAREMKTVGVSISERLTMMRKALPILGNEHDAQMALP
ALAKVKFLNEVMFDADDARANTQTFMTMLPIIQQRGSMRHIATFEREASTMRQMLTAT
QARVGVDQWRAFIQAGGAAAKQLRDDAFFFQMEPLIDAMHGHAAGAGLTAAYNHLYEG
KTTLAAAKQMIALGLLNPKKIEYTKLGAIKAFQPDALAGSEILKASPFEWLEQVLLPK
LRAHGITDHDKIKNVIPTILPDRAAAEFFSNLYRLRTAIHHNAQLGVGIDGIDALHTN
ALQITRGREVAALAQLRDLMHETGQHILPMYNEALAYTTALTEKWLTFMREHPAQSKV
VVQALAGVAAILAAISTLSVALAGILAPLAIIKYSLATLGLQGGTLSRLLGTLLKAWR
LLGHGIMLVGRVLLANPIGLAITAIAFAAFQIYRYWGPIQGFFSGLWKRVQQTFDGAL
SNLTARIGQCSPLSLFKQAFTAVLQWFDSDLPATFWEFGAKLMSQWVTGIRSQLAAVK
ETITEVANRTVEWFQDKLRELGALLRWACNGGLMEIGTWFIDGSPIGLFYRAFAAVLQ
WFGIDLPKKFSQFGVNVMLGLASGIKSQLGAVKDAITEVANSTVMWFKERLGMHSPSR
IFGELGGFIGQGAARGIEGEQSRVARAALALASVAASAFAAPAVGASAFAASAFGAAV
VNQSTVPFVRASVPIDARASVTRASAAASADPIASSIVIHVHPPAGADTADIARMVRA
EFERAQRAKLSRAGSRLSD"
gene complement(180458..180571)
/locus_tag="RBRH_00868"
/db_xref="GeneID:9985645"
CDS complement(180458..180571)
/locus_tag="RBRH_00868"
/codon_start=1
/transl_table=11
/product="phage tail protein"
/protein_id="YP_004027854.1"
/db_xref="GI:312794932"
/db_xref="GeneID:9985645"
/translation="MADIATVFGWTPTTMQDFSITELMDWRERARQRSTSE"
misc_feature complement(180470..180571)
/locus_tag="RBRH_00868"
/note="Phage P2 GpE; Region: Phage_P2_GpE; pfam06528"
/db_xref="CDD:148250"
gene complement(180580..181011)
/locus_tag="RBRH_00869"
/db_xref="GeneID:9985646"
CDS complement(180580..181011)
/locus_tag="RBRH_00869"
/codon_start=1
/transl_table=11
/product="phage protein"
/protein_id="YP_004027855.1"
/db_xref="GI:312794933"
/db_xref="GeneID:9985646"
/translation="MARAWIESGPYSLLTQHTESHVKHAPTSDNERSAAPIQDTLRND
STQSNTHTLDTPLVRGKQTLDAITLRKPTVGELRGASLSDLINLDVAALQKVLPRISS
PTLTEHDVANLDPADLIMLGGIFASFLMPKAVKSKLDSPSA"
misc_feature complement(180622..180864)
/locus_tag="RBRH_00869"
/note="Mu-like prophage FluMu protein gp41; Region:
FluMu_gp41; pfam10109"
/db_xref="CDD:204397"
gene complement(181017..181526)
/locus_tag="RBRH_00870"
/db_xref="GeneID:9985647"
CDS complement(181017..181526)
/locus_tag="RBRH_00870"
/codon_start=1
/transl_table=11
/product="phage major tail protein"
/protein_id="YP_004027856.1"
/db_xref="GI:312794934"
/db_xref="GeneID:9985647"
/translation="MSMPRKLKGFNLFHNGTNFAGQVAEVTLPKLTRKMEDYQGGGMS
GPIKIDFGQEPIQIEWTCGGLMRDVLAQYGIMQHDGVLLRFAGGYQAEDAPSVDAIEI
VIRGRHSEIDPGTAKAKEDTAFKVTTVASYYKLSINGEDIIEIDLINMMENINGSNLL
APLRMAVGL"
misc_feature complement(181020..181526)
/locus_tag="RBRH_00870"
/note="major tail tube protein; Provisional; Region: FII;
PHA02600"
/db_xref="CDD:164995"
gene complement(181542..182714)
/locus_tag="RBRH_00871"
/db_xref="GeneID:9985648"
CDS complement(181542..182714)
/locus_tag="RBRH_00871"
/codon_start=1
/transl_table=11
/product="phage tail sheath protein"
/protein_id="YP_004027857.1"
/db_xref="GI:312794935"
/db_xref="GeneID:9985648"
/translation="MPQDYHHGVRVLEINAGTRPIRTVSTAVVGLVATAPDADPNAFP
LDTPVLVTNVQQAAGQAGTQGTLARTLEAIAAQSQPVTVVVRVAEGKDEDETQTHVIG
GVNAAGQYTGMQALLAAQAKFGVKPRILGAPGLDTQAVATALGTLAQKLRGFAYVGTH
GAQTKEDATAYRRRFSQREMMVLWPDFLAWDSTTNAPDTLAASAVALGLRAKIDESVG
WHKTLSNVGINGVTGISRDVFWDLQDPATDAGYLNEQQVTTLINQTGYRFWGSRTCSD
DPLFAFEHYTRTSQVLADTMADAHLLYVDKPLHPSLVRDVIEGINAKFRELIAHGYLL
GGSAWYDETVNTPETMKAGKLAIDYDYTPVPPIENLTLRQRITDRYLADFASRVVA"
misc_feature complement(181551..182714)
/locus_tag="RBRH_00871"
/note="major tail sheath protein; Provisional; Region: FI;
PHA02560"
/db_xref="CDD:164955"
gene complement(182772..183533)
/locus_tag="RBRH_00872"
/db_xref="GeneID:9985649"
CDS complement(182772..183533)
/locus_tag="RBRH_00872"
/codon_start=1
/transl_table=11
/product="tail fiber assembly protein"
/protein_id="YP_004027858.1"
/db_xref="GI:312794936"
/db_xref="GeneID:9985649"
/translation="MLIHQYDHQTGQYVSSRLADPDPINPTRWLIPSCCTDVPLPERQ
RNQWPFFRNGAWVLLPDFRGQRLFRKVNGAAAEILAPGITADDAGLTPIPRPGDEYVW
TDDGWQIDPRIIAQRERDAAMREFDRRMSEAQAANAGKADAYAAGLLSDEQVALFKAW
SQYQMELVRVVNAADFPTHVQWPSPPDEQAIVTKALSERVLSQVHEQKAHRASHYAAQ
HAAVQHADDASLNDELVPGLDTDNASTPDVSDREY"
misc_feature complement(182973..183347)
/locus_tag="RBRH_00872"
/note="Caudovirales tail fibre assembly protein; Region:
Caudo_TAP; pfam02413"
/db_xref="CDD:145517"
gene complement(183555..185471)
/locus_tag="RBRH_00873"
/db_xref="GeneID:9985650"
CDS complement(183555..185471)
/locus_tag="RBRH_00873"
/codon_start=1
/transl_table=11
/product="phage tail protein"
/protein_id="YP_004027859.1"
/db_xref="GI:312794937"
/db_xref="GeneID:9985650"
/translation="MAGTPITVSEAFRAALVSGNHQGTVAHTVTHIGLCTAAFDASGA
ALKQLPHELKRIDTFGGQHVDAATIHITIQDNSPDQYALYGFGLYLEDGTLAAYYSQP
AGDGPIMEKSPAATLLLSTDIQFTTIDAGTLGFESASFVNPPASTEHQGVIEIATQAE
VDAGEDDTRAVTPRTANARYAPREWVLRHALPLRDALEQNVDLNTVTSTGIYLQPYTR
GASVELNYPVAFAGKLQVYALYWTVYQTYTVFNSGISYTRVRYDRTWSPWRRVLDDGS
DVVVSGIGAFCGALGATSLRAAATGVVLGANVGGDLVFKYTEAPTHHKLWDIKTSANA
FECRAVNDGWTDVNRWLIVTRAGLDISTVGLATDGGRVLIGEGATDDGASALQVAGTA
TAATPPTGDVSHKLATTQFVANAISEATIGQIIIEARTSVRAGCLKLAGVLIQRDDYP
QLWTYAQSCGALVSEDEWPDNPGCFSTGDGKTTFRIPEVRGEHLRFWDDGRGVDSGRG
IGTWQDSQNRAHAHAATASVEGDHVHGAWMDERGWHIHAVHDPGHNHATEVPYGGGHS
PVRSVVGPYGIEGYYNTHHTLTGISIHGDGNHIHNVGIGNAGNHSHTITVNDDGGTEA
RPRNIALLAMIRAY"
misc_feature complement(<184929..>185039)
/locus_tag="RBRH_00873"
/note="long tail fiber, proximal subunit; Provisional;
Region: 34; PHA02584"
/db_xref="CDD:177413"
misc_feature complement(183732..>184037)
/locus_tag="RBRH_00873"
/note="Phage-related tail fibre protein [General function
prediction only]; Region: COG5301"
/db_xref="CDD:34890"
gene complement(185474..186067)
/locus_tag="RBRH_00874"
/db_xref="GeneID:9985651"
CDS complement(185474..186067)
/locus_tag="RBRH_00874"
/codon_start=1
/transl_table=11
/product="tail protein I"
/protein_id="YP_004027860.1"
/db_xref="GI:312794938"
/db_xref="GeneID:9985651"
/translation="MKRPIAPVSSSSTVGWPMSELLPPNATRLERRLATMNARLSDIA
VPLGTLMNADTVPLTLLPWLAWHLGVDTWKDYWPESVKRARVRAAIHIARHKGTAEAV
RQVCASFGAHVAMREWFEQTPRGKPGTFEIVMTVGERGDLPCTAQYVADIIAEVDCVK
RGSAHYTITQHMVRTGSVGLRAATHLGLYRRLSLCDN"
misc_feature complement(185588..186004)
/locus_tag="RBRH_00874"
/note="Phage tail protein (Tail_P2_I); Region: Tail_P2_I;
pfam09684"
/db_xref="CDD:150371"
gene complement(186009..186914)
/locus_tag="RBRH_00875"
/db_xref="GeneID:9985652"
CDS complement(186009..186914)
/locus_tag="RBRH_00875"
/codon_start=1
/transl_table=11
/product="baseplate assembly protein J"
/protein_id="YP_004027861.1"
/db_xref="GI:312794939"
/db_xref="GeneID:9985652"
/translation="MSTTPIDLSQLPAPDVIEPLDYETLFAQRKAQLIALYPLEEQAD
IAATLALESEPMVKLLQESAYRELVLRQRVNDAARALLLAYASGATLDHLGALFDVKR
LLICAGDPETRRDPVYEDCDDYRERIQLAPRGFSVAGPLDAYVFHARSADGRVLSADA
YSPSPCVMVVTILSREGDGTASDELLTVVREALEKKRPQTDEVIVRSAKIVPYTIRAT
LKFFSGPDRAVALAEANRCTTQFAREMHRIGREVTKDGLYASMRVAGVQKVLLDTPAD
GVAVARDEAAYCTGIELIDGGVANE"
misc_feature complement(186021..186905)
/locus_tag="RBRH_00875"
/note="Baseplate J-like protein; Region: Baseplate_J;
cl01294"
/db_xref="CDD:174609"
gene complement(186911..187282)
/locus_tag="RBRH_00876"
/db_xref="GeneID:9985653"
CDS complement(186911..187282)
/locus_tag="RBRH_00876"
/codon_start=1
/transl_table=11
/product="baseplate assembly protein W"
/protein_id="YP_004027862.1"
/db_xref="GI:312794940"
/db_xref="GeneID:9985653"
/translation="MKGMHATTGRTVTGLAHLHQSIARIITTPLGTCIQRRTFGSDML
EHVDAPNNGTTRTRLYAAIATALMRWEPRLILTRVQLSSEPAERRAGMQTVDIEGITA
ETDEAFSVRVPMSVSGSGSRA"
misc_feature complement(186956..187273)
/locus_tag="RBRH_00876"
/note="Gene 25-like lysozyme; Region: GPW_gp25; cl01403"
/db_xref="CDD:207400"
gene complement(187279..188043)
/locus_tag="RBRH_00877"
/db_xref="GeneID:9985654"
CDS complement(187279..188043)
/locus_tag="RBRH_00877"
/codon_start=1
/transl_table=11
/product="baseplate assembly protein V"
/protein_id="YP_004027863.1"
/db_xref="GI:312794941"
/db_xref="GeneID:9985654"
/translation="MGRHDIGQCVHRALVPGNMGDMDANELCRLIVNLIRKGVVLDVN
CASCPPTCRVAVGDATDAQDAGLQTNWIPWMTLAAGTTREWLPPTKGEQVLLLCPMGD
PAQGVALRGLFSDCADTPSRDPAVHTRVYPDGAQLTYDHASHTLSATLPDSACVQIVS
PASVTVCTDEAAIVANRITLDAEQTTCTGALLVQGPFAFESGMTGRSGQDSGAGATMT
IDGQAHFTGDVTSQGVSLPRHTHRDQGDGQLVSAPQ"
misc_feature complement(187303..187965)
/locus_tag="RBRH_00877"
/note="phage baseplate assembly protein V; Region:
phage_P2_V; TIGR01644"
/db_xref="CDD:211676"
misc_feature complement(187675..187932)
/locus_tag="RBRH_00877"
/note="Phage-related baseplate assembly protein; Region:
Phage_base_V; pfam04717"
/db_xref="CDD:203075"
gene 188020..188232
/locus_tag="RBRH_00878"
/db_xref="GeneID:9985655"
CDS 188020..188232
/locus_tag="RBRH_00878"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027864.1"
/db_xref="GI:312794942"
/db_xref="GeneID:9985655"
/translation="MAYVVAAHTANASCRGTSRHVNRSDNAALPRYRLICISSTSIPV
CSNVLSEIVNQLHSNDALHFACELHD"
gene 188308..188814
/locus_tag="RBRH_00879"
/db_xref="GeneID:9985656"
CDS 188308..188814
/locus_tag="RBRH_00879"
/EC_number="2.1.1.72"
/codon_start=1
/transl_table=11
/product="adenine-specific methyltransferase"
/protein_id="YP_004027865.1"
/db_xref="GI:312794943"
/db_xref="GeneID:9985656"
/translation="MQKYIGSDTKTVYEDFECDNMNPRAWAFWCRAWLTESRRALKPG
GLLVCFIDWRQLPRLTDVMRATGWVQRGIAVCDKTPSRACPRRGGFKQQTELIVWASK
GVIRQRDVYTPGVRPCALGLPKRHLTEKPLELARQIVRLAPADGVVCDLFAGSGTFLV
AAKEAGLN"
misc_feature 188326..188811
/locus_tag="RBRH_00879"
/note="DNA modification methylase [DNA replication,
recombination, and repair]; Region: COG0863"
/db_xref="CDD:31203"
misc_feature 188362..188811
/locus_tag="RBRH_00879"
/note="DNA methylase; Region: N6_N4_Mtase; pfam01555"
/db_xref="CDD:201857"
gene complement(188966..190183)
/locus_tag="RBRH_00880"
/db_xref="GeneID:9985657"
CDS complement(188966..190183)
/locus_tag="RBRH_00880"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027866.1"
/db_xref="GI:312794944"
/db_xref="GeneID:9985657"
/translation="MNSQTYHALQERRLGWLCHKRISHIAPLDRTGTEIHNRAAVQQL
LTEIERIRAEPVRAELLQTLWQRAKIQYEVKPEVFKAIFQAAGRLPKQGLQVQKDMIQ
SILGTPLQYQHTLYKFVYADAERRSPEQGSTWGAIASMLPFYGRIPPVWLDASQIESR
YRAFLSRLPALNTSEQAELITVLAKVLAAFSLSGSSFDYFSYRYDLANATILELYETL
FQWMQRLPASHRGAPIGALANRVSMLPEAQRPVYFAHLRHLTLSLPDHQLGSALRYLP
GALVRVIPPNQHAYELSLLEPALQRVPPAQRALATLGLLEETPQLNDALSKQVWQRAM
RLLDGSNGPDIVKVIHRIHIIGLRSNQQQWEDARTEIKAFFERNRFDEATRNAMLNAQ
NYDLFRDYPIQIQ"
gene complement(190251..191129)
/locus_tag="RBRH_00881"
/db_xref="GeneID:9985658"
CDS complement(190251..191129)
/locus_tag="RBRH_00881"
/codon_start=1
/transl_table=11
/product="transposase"
/protein_id="YP_004027867.1"
/db_xref="GI:312794945"
/db_xref="GeneID:9985658"
/translation="MKPSRLRELTTDLMQRFGVSQRQACRVLKLSRSVYSYQSIARDS
NAIALRIKQITQTRVHYGYRRVHVMLRREGWRDNHKRVYRLYREQGLSLRHKRPRRNK
AARLRQPKQLVTAINEIWSMDFVADALFDGRRLRTLTIVDNYTRECLAIEVGATLRGE
DVVAALDRIAVSRPLPRFIKADNGSEFISKVLDKWAYERGVEIDFSRPGKPTDNAKNE
SFNGRLREECLNEHWFLSLEDAKRKIEAWRQYYNEARPHSALQWMTPAEFACQCRPRA
DSAHPEEPEISTLERH"
misc_feature complement(190833..191006)
/locus_tag="RBRH_00881"
/note="HTH-like domain; Region: HTH_21; pfam13276"
/db_xref="CDD:205456"
misc_feature complement(190317..191003)
/locus_tag="RBRH_00881"
/note="insertion element IS2 transposase InsD;
Provisional; Region: PRK14702"
/db_xref="CDD:173165"
misc_feature complement(190446..190781)
/locus_tag="RBRH_00881"
/note="Integrase core domain; Region: rve; pfam00665"
/db_xref="CDD:201381"
misc_feature complement(190335..190535)
/locus_tag="RBRH_00881"
/note="Integrase core domain; Region: rve_3; pfam13683"
/db_xref="CDD:205859"
gene complement(191126..191392)
/locus_tag="RBRH_00882"
/db_xref="GeneID:9985659"
CDS complement(191126..191392)
/locus_tag="RBRH_00882"
/codon_start=1
/transl_table=11
/product="transposase"
/protein_id="YP_004027868.1"
/db_xref="GI:312794946"
/db_xref="GeneID:9985659"
/translation="MKKSRYTEEQITFALKQAELGTPAAEVCRKMGISDATFYNWRQK
YGGLGPSELRRLKQLEEENTKLKRLVAELSLDKSMLQDVLSKKL"
misc_feature complement(191177..191389)
/locus_tag="RBRH_00882"
/note="Transposase; Region: HTH_Tnp_1; pfam01527"
/db_xref="CDD:201841"
misc_feature complement(order(191270..191278,191282..191287,
191381..191389))
/locus_tag="RBRH_00882"
/note="DNA-binding interface [nucleotide binding]; DNA
binding site"
/db_xref="CDD:119388"
gene complement(191422..192684)
/locus_tag="RBRH_00883"
/db_xref="GeneID:9985660"
CDS complement(191422..192684)
/locus_tag="RBRH_00883"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027869.1"
/db_xref="GI:312794947"
/db_xref="GeneID:9985660"
/translation="MRVSDLLLSLPMDFDLNAALNDYRAYICALESCPQPAASAPPLR
PLSSGALINTSARRPTAYQDLPPELIERIGDYVPVQEVGNFSAVDRRTYHATQSRRLV
YRYWQRANQVESLESINRILEEMDGALKDPAQHVEALEALRQRLKELPWDEQSEAFKR
VYMAAQRIPKDGVRIQKAMLCTLDEWLGLQRAEAFDFAHALAEQRGPGQDNVWRELAI
ALWSLPSSSPAFIERYQVLLARLPSLSVAEQAELIPSLSGLLRRFDRTNPSLSALHAL
LRDQALRLPPSYQGEAVGTLAVDAKVLPEAERLIRYVQMRDLALSLPDDQWGLALRHL
PAGLNMLPPEQRIQELALFERHLARVPEAQRARVAHGLLSSTRDLDKAQSQRVWLQVL
SLFNGRGEAALLRLPQKTGPFKSRKNPA"
gene complement(192872..193327)
/locus_tag="RBRH_00884"
/db_xref="GeneID:9985661"
CDS complement(192872..193327)
/locus_tag="RBRH_00884"
/codon_start=1
/transl_table=11
/product="tail completion protein S"
/protein_id="YP_004027870.1"
/db_xref="GI:312794948"
/db_xref="GeneID:9985661"
/translation="MHLNTGPARCLRDYHRPHAALHCTAWALRQAQKARIAAQRNPDG
TAYAPRKARASPKRLRNKRGRIKCTIFAKLRTARLMRIEVSEYESTIGFVGRASRIAR
VHQFGERERVAPRGPYYRYPVRVLLGLTDTDRRLIRERLLAYVCESLSE"
misc_feature complement(192893..>193207)
/locus_tag="RBRH_00884"
/note="Phage virion morphogenesis family; Region:
Phage_tail_S; cl02089"
/db_xref="CDD:154737"
gene complement(193337..193486)
/locus_tag="RBRH_00885"
/db_xref="GeneID:9985662"
CDS complement(193337..193486)
/locus_tag="RBRH_00885"
/codon_start=1
/transl_table=11
/product="tail completion protein R"
/protein_id="YP_004027871.1"
/db_xref="GI:312794949"
/db_xref="GeneID:9985662"
/translation="MRKHEAADIAIKLKLTESVVVRTDAMGQRVIEHVDDTPTEAVML
WVVQP"
misc_feature complement(193382..>193477)
/locus_tag="RBRH_00885"
/note="P2 phage tail completion protein R (GpR); Region:
P2_Phage_GpR; pfam06891"
/db_xref="CDD:148486"
gene complement(193535..193699)
/locus_tag="RBRH_00886"
/db_xref="GeneID:9985663"
CDS complement(193535..193699)
/locus_tag="RBRH_00886"
/codon_start=1
/transl_table=11
/product="tail completion protein R"
/protein_id="YP_004027872.1"
/db_xref="GI:312794950"
/db_xref="GeneID:9985663"
/translation="MSVFIDQGTLVATGTRSPSFEYRYMLNVLILDYAGDADAIMVAI
IEWVRAIQPD"
misc_feature complement(<193538..193699)
/locus_tag="RBRH_00886"
/note="P2 phage tail completion protein R (GpR); Region:
P2_Phage_GpR; pfam06891"
/db_xref="CDD:148486"
gene complement(193772..193903)
/locus_tag="RBRH_00887"
/db_xref="GeneID:9985664"
CDS complement(193772..193903)
/locus_tag="RBRH_00887"
/codon_start=1
/transl_table=11
/product="protein LYSB"
/protein_id="YP_004027873.1"
/db_xref="GI:312794951"
/db_xref="GeneID:9985664"
/translation="MPAMAPRTNGELAESLTAARAAWAACAAQIDMIVECQNAHRDE"
gene complement(193872..194312)
/locus_tag="RBRH_00888"
/db_xref="GeneID:9985665"
CDS complement(193872..194312)
/locus_tag="RBRH_00888"
/codon_start=1
/transl_table=11
/product="protein LYSB"
/protein_id="YP_004027874.1"
/db_xref="GI:312794952"
/db_xref="GeneID:9985665"
/translation="MRGKLFGWTLATAALLTIVTEWHVIRTLLAQLEGARTAERRAVQ
ASIERDATIEQLLRDAREKDAQHAQLARMRTAIDSTLAAYQEAFRRLIDENQAVRHWA
ATALPDDVVRVHASAALTGAADYVARMRARVAVHDAGDGAAHEW"
misc_feature complement(193896..194249)
/locus_tag="RBRH_00888"
/note="phage lysis regulatory protein, LysB family;
Region: phage_LysB; TIGR03495"
/db_xref="CDD:132534"
gene complement(194337..195143)
/locus_tag="RBRH_00889"
/db_xref="GeneID:9985666"
CDS complement(194337..195143)
/locus_tag="RBRH_00889"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027875.1"
/db_xref="GI:312794953"
/db_xref="GeneID:9985666"
/translation="MNPLRLGDHGYEVGRLQRRLIRAGYRPQVTHRYDAATEAAVTAL
QIHTGLVVDGIAGPQTLIALNNGEHDVKHCTDADLTRAADTLGVSIACIRAVKDVESR
GVGFLRNGRPTILFERHVFWQRLTVRHIDPAPLAAQYPNIVAPTCGGYHGGAAEYTRL
TIATQIDSLAAHESASWGAFQVLGQHWARLGYASVDDFVGCMEANEAEQLDAFVRFVA
ADRRLLAALRERQWTQFARLYNGPGYARNLYDAKLAQAYRKYAQATALAA"
misc_feature complement(194952..195119)
/locus_tag="RBRH_00889"
/note="Putative peptidoglycan binding domain; Region:
PG_binding_1; pfam01471"
/db_xref="CDD:201815"
misc_feature complement(194361..194882)
/locus_tag="RBRH_00889"
/note="Protein of unknown function (DUF3380); Region:
DUF3380; pfam11860"
/db_xref="CDD:152296"
gene complement(195140..195445)
/locus_tag="RBRH_00890"
/db_xref="GeneID:9985667"
CDS complement(195140..195445)
/locus_tag="RBRH_00890"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027876.1"
/db_xref="GI:312794954"
/db_xref="GeneID:9985667"
/translation="MLFCERHAEMPSFLFCMTLAAHCASLLCVLAYRRRGARHRAGIA
WLAWALAAALGSAIIDRVLYDRPAGLSEAVTAVFLAAWMWAAHGNVARLLDASAPAR"
gene complement(195420..195785)
/locus_tag="RBRH_00891"
/db_xref="GeneID:9985668"
CDS complement(195420..195785)
/locus_tag="RBRH_00891"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027877.1"
/db_xref="GI:312794955"
/db_xref="GeneID:9985668"
/translation="MTWGPPDMTEPNLTTAAVLSIALGLASVMPGIDGNALIGAFTGA
ALVVVSSQDIGLLKRVAYLLISLVMGYLAAPEIVHATAIRSTGVAAFFAAALVIVITL
QLIERIRSADFLAFLRKAR"
gene complement(195782..196054)
/locus_tag="RBRH_00892"
/db_xref="GeneID:9985669"
CDS complement(195782..196054)
/locus_tag="RBRH_00892"
/codon_start=1
/transl_table=11
/product="tail protein X"
/protein_id="YP_004027878.1"
/db_xref="GI:312794956"
/db_xref="GeneID:9985669"
/translation="MHCALNSQRDQRHGTVNIQANPMKIISRQGDTLDALCWRHYGRT
DGTVEAALQANPGLADLGVVLPMGTVVELPEPAAIFSTRPLVQLFD"
misc_feature complement(195821..195988)
/locus_tag="RBRH_00892"
/note="Phage Tail Protein X; Region: Phage_tail_X;
pfam05489"
/db_xref="CDD:147588"
gene complement(196701..197231)
/locus_tag="RBRH_00893"
/db_xref="GeneID:9985670"
CDS complement(196701..197231)
/locus_tag="RBRH_00893"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027879.1"
/db_xref="GI:312794957"
/db_xref="GeneID:9985670"
/translation="MGRWPPLASARRWSSFVLFSWLVNAQLSGRQPAAAISPACPTRR
ATHHALSGARPVQQVQVSIDRLPHETQREGTHDWRARWLVAPLYLGGLRISEVFTQTM
GQFFCQRDTDGHKRWWLAVIDKGGNEPLTHADWQRQQRAAGARRPVKTATSCWRSQIS
KGSSELRAPVDRQKRQ"
misc_feature complement(<196848..197057)
/locus_tag="RBRH_00893"
/note="DNA breaking-rejoining enzymes, C-terminal
catalytic domain. The DNA breaking-rejoining enzyme
superfamily includes type IB topoisomerases and tyrosine
recombinases that share the same fold in their catalytic
domain containing six conserved active site...; Region:
DNA_BRE_C; cl00213"
/db_xref="CDD:211431"
gene complement(197373..197726)
/locus_tag="RBRH_00894"
/db_xref="GeneID:9985671"
CDS complement(197373..197726)
/locus_tag="RBRH_00894"
/codon_start=1
/transl_table=11
/product="Fic family protein"
/protein_id="YP_004027880.1"
/db_xref="GI:312794958"
/db_xref="GeneID:9985671"
/translation="MVHNSDNSTADILFSSENEAQARLAMNSVLSEANLCRIIVPTVY
REDYLLPLKRLSNQKDAAAFIQSMARIQDWTSRFDYAQPRQALRQQLEQSNAFQEDLR
NYRLIFPENASPYVK"
gene complement(197908..198129)
/locus_tag="RBRH_00895"
/db_xref="GeneID:9985672"
CDS complement(197908..198129)
/locus_tag="RBRH_00895"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027881.1"
/db_xref="GI:312794959"
/db_xref="GeneID:9985672"
/translation="MPNPRSAASIDGQGILAFGELRAQCLELDLGGSGSLPGGFRLGH
RAIAGGFRFMRFMTRLDPPSRVWPARTLR"
gene 198188..198715
/locus_tag="RBRH_00897"
/db_xref="GeneID:9985673"
CDS 198188..198715
/locus_tag="RBRH_00897"
/codon_start=1
/transl_table=11
/product="transposase"
/protein_id="YP_004027882.1"
/db_xref="GI:312794960"
/db_xref="GeneID:9985673"
/translation="MAPIGVGDADRGQRDAWRTRTAAARRHECGRDADSCLNLDEKYA
GQTRSRDEPDPKKSNQWYFGMKAHISVDAESGLVHRVVTTTAKVNDKRCFDELLHGDE
TSVWADRDYNYPDIRRRCAEQSISACIARRKRPGEPRWRIEREINHVIAKVRSRVEHA
FRILKQPFSYVKTRY"
misc_feature 198338..198712
/locus_tag="RBRH_00897"
/note="Transposase DDE domain; Region: DDE_Tnp_1;
pfam01609"
/db_xref="CDD:201886"
misc_feature 198344..198712
/locus_tag="RBRH_00897"
/note="DDE superfamily endonuclease; Region: DDE_4;
cl15789"
/db_xref="CDD:211471"
gene complement(198835..198951)
/locus_tag="RBRH_00898"
/db_xref="GeneID:9985674"
CDS complement(198835..198951)
/locus_tag="RBRH_00898"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027883.1"
/db_xref="GI:312794961"
/db_xref="GeneID:9985674"
/translation="MLHNSVFQSEASNAALKVRFAGLQATAQGGARHSIECN"
gene complement(199116..199703)
/locus_tag="RBRH_00337"
/db_xref="GeneID:9985675"
CDS complement(199116..199703)
/locus_tag="RBRH_00337"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027884.1"
/db_xref="GI:312794962"
/db_xref="GeneID:9985675"
/translation="MKAKHVKTLEAIFQKPTPGSIVFVDIQSLVIALGGEVREGAGSR
VAFELNGSRQYLHRPHPGKEAKKYQVEELRQWVNAIGSQTMMNTMAYKGYLARVEFDP
RDEIFVGRVLGVADRISFHGEAVNELTAAFHEAIDHYLEDCAKAGRDPQKPASGKLML
RIRPEVHAAVGVAAAAAGKSINQWVDEVLERASHA"
misc_feature complement(199119..199448)
/locus_tag="RBRH_00337"
/note="Predicted nuclease of the RNAse H fold, HicB family
[General function prediction only]; Region: HicB;
COG4226"
/db_xref="CDD:33951"
misc_feature complement(199137..199289)
/locus_tag="RBRH_00337"
/note="HicB family; Region: HicB; pfam05534"
/db_xref="CDD:114265"
gene 199733..199834
/locus_tag="RBRH_04062"
/db_xref="GeneID:9985515"
CDS 199733..199834
/locus_tag="RBRH_04062"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027885.1"
/db_xref="GI:312794963"
/db_xref="GeneID:9985515"
/translation="MKWLDGIESTVCKTATELRGVSGAVRSVSHETY"
gene 199971..200066
/locus_tag="RBRH_00338"
/db_xref="GeneID:9988036"
CDS 199971..200066
/locus_tag="RBRH_00338"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027886.1"
/db_xref="GI:312794964"
/db_xref="GeneID:9988036"
/translation="MLLNAGEPAQPLWLNIFSLCLDIFWISKLGD"
gene 201373..202122
/locus_tag="RBRH_00340"
/db_xref="GeneID:9985516"
CDS 201373..202122
/locus_tag="RBRH_00340"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027887.1"
/db_xref="GI:312794965"
/db_xref="GeneID:9985516"
/translation="MNKYNKLLAAIVLAFTQYGCGGGDGDVSSSVTDAQGLYSGITSK
NQTISALILDDGSFYALYVNPSSLGVVVGNVKASDGKLSSSDIIDYDLTNAETHKTTI
SATYAPKGWLNGTLSYPGANGNSVTFTTDYDTGYEKTPTLAAIAGTYGDTSKGLNTGS
FTGVSITTDGYIAFDSGTCKAKGTIAPRTSGNVYSLTLNFDESPSCTYSGQMLSGIAG
LDGDVVIMVARASDTSHPLLFLGTQIADLEG"
gene complement(202199..202639)
/locus_tag="RBRH_00341"
/db_xref="GeneID:9985517"
CDS complement(202199..202639)
/locus_tag="RBRH_00341"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027888.1"
/db_xref="GI:312794966"
/db_xref="GeneID:9985517"
/translation="MGTSYDEDVIAWANEQAALLRAGKLSALDIEHIAEEIEDVGKSE
QRELANRMAVLLAHLLKWQYQSGRRGSSWQRTIKEQRRAIIERLGRTPSLKPVLQDAS
WQREIWADAVSKAIEETGLDVFPDACPWSMEQVLGPTFFPDQSQ"
misc_feature complement(202220..202627)
/locus_tag="RBRH_00341"
/note="Domain of unknown function DUF29; Region: DUF29;
pfam01724"
/db_xref="CDD:201936"
misc_feature complement(202848..203368)
/note="potential frameshift: common BLAST hit:
gi|295701279|ref|YP_003610280.1| transposase IS4 family
protein"
gene complement(202848..203141)
/locus_tag="RBRH_00342"
/db_xref="GeneID:9985518"
CDS complement(202848..203141)
/locus_tag="RBRH_00342"
/codon_start=1
/transl_table=11
/product="transposase"
/protein_id="YP_004027889.1"
/db_xref="GI:312794967"
/db_xref="GeneID:9985518"
/translation="MAIDGVKIYYPGLRRGVTRGLCTMIRGRSAIEPAIGHMKSDDKL
NRNWLKGALGDAIHAVLCGAGHNLRMILRKLRLFYALIRVALLNREAYMVSAA"
gene complement(203123..203368)
/locus_tag="RBRH_00343"
/db_xref="GeneID:9985519"
CDS complement(203123..203368)
/locus_tag="RBRH_00343"
/codon_start=1
/transl_table=11
/product="transposase"
/protein_id="YP_004027890.1"
/db_xref="GI:312794968"
/db_xref="GeneID:9985519"
/translation="MSRTWRRSNKGKVHKPYEFGVKVSITTTHKEGLVVGARSMPGNP
YDGHTLAQALEQAAILSEAQPQIAVVDRGYKVWPLMA"
misc_feature complement(<203138..>203341)
/locus_tag="RBRH_00343"
/note="Transposase and inactivated derivatives, IS5 family
[DNA replication, recombination, and repair]; Region:
COG3039"
/db_xref="CDD:225581"
gene complement(203652..204068)
/locus_tag="RBRH_00344"
/db_xref="GeneID:9985520"
CDS complement(203652..204068)
/locus_tag="RBRH_00344"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027891.1"
/db_xref="GI:312794969"
/db_xref="GeneID:9985520"
/translation="MDIAMAPYRLIPQQDRKAAKKPTRQHRSSCRHARCAIEGTSPFI
AFFEEITMTIVTTCGARSNLFDWIAGVLVIIGALNWGLVGLFQFDLVAAILGAGSMMT
RIIYVLVGLAGIYCLIRAFIMPKVTVSDSADIRDPK"
misc_feature complement(203706..203873)
/locus_tag="RBRH_00344"
/note="Domain of unknown function (DUF378); Region:
DUF378; pfam04070"
/db_xref="CDD:112866"
gene complement(204093..204269)
/locus_tag="RBRH_04061"
/db_xref="GeneID:9985521"
CDS complement(204093..204269)
/locus_tag="RBRH_04061"
/EC_number="6.3.2.-"
/codon_start=1
/transl_table=11
/product="Non-ribosomal peptide synthetase modules"
/protein_id="YP_004027892.1"
/db_xref="GI:312794970"
/db_xref="GeneID:9985521"
/translation="MIVVTFSSVNTLRIDFEANPACYTADKFATHQRRFVRLLKAFVA
DLVRSVIDIDLLDA"
misc_feature complement(<204096..>204242)
/locus_tag="RBRH_04061"
/note="enterobactin synthase subunit F; Provisional;
Region: entF; PRK10252"
/db_xref="CDD:182335"
gene complement(204270..204440)
/locus_tag="RBRH_04060"
/db_xref="GeneID:9988035"
CDS complement(204270..204440)
/locus_tag="RBRH_04060"
/EC_number="6.3.2.-"
/codon_start=1
/transl_table=11
/product="Non-ribosomal peptide synthetase modules"
/protein_id="YP_004027893.1"
/db_xref="GI:312794971"
/db_xref="GeneID:9988035"
/translation="MLRQRYPSEVLRRKLELMPDQSPFKSTVNVMPFDSRLSFGPYTA
TNHNLSNGPVND"
misc_feature complement(<204273..>204434)
/locus_tag="RBRH_04060"
/note="enterobactin synthase subunit F; Provisional;
Region: entF; PRK10252"
/db_xref="CDD:182335"
gene complement(204434..204589)
/locus_tag="RBRH_00345"
/db_xref="GeneID:9988034"
CDS complement(204434..204589)
/locus_tag="RBRH_00345"
/EC_number="6.3.2.-"
/codon_start=1
/transl_table=11
/product="Non-ribosomal peptide synthetase modules"
/protein_id="YP_004027894.1"
/db_xref="GI:312794972"
/db_xref="GeneID:9988034"
/translation="MSKAIRVFDRLSAHQRGQCGAEFQRSHPIVMDGFSRYLLAQRVK
HVYSALC"
misc_feature complement(<204440..204559)
/locus_tag="RBRH_00345"
/note="enterobactin synthase subunit F; Provisional;
Region: entF; PRK10252"
/db_xref="CDD:182335"
gene 204805..204999
/locus_tag="RBRH_00347"
/db_xref="GeneID:9985522"
CDS 204805..204999
/locus_tag="RBRH_00347"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027895.1"
/db_xref="GI:312794973"
/db_xref="GeneID:9985522"
/translation="MMLIAPFRFLVFHNLRHTACCACSVVWPNNHGPNEKTPCLTTLT
RAMAQKSETLMSLSDEVATC"
gene complement(205091..206530)
/locus_tag="RBRH_00348"
/db_xref="GeneID:9985523"
CDS complement(205091..206530)
/locus_tag="RBRH_00348"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027896.1"
/db_xref="GI:312794974"
/db_xref="GeneID:9985523"
/translation="MLELIIASALVKIYNRIGLSMDFNLPPASDSPQVALYAMHGQQA
GRFAAGAPPDASRLTVLSSPRVRQRSTTDSLTDATDCSANSLASNQTSCPTTYYDLPP
EILQQVAEHVPLCDMGQFSSTDRWTYNTLQEKRLSWLCCKRVHLARDLTSMHQLLGEI
ERIRAEPVLRAEPLSMLWPWILDLPKEQQPTAFQQVYEAAGRVPERGAQIQKYMFESL
CDFSPEQQCALYDFAYAAAQRWGVEQGSLWPAVASLLKSLRGDPPRFLREYRDFLGRL
PVLDAVDQADVIVELARLLPSMRRYSNDVNGTRAEYWEILLQWVERLPASHRNEPIIA
LANAIWLVPGEQRPGYYANLWRWTLSLPDHQLGRVLRYLPHALALLPPAYHAYELSQL
EPLLQRMPPAQRTQVALGLLSMVPFNTALSTQIWQRALRLLDGAYEVEVLHVLDEAGA
RVAPHLSEQQWEEAKAEILVFIERNRLSE"
gene 206677..206787
/locus_tag="RBRH_04059"
/db_xref="GeneID:9985524"
CDS 206677..206787
/locus_tag="RBRH_04059"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027897.1"
/db_xref="GI:312794975"
/db_xref="GeneID:9985524"
/translation="MTVKFSADNALLVHRARSSSTPKQYYRQYAGSMSPT"
gene 207029..208450
/locus_tag="RBRH_00350"
/db_xref="GeneID:9988033"
CDS 207029..208450
/locus_tag="RBRH_00350"
/EC_number="1.3.1.9"
/codon_start=1
/transl_table=11
/product="enoyl-[acyl-carrier protein] reductase (NADH)"
/protein_id="YP_004027898.1"
/db_xref="GI:312794976"
/db_xref="GeneID:9988033"
/translation="MVQPGLGAMPPRAMCHGVFLTKIKVCHPRLPHTAILGALPPSSR
GSTVLVQNVVCKRLRIKGRTLLPIVQGGMGVGVSAHRLAGTVASLGAVGTISSVDLRR
HHPDLMEQSRRSRDRQLIDSLNLEALRREVVAALQLASGNGLVAVNVMRAVSSYASYV
TQACESGAGAVVVGAGLPLDLPELTADFPNVALIPILSDARGIGLVLKKWMRRNRLPD
AIVIENPRYAAGHLGAPTLDGLDHPNYASQQVLEGARELFKTLGLEAENIPLIVAGGI
HRHEQVRHLLDLGASAVQLGTAFAVTEEGDAHPNFKKVLAEAKPEDIVTFMSVAGLPA
RAVRTPWLASYLEKEQKLQRAAKPRRCTVGFDCLQQCGLRDGIGKHGQFCIDMRLAHA
LSGNIERGLFFRGSETLPFGHAIRPVRELLDYLLGGATQARAGDRGCHLFGAGTTVHP
NGCPTGTPLRPSLSSVRKDQSAQ"
misc_feature 207176..208318
/locus_tag="RBRH_00350"
/note="Dioxygenases related to 2-nitropropane dioxygenase
[General function prediction only]; Region: COG2070"
/db_xref="CDD:32253"
misc_feature 207224..208051
/locus_tag="RBRH_00350"
/note="2-Nitropropane dioxygenase (NPD), one of the
nitroalkane oxidizing enzyme families, catalyzes oxidative
denitrification of nitroalkanes to their corresponding
carbonyl compounds and nitrites. NDP is a member of the
NAD(P)H-dependent flavin oxidoreductase...; Region:
NPD_like; cd04730"
/db_xref="CDD:73392"
misc_feature order(207242..207247,207476..207478,207548..207550,
207614..207616,207695..207697,207710..207715,
207845..207853,207908..207919)
/locus_tag="RBRH_00350"
/note="FMN binding site [chemical binding]; other site"
/db_xref="CDD:73392"
misc_feature order(207716..207721,208049..208051)
/locus_tag="RBRH_00350"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:73392"
misc_feature 207719..207721
/locus_tag="RBRH_00350"
/note="putative catalytic residue [active]"
/db_xref="CDD:73392"
gene complement(208733..208936)
/locus_tag="RBRH_04058"
/db_xref="GeneID:9985525"
CDS complement(208733..208936)
/locus_tag="RBRH_04058"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027899.1"
/db_xref="GI:312794977"
/db_xref="GeneID:9985525"
/translation="MPFGRHPSLSTVQRIATGGREHAAPANAIVKRIVHVSVYSQVHP
IEQRREVWNKSRIRQVAIVARMD"
gene complement(209024..209554)
/locus_tag="RBRH_00353"
/db_xref="GeneID:9988032"
CDS complement(209024..209554)
/locus_tag="RBRH_00353"
/codon_start=1
/transl_table=11
/product="cytochrome b561"
/protein_id="YP_004027900.1"
/db_xref="GI:312794978"
/db_xref="GeneID:9988032"
/translation="MPATPATDRYSKPAILLHWAIFLLVALAYVAIEVRGPKGSDSRA
FWNTIHFYSGSLVLALASLRLLWRLWHGVPAEVESTRILMFLARVVHLALYLFIFTQP
LLGILMVNAGGNPVSLPVIGLDIRLIGADPIARPLLKAMHVFIGNLFYWVIGLHALAA
IGRHVLLRDRTLRRML"
misc_feature complement(209027..209530)
/locus_tag="RBRH_00353"
/note="Cytochrome B561 [Energy production and conversion];
Region: CybB; COG3038"
/db_xref="CDD:32852"
gene 209919..210632
/locus_tag="RBRH_00354"
/db_xref="GeneID:9985526"
CDS 209919..210632
/locus_tag="RBRH_00354"
/EC_number="5.3.3.-"
/codon_start=1
/transl_table=11
/product="2-hydroxyhepta-2,4-diene-1,7-dioate isomerase"
/protein_id="YP_004027901.1"
/db_xref="GI:312794979"
/db_xref="GeneID:9985526"
/translation="MELNVAVGARIPGSVKVGTVYGVLLNFRGVLQALGDAVNQPPYQ
RPPQAPVLYIKPANTLAGDGDRVQVPHDDAGACAAAVDSLEIGASLGIVFARRTTRVK
ERDALDAVLGFTVVNDVSVPHSSLYRPAVRFNARDGFCPLGPVIVPTGHVGTPNALDI
TVRINGQVRQQANTRDAIRGVARLIEEVSAFMSFERGDVLLLGVPPHAPRAQPGDAVE
IEIERIGVLHNGFVREATT"
misc_feature 209922..210620
/locus_tag="RBRH_00354"
/note="2-keto-4-pentenoate
hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase
(catechol pathway) [Secondary metabolites biosynthesis,
transport, and catabolism]; Region: MhpD; COG0179"
/db_xref="CDD:30528"
misc_feature 209970..210605
/locus_tag="RBRH_00354"
/note="Fumarylacetoacetate (FAA) hydrolase family; Region:
FAA_hydrolase; cl11421"
/db_xref="CDD:211461"
gene 210629..211396
/locus_tag="RBRH_00355"
/db_xref="GeneID:9985527"
CDS 210629..211396
/locus_tag="RBRH_00355"
/EC_number="4.1.1.68"
/codon_start=1
/transl_table=11
/product="5-oxopent-3-ene-1,2,5-tricarboxylate
decarboxylase"
/protein_id="YP_004027902.1"
/db_xref="GI:312794980"
/db_xref="GeneID:9985527"
/translation="MKTARVAVDGNIHFATPGAGDTVILATGRTVAADDVVWLPPIEP
RTTFALGLNYADHARELAFKAPDEPLVFLKSANTFVGHRAYTVRPADVQYMHYECELA
VVIGRRARHVPKEQAYDYVRGYMVANDYAVRDYLENYYRPNLRVKNRDTCTPLGPWLV
DRDDVPDPMNLTLRTFVNGQQTQQGNTRDMIFDIPTLIAYLSGFMTLDAGDMILTGTP
QGLADTQPGDEVVTQIDGIGRLANTIVAERHYYGCDQ"
misc_feature 210632..211369
/locus_tag="RBRH_00355"
/note="4-hydroxyphenylacetate degradation bifunctional
isomerase/decarboxylase, C-terminal subunit; Region:
HpaG-C-term; TIGR02303"
/db_xref="CDD:131356"
misc_feature 210764..211363
/locus_tag="RBRH_00355"
/note="Fumarylacetoacetate (FAA) hydrolase family; Region:
FAA_hydrolase; pfam01557"
/db_xref="CDD:201859"
gene 211433..212941
/locus_tag="RBRH_00356"
/db_xref="GeneID:9985528"
CDS 211433..212941
/locus_tag="RBRH_00356"
/EC_number="1.2.1.60"
/codon_start=1
/transl_table=11
/product="5-carboxymethyl-2-hydroxymuconic-semialdehyde
dehydrogenase"
/protein_id="YP_004027903.1"
/db_xref="GI:312794981"
/db_xref="GeneID:9985528"
/translation="MRRRMVAAAALQGGQMTIKHWIGGKQVESAQTFVTSNPATGEPI
DVVCGGGEREVALAVAAAKAAFPKWANTPAKERARLMRRLGELIEQNVPQLAQLETCD
TGLPIAQTRKQLIPRASENFNFFAEVCVQMNGRTYPVDDQMLNYTLYQPVGVCALISP
WNVPFMTATWKSAPCLALGNTAVLKMSELSPLTADQLGLLAREAGIPAGVFNVVQGYG
ASAGDALVRHPDVRAVSFTGGTATGKQIIERAGLKKFSMELGGKSPVLIFDDADLDRA
LDAALFTIFSINGERCTAGSRIFVQRTVYNDFVHKFAQRANNLIVGDPMDEQTHLGAM
ISQAHWEKVTGYIRLGEQEGATVLAGGADKPQGLPAHLRNGNFVRPTVLAHVENRMRI
AQEEIFGPVACLIPFDNEDDGLAMANDVKYGLASYIWTQDVGKVHRLARGIEAGMVFV
NSQNVRDLRQPFGGTKESGTGREGGDYSFEVFAEVKNVCISMGSHHIPKWGV"
misc_feature 211484..212935
/locus_tag="RBRH_00356"
/note="5-carboxymethyl-2-hydroxymuconate semialdehyde
dehydrogenase; Region: HpaE; TIGR02299"
/db_xref="CDD:131352"
misc_feature 211541..212902
/locus_tag="RBRH_00356"
/note="Human aldehyde dehydrogenase family 8 member
A1-like; Region: ALDH_F8_HMSADH; cd07093"
/db_xref="CDD:143412"
misc_feature order(211907..211915,211931..211933,211985..211987,
211991..211996,212084..212086,212096..212101,
212141..212149,212156..212158,212165..212167,
212204..212209,212306..212308,212618..212620,
212624..212626,212816..212818)
/locus_tag="RBRH_00356"
/note="NAD binding site [chemical binding]; other site"
/db_xref="CDD:143412"
misc_feature order(211916..211918,212204..212206,212297..212299,
212306..212308)
/locus_tag="RBRH_00356"
/note="catalytic residues [active]"
/db_xref="CDD:143412"
gene 212943..213794
/locus_tag="RBRH_00357"
/db_xref="GeneID:9985529"
CDS 212943..213794
/locus_tag="RBRH_00357"
/EC_number="1.13.11.15"
/codon_start=1
/transl_table=11
/product="3,4-dihydroxyphenylacetate 2,3-dioxygenase"
/protein_id="YP_004027904.1"
/db_xref="GI:312794982"
/db_xref="GeneID:9985529"
/translation="MGKLSLAAKITHVPSMYLSELPGKHHGCRQAAIDGHRIIGERCR
ALNVDTLIVSDVHWLVNAGYHVNCNARFQGTYTSNELPHFIKDMTYAYPGNPTLGRLI
AQTATEYGVHTRAHEVDSLGLEYGTLVPMRYMNSDQHFKVVSIAGGCAWHTLDESRRF
GQALKEAIARSDANVAFLASGSLSHRFNDNGSPEESIHDISREFFRQVDLRVVQLWKQ
GDFATFCKMLPEYNTHCRGEGGMHDTAMLLGLLGWDRYDQPVEIVTDYFASSGTGQIN
AIFPLPW"
misc_feature 212949..213785
/locus_tag="RBRH_00357"
/note="The Class III extradiol dioxygenase,
homoprotocatechuate 2,3-dioxygenase, catalyzes the key
ring cleavage step in the metabolism of
homoprotocatechuate; Region: HPCD; cd07370"
/db_xref="CDD:153382"
misc_feature order(212976..212984,213111..213113,213315..213317,
213495..213497,213660..213662,213753..213758)
/locus_tag="RBRH_00357"
/note="putative active site [active]"
/db_xref="CDD:153382"
misc_feature order(212976..212978,213111..213113)
/locus_tag="RBRH_00357"
/note="putative metal binding site [ion binding]; other
site"
/db_xref="CDD:153382"
gene 213823..214212
/locus_tag="RBRH_00358"
/db_xref="GeneID:9985530"
CDS 213823..214212
/locus_tag="RBRH_00358"
/EC_number="5.3.3.10"
/codon_start=1
/transl_table=11
/product="5-carboxymethyl-2-hydroxymuconate
delta-isomerase"
/protein_id="YP_004027905.1"
/db_xref="GI:312794983"
/db_xref="GeneID:9985530"
/translation="MPHVIVEYTANLRADARIGELLATINNTLIAQSGVFPIGGIRSR
AIALDDYRIADGSGDDAFVHVTLKIGAGRDEATKKKACDALFAAIDAHFAALFATRYL
ALSLEVVEFSEAGTYKHNNVHARYRRA"
misc_feature 213826..214167
/locus_tag="RBRH_00358"
/note="5-carboxymethyl-2-hydroxymuconate isomerase (CHMI)
is a trimeric enzyme catalyzing the isomerization of the
unsaturated ketone 5-(carboxymethyl)-2-hydroxymuconate to
5-(carboxymethyl)-2-oxo-3-hexene-1,6-dionate. This is one
step in the...; Region: CHMI; cd00580"
/db_xref="CDD:73217"
misc_feature order(213826..213828,213940..213942,213946..213948,
214030..214032,214039..214041)
/locus_tag="RBRH_00358"
/note="putative substrate binding pocket [chemical
binding]; other site"
/db_xref="CDD:73217"
misc_feature order(213829..213831,213841..213843,213889..213891,
213898..213900,213934..213939,213943..213984,
214000..214002,214012..214014,214024..214026,
214054..214059,214078..214080,214090..214092,
214126..214149,214165..214167)
/locus_tag="RBRH_00358"
/note="trimer interface [polypeptide binding]; other site"
/db_xref="CDD:73217"
gene 214070..215044
/locus_tag="RBRH_00359"
/db_xref="GeneID:9985531"
CDS 214070..215044
/locus_tag="RBRH_00359"
/EC_number="4.2.-.-"
/codon_start=1
/transl_table=11
/product="2-oxo-hepta-3-ene-1,7-dioic acid hydratase"
/protein_id="YP_004027906.1"
/db_xref="GI:312794984"
/db_xref="GeneID:9985531"
/translation="MRCSRRSTPILLRCSPRAIWRCRWRWSNSAKPAPISITTSMRGT
AVRELDLLLNPGRRMEETLIEHIATQLDEAERSRTPIRQISLEYPQITVEDAYAIQRT
WVAKKLARGRMVKGHKIGLTSKAMQYSSQIDEPDYGTLLDDMFFGEGSSVPIDRFIVP
RVEVELAFVLGKRLSGPACTLFDVYDAVDYVIPALEIIDARSHAIDPDTKRPRKVYDT
IADNAANAGVVLGGRPVKPCDVDLRWVAAIMSRNGTIEETGVAAGVLNHPANGVAWLA
NKLHPFDVALEPGHVVLAGSFTRPCLACKGDTFNVDYGPLGAISCYFG"
misc_feature 214244..215041
/locus_tag="RBRH_00359"
/note="2-oxo-hepta-3-ene-1,7-dioic acid hydratase; Region:
HpaH; TIGR02312"
/db_xref="CDD:131365"
gene 215208..215933
/locus_tag="RBRH_00360"
/db_xref="GeneID:9985532"
CDS 215208..215933
/locus_tag="RBRH_00360"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027907.1"
/db_xref="GI:312794985"
/db_xref="GeneID:9985532"
/translation="MRASMAVVGALSVAVAACDGSQVSPTVIAGPYSGTWNEQSARIL
VLDDGRFYVRYMKADIPSALAGVVAGTIASIDGKVAQGSGIDYNYGEPGVTALTWSGM
YAAGQTIAAKASYADGRTAQLNARYDSHWARATLVAATGSFCGVGMTHRGTQVDFDAV
RFTVDAKGEIAGLAQQCQFSGTLAPRVSSNVYDATLNFDGGAGCAYPNTPASGFAMMR
DTQLEIFVQTPDKSSILLVMEKQ"
gene 216237..216560
/locus_tag="RBRH_00361"
/db_xref="GeneID:9985533"
CDS 216237..216560
/locus_tag="RBRH_00361"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S21"
/protein_id="YP_004027908.1"
/db_xref="GI:312794986"
/db_xref="GeneID:9985533"
/translation="MVSIGPLRVDASLRKRGVGSGDARRQGDERIELARDNMTTIVIK
ENEPFEVAIRRFRRTIERNGLIAELRERQSYEKPTAVRKRKKAAAVKRLQRRLRSQQL
PKKLH"
misc_feature 216348..>216473
/locus_tag="RBRH_00361"
/note="30S ribosomal protein S21; Reviewed; Region: rpsU;
PRK00270"
/db_xref="CDD:178952"
gene 216610..216810
/locus_tag="RBRH_04057"
/db_xref="GeneID:9985534"
CDS 216610..216810
/locus_tag="RBRH_04057"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027909.1"
/db_xref="GI:312794987"
/db_xref="GeneID:9985534"
/translation="MSTGHGPFVVWASMMWGPRCGGLALPMAKYVGAEVRARLVPPAG
DSVDGALHLASMAVAQSSSVPR"
gene 216823..217824
/locus_tag="RBRH_00362"
/db_xref="GeneID:9988031"
CDS 216823..217824
/locus_tag="RBRH_00362"
/codon_start=1
/transl_table=11
/product="hydrolase"
/protein_id="YP_004027910.1"
/db_xref="GI:312794988"
/db_xref="GeneID:9988031"
/translation="MVCFSAFRARLARAPCVHGRIAPACFALSDLSMYQVIATDLDGT
LLDSDHQVDPFTVATLQELQAHGLHFVIATGRHFRDVAGIRDRLGIRPYLVTSNGARV
HDARDNRLHAHDLPPDIVKQLVAPHIAGTHGRVIVNLFVDDAWLIDREAPQLLAFHQD
SGFRYEVANLATHDGQGVAKVLYIGDAADLGVVERNLAWHFGDALYVTYSLPDCLEVM
AASVSKGRALAFVLEQLGLPAERCIAFGDNMNDIDMLESVGHPFMMGNANPGLIARLP
HVPRIGNNFEAGVAHHLRALFAPQREYQGLRTGKTWSDCGKPPKWIAGKNRERFLIP"
misc_feature 216919..217713
/locus_tag="RBRH_00362"
/note="putative hydrolase; Provisional; Region: PRK10976"
/db_xref="CDD:182878"
misc_feature 216928..>217185
/locus_tag="RBRH_00362"
/note="Haloacid dehalogenase-like hydrolases. The haloacid
dehalogenase-like (HAD) superfamily includes L-2-haloacid
dehalogenase, epoxide hydrolase, phosphoserine
phosphatase, phosphomannomutase, phosphoglycolate
phosphatase, P-type ATPase, and many others; Region:
HAD_like; cd01427"
/db_xref="CDD:119389"
misc_feature order(216940..216948,217042..217047)
/locus_tag="RBRH_00362"
/note="active site"
/db_xref="CDD:119389"
misc_feature 216940..216957
/locus_tag="RBRH_00362"
/note="motif I; other site"
/db_xref="CDD:119389"
misc_feature 217042..217044
/locus_tag="RBRH_00362"
/note="motif II; other site"
/db_xref="CDD:119389"
misc_feature 217270..217599
/locus_tag="RBRH_00362"
/note="Haloacid dehalogenase-like hydrolases. The haloacid
dehalogenase-like (HAD) superfamily includes L-2-haloacid
dehalogenase, epoxide hydrolase, phosphoserine
phosphatase, phosphomannomutase, phosphoglycolate
phosphatase, P-type ATPase, and many others; Region:
HAD_like; cd01427"
/db_xref="CDD:119389"
gene complement(217844..218908)
/locus_tag="RBRH_00363"
/db_xref="GeneID:9985535"
CDS complement(217844..218908)
/locus_tag="RBRH_00363"
/EC_number="2.4.1.-"
/codon_start=1
/transl_table=11
/product="glycosyltransferase"
/protein_id="YP_004027911.1"
/db_xref="GI:312794989"
/db_xref="GeneID:9985535"
/translation="MRIAQIAPLHEAVPPKLYGGTERVVSYLTEGLVELGHDVTLFAS
GDSRTSARLEAAWPRALRLDPSIRDWMAPHILMLEQVRRVAHEFDILHFHLDYLPFPL
FSQIDTPFVTTLHGRLDLPELQPIFDSFPQAHVISISDSQRGPLPRAGWVDTIHHGLP
ESLLVPQTDIKPTYLAFLGRICPEKRVDHAIRIAAQAGLPLKIAAKVDKVDREYFKSE
IEPLLSLGDVEFIGEINEAQKPAFLSGAKALLFPIDWCEPFGLVMIESMACGTPVIAF
NRGSVPEVVEHGVTGFICEDVDGAVTALSQVEALSRKQIRARFEQRFTARIMAQHYVD
AYASLARGARQPMLRKVATG"
misc_feature complement(217901..218908)
/locus_tag="RBRH_00363"
/note="This family is most closely related to the GT1
family of glycosyltransferases. aviGT4 in Streptomyces
viridochromogenes has been shown to be involved in
biosynthesis of oligosaccharide antibiotic avilamycin A.
Inactivation of aviGT4 resulted in a mutant...; Region:
GT1_AviGT4_like; cd03802"
/db_xref="CDD:99975"
misc_feature complement(217883..218893)
/locus_tag="RBRH_00363"
/note="Glycosyltransferase [Cell envelope biogenesis,
outer membrane]; Region: RfaG; COG0438"
/db_xref="CDD:30787"
misc_feature complement(order(218123..218125,218192..218194,
218369..218377,218849..218851))
/locus_tag="RBRH_00363"
/note="putative ADP-binding pocket [chemical binding];
other site"
/db_xref="CDD:99975"
gene complement(219566..220336)
/locus_tag="RBRH_00365"
/db_xref="GeneID:9985536"
CDS complement(219566..220336)
/locus_tag="RBRH_00365"
/EC_number="1.18.1.2"
/codon_start=1
/transl_table=11
/product="ferredoxin--NADP reductase"
/protein_id="YP_004027912.1"
/db_xref="GI:312794990"
/db_xref="GeneID:9985536"
/translation="MSNLTQQTVLSVHHWTDTLFSFTCTRDPGFRFDNGQFTMVGLEV
DGKPLLRAYSLASANYEENLEFLSIKVQDGPLTSRLQHLKVGDSIYIGKKPTGTLVVD
NLLPGKTLWLLSTGTGLAPFMSVIKDPDVYDRYEKIVLTHTCRFVDELAYKEYITEHL
PQHEHIGELIRDKLMYFPTVTREPFQNRGRITALIETGELFERLGVPAFSVNNDRIML
CGSPHMLRDTRQLLDGMGFTEGSNSAPGHYVVEKAFVG"
misc_feature complement(219575..220336)
/locus_tag="RBRH_00365"
/note="Flavodoxin reductases (ferredoxin-NADPH reductases)
family 1 [Energy production and conversion]; Region: Hmp;
COG1018"
/db_xref="CDD:31221"
misc_feature complement(219578..220315)
/locus_tag="RBRH_00365"
/note="Ferredoxin-NADP+ (oxido)reductase is an
FAD-containing enzyme that catalyzes the reversible
electron transfer between NADP(H) and electron carrier
proteins such as ferredoxin and flavodoxin. Isoforms of
these flavoproteins (i.e. having a non-covalently...;
Region: FNR1; cd06195"
/db_xref="CDD:99792"
misc_feature complement(order(219578..219580,219986..219988,
220106..220111,220115..220117,220124..220126,
220130..220132,220136..220138,220175..220186,
220226..220228))
/locus_tag="RBRH_00365"
/note="FAD binding pocket [chemical binding]; other site"
/db_xref="CDD:99792"
misc_feature complement(order(220175..220180,220184..220186))
/locus_tag="RBRH_00365"
/note="FAD binding motif [chemical binding]; other site"
/db_xref="CDD:99792"
misc_feature complement(order(220046..220048,220052..220054,
220079..220081,220097..220099,220106..220108,
220115..220117))
/locus_tag="RBRH_00365"
/note="phosphate binding motif [ion binding]; other site"
/db_xref="CDD:99792"
misc_feature complement(order(219974..219976,219980..219991,
220001..220003))
/locus_tag="RBRH_00365"
/note="beta-alpha-beta structure motif; other site"
/db_xref="CDD:99792"
misc_feature complement(order(219674..219679,219902..219910,
219983..219988))
/locus_tag="RBRH_00365"
/note="NAD binding pocket [chemical binding]; other site"
/db_xref="CDD:99792"
gene complement(220528..221088)
/locus_tag="RBRH_00366"
/db_xref="GeneID:9985537"
CDS complement(220528..221088)
/locus_tag="RBRH_00366"
/EC_number="3.1.-.-"
/codon_start=1
/transl_table=11
/product="endonuclease"
/protein_id="YP_004027913.1"
/db_xref="GI:312794991"
/db_xref="GeneID:9985537"
/translation="MPTDIRLKLPPMKKLFYAFVVLVCATSFVDAAPVRLDKATVDTY
FSPNGGAGEAVAALIGGAKRRVWLAGYAFTSPEIAKALRNARVRGVQVRVVLDKSNET
GKYSGATYLSNAGIDVRIDSQYPIMHHKFIVVDDLVAFGSMNFTRAGDRKNAENFNVF
RGAPALTSAYAAEFDRLYAESKPYRR"
misc_feature complement(220549..220971)
/locus_tag="RBRH_00366"
/note="Catalytic domain of EDTA-resistant nuclease Nuc
from Salmonella typhimurium and similar proteins; Region:
PLDc_Nuc; cd09170"
/db_xref="CDD:197267"
misc_feature complement(220558..220926)
/locus_tag="RBRH_00366"
/note="PLD-like domain; Region: PLDc_2; pfam13091"
/db_xref="CDD:205272"
misc_feature complement(order(220624..220626,220657..220659,
220663..220665,220699..220701,220705..220707))
/locus_tag="RBRH_00366"
/note="putative active site [active]"
/db_xref="CDD:197267"
misc_feature complement(220705..220707)
/locus_tag="RBRH_00366"
/note="catalytic site [active]"
/db_xref="CDD:197267"
gene 221098..222294
/locus_tag="RBRH_00367"
/db_xref="GeneID:9985538"
CDS 221098..222294
/locus_tag="RBRH_00367"
/EC_number="2.3.1.81"
/codon_start=1
/transl_table=11
/product="aminoglycoside N3'-acetyltransferase"
/protein_id="YP_004027914.1"
/db_xref="GI:312794992"
/db_xref="GeneID:9985538"
/translation="MRNSLSRRDAEVESRTSMAQWNWHGSARRHEPKTDLAMARAISD
AQVSRQDKIVVLLDGQPQEPSMKRPFFRGCRRAFTSSVFKGALALPLGALMSQARAQS
RPNAHEYLSQQPVLQDAPRLTDAVMTEHNLILKTPAPRTRSSLARQLAEGGVTAGSTI
LVHSSLSSLGWVAGAAVAVIQALMDCIGPNGTLVMPTHTAHLTDPAEWEAPPVPSNWV
ETLREEMPAYDPATTPTRNMGAVAELFRTWPGARRSLHPTCSFAAIGPRADQITADHA
LESPLGERSPLAKLYDADACVLLLGVDFDVCTLLHLAEQRAWPNRPKTREGSPILENG
VRRWAVYEAPALLDSEHFLPVGRAMKDRGAVKTFSVGNARSMLFSGREAVDFAIHTWK
GQLPPG"
misc_feature 221578..222261
/locus_tag="RBRH_00367"
/note="Aminoglycoside 3-N-acetyltransferase; Region:
Antibiotic_NAT; pfam02522"
/db_xref="CDD:145586"
gene complement(222365..223270)
/locus_tag="RBRH_01969"
/db_xref="GeneID:9985539"
CDS complement(222365..223270)
/locus_tag="RBRH_01969"
/codon_start=1
/transl_table=11
/product="endonuclease/Exonuclease/phosphatase"
/protein_id="YP_004027915.1"
/db_xref="GI:312794993"
/db_xref="GeneID:9985539"
/translation="MARNSSIAYRRASWTSERVMNSREDGRAMRPDDTLPSVPCTGDK
EFIAVSWNLHKGRSPLGLQAWQSMQRWMQATPADVYFLQEAMARRMPAPVLASNGFGE
PLQGALTDVWQCQATEIAQALRLQLTLGPNVFKPSWRHGNAILSPHPLDLGGRWDISA
HRFEKRGLLVARATLYNTPVTLLCVHLALTRQSRLRQMHWIAHWIAREAATGPLVLAG
DFNDWKNDSEPLFAEIGLREVASTLGEAGKTFPAFSPALALDKMFVRGVTPVQWLEPA
PRTAWLSDHLPYMARLRLDYLEAAG"
misc_feature complement(222386..223135)
/locus_tag="RBRH_01969"
/note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
superfamily; Region: EEP; cl00490"
/db_xref="CDD:207076"
misc_feature complement(order(222608..222610,222713..222715))
/locus_tag="RBRH_01969"
/note="putative phosphate binding site [ion binding];
other site"
/db_xref="CDD:197306"
misc_feature complement(order(222416..222421,222491..222493,
222608..222610,222614..222616))
/locus_tag="RBRH_01969"
/note="putative catalytic site [active]"
/db_xref="CDD:197306"
misc_feature complement(order(222416..222418,222608..222610))
/locus_tag="RBRH_01969"
/note="putative phosphate binding site [ion binding];
other site"
/db_xref="CDD:197306"
misc_feature complement(222419..222421)
/locus_tag="RBRH_01969"
/note="putative metal binding site [ion binding]; other
site"
/db_xref="CDD:197306"
gene complement(223221..223802)
/locus_tag="RBRH_01968"
/db_xref="GeneID:9986437"
CDS complement(223221..223802)
/locus_tag="RBRH_01968"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027916.1"
/db_xref="GI:312794994"
/db_xref="GeneID:9986437"
/translation="MTVSRMQNLGAVRSMNPSWRSRSESLMTSLLNALRPLATGVLLA
SAAAMAYAQDGPPKVRWDVEVVQDGRSVDHFGATTTVGQAKSQTHKRSVVHESGCQNQ
LVTNIKLSRTLTVSPTHVDGDKAVLSLDVQEIFEDPRAAQSADGCALPPQPRRVTAVH
PGLVVPPGQTVSWKLVDHGPQLIYRVQASIVDQ"
gene 224025..224921
/locus_tag="RBRH_01967"
/db_xref="GeneID:9986436"
CDS 224025..224921
/locus_tag="RBRH_01967"
/EC_number="3.4.21.53"
/codon_start=1
/transl_table=11
/product="ATP-dependent endopeptidase Lon"
/protein_id="YP_004027917.1"
/db_xref="GI:312794995"
/db_xref="GeneID:9986436"
/translation="MHDLSDGASEALRSTYEKMLKVGALRFCVKPNRLPSIDALLDES
PNFNEPLEDVRKQIALVAETDDRLELMPMLLLGEPGIGKTHFARQLARLVGTGYHYVA
MSSLTAGWILSGASSQWKNAKPGKVFDALVNGAYANPLVLVDEIDKAGGDAQYDPLGA
LYALLEHDTAQSFIDEFAEVPIDASSVLWVATANDVHRIPEPILNRMNVYEIPAPDRD
GARRIAQSIYSEIRESHAWGARFPPALEEAPLDVLSTLSPRAMRRAIVHGFGNARLAG
RNAVSAHDVVLDRHAHRRSIGF"
misc_feature 224187..224648
/locus_tag="RBRH_01967"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature 224253..224276
/locus_tag="RBRH_01967"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature order(224256..224279,224454..224456,224604..224606)
/locus_tag="RBRH_01967"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature order(224445..224453,224454..224459)
/locus_tag="RBRH_01967"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature 224640..224642
/locus_tag="RBRH_01967"
/note="arginine finger; other site"
/db_xref="CDD:99707"
gene complement(224951..225169)
/locus_tag="RBRH_01966"
/db_xref="GeneID:9986435"
CDS complement(224951..225169)
/locus_tag="RBRH_01966"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027918.1"
/db_xref="GI:312794996"
/db_xref="GeneID:9986435"
/translation="MTPEAGLSMFRWLLTTFIATAILSASWPWLARLGIGRLPGDFTL
SWRDRRLPLPFMSTLLLTLLGSLLVRLL"
misc_feature complement(<225038..225145)
/locus_tag="RBRH_01966"
/note="Protein of unknown function (DUF2905); Region:
DUF2905; pfam11146"
/db_xref="CDD:204596"
gene complement(225166..226356)
/locus_tag="RBRH_01965"
/db_xref="GeneID:9986434"
CDS complement(225166..226356)
/locus_tag="RBRH_01965"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027919.1"
/db_xref="GI:312794997"
/db_xref="GeneID:9986434"
/translation="MKPNTTQPNSLPVPGDTALAHLRALVQHIAKQICAAGGWLPFDR
YMELALYTPGLGYYSGGSVKFGRGPDDGSDFITAPELSPLFAQTFAKPVADVLGATGT
RHVVEFGAGTGKFAAGLLRTLHALGVGCTRYTIVELSGELRARQRECIAQTAPQFASC
VEWIDALPERVDGVIVGNEVLDAMPVRLFARQDGCWHERGVTLADASRFVFADRPLAA
TAVPATLACVPGRHDYVTETHEAAAAFVHTVCSALGRGAALFVDYGFPAAEYYHPQRT
EGTLMCHYRHRAHGDPFLYPGLQDITAHVQFSAIGQAARDAGAHLLGYTSQARFLMNA
GITDSLAQLDPADPARFLPAANAVQKLLSEAEMGELFKVIAFCRGFDGALDAFERGDR
SHML"
misc_feature complement(225184..226284)
/locus_tag="RBRH_01965"
/note="Uncharacterized conserved protein [Function
unknown]; Region: COG1565"
/db_xref="CDD:31753"
misc_feature complement(225382..226095)
/locus_tag="RBRH_01965"
/note="Putative S-adenosyl-L-methionine-dependent
methyltransferase; Region: Methyltransf_28; pfam02636"
/db_xref="CDD:202326"
gene 226370..227203
/locus_tag="RBRH_01964"
/db_xref="GeneID:9986433"
CDS 226370..227203
/locus_tag="RBRH_01964"
/EC_number="1.1.1.100"
/codon_start=1
/transl_table=11
/product="3-oxoacyl-ACP reductase"
/protein_id="YP_004027920.1"
/db_xref="GI:312794998"
/db_xref="GeneID:9986433"
/translation="MSDPSCAGQHPASPSCAPPARRAALVTGAARRIGRALALGMAAR
GWDIALHYHTSEADAQSLVADIQALGRRAVALRADLADEAQVRRLVPDSIAALGRIEC
VVNNASLFDEDTAATFGYGKLLNMTAINVGAPLTLARALHESMPEAARDDETLRGSVI
NVLDQKLYNMNPDYLSYTLTKAALQAATVALAQALAPKLRVVAVAPGLTLRSGSQTDE
SFVDAHRRTPLGRASTPADVVEAVCYLADARGVTGATLLVDGGQHLVPSPRDVMFMTG
A"
misc_feature 226442..227197
/locus_tag="RBRH_01964"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:213117"
misc_feature order(226523..226531,226685..226693,226853..226861,
226898..226900,226910..226912,226985..226996)
/locus_tag="RBRH_01964"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:187535"
misc_feature order(226757..226759,226859..226861,226898..226900,
226910..226912)
/locus_tag="RBRH_01964"
/note="active site"
/db_xref="CDD:187535"
gene 227196..227675
/locus_tag="RBRH_01963"
/db_xref="GeneID:9986432"
CDS 227196..227675
/locus_tag="RBRH_01963"
/EC_number="4.1.2.25"
/codon_start=1
/transl_table=11
/product="dihydroneopterin aldolase"
/protein_id="YP_004027921.1"
/db_xref="GI:312794999"
/db_xref="GeneID:9986432"
/translation="MRERDACVPTAGPSRVARPLPPLLTGSPMLSALSHPSLADCRRL
FLRNYELYINIGVHDFEKRAEQRVIVNIDLFVPLAESTPRADKLAEVVDYDFMRSTIA
QRVSRGHVHLQETFCDDVAAAMLAHPKVRAVRVSTEKPDVYSDCESVGVEVIRIKEA"
misc_feature 227325..227660
/locus_tag="RBRH_01963"
/note="Dihydroneopterin aldolase; Region: FolB;
smart00905"
/db_xref="CDD:197973"
misc_feature order(227391..227393,227397..227399,227604..227606,
227652..227654)
/locus_tag="RBRH_01963"
/note="active site"
/db_xref="CDD:29764"
gene 227677..228600
/locus_tag="RBRH_01962"
/db_xref="GeneID:9986431"
CDS 227677..228600
/locus_tag="RBRH_01962"
/codon_start=1
/transl_table=11
/product="tRNA s2C32 biosynthesis protein TtcA"
/protein_id="YP_004027922.1"
/db_xref="GI:312795000"
/db_xref="GeneID:9986431"
/translation="MHAPETGVRVLTRREQKQAYENNKLFKRLARQTGQAIADYNMIE
AGDKVMVCVSGGKDSYALLDILLRLRERAPIDFDIVAVNLDQKQPGFPAHVLPEYLAA
RGVPFHVENQDTYSIVKRLVPEGKTTCSLCSRLRRGILYRVAGELGATKIALGHHRDD
ILQTVLLNMFYGGKLKGMPPKLQSDDGKHIVIRPLAYVKEHDLEKYAQLREFPIIPCN
LCGSQPNLKRAEMKMLLQEWDKRFPGRVDNMFSALADVVPSHLMDHRLFPFAELRATG
VADPHGDIAFDDEPCAMPDSGTVPIVPLDAL"
misc_feature 227728..228501
/locus_tag="RBRH_01962"
/note="tRNA 2-thiocytidine biosynthesis protein TtcA;
Provisional; Region: PRK10696"
/db_xref="CDD:182655"
misc_feature 227818..228345
/locus_tag="RBRH_01962"
/note="This is a subfamily of Adenine nucleotide alpha
hydrolases superfamily.Adeninosine nucleotide alpha
hydrolases superfamily includes N type ATP PPases and ATP
sulphurylases. It forms a apha/beta/apha fold which binds
to Adenosine group. This subfamily; Region:
Alpha_ANH_like_II; cd01993"
/db_xref="CDD:30180"
misc_feature order(227830..227838,227842..227853,227923..227925,
227929..227931)
/locus_tag="RBRH_01962"
/note="Ligand Binding Site [chemical binding]; other site"
/db_xref="CDD:30180"
gene 228548..230059
/locus_tag="RBRH_01961"
/db_xref="GeneID:9986430"
CDS 228548..230059
/locus_tag="RBRH_01961"
/EC_number="2.3.1.157"
/EC_number="2.7.7.23"
/codon_start=1
/transl_table=11
/product="glucosamine-1-phosphate acetyltransferase /
UDP-N-acetylglucosamine pyrophosphorylase"
/protein_id="YP_004027923.1"
/db_xref="GI:312795001"
/db_xref="GeneID:9986430"
/translation="MPCPTAAPCRSCHWTRCEAATLARYVWVARRNAVSPMLKSALQD
SLDVDAVNIVILAAGMGKRMHSARPKVLHSLAGRPLLSHVIDTARALAPSRLVVVVGH
GAQAVREAVAAPDIQFALQAEQRGTGHAVQQALPFIDPALPTLVLYGDVPLTRASTLR
RLADAAANGRYGVLTVTLDDPHGYGRIVRDGAGRITRIIEQKDAAPWQREIREVNTGI
VISPSGRLDAWLSALTNDNAQREFYLTDVVERAIEDGVEVVGVQPDDVWETLGVNSKR
QLADLERVYQRNEALRLLDAGVTVTDPSRIDVRGTLACGTEVSIDVNCVFEGQVVLGD
HVSIGPNCVIREATIAAGTRVDAFTHVDGAHVGENVVLGPYARLRPGAVLSSDAHVGN
FVEVKNAVLGQGAKANHLSYIGDADVGARVNIGAGTITCNYDGAHKHRTLIGDDVFVG
SDTQLVAPVVVGSGSTIAAGTTVWRDVPAGALVLNEKTQVAKPGYARPTKKKA"
misc_feature 228698..230050
/locus_tag="RBRH_01961"
/note="UDP-N-acetylglucosamine
diphosphorylase/glucosamine-1-phosphate
N-acetyltransferase; Region: glmU; TIGR01173"
/db_xref="CDD:162235"
misc_feature 228704..229381
/locus_tag="RBRH_01961"
/note="N-terminal domain of bacterial GlmU; Region:
GT2_GlmU_N_bac; cd02540"
/db_xref="CDD:133020"
misc_feature order(228713..228721,228842..228844,228926..228928,
228935..228937,228989..228991,228995..228997)
/locus_tag="RBRH_01961"
/note="Substrate binding site; other site"
/db_xref="CDD:133020"
misc_feature order(228995..228997,229364..229366)
/locus_tag="RBRH_01961"
/note="Mg++ binding site; other site"
/db_xref="CDD:133020"
misc_feature 229436..230014
/locus_tag="RBRH_01961"
/note="N-acetyl-glucosamine-1-phosphate uridyltransferase
(GlmU), C-terminal left-handed beta-helix (LbH)
acetyltransferase domain: GlmU is also known as
UDP-N-acetylglucosamine pyrophosphorylase. It is a
bifunctional bacterial enzyme that catalyzes two...;
Region: LbH_GlmU_C; cd03353"
/db_xref="CDD:100044"
misc_feature order(229682..229684,229730..229732,229736..229738,
229772..229774,229781..229783,229814..229825,
229838..229846,229859..229861,229889..229891,
229895..229900,229949..229954,230003..230005)
/locus_tag="RBRH_01961"
/note="active site"
/db_xref="CDD:100044"
misc_feature order(229682..229684,229730..229732,229736..229738,
229772..229774,229781..229783,229814..229822,
229841..229843,229859..229861)
/locus_tag="RBRH_01961"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:100044"
misc_feature order(229823..229825,229838..229840,229844..229846,
229895..229900,229949..229954,230003..230005)
/locus_tag="RBRH_01961"
/note="CoA binding site [chemical binding]; other site"
/db_xref="CDD:100044"
gene 230120..231937
/locus_tag="RBRH_01960"
/db_xref="GeneID:9986429"
CDS 230120..231937
/locus_tag="RBRH_01960"
/EC_number="2.6.1.16"
/codon_start=1
/transl_table=11
/product="glucosamine--fructose-6-phosphate
aminotransferase"
/protein_id="YP_004027924.1"
/db_xref="GI:312795002"
/db_xref="GeneID:9986429"
/translation="MCGIVGAVAQRNIVPILVEGLRRLEYRGYDSCGVAAIVDGTARR
ARSVSRVTDLDQQIRDTQLAGETGIAHTRWATHGAPVTHNAHPIFSHDTIALVHNGII
ENYETLREGLRANGYEFVTQTDTEVIAHLIYSLYRGDLFAAVREAVKQLHGAYAIAVF
SKDQPHRVCGARAGSPLVVGLGQQENFLASDALALAGSTDRFIFLEEGDVVELTLDGV
RIADRDGGLVQREIRTVNAYGGAVELGPYRHFMQKEIFEQPRAISDTMAQTDAFDPEL
FGAGAGDVFHGIDSLLILACGTSYYSGLTAKYWLESIAKIPTQVEIASEYRYRDSVPN
PRSLVVVISQSGETADTLAALKHAQALGHAHTLAICNVASSAMVRLTALRLLTHAGTE
IGVASTKAFTTQLVALFVLAVTLGRLRGHVDASLQAHYLKQLRHLPAALNSVLALEPQ
IIAWAEEFSRKENALFLGRGMHYPIALEGALKLKEISYIHAEAYPAGELKHGPLALVT
EAMPVVTVAPNDALLEKLKSNIQEVRARGGQLYVFADADTRIVNDEGLHVIRMPEHYG
LLSPILHVVPLQLLAYHTACARGTDVDKPRNLAKSVTVE"
misc_feature 230120..231934
/locus_tag="RBRH_01960"
/note="glucosamine--fructose-6-phosphate aminotransferase;
Reviewed; Region: PRK00331"
/db_xref="CDD:178980"
misc_feature 230123..230758
/locus_tag="RBRH_01960"
/note="Glutamine amidotransferases class-II
(Gn-AT)_GFAT-type. This domain is found at the N-terminus
of glucosamine-6P synthase (GlmS, or GFAT in humans). The
glutaminase domain catalyzes amide nitrogen transfer from
glutamine to the appropriate substrate. In...; Region:
GFAT; cd00714"
/db_xref="CDD:48478"
misc_feature order(230123..230125,230198..230200,230336..230341,
230345..230350,230375..230377,230414..230419,
230489..230494)
/locus_tag="RBRH_01960"
/note="glutaminase active site [active]"
/db_xref="CDD:48478"
misc_feature 230990..231367
/locus_tag="RBRH_01960"
/note="SIS (Sugar ISomerase) domain repeat 1 found in
Glucosamine 6-phosphate synthase (GlmS) and
Glucosamine-6-phosphate deaminase (GlmD). The SIS domain
is found in many phosphosugar isomerases and phosphosugar
binding proteins. GlmS contains a N-terminal...; Region:
SIS_GlmS_GlmD_1; cd05008"
/db_xref="CDD:88405"
misc_feature order(231005..231010,231038..231043,231050..231055,
231074..231076,231080..231082,231092..231094,
231101..231103,231167..231169)
/locus_tag="RBRH_01960"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:88405"
misc_feature order(231011..231016,231146..231154)
/locus_tag="RBRH_01960"
/note="active site"
/db_xref="CDD:88405"
misc_feature 231464..231928
/locus_tag="RBRH_01960"
/note="SIS (Sugar ISomerase) domain repeat 2 found in
Glucosamine 6-phosphate synthase (GlmS) and
Glucosamine-6-phosphate deaminase (GlmD). The SIS domain
is found in many phosphosugar isomerases and phosphosugar
binding proteins. GlmS contains a N-terminal...; Region:
SIS_GlmS_GlmD_2; cd05009"
/db_xref="CDD:88406"
misc_feature order(231527..231529,231569..231571,231581..231583,
231587..231589,231593..231595,231599..231601,
231611..231613,231617..231625,231629..231640,
231689..231694,231704..231706,231710..231715,
231905..231910,231923..231925)
/locus_tag="RBRH_01960"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:88406"
misc_feature order(231563..231565,231572..231574)
/locus_tag="RBRH_01960"
/note="active site"
/db_xref="CDD:88406"
gene 231957..232157
/locus_tag="RBRH_01959"
/db_xref="GeneID:9986428"
CDS 231957..232157
/locus_tag="RBRH_01959"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027925.1"
/db_xref="GI:312795003"
/db_xref="GeneID:9986428"
/translation="MPARRVPHAPDRSPLRCMAQVDPWLKNGEYRATAGLSRFYPATR
ADVYRADRWLLPEPSGMGEQHR"
gene 232311..232451
/locus_tag="RBRH_04056"
/db_xref="GeneID:9986427"
CDS 232311..232451
/locus_tag="RBRH_04056"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027926.1"
/db_xref="GI:312795004"
/db_xref="GeneID:9986427"
/translation="MTQATAVWATAVWATAVWVAAAWIVATQVARSVGLPQFIRLKGA
LL"
gene 232438..233142
/locus_tag="RBRH_01958"
/db_xref="GeneID:9988030"
CDS 232438..233142
/locus_tag="RBRH_01958"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027927.1"
/db_xref="GI:312795005"
/db_xref="GeneID:9988030"
/translation="MRCCSANQTAVLGFAHCRRFRWCRIWTENGARATSCAIWCAQET
KENQIGKTMNALIEDSSRGPAILPVALRAATREEYGYFFHLYRNALSGYFRQTLGWED
DFRRAAFRVSYPIARCQAIVVDGVSRAAGVLSTQVCEDGGVEVALLLVDPACQRRGIG
ATLLHRVCDAAHREGRAVKLQTFKLNERAARFYLRQGFQIVTEDEYYLHFRRVPCGAD
PTVAAPLSACVDAPSR"
misc_feature 232822..232962
/locus_tag="RBRH_01958"
/note="N-Acyltransferase superfamily: Various enzymes that
characteristically catalyze the transfer of an acyl group
to a substrate; Region: NAT_SF; cd04301"
/db_xref="CDD:173926"
misc_feature order(232879..232887,232915..232920)
/locus_tag="RBRH_01958"
/note="Coenzyme A binding pocket [chemical binding]; other
site"
/db_xref="CDD:173926"
misc_feature <232885..233061
/locus_tag="RBRH_01958"
/note="Acetyltransferases [General function prediction
only]; Region: RimI; COG0456"
/db_xref="CDD:30804"
gene complement(233200..234231)
/locus_tag="RBRH_01957"
/db_xref="GeneID:9986426"
CDS complement(233200..234231)
/locus_tag="RBRH_01957"
/EC_number="1.1.1.1"
/codon_start=1
/transl_table=11
/product="Alcohol dehydrogenase"
/protein_id="YP_004027928.1"
/db_xref="GI:312795006"
/db_xref="GeneID:9986426"
/translation="MAMKQSMKAAVVHAFGEPLRIEEVAVPTPGPAQILVNVKASGVC
HTDLHAADGDWPVKPTLPFIPGHEGVGYVAAVGKGVKIAKEGDRVGVPWLYTACGHCE
YCLGGWETLCHVQQNTGYSVNGGYAEYVLADPNYVGRLPDQVAFDEIAPILCAGVTVY
KGIRVTDTRPGQWLAISGIGGLGHVAVQYANAMGLHVVAVDVVPDKLELAKRLGAKLV
VDASATDPAAFIQKEIGGVHGVLVTAVSRSAFAQALGMVRRGGTVSLNGLPPGDFPLP
IFSTVLNAITVRGSIVGTRRDLQEALDFAAQGLVHAHIHHERLENINLVFGKLREGKV
DGRIVLTLD"
misc_feature complement(233203..234219)
/locus_tag="RBRH_01957"
/note="Zn-dependent alcohol dehydrogenases [General
function prediction only]; Region: AdhP; COG1064"
/db_xref="CDD:31264"
misc_feature complement(233206..234213)
/locus_tag="RBRH_01957"
/note="Cinnamyl alcohol dehydrogenases (CAD); Region:
CAD3; cd08297"
/db_xref="CDD:176257"
misc_feature complement(order(233221..233223,233356..233364,
233428..233436,233485..233487,233494..233505,
233614..233616,233629..233634,233686..233688,
233689..233694,233698..233700,233758..233760,
233770..233772,234085..234087,234094..234102))
/locus_tag="RBRH_01957"
/note="NAD binding site [chemical binding]; other site"
/db_xref="CDD:176257"
misc_feature complement(order(233356..233358,233428..233430,
233770..233772,233953..233955,234031..234033,
234067..234069,234094..234096,234100..234102))
/locus_tag="RBRH_01957"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:176257"
misc_feature complement(order(233770..233772,234031..234033,
234100..234102))
/locus_tag="RBRH_01957"
/note="catalytic Zn binding site [ion binding]; other
site"
/db_xref="CDD:176257"
misc_feature complement(order(233311..233313,233320..233322,
233332..233334,233344..233349,233359..233385,
233398..233403,233428..233433,233437..233439,
233452..233454,233458..233460,233482..233484,
233596..233601,233608..233610,233644..233646,
233650..233658,233719..233727,233893..233901,
233923..233928,233932..233934,234067..234069))
/locus_tag="RBRH_01957"
/note="tetramer interface [polypeptide binding]; other
site"
/db_xref="CDD:176257"
misc_feature complement(order(233896..233898,233920..233922,
233929..233931,233938..233940))
/locus_tag="RBRH_01957"
/note="structural Zn binding site [ion binding]; other
site"
/db_xref="CDD:176257"
gene complement(234300..234554)
/locus_tag="RBRH_01956"
/db_xref="GeneID:9986425"
CDS complement(234300..234554)
/locus_tag="RBRH_01956"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027929.1"
/db_xref="GI:312795007"
/db_xref="GeneID:9986425"
/translation="MDECRYCGKFRDEWDCHGQQCRRAIAKALRRQRAGLPMVPNTIR
NEIPAGATTQQVITVLSRQRLRARRGNEVRRECKEIDELS"
gene 234498..234674
/locus_tag="RBRH_01955"
/db_xref="GeneID:9986424"
CDS 234498..234674
/locus_tag="RBRH_01955"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027930.1"
/db_xref="GI:312795008"
/db_xref="GeneID:9986424"
/translation="MAMAIPFVAKFSAVTAFIHINSLPPNRPMEIAALVPPRFASAHA
AQIAISCLSLPGCL"
gene 234799..237030
/locus_tag="RBRH_01954"
/db_xref="GeneID:9986423"
CDS 234799..237030
/locus_tag="RBRH_01954"
/codon_start=1
/transl_table=11
/product="ABC transporter ATP-binding protein"
/protein_id="YP_004027931.1"
/db_xref="GI:312795009"
/db_xref="GeneID:9986423"
/translation="MTSSTFASAARSSGLRARIATDLWHAIWRHRGRVLGAVSLLLLA
KAAAVAVPLLLKDIVDALGNVTSRPAAIPILLLFGYAVVRFASNALSEVRDMTFVQVT
QRTVADYTARTFGHLHHLGARFHSQRETGSVVRDLEKGTAGIGYLLGVAVFTIVPTFI
EIASVLAIVISKYGGGFTLIIFATFAVYASYTVVFTQRRMRVQRRMNALEAQANSRIV
DSLLNYDTVKYFAREDFERKRLDQVMQQWQEAGIENQYALSTLHIGQSACIGAGIAAV
MLLAGQHVVSGAMTVGDLVLINAYIIQVSLPLNTLGFVFREANDALTNVERLFALLDA
RDKAGEDGDAAAAQPLVVRGGEIRFEHVDFSYEPSRRILWDVSFRIEPGQTVAVVGGS
GSGKSTLARLLFRLYQPDAGSITIDGQDLRLVTQRSLRAALGIVPQDTILFNDTIAYN
IGYGREDATKADIIAAARGAQLDEFIERLPDAYDTRVGERGVRLSGGERQRVAIARAL
LKQPPIVVFDEATSALDTRSERAIQQELMRVAEHRTSLIIAHRLSTVVDADRILVMEH
GRLVEQGTHTSLLEKGGVYAQMWALQAQQRELERTEQRFALLPINVGALVDNVLDALQ
EVAVRHQASLFKRITDDNLIVTGDAATLRRFIWQLCRTGIEAGGAGSRIEVSVARHDN
DARVSICTPDLETPELFMVGSGVTPGRARGAAWVYLAQPRRCRIHDPHHVAAAGHRGV
AHR"
misc_feature 234985..235722
/locus_tag="RBRH_01954"
/note="ABC transporter transmembrane region; Region:
ABC_membrane; pfam00664"
/db_xref="CDD:201380"
misc_feature 235078..236565
/locus_tag="RBRH_01954"
/note="ABC-type transport system involved in Fe-S cluster
assembly, permease and ATPase components
[Posttranslational modification, protein turnover,
chaperones]; Region: ATM1; COG5265"
/db_xref="CDD:34862"
misc_feature 235867..236574
/locus_tag="RBRH_01954"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:213113"
misc_feature 235966..235989
/locus_tag="RBRH_01954"
/note="Walker A/P-loop; other site"
/db_xref="CDD:72971"
misc_feature order(235975..235980,235984..235992,236110..236112,
236350..236355,236446..236448)
/locus_tag="RBRH_01954"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:72971"
misc_feature 236101..236112
/locus_tag="RBRH_01954"
/note="Q-loop/lid; other site"
/db_xref="CDD:72971"
misc_feature 236278..236307
/locus_tag="RBRH_01954"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:72971"
misc_feature 236338..236355
/locus_tag="RBRH_01954"
/note="Walker B; other site"
/db_xref="CDD:72971"
misc_feature 236362..236373
/locus_tag="RBRH_01954"
/note="D-loop; other site"
/db_xref="CDD:72971"
misc_feature 236434..236454
/locus_tag="RBRH_01954"
/note="H-loop/switch region; other site"
/db_xref="CDD:72971"
gene 237486..238013
/locus_tag="RBRH_01953"
/db_xref="GeneID:9986422"
CDS 237486..238013
/locus_tag="RBRH_01953"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027932.1"
/db_xref="GI:312795010"
/db_xref="GeneID:9986422"
/translation="MSLTTPSTPENLSAPRRTGSLYADRSAASAAIEMLLPTLSAALH
NTVVGQSGCLHIVVMDPALGPGDASFEDAILYEHSMPDPAQWDADYRAYARAKARLSW
EHGMDSQLVQSSQPHRLRRGDTNLWGSVAQHGIVVGVSGAQPWFDEALAGCVAHCLRA
IARHRAEAAAGTLAL"
gene 238240..238989
/locus_tag="RBRH_01952"
/db_xref="GeneID:9986421"
CDS 238240..238989
/locus_tag="RBRH_01952"
/EC_number="1.1.1.100"
/codon_start=1
/transl_table=11
/product="3-oxoacyl-ACP reductase"
/protein_id="YP_004027933.1"
/db_xref="GI:312795011"
/db_xref="GeneID:9986421"
/translation="MAQTADLSNPILTGKTALITGGARGLGAAICDELARAGMNIVVA
DLHEEQARETAAELGRHGVKVVWQRIDVSDEASVQQAMHTIHESVGELDVVVNNAAID
VTAAIEEVEVAAWQRVLMTNLFGPYLICRAVVPMMKARGDGHIVNIASTASKRAWPNA
SAYHATKWGLLGFSHALHAELRPAGVRVSSIVAGGMRTPFLLDRFPDIDVDTLQPPQN
VAAAVRFVLTQPPGTVIPEVMVLPMKETSWP"
misc_feature 238267..238914
/locus_tag="RBRH_01952"
/note="3-ketoacyl-(acyl-carrier-protein) reductase;
Validated; Region: fabG; PRK05653"
/db_xref="CDD:180183"
misc_feature 238288..238962
/locus_tag="RBRH_01952"
/note="classical (c) SDRs; Region: SDR_c; cd05233"
/db_xref="CDD:212491"
misc_feature order(238300..238302,238306..238317,238372..238380,
238447..238455,238531..238539,238600..238602,
238681..238689,238726..238728,238738..238740,
238816..238827,238831..238836)
/locus_tag="RBRH_01952"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:212491"
misc_feature order(238603..238605,238687..238689,238726..238728,
238738..238740)
/locus_tag="RBRH_01952"
/note="active site"
/db_xref="CDD:212491"
gene 238980..239597
/locus_tag="RBRH_01951"
/db_xref="GeneID:9986420"
CDS 238980..239597
/locus_tag="RBRH_01951"
/EC_number="3.1.3.-"
/codon_start=1
/transl_table=11
/product="D-glycero-D-manno-heptose-1,7-bisphosphate
7-phosphatase"
/protein_id="YP_004027934.1"
/db_xref="GI:312795012"
/db_xref="GeneID:9986420"
/translation="MAVTGAGRGAVLLDKDGTLLKNVPYNVDPARMVLAPGAAQALRR
LGALGMPLAVVSNQPGVALGCFPEVALCAVRERLCALFREHGAVLAGFFYCPHHPKGA
VAHYAIECDCRKPRSALLTQALAFLDATPQYSWMVGDILDDIEAGRGAGCRTILVDCG
NETEWRRSPQREPDFVVERLDAAAHIIAAQRNDTPAERIGQEAAI"
misc_feature 239007..239552
/locus_tag="RBRH_01951"
/note="Histidinol phosphatase and related phosphatases
[Amino acid transport and metabolism]; Region: HisB;
COG0241"
/db_xref="CDD:30590"
misc_feature 239007..239450
/locus_tag="RBRH_01951"
/note="Haloacid dehalogenase-like hydrolases. The haloacid
dehalogenase-like (HAD) superfamily includes L-2-haloacid
dehalogenase, epoxide hydrolase, phosphoserine
phosphatase, phosphomannomutase, phosphoglycolate
phosphatase, P-type ATPase, and many others; Region:
HAD_like; cd01427"
/db_xref="CDD:119389"
misc_feature order(239019..239027,239145..239150)
/locus_tag="RBRH_01951"
/note="active site"
/db_xref="CDD:119389"
misc_feature 239019..239036
/locus_tag="RBRH_01951"
/note="motif I; other site"
/db_xref="CDD:119389"
misc_feature 239145..239147
/locus_tag="RBRH_01951"
/note="motif II; other site"
/db_xref="CDD:119389"
gene 239594..240784
/locus_tag="RBRH_01950"
/db_xref="GeneID:9986419"
CDS 239594..240784
/locus_tag="RBRH_01950"
/EC_number="2.-.-.-"
/codon_start=1
/transl_table=11
/product="ADP-heptose--LPS heptosyltransferase"
/protein_id="YP_004027935.1"
/db_xref="GI:312795013"
/db_xref="GeneID:9986419"
/translation="MSTGWSNARRILCVRLDNMGDVLMTTPALRALKGDDGRRHLTLL
TSSVGAALDGHLPMVDQVWGYDAPWVKHPNASPDAAPDLAMIERLAAGRFDAAVIFTV
YSQSPLPAAMMCWLAGIPLRLAHCRENPYRLLTDRVAETEPHQRVRHEVVRQLELVRS
IGATTTHWQMEFAYSEQDRWSLQRRLQAVRHQQGAPFAQPGHGHWLVVHPGASAPSRR
WPAERFGEVAAQLAPQFDAVAVTGSAAESELVDAVCARAGKRAVPLAGQLSLGEMGAL
VGTADLLITNNSGPAHLAAAVGTPVVDLYALTNPQHTPWRVPHRVLSVDVPCKYCYRS
ECSEPGHPCLTGVGVDEVVAAARSLLAGHDAAQAERWATCRWQLGSPSPANVIPIATA
IARA"
misc_feature 239618..240676
/locus_tag="RBRH_01950"
/note="ADP-heptose:LPS heptosyltransferase [Cell envelope
biogenesis, outer membrane]; Region: RfaF; COG0859"
/db_xref="CDD:31200"
misc_feature 239621..>240007
/locus_tag="RBRH_01950"
/note="Glycosyltransferases catalyze the transfer of sugar
moieties from activated donor molecules to specific
acceptor molecules, forming glycosidic bonds. The acceptor
molecule can be a lipid, a protein, a heterocyclic
compound, or another carbohydrate...; Region:
Glycosyltransferase_GTB_type; cl10013"
/db_xref="CDD:212618"
misc_feature <240128..240667
/locus_tag="RBRH_01950"
/note="Lipopolysaccharide heptosyltransferase is involved
in the biosynthesis of lipooligosaccharide (LOS).
Lipopolysaccharide (LPS) is a major component of the outer
membrane of gram-negative bacteria. LPS
heptosyltransferase transfers heptose molecules from...;
Region: GT1_LPS_heptosyltransferase; cd03789"
/db_xref="CDD:99964"
misc_feature order(240215..240220,240314..240316,240410..240415,
240449..240451,240458..240463,240470..240472)
/locus_tag="RBRH_01950"
/note="putative active site [active]"
/db_xref="CDD:99964"
gene 240712..242541
/locus_tag="RBRH_01949"
/db_xref="GeneID:9986418"
CDS 240712..242541
/locus_tag="RBRH_01949"
/EC_number="2.1.3.-"
/codon_start=1
/transl_table=11
/product="Nodulation protein nolNO"
/protein_id="YP_004027936.1"
/db_xref="GI:312795014"
/db_xref="GeneID:9986418"
/translation="MSLAAGQPVPCQRNSNRNRDSESLTMPDTRTPLYTLGINAAFHD
SAACLVRDGVVVAAAEEERFTHIKHGKRPVPFSTWELPYHAIDYCLSEAGIVLRDVHH
VAYSYDPWLQIDRGQQEPVFTLPLSPSAHRKASGHVSPWDPLFLSYIVNAPRQLADGV
PHHLSKRWRGVTPDGPFEWHFVEHHLSHEASAFLAAPFQRCAVLTMDGRGEKATTSYG
VFDGHQYRRIKQVNLPNSLGLLYERVTRYLGFLHSSDEYKVMALASFGKPAYMDAMRR
LVRYVDNGDYEVESIDLVSLFGPARERGGPLEQRHYDIAHSLQAMLEEVVLRMVEWLA
HTTGEKQLAMAGGVALNCVMNAKVRDSGYFDDVWVQPAAGDAGTALGAALWTDFQQRG
VRDGKAMDHAYLGPAYDEATIQALLDEAQLPYRRLDDVAAETAALLAKNRIIGWFQGR
MEFGPRALGARSILASPIDPGMQQRLNRIKDREDFRPVAPAVLEEKAHEWFTARKPGR
LHAPFMLFVCDVAPGREEAIPAVRHVDGTARVQTVNADQNPLYHRLLTAFNRLTGVPV
LVNTSFNTRGKPVVCSPRDALECFWTSPLDALVIGPFLLEKRR"
misc_feature 240808..242535
/locus_tag="RBRH_01949"
/note="Predicted carbamoyl transferase, NodU family
[Posttranslational modification, protein turnover,
chaperones]; Region: COG2192"
/db_xref="CDD:32375"
misc_feature 241279..242334
/locus_tag="RBRH_01949"
/note="Carbamoyltransferase; Region: CmcH_NodU; pfam02543"
/db_xref="CDD:111443"
gene 242475..243545
/locus_tag="RBRH_01948"
/db_xref="GeneID:9986417"
CDS 242475..243545
/locus_tag="RBRH_01948"
/EC_number="2.4.-.-"
/codon_start=1
/transl_table=11
/product="glycosyltransferase family protein"
/protein_id="YP_004027937.1"
/db_xref="GI:312795015"
/db_xref="GeneID:9986417"
/translation="MLLDLAARCAGDRPISVGETPMTDAPDTASRIRVSVVVPTYRRP
DLLSRCLDALCAQVFDPSTFEILVVDDDRARHSAKDVVHAFAQRSDGRPRVRYIPAWR
TRGPAGARNAGWCSAQGAIIAFTDDDTIADPMWLRQGCDALMRDPMACAVAGRIEVPL
GDAPTDYERDASGLAHAEFATANCFVRRDALVQVGGFDERFTRAWREDADLMFMLREQ
VGPIIDAPQARVLHPIRPAHWGVSIGQQSKVFFDALLYKKHRRVYRQHIRRVPPWHYY
IAVAALLLAAVLLGTGQRVAGSVALGIWAAVTLWFCWRRLRGTSRAASHIAEMIVTSM
AIPPVSLYWRLRGALHFKVLFL"
misc_feature 242571..243209
/locus_tag="RBRH_01948"
/note="Glycosyltransferase like family 2; Region:
Glyco_tranf_2_3; pfam13641"
/db_xref="CDD:205818"
misc_feature 242580..243170
/locus_tag="RBRH_01948"
/note="Glycosyltransferase family A (GT-A) includes
diverse families of glycosyl transferases with a common
GT-A type structural fold; Region: Glyco_tranf_GTA_type;
cl11394"
/db_xref="CDD:212311"
misc_feature order(242589..242591,242595..242597,242679..242681,
242850..242852,242856..242858)
/locus_tag="RBRH_01948"
/note="active site"
/db_xref="CDD:132997"
gene 243500..244657
/locus_tag="RBRH_01947"
/db_xref="GeneID:9986416"
CDS 243500..244657
/locus_tag="RBRH_01947"
/EC_number="2.-.-.-"
/codon_start=1
/transl_table=11
/product="ADP-heptose--LPS heptosyltransferase"
/protein_id="YP_004027938.1"
/db_xref="GI:312795016"
/db_xref="GeneID:9986416"
/translation="MAAARRASLQGAFSMTPDTVEPAGEARREPAGHASIAVFRALQL
GDMLCAVPALRALRRGEPHARITLIGLPWAEQFAQRFAEYIDDFLPFPGAPGLAEQPA
DAARLAAFFEQCRARRFDLAIQLHGSGTHTNRIVAQLGAAQTAGFMPAPGDGAAGGTA
HPLDKTIPWPESVPEIIRYTRLTQALGYGDWGEHLAFPLTRLDHAACRALCEQHELPS
QQFAVFHPGARMPSRRWPAQRFASVANWLSQRGIRIVVTGTASEATLADELAHRLDVP
CVNLCGRTSLGVMAALIGRSKVLVCNDTGVSHIAAALRTPSVVIACGSDVARWAPLDR
ERHHVLANYPPCRPCMFDVCPYQHACATAIDVRDVTHQLEQMFESEAYNAA"
misc_feature 243602..244621
/locus_tag="RBRH_01947"
/note="ADP-heptose:LPS heptosyltransferase [Cell envelope
biogenesis, outer membrane]; Region: RfaF; COG0859"
/db_xref="CDD:31200"
misc_feature 243602..>243883
/locus_tag="RBRH_01947"
/note="Glycosyltransferases catalyze the transfer of sugar
moieties from activated donor molecules to specific
acceptor molecules, forming glycosidic bonds. The acceptor
molecule can be a lipid, a protein, a heterocyclic
compound, or another carbohydrate...; Region:
Glycosyltransferase_GTB_type; cl10013"
/db_xref="CDD:212618"
misc_feature <244160..244624
/locus_tag="RBRH_01947"
/note="Lipopolysaccharide heptosyltransferase is involved
in the biosynthesis of lipooligosaccharide (LOS).
Lipopolysaccharide (LPS) is a major component of the outer
membrane of gram-negative bacteria. LPS
heptosyltransferase transfers heptose molecules from...;
Region: GT1_LPS_heptosyltransferase; cd03789"
/db_xref="CDD:99964"
misc_feature order(244169..244174,244268..244270,244364..244369,
244403..244405,244412..244417,244424..244426)
/locus_tag="RBRH_01947"
/note="putative active site [active]"
/db_xref="CDD:99964"
gene 244512..245597
/locus_tag="RBRH_01946"
/db_xref="GeneID:9986415"
CDS 244512..245597
/locus_tag="RBRH_01946"
/codon_start=1
/transl_table=11
/product="lipopolysaccharide
N-acetylglucosaminyltransferase"
/protein_id="YP_004027939.1"
/db_xref="GI:312795017"
/db_xref="GeneID:9986415"
/translation="MYWLTIHHAGRACSTSVRTSTHARQRSTYGMLRINSSKCSNRRL
TMPHKRLRVLTWHVHGNYLYYLSQTPHDFYVVTKPGSPPGYGGCAGNLPWGPNMHEVP
YDQVHAASFDCVLYQHHKHYVEDRQHALSEAQRQLPALFVEHDPPREHPTDTLHPVQD
PNVLLVHVTPFNALMWDNGVTPTRVIEHGVLLPDGVAYRGTLAKGVTVVNHLRKRGRR
LGADVFEAVREAVPLDLVGMGSTELGGIGEIPNLALPGFVADYRFFFNPIRYTSLGLA
VVEAMMLGSPIIALATTEMAQVVRSGHNGVADTRPAVLVDTMHHLLKDPVLARQWGDA
ARRDAQERFNIARFTADWDRALRDVAT"
misc_feature <245247..245588
/locus_tag="RBRH_01946"
/note="Glycosyltransferase [Cell envelope biogenesis,
outer membrane]; Region: RfaG; COG0438"
/db_xref="CDD:30787"
misc_feature <245316..245582
/locus_tag="RBRH_01946"
/note="Glycosyltransferases catalyze the transfer of sugar
moieties from activated donor molecules to specific
acceptor molecules, forming glycosidic bonds. The acceptor
molecule can be a lipid, a protein, a heterocyclic
compound, or another carbohydrate...; Region:
Glycosyltransferase_GTB_type; cl10013"
/db_xref="CDD:212618"
gene complement(245627..246562)
/locus_tag="RBRH_01945"
/db_xref="GeneID:9986414"
CDS complement(245627..246562)
/locus_tag="RBRH_01945"
/EC_number="2.4.-.-"
/codon_start=1
/transl_table=11
/product="glycosyltransferase family protein"
/protein_id="YP_004027940.1"
/db_xref="GI:312795018"
/db_xref="GeneID:9986414"
/translation="MLLAVAACSCGIVSASMDSPHPENRITVIVLTYRRRDELARTLT
HLTALPERVPIIVVDNDSRDGTAQWVAQRFAHVTLIQAPGNLGAAGRNLGAAAARTRY
IAFCDDDTWWEPGSLSLAADLLDAYPQVVSLTARVLVGPQRCEDPVCELMRTSPIVPP
CALPGPPILGLLAGATAFRTDAFLAAGGYHPRLFIGGEEAVLALDLASAGWSLVYVPQ
LTVCHYPSPVRDAGRRRSLLARNAVWAAWLRLPAGAALQRTLQLAPRVWREGGGVTGW
WQTLRGLRWVFSERRVIPPHVDQMRRCVEAAAARE"
misc_feature complement(245657..246490)
/locus_tag="RBRH_01945"
/note="Predicted glycosyltransferases [General function
prediction only]; Region: COG1216"
/db_xref="CDD:31409"
misc_feature complement(245891..246481)
/locus_tag="RBRH_01945"
/note="Glycosyltransferase family A (GT-A) includes
diverse families of glycosyl transferases with a common
GT-A type structural fold; Region: Glyco_tranf_GTA_type;
cl11394"
/db_xref="CDD:212311"
misc_feature complement(order(246236..246238,246242..246244,
246389..246391,246464..246466,246470..246472))
/locus_tag="RBRH_01945"
/note="active site"
/db_xref="CDD:132997"
gene complement(246523..247215)
/locus_tag="RBRH_01944"
/db_xref="GeneID:9986413"
CDS complement(246523..247215)
/locus_tag="RBRH_01944"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027941.1"
/db_xref="GI:312795019"
/db_xref="GeneID:9986413"
/translation="MTERWLVISPHLDDAVFGCGRLLAQAPGSIVATVFAGIPPRAMP
APPWDRDAGFDSAQEAMQARRVEDRHALSILRAEPHWLDFLDDQYECAVPDEALLDAL
RSLLDAHAQRGVLAPAGLFHRDHLRVQRAMLALLGEQPTTRRWFFYEEALYRRKEGLM
EQRLAHWKAQGWTAQPAALVDEDASDGSARAKAQAVRAYRSQVALFRPDTLLDLERAE
CYWRLQRVPAAS"
misc_feature complement(<246946..247200)
/locus_tag="RBRH_01944"
/note="GlcNAc-PI de-N-acetylase; Region: PIG-L; pfam02585"
/db_xref="CDD:202295"
gene complement(247212..248273)
/locus_tag="RBRH_01943"
/db_xref="GeneID:9986412"
CDS complement(247212..248273)
/locus_tag="RBRH_01943"
/EC_number="4.2.1.46"
/codon_start=1
/transl_table=11
/product="dTDP-glucose 4,6-dehydratase"
/protein_id="YP_004027942.1"
/db_xref="GI:312795020"
/db_xref="GeneID:9986412"
/translation="MKEYGRKRILVTGGAGFLGSHLCERLVTAGHDVLCVDNFYTGTK
DNIAHLLDAPNFEMMRHDVTFPLYVEVDEIYNLACPASPVHYQQDPVQTTKTSVHGAI
NLLGLAKRVKARILQASTSEVYGDPSMHPQREQYWGNVNPIGVRSCYDEGKRCAETLF
ADYYRQHRVDIRIARIFNTYGPRMHPADGRVVSNFITQALAGEALTVYGDGTQTRSFC
YVDDLVDGLIRLMEAPSPFAEPVNLGNAAEVTIGEIAREVIRVTGARVPVRYAPLPAD
DPRQRCPDLTLAARRLGWSPTTTLADGLTRTVRYFVQRAALRVYRPHGGTPAEAGCAI
SDAHAHSAQAGEPAQQARA"
misc_feature complement(247323..248255)
/locus_tag="RBRH_01943"
/note="Nucleoside-diphosphate-sugar epimerases [Cell
envelope biogenesis, outer membrane / Carbohydrate
transport and metabolism]; Region: WcaG; COG0451"
/db_xref="CDD:30800"
misc_feature complement(247341..248255)
/locus_tag="RBRH_01943"
/note="UDP-glucuronate decarboxylase (UGD) and related
proteins, extended (e) SDRs; Region: UGD_SDR_e; cd05230"
/db_xref="CDD:187541"
misc_feature complement(order(247704..247706,247737..247748,
247815..247817,247827..247829,247914..247922,
247986..247988,248031..248045,248085..248093,
248148..248165,248220..248231,248235..248237))
/locus_tag="RBRH_01943"
/note="NAD binding site [chemical binding]; other site"
/db_xref="CDD:187541"
misc_feature complement(order(247785..247787,247944..247949,
247953..247958,247965..247970,248073..248078))
/locus_tag="RBRH_01943"
/note="putative substrate binding site 2 [chemical
binding]; other site"
/db_xref="CDD:187541"
misc_feature complement(order(247431..247433,247443..247445,
247521..247523,247629..247631,247635..247637,
247650..247658,247689..247694,247701..247709,
247740..247742,247836..247838,248025..248027))
/locus_tag="RBRH_01943"
/note="putative substrate binding site 1 [chemical
binding]; other site"
/db_xref="CDD:187541"
misc_feature complement(order(247815..247817,247827..247829,
247914..247916,247983..247985))
/locus_tag="RBRH_01943"
/note="active site"
/db_xref="CDD:187541"
gene complement(248273..249601)
/locus_tag="RBRH_01942"
/db_xref="GeneID:9986411"
CDS complement(248273..249601)
/locus_tag="RBRH_01942"
/EC_number="2.4.1.-"
/codon_start=1
/transl_table=11
/product="glycosyltransferase"
/protein_id="YP_004027943.1"
/db_xref="GI:312795021"
/db_xref="GeneID:9986411"
/translation="MKKIALISEHASPLGVIGGVDSGGQNIYVANVAKQLALRGWHVD
VFTRRDNPHLPEVMRIGPRMQVIHVPAGPPNDMPKEALLPYMACFADFLVDYFSRQPE
PYDVMHANFFMSGEAALHVKQQLGVPLVTTFHALGRVRRQHQGMADAFPNERFAIEDT
LVQRSDRVIAECPQDQIDLTTLYPGDPRRIRVIPCGFDSDEFQPVPKLEARARLGWRS
DEFAILQLGRLVPRKGVDNVIEALAHLPAHSAQPTRLYVVGGNDYTPDPERCPELARL
IHVAQQAGVAEHVTFVGRRDRDVLQLFYSAADVFVTTPWYEPFGITPVEAMACATPVI
GSNVGGIRSTVVDGVTGYLVPPREPAALARRLAALRSDPQHAVAMGLAGRRRVRRDYT
WDSVAAQLAQVYDELRDTAQRPTRAGTSLGGGRRSPIMPAAAIPNQKENG"
misc_feature complement(248396..249595)
/locus_tag="RBRH_01942"
/note="This family is most closely related to the GT1
family of glycosyltransferases. The sucrose-phosphate
synthases in this family may be unique to plants and
photosynthetic bacteria. This enzyme catalyzes the
synthesis of sucrose 6-phosphate from fructose...; Region:
GT1_Sucrose_synthase; cd03800"
/db_xref="CDD:99973"
misc_feature complement(248384..249592)
/locus_tag="RBRH_01942"
/note="D-inositol-3-phosphate glycosyltransferase; Region:
mycothiol_MshA; TIGR03449"
/db_xref="CDD:132490"
misc_feature complement(order(248636..248638,248702..248704,
248918..248926,249530..249532))
/locus_tag="RBRH_01942"
/note="putative ADP-binding pocket [chemical binding];
other site"
/db_xref="CDD:99973"
gene 249876..250205
/locus_tag="RBRH_01941"
/db_xref="GeneID:9986410"
CDS 249876..250205
/locus_tag="RBRH_01941"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027944.1"
/db_xref="GI:312795022"
/db_xref="GeneID:9986410"
/translation="MSSALKEIVMTSRHPHTGHELSHARAHEGDRVQQDHDKGGHQSG
HGKAPSPVDIQKALKGMDYPASKEDVIQCAQRSHADDSVLEMLKRIPEREYGTPASVS
KEVGKLM"
misc_feature 250047..250178
/locus_tag="RBRH_01941"
/note="Protein of unknown function (DUF2795); Region:
DUF2795; pfam11387"
/db_xref="CDD:204636"
gene complement(250320..250421)
/locus_tag="RBRH_04055"
/db_xref="GeneID:9986409"
CDS complement(250320..250421)
/locus_tag="RBRH_04055"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027945.1"
/db_xref="GI:312795023"
/db_xref="GeneID:9986409"
/translation="MLALATLLASRVAGRARWPAVSYLRRSDEVPPR"
gene complement(250574..251338)
/locus_tag="RBRH_01940"
/db_xref="GeneID:9988029"
CDS complement(250574..251338)
/locus_tag="RBRH_01940"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027946.1"
/db_xref="GI:312795024"
/db_xref="GeneID:9988029"
/translation="MKSIRTVATLTLATLMLGACGGGGKDLGTELGLSSAQARFINAV
PIGPNLDYYLNGQANATDVQYKSVTRYRDVGAGTQSATYNATGTSLTLASQAFNAAKG
HHYTTIAIQGSPSAVSVIDDPYDKGLLSDKARVRGFNASFNAPNVDIYVVAPGTDISN
VTPTVASVAYQHAVPESGQDSVYLSGGTYQVIVTHAGTKTPILRSAPVNLANNADWLI
LTIPSSGIGGVVPGNIHALVAQGNEADTSAQELTSQ"
misc_feature complement(250886..251233)
/locus_tag="RBRH_01940"
/note="Domain of unknown function (DUF4397); Region:
DUF4397; pfam14344"
/db_xref="CDD:206512"
misc_feature complement(<250694..250945)
/locus_tag="RBRH_01940"
/note="Domain of unknown function (DUF4397); Region:
DUF4397; pfam14344"
/db_xref="CDD:206512"
gene 251391..251540
/locus_tag="RBRH_01939"
/db_xref="GeneID:9986408"
CDS 251391..251540
/locus_tag="RBRH_01939"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027947.1"
/db_xref="GI:312795025"
/db_xref="GeneID:9986408"
/translation="MATVFCFTSHLYRALAWYFNNSLIVLRNGHTEGVSDKQALFPKD
AKPRG"
gene 251644..252594
/locus_tag="RBRH_01938"
/db_xref="GeneID:9986407"
CDS 251644..252594
/locus_tag="RBRH_01938"
/codon_start=1
/transl_table=11
/product="Ku protein"
/protein_id="YP_004027948.1"
/db_xref="GI:312795026"
/db_xref="GeneID:9986407"
/translation="MASRMIWKGAISFGLVHVPVQLYPATRTVKPSFRMLDKHSMDPI
GYRQVNKRTGKEVPREDIVRGYEYDKERYVVLTDEEIRAANPDSTQTVDILTFVDSKA
VSFLYVDTPYYLVPDRKGEKVYALLRDALKATGKIGIALVVMHGRQHLGALIPVGPLL
ALDTLRWKDELRALAELPLPEVDAKKAGVTARELEMAKKLIDDMSGEWKPEDYHDTFR
DDILALVEKKIRADKTRKIPSIETSAKRRTADVVDLSELLRRSLGQCKDGSSIDEDMA
SADKRKKTTTRKEPVTKAGKGGAKTATASKKTSPGKRRAA"
misc_feature 251653..252441
/locus_tag="RBRH_01938"
/note="Ku-core domain, Ku-like subfamily; composed of
prokaryotic homologs of the eukaryotic DNA binding protein
Ku. The alignment includes the core domain shared by the
prokaryotic YkoV-like proteins and the eukaryotic Ku70 and
Ku80. The prokaryotic Ku...; Region: KU_like; cd00789"
/db_xref="CDD:63881"
misc_feature 251653..252441
/locus_tag="RBRH_01938"
/note="Ku protein, prokaryotic; Region: Ku_bact;
TIGR02772"
/db_xref="CDD:163009"
misc_feature order(251656..251658,251713..251715,251740..251742,
251785..251787,252076..252078)
/locus_tag="RBRH_01938"
/note="putative DNA binding site [nucleotide binding];
other site"
/db_xref="CDD:63881"
misc_feature order(251692..251694,251713..251727,251740..251751,
251764..251766,251773..251784,251788..251796,
251812..251814,251824..251832,251836..251838,
251842..251847,251857..251862,251869..251871,
251926..251928,251932..251937,251965..251967,
252007..252009,252064..252066,252145..252150,
252160..252162,252166..252168,252253..252255,
252265..252267,252280..252288,252325..252327,
252418..252420,252427..252429)
/locus_tag="RBRH_01938"
/note="putative homodimer interface [polypeptide binding];
other site"
/db_xref="CDD:63881"
gene 252763..253482
/locus_tag="RBRH_01936"
/db_xref="GeneID:9986406"
CDS 252763..253482
/locus_tag="RBRH_01936"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027949.1"
/db_xref="GI:312795027"
/db_xref="GeneID:9986406"
/translation="MRLPIVHAIFLVLLFSSSSEIFANPEKQGHQEKQIIITGKINPG
ACEIAELAPSRISLGNLDSLHLERNMITQLEPHDVKIGIQCTAPTSIVIRSSDDIGVA
NPFATGSVLLDKATATLSERLGALRGALASNGKPVGVYAIELHDMRYADERGGGDAEP
LGRKKGMEGWEAFDNGTGDSRLLNGPYDELTWSSDGISPVNGMRFDATLKIVPYIIPT
GRLNLTDTIDFEGKSTITLTY"
misc_feature 252796..253479
/locus_tag="RBRH_01936"
/note="Protein of unknown function (DUF1120); Region:
DUF1120; cl05856"
/db_xref="CDD:195196"
gene 253484..254239
/locus_tag="RBRH_01935"
/db_xref="GeneID:9986405"
CDS 253484..254239
/locus_tag="RBRH_01935"
/codon_start=1
/transl_table=11
/product="pili assembly chaperone"
/protein_id="YP_004027950.1"
/db_xref="GI:312795028"
/db_xref="GeneID:9986405"
/translation="MHQAVLSRRNFKLNVLKYWRAAVCAIQALVCAYLGMGPHYAAAV
GVVPETSAVLIDENSGEAAIKVRNTDAHPIILHTAIIDTKEDPARLIVATPLAARLEP
GESQLVRFMLINKEPLKYERMKRVVFEGLPPELSSHNAVDLIVRQDLPVIVKPAALPV
DKEPWKRLTAQVRDGVVTLSNPSDYVVRLEQRAQILPQKTMVTLSRRYILPGEQVLVG
KARQAGAKTIRLFPMTRYGYTASAYDLQVTASH"
misc_feature 253553..254227
/locus_tag="RBRH_01935"
/note="putative fimbrial chaperone protein; Provisional;
Region: PRK09918"
/db_xref="CDD:182144"
misc_feature 253616..253960
/locus_tag="RBRH_01935"
/note="Gram-negative pili assembly chaperone, N-terminal
domain; Region: Pili_assembly_N; pfam00345"
/db_xref="CDD:201170"
gene 254259..256709
/locus_tag="RBRH_01934"
/db_xref="GeneID:9986404"
CDS 254259..256709
/locus_tag="RBRH_01934"
/codon_start=1
/transl_table=11
/product="outer membrane usher protein CssD"
/protein_id="YP_004027951.1"
/db_xref="GI:312795029"
/db_xref="GeneID:9986404"
/translation="MQHRNTATGCAWPGVRCAPAVLLCVGITSASAAAWAADTVKFDL
DRLRARGLPVELANYYERGARFDPGYNRVSLWVNGASRGEIQAYFKPDGSLCVTRELL
ERASLNVPEGLASTANASSSYGASRSSPCIDYQAAFAQTLIKLIPHASRIELIVPPQA
MRRRTRVPKQFDDGGVAGLLNYDAYLSEWRHPAGTSRNFNVRSEGGFNAYGWIVRSHQ
SLRESRRRRYVFHDRAYAQRTLPDMQKTLQMGQILVSNGVIGGIPLDGAQLTPDTALL
RTRLHAPRVEGIASSQASVVIRQAGRQIYSTLVPPGPFAIDDVELYSDMSDLTVTVIE
EDGSRREFVVPVTSLGAGATVDAPGFSLALGNFNGRTTTFPGAVLTGAGWLGPATSAA
AAAIVAHHYQAAGAALTVLPRRGPMLATRLLASRHSPASASGIRASIRMSSHLSRDFS
ASVSAGARSAGFRHLFDSRANSRRCSAMDYSVQLNYAAPYGSVGLGYGQSFAAGNTTG
RYVNGAVSMQVAGVSVGLVARCDSSRFSKARTSTYLSVSVPLGRTGARAHASLADSVL
RSGMRMNHSLGSRTHYSGSFQRDHARGDTSVDVDVSHSNRFARMSAGVLRSSRALSYS
AALSGSLAVHRDGFGFSPYRIGDTFGVVSTSGVPGVTILTRAGVVETDRTGHAILPSL
PAYAASPVEIATRSLPRNADVENGYRAVQPARGSVQKVRFNVTTVRRALLEVSTEGGS
TIQRGTPVLDDRGNMVATVLDDQQVFLPLATPDKLLTVRLADGGYCQLTYTLPDEPDP
KRTFERVPAHCIPVPTDR"
misc_feature 254376..256685
/locus_tag="RBRH_01934"
/note="putative fimbrial outer membrane usher protein;
Provisional; Region: PRK15304"
/db_xref="CDD:185204"
misc_feature 254379..254819
/locus_tag="RBRH_01934"
/note="PapC N-terminal domain; Region: PapC_N; pfam13954"
/db_xref="CDD:206124"
misc_feature 254868..>255362
/locus_tag="RBRH_01934"
/note="Type VII secretion system (T7SS), usher protein;
Region: Usher; pfam00577"
/db_xref="CDD:201318"
misc_feature <255726..256424
/locus_tag="RBRH_01934"
/note="Type VII secretion system (T7SS), usher protein;
Region: Usher; pfam00577"
/db_xref="CDD:201318"
misc_feature 256452..256649
/locus_tag="RBRH_01934"
/note="PapC C-terminal domain; Region: PapC_C; pfam13953"
/db_xref="CDD:206123"
misc_feature 257143..257851
/note="potential frameshift: common BLAST hit:
gi|116696175|ref|YP_841751.1| peroxiredoxin"
gene 257143..257424
/locus_tag="RBRH_04054"
/db_xref="GeneID:9986403"
CDS 257143..257424
/locus_tag="RBRH_04054"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027952.1"
/db_xref="GI:312795030"
/db_xref="GeneID:9986403"
/translation="MRGWLHDRAPSPRKWRPDMSIRIGDEAPDFTADTTEGQIRFHEW
IGDHWAILFSHPKDFTPVCTTELGYVARLKTRIRQAQHEGDWLVDRSGQ"
misc_feature 257209..>257364
/locus_tag="RBRH_04054"
/note="Protein Disulfide Oxidoreductases and Other
Proteins with a Thioredoxin fold; Region:
Thioredoxin_like; cl00388"
/db_xref="CDD:213097"
gene 257402..257851
/locus_tag="RBRH_01933"
/db_xref="GeneID:9988028"
CDS 257402..257851
/locus_tag="RBRH_01933"
/EC_number="1.11.1.-"
/EC_number="1.11.1.15"
/codon_start=1
/transl_table=11
/product="Peroxidase / Peroxiredoxin"
/protein_id="YP_004027953.1"
/db_xref="GI:312795031"
/db_xref="GeneID:9988028"
/translation="MSIDPVSDHKRWVGDIAETQGYPINYPLIGDENLSVAKLYDMIH
PNASAGPRNANDNATVRAVFIIGPDKKIKATFTYPMSAGRNFDEILRLLDALQLNAKH
SVATPVNWKPGDDVIIPTSVSDEEAKKKYPEGFKMLKPYLRTVAQPK"
misc_feature <257402..257836
/locus_tag="RBRH_01933"
/note="Protein Disulfide Oxidoreductases and Other
Proteins with a Thioredoxin fold; Region:
Thioredoxin_like; cl00388"
/db_xref="CDD:213097"
misc_feature <257405..257791
/locus_tag="RBRH_01933"
/note="Peroxiredoxin [Posttranslational modification,
protein turnover, chaperones]; Region: AhpC; COG0450"
/db_xref="CDD:30799"
gene 258033..258680
/locus_tag="RBRH_04053"
/db_xref="GeneID:9986402"
CDS 258033..258680
/locus_tag="RBRH_04053"
/codon_start=1
/transl_table=11
/product="transporter, lysE family"
/protein_id="YP_004027954.1"
/db_xref="GI:312795032"
/db_xref="GeneID:9986402"
/translation="MTLHTWWFFVATVFIVSAIPGPNMLLMMSSGARYGLRRSSWAMA
GCLSALVLMLSVSAAGLGVFLQAWPAMFNALRVAGAAYLMYLGIKAWRAPVESASHGA
ADTRPVERDAAHRVTRFAMFRTGFLVGASNPKALLFAAALLPQFINAAAPTWPQFSML
VPTFALIEVGWYMVYAGCGSRIGERLRSRSMAKAFNRLTGGAFVGFGALMVLVRH"
misc_feature 258033..258677
/locus_tag="RBRH_04053"
/note="Putative threonine efflux protein [Amino acid
transport and metabolism]; Region: RhtB; COG1280"
/db_xref="CDD:31471"
gene complement(259007..259954)
/locus_tag="RBRH_00370"
/db_xref="GeneID:9988027"
CDS complement(259007..259954)
/locus_tag="RBRH_00370"
/EC_number="1.2.1.38"
/codon_start=1
/transl_table=11
/product="N-acetyl-gamma-glutamyl-phosphate reductase"
/protein_id="YP_004027955.1"
/db_xref="GI:312795033"
/db_xref="GeneID:9988027"
/translation="MTTKVFVDGQDGTTGLKINEYLAARRDIEVLRIDEAKRKDPDER
RRLINASDVTFLCLPDTASRESVSLVDSDRVVIIDASTAFRTQPDWAYGLPELNRAQR
EKIRASKRIAVPGCHASAFVLAMHPLVNAGIVPAGFVATAYSITGYSGGGKKLIAAYE
DNPAPALSSPRPYALGLTHKHLPEMMVHSGLTIMPAFTPIVGAFYKGLAVTTYLPPTQ
LARRVTPADVHAVLADHYAGEAFVRVMPLGAPENLDDGFFDVQANNGTNRVDLFVFGN
EERIMTIARLDNLGKGASGAAVQCMNLAIGADERIGLTA"
misc_feature complement(259016..259954)
/locus_tag="RBRH_00370"
/note="N-acetyl-gamma-glutamyl-phosphate reductase;
Provisional; Region: PRK11863"
/db_xref="CDD:183344"
misc_feature complement(259640..259945)
/locus_tag="RBRH_00370"
/note="Semialdehyde dehydrogenase, NAD binding domain;
Region: Semialdhyde_dh; smart00859"
/db_xref="CDD:197927"
misc_feature complement(<259217..259576)
/locus_tag="RBRH_00370"
/note="Glyceraldehyde 3-phosphate dehydrogenase,
C-terminal domain; Region: Gp_dh_C; cl15856"
/db_xref="CDD:210256"
gene complement(260045..260794)
/locus_tag="RBRH_00371"
/db_xref="GeneID:9985540"
CDS complement(260045..260794)
/locus_tag="RBRH_00371"
/codon_start=1
/transl_table=11
/product="ATP/GTP binding protein"
/protein_id="YP_004027956.1"
/db_xref="GI:312795034"
/db_xref="GeneID:9985540"
/translation="MFAGAARSRSGRPAPNALCLTVRYNNVASRTGGFRPMRPRRQQH
RASRRSHVRVWQSLSMAGWLLVVQPLAQTDNAPASAMPTSAGGVSRPFELHSAALRPN
QHVPRAQVYNKRGCSGSNHSPDLSWRNAPPGTRGFAVTLFDPDAPGRGWWHWAVAGIP
ANVHRLPTNASGSGFLKSIGAIEARNDFGDDGYGGPCPPTGRAHRYIVTVWALRTQDL
RLASGRPAAVFEHEISVAALAAARIIVTYTR"
misc_feature complement(260054..260518)
/locus_tag="RBRH_00371"
/note="PhosphatidylEthanolamine-Binding Protein (PEBP)
domain present in bacteria and archaea; Region:
PEBP_bact_arch; cd00865"
/db_xref="CDD:176643"
misc_feature complement(order(260177..260179,260183..260185,
260189..260191,260198..260212,260336..260338,
260342..260344,260363..260368))
/locus_tag="RBRH_00371"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:176643"
gene complement(260932..261618)
/locus_tag="RBRH_00372"
/db_xref="GeneID:9985541"
CDS complement(260932..261618)
/locus_tag="RBRH_00372"
/EC_number="2.4.2.10"
/codon_start=1
/transl_table=11
/product="orotate phosphoribosyltransferase"
/protein_id="YP_004027957.1"
/db_xref="GI:312795035"
/db_xref="GeneID:9985541"
/translation="MIGIDRQTISDTTARILLEVQAVHFNAEKPYIFTSGWASPVYID
CRKLISYPRVRNALMDMAESTIYAGVGFEQVDSVAGGETAGIPFAAWIADRMGLPMQY
VRKKPKGFGRNAQIEGFLQEGSRVLLVEDLTTDSRSKINFINALRTAGASVEHCFVLF
HYNIFKESVSVLKDVGVDLHALATWWDVLRVAKDKGYFDTKTLDEVEKFLHAPAQWSA
AHGGATSAPQ"
misc_feature complement(261067..261405)
/locus_tag="RBRH_00372"
/note="Phosphoribosyl transferase (PRT)-type I domain;
Region: PRTases_typeI; cd06223"
/db_xref="CDD:206754"
misc_feature complement(order(261127..261129,261205..261219,
261223..261231,261367..261369,261373..261375))
/locus_tag="RBRH_00372"
/note="active site"
/db_xref="CDD:206754"
gene 261731..264109
/locus_tag="RBRH_00373"
/db_xref="GeneID:9985542"
CDS 261731..264109
/locus_tag="RBRH_00373"
/EC_number="1.1.1.40"
/codon_start=1
/transl_table=11
/product="NADP-dependent malic enzyme"
/protein_id="YP_004027958.1"
/db_xref="GI:312795036"
/db_xref="GeneID:9985542"
/translation="MCAGFVLRTCVVGRQFMGCTLIAPAISNFYLHTRRTMDEQLKQS
ALAYHQNPKPGKISVTPTKPLSNQLDLSLAYSPGVAAACEAIHAEPLDAQKYTSRGNL
VGVVTNGTAVLGLGNIGPLAAKPVMEGKGCLFKKFAGIDVFDIELAESDPDKLVEAIA
MLEPTLGGINLEDIKAPECFYIEQKLRERMKIPVFHDDQHGTAIIASAAILNGLKVVG
KHIAEVKLVASGAGAAAIACLDLLVKLGLSKDNILVADSKGVIYEGRGHLDPSKQRYA
AHTDARTLADAIKGADVFLGCSSAGVLKPEMVREMANKPLILALANPEPEIRPEEAKK
VRPDCIIATGRSDYPNQVNNVLCFPFIFRGALDVGATTITEEMKLACVRAIAELAEES
DQGDEVAKAYEGHTLEFGPEYLIPKPFDPRLIIKIAPAVAQAAMDSCVATRPIVDMQA
YREQLATTVYRTGMVMRPVFAAAKASNARIVFAEGEDERVLRAAQFVLTERIAKPIIV
GRPAVVEMRLKKMGSKLRAGQDFEIVDPEDDPRYHRCWQDYHELGARMGVTPEVAKAA
MRKSNTLIGAMLVRLGDADGMVCGLIESFHSHLKYIDQVLGRASDAQHYAAMNLLMLP
GRNLFICDTYVNEVPSAEQLADMAILAAREVEKFGIVPKIALLSNSNFGSVPTASSQR
MAQARALIAERAAHLEVDGEMHGDAALSEVIRKQAMPGTTLSGEANLLIMPNVEAANI
TYNLLKMIGGEGVTVGPFLLGTAKPVHILTPASTVRRIINMTAVASANARVG"
misc_feature 261845..264097
/locus_tag="RBRH_00373"
/note="bifunctional malic enzyme
oxidoreductase/phosphotransacetylase; Reviewed; Region:
PRK07232"
/db_xref="CDD:180898"
misc_feature 261890..262291
/locus_tag="RBRH_00373"
/note="Malic enzyme, N-terminal domain; Region: malic;
pfam00390"
/db_xref="CDD:201200"
misc_feature 262325..263035
/locus_tag="RBRH_00373"
/note="NAD(P) binding domain of malic enzyme (ME),
subgroup 2; Region: NAD_bind_2_malic_enz; cd05311"
/db_xref="CDD:133453"
misc_feature order(262421..262432,262496..262501,262619..262624,
262634..262636,262688..262696,262760..262762,
262784..262786,262790..262792)
/locus_tag="RBRH_00373"
/note="putative NAD(P) binding site [chemical binding];
other site"
/db_xref="CDD:133453"
misc_feature 263120..264085
/locus_tag="RBRH_00373"
/note="Phosphate acetyl/butaryl transferase; Region:
PTA_PTB; pfam01515"
/db_xref="CDD:201836"
gene 264225..264401
/locus_tag="RBRH_00374"
/db_xref="GeneID:9985543"
CDS 264225..264401
/locus_tag="RBRH_00374"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027959.1"
/db_xref="GI:312795037"
/db_xref="GeneID:9985543"
/translation="MQIAALLNPGALRLGLLLCVNVRLEKRSGLEGGADDDPRAHAPT
GGVCHASRPTPRRR"
gene complement(264746..265411)
/locus_tag="RBRH_00375"
/db_xref="GeneID:9985544"
CDS complement(264746..265411)
/locus_tag="RBRH_00375"
/EC_number="2.3.1.-"
/codon_start=1
/transl_table=11
/product="acetyltransferase"
/protein_id="YP_004027960.1"
/db_xref="GI:312795038"
/db_xref="GeneID:9985544"
/translation="MKALNPAPGPMTVHDPRSASPKAALVRELSSRDRAQLHAHFLSL
NDDDRLLRFGQRVPDHVVKHYVDGIDFSCDTVFGVFDDNLELVSVGHLAYVPGDSDKR
TAEFGVSVLKCARGRGIGTQLFERAAMHGRNTRVTTLYMHCLSRNSTMMHIAKKAGMK
IEYAYGEADAYLTLPPADPSSLMAELLQEQAAMFDYAMKRQARRASQLFDVFRAVPAG
LAA"
misc_feature complement(264932..265339)
/locus_tag="RBRH_00375"
/note="Acetyltransferase (GNAT) domain; Region:
Acetyltransf_3; pfam13302"
/db_xref="CDD:205482"
misc_feature complement(264986..265177)
/locus_tag="RBRH_00375"
/note="N-Acyltransferase superfamily: Various enzymes that
characteristically catalyze the transfer of an acyl group
to a substrate; Region: NAT_SF; cd04301"
/db_xref="CDD:173926"
misc_feature complement(order(265049..265054,265082..265090))
/locus_tag="RBRH_00375"
/note="Coenzyme A binding pocket [chemical binding]; other
site"
/db_xref="CDD:173926"
gene complement(265654..266268)
/locus_tag="RBRH_00376"
/db_xref="GeneID:9985545"
CDS complement(265654..266268)
/locus_tag="RBRH_00376"
/codon_start=1
/transl_table=11
/product="TetR family transcriptional regulator"
/protein_id="YP_004027961.1"
/db_xref="GI:312795039"
/db_xref="GeneID:9985545"
/translation="MARTRAPDHESQREQILNLAAEKFAQTSYPSTSMADLAAASGTS
KARLYHYYESKEAILFDLLDRYTKRLMLIIAEVEGASQRRELNEQQTFAELIRAFLAE
YETSHTRHVALLNDVKYLVQTQREIILDRQRDIVAAFARQLARAYPRRVTQSNQMALT
MMVFGMINWTFTWLKPGGKMSYADFADEVIAVLERGLVAPPHVA"
misc_feature complement(265663..266268)
/locus_tag="RBRH_00376"
/note="Transcriptional regulator [Transcription]; Region:
AcrR; COG1309"
/db_xref="CDD:31500"
misc_feature complement(266083..266223)
/locus_tag="RBRH_00376"
/note="Bacterial regulatory proteins, tetR family; Region:
TetR_N; pfam00440"
/db_xref="CDD:201228"
gene complement(266325..267113)
/locus_tag="RBRH_00377"
/db_xref="GeneID:9985546"
CDS complement(266325..267113)
/locus_tag="RBRH_00377"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027962.1"
/db_xref="GI:312795040"
/db_xref="GeneID:9985546"
/translation="MTTIHITNGDVAATSLRAALASAQRNEEVLALRDDLAFGPIRAV
DSDVHERAAFWQQVLDEQDRDVASELNEQNAALARLVESAMNIVVWHAQSASDQLMLR
RVAWYLRTQPQRLNEVALGARELPRETAPRADGASAIGMFGADALATRIRKAAPISVL
RIGRLALEWQDVRRLNGDVRCWRENRFVTGTYAPIDDAWLQHTDDRWQMATHVAARVM
KGDFGACVTDAIALWRCRELATAGRLALSGEARRQWRDVQVRRP"
misc_feature complement(266754..267104)
/locus_tag="RBRH_00377"
/note="Domain of unknown function (DUF1835); Region:
DUF1835; pfam08874"
/db_xref="CDD:192170"
misc_feature complement(266337..266675)
/locus_tag="RBRH_00377"
/note="Protein of unknown function; Region: DUF3658;
pfam12395"
/db_xref="CDD:193009"
gene 267107..267208
/locus_tag="RBRH_00378"
/db_xref="GeneID:9985547"
CDS 267107..267208
/locus_tag="RBRH_00378"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027963.1"
/db_xref="GI:312795041"
/db_xref="GeneID:9985547"
/translation="MSWRSPADGQAVSGPALRGSRHAASPLREPGYT"
gene complement(267290..268378)
/locus_tag="RBRH_00379"
/db_xref="GeneID:9985548"
CDS complement(267290..268378)
/locus_tag="RBRH_00379"
/codon_start=1
/transl_table=11
/product="phenylacetyl-CoA 2-monooxygenase electron
transfer component"
/protein_id="YP_004027964.1"
/db_xref="GI:312795042"
/db_xref="GeneID:9985548"
/translation="MATVQFHSLRIREVRAETPDAVSVAFEVPVELRDAYRFTQGQFV
TLKAHIDGEETRRSYSICVGVTDYERDGELRIGIKRVRGGRFSNFAFDTLQPGHTIDV
MTPDGRFFTHLNADHHKQYLAFAGGSGITPVLAIIKTTLDVEPRSTFTLIYGNRSVDA
IMFAEELEDLKNRYMNRLILYHVLSDDVQDVELFNGVLDRAKCDAFLQSLVPAGSIDE
AFICGPAPMMDAAEDALRAAGVPQQHIHVERFGTPLPQAGVPPVEITENTPAADLEIV
LDGKRRKLRLPYEGMSLLDVGLRAGLALPYACKGGVCCTCRAKVLDGEVRMEKNYTLE
PQEVEAGFVLTCQCHPVSERVVVSYDER"
misc_feature complement(267299..268363)
/locus_tag="RBRH_00379"
/note="phenylacetate-CoA oxygenase/reductase, PaaK
subunit; Region: PA_CoA_Oxy5; TIGR02160"
/db_xref="CDD:131215"
misc_feature complement(267626..268363)
/locus_tag="RBRH_00379"
/note="NAD(P) binding domain of ferredoxin reductase like
phenylacetic acid (PA) degradation oxidoreductase. PA
oxidoreductases of E. coli hydroxylate PA-CoA in the
second step of PA degradation. Members of this group
typically fuse a ferredoxin reductase-like...; Region:
PA_degradation_oxidoreductase_like; cd06214"
/db_xref="CDD:99810"
misc_feature complement(order(267629..267631,267635..267637,
267986..267988,267995..267997,268118..268126,
268136..268138,268142..268150,268199..268210,
268250..268252))
/locus_tag="RBRH_00379"
/note="FAD binding pocket [chemical binding]; other site"
/db_xref="CDD:99810"
misc_feature complement(order(268199..268204,268208..268210))
/locus_tag="RBRH_00379"
/note="FAD binding motif [chemical binding]; other site"
/db_xref="CDD:99810"
misc_feature complement(order(268058..268060,268064..268066,
268088..268090,268109..268111,268118..268120,
268127..268129))
/locus_tag="RBRH_00379"
/note="phosphate binding motif [ion binding]; other site"
/db_xref="CDD:99810"
misc_feature complement(order(267983..267985,267989..268000,
268010..268012))
/locus_tag="RBRH_00379"
/note="beta-alpha-beta structure motif; other site"
/db_xref="CDD:99810"
misc_feature complement(267983..268000)
/locus_tag="RBRH_00379"
/note="NAD(p) ribose binding residues [chemical binding];
other site"
/db_xref="CDD:99810"
misc_feature complement(order(267707..267712,267911..267919,
267992..267997))
/locus_tag="RBRH_00379"
/note="NAD binding pocket [chemical binding]; other site"
/db_xref="CDD:99810"
misc_feature complement(267698..267715)
/locus_tag="RBRH_00379"
/note="NAD(P)-pyrophosphate-nicotinamide binding residues
[chemical binding]; other site"
/db_xref="CDD:99810"
misc_feature complement(267311..267562)
/locus_tag="RBRH_00379"
/note="2Fe-2S iron-sulfur cluster binding domain.
Iron-sulfur proteins play an important role in electron
transfer processes and in various enzymatic reactions. The
family includes plant and algal ferredoxins, which act as
electron carriers in photosynthesis...; Region: fer2;
cd00207"
/db_xref="CDD:29262"
misc_feature complement(order(267341..267346,267431..267442,
267446..267448,267455..267457,267464..267469))
/locus_tag="RBRH_00379"
/note="catalytic loop [active]"
/db_xref="CDD:29262"
misc_feature complement(order(267341..267343,267431..267433,
267440..267442,267455..267457))
/locus_tag="RBRH_00379"
/note="iron binding site [ion binding]; other site"
/db_xref="CDD:29262"
gene complement(268380..268991)
/locus_tag="RBRH_00380"
/db_xref="GeneID:9985549"
CDS complement(268380..268991)
/locus_tag="RBRH_00380"
/codon_start=1
/transl_table=11
/product="phenylacetic acid degradation protein paaD"
/protein_id="YP_004027965.1"
/db_xref="GI:312795043"
/db_xref="GeneID:9985549"
/translation="MGAAPGPTHTSIDVRLPNSTEKRMPDSSTNTSLVARAWAALDAV
PDPEIPVVSIRELGILRDVRQAPDGVIEAVITPTYSGCPAMAQIAEDIGAALDGAGLA
PHRVVSVLAPAWTTDWITDGARQKLRHYGIAPPSRTCTTQGTQAPQPVRLVSRNEREH
TQPVCPRCGSPNTERLSQFGSTACKALYRCITCREPFDYFKPY"
misc_feature complement(268611..268895)
/locus_tag="RBRH_00380"
/note="Predicted metal-sulfur cluster biosynthetic enzyme
[General function prediction only]; Region: PaaD; COG2151"
/db_xref="CDD:32334"
misc_feature complement(268386..268862)
/locus_tag="RBRH_00380"
/note="phenylacetate-CoA oxygenase, PaaJ subunit; Region:
PA_CoA_Oxy4; TIGR02159"
/db_xref="CDD:131214"
gene complement(268996..269796)
/locus_tag="RBRH_00381"
/db_xref="GeneID:9985550"
CDS complement(268996..269796)
/locus_tag="RBRH_00381"
/codon_start=1
/transl_table=11
/product="phenylacetic acid degradation protein paaC"
/protein_id="YP_004027966.1"
/db_xref="GI:312795044"
/db_xref="GeneID:9985550"
/translation="MPTQHHLAYVLRLADNALILGQRNAEWTGHGPVLEEDIALANIS
LDLIGQARLLYTHAGSLEAALTGQARDEDDYAFFREERQFCNYTMLELPHAGPYCGTV
RADRDYAVTIVRNFLYSTLMLLVWDALLHSSDADLTAIAAKSLKETRYHVHHARDWLV
RLGDGTDESHRRTQAAVDFLMPYTSEFFSVDELEQSIAAQGIGPLNATLQPDWAEHVR
AALDEATLAWPTTGQYVTTGKLGKHSEHMGYLLAEMQSLARQHPGARW"
misc_feature complement(268999..269787)
/locus_tag="RBRH_00381"
/note="Phenylacetic acid catabolic protein; Region:
PaaA_PaaC; pfam05138"
/db_xref="CDD:147358"
gene complement(269817..270101)
/locus_tag="RBRH_00382"
/db_xref="GeneID:9985551"
CDS complement(269817..270101)
/locus_tag="RBRH_00382"
/codon_start=1
/transl_table=11
/product="phenylacetic acid degradation protein paaB"
/protein_id="YP_004027967.1"
/db_xref="GI:312795045"
/db_xref="GeneID:9985551"
/translation="MSKEWPIWEVFVRSKQGLDHKHCGSLHAADAQMALRMARDVYTR
RQEGVSIWVVPAAAITASAPQEKSELFDPAGDKIYRHPTFYQLPDEVNHM"
misc_feature complement(269820..270101)
/locus_tag="RBRH_00382"
/note="phenylacetate-CoA oxygenase subunit PaaB;
Provisional; Region: paaB; PRK13781"
/db_xref="CDD:184322"
gene complement(270133..271131)
/locus_tag="RBRH_00383"
/db_xref="GeneID:9985552"
CDS complement(270133..271131)
/locus_tag="RBRH_00383"
/codon_start=1
/transl_table=11
/product="phenylacetic acid degradation protein paaA"
/protein_id="YP_004027968.1"
/db_xref="GI:312795046"
/db_xref="GeneID:9985552"
/translation="MYTQSLDLPGNAVLADNPVASIEQQRFDARIAADDKIEPQDWMP
DAYRKTLVRQISQHAHSEIVGMLPESNWISRAPSLKRKAILLAKVQDEGGHGLYLYSA
AETLGVSRDQMLDALHSGRAKYSSIFNYPTPSWADVGVVGWLVDGAAIMNQIPLCRCT
YGPYARAMIRICKEESFHQRQGFDALLAMMQGTAAQREMVQQAVDRWWWPVLMMFGPS
DKDSVHSNQSTRWGIKRISNDDLRQKFVDAIVAQAKVLGVTLPDPDLKWNEARGHYDY
GAVDWEEFWRVVKGDGPCNRERLATRVKAHEDGAWVREAALAYEAKQARRNEQKAA"
misc_feature complement(270166..271107)
/locus_tag="RBRH_00383"
/note="phenylacetate-CoA oxygenase subunit PaaA;
Provisional; Region: paaA; PRK13778"
/db_xref="CDD:184320"
misc_feature complement(270187..271053)
/locus_tag="RBRH_00383"
/note="phenylacetate-CoA oxygenase, PaaG subunit; Region:
PA_CoA_Oxy1; TIGR02156"
/db_xref="CDD:131211"
gene 271762..273294
/locus_tag="RBRH_r001"
/db_xref="GeneID:9985553"
rRNA 271762..273294
/locus_tag="RBRH_r001"
/product="16S ribosomal RNA"
/note="Small Subunit ribosomal RNA; ssuRNA; 16S rRNA"
/db_xref="GeneID:9985553"
gene 273358..273435
/locus_tag="RBRH_t004"
/db_xref="GeneID:9988209"
tRNA 273358..273435
/locus_tag="RBRH_t004"
/product="tRNA-Gly"
/db_xref="GeneID:9988209"
gene 273359..273435
/locus_tag="RBRH_t005"
/db_xref="GeneID:9988265"
tRNA 273359..273435
/locus_tag="RBRH_t005"
/product="tRNA-Ile"
/codon_recognized="AUC"
/db_xref="GeneID:9988265"
gene 273489..273565
/locus_tag="RBRH_t006"
/db_xref="GeneID:9988210"
tRNA 273489..273565
/locus_tag="RBRH_t006"
/product="tRNA-Ala"
/db_xref="GeneID:9988210"
gene 273490..273565
/locus_tag="RBRH_t008"
/db_xref="GeneID:9988260"
tRNA 273490..273565
/locus_tag="RBRH_t008"
/product="tRNA-Ala"
/codon_recognized="GCA"
/db_xref="GeneID:9988260"
gene 273829..276714
/locus_tag="RBRH_r002"
/db_xref="GeneID:9988211"
rRNA 273829..276714
/locus_tag="RBRH_r002"
/product="23S ribosomal RNA"
/note="Large Subunit ribosomal RNA; lsuRNA; 23S rRNA"
/db_xref="GeneID:9988211"
gene 276813..276929
/locus_tag="RBRH_r003"
/db_xref="GeneID:9988212"
rRNA 276813..276929
/locus_tag="RBRH_r003"
/product="5S ribosomal RNA"
/note="5S RNA"
/db_xref="GeneID:9988212"
gene complement(277095..278465)
/locus_tag="RBRH_03274"
/db_xref="GeneID:9988213"
CDS complement(277095..278465)
/locus_tag="RBRH_03274"
/codon_start=1
/transl_table=11
/product="metal-dependent
amidase/aminoacylase/carboxypeptidase"
/protein_id="YP_004027969.1"
/db_xref="GI:312795047"
/db_xref="GeneID:9988213"
/translation="MGSRAIFYTPRGVARTRGQHDAIGGSRRMEWSVARCSSARRRSC
AEASIMTVIVEIDAAQRQIQALRRHIHAHPELRYEETQTAELIAQTLASWGIEVHRGL
GKTGVVGVLRNGSNPRSIGLRADMDALPIQELNTFGHRSQHPGKMHACGHDGHVAMLL
GAAQYLATHRDFDGTVVFIFQPAEEGGAGARAMIEEGLFEQFPVQAVFGLHNWPGMRA
CTFGVRPGPIMASSNEFRIHIKGIGAHAAMPHNGADPIFAGVQMINALQGVITRNKRP
LDAAVLSVTQFHAGDAMNVIPADAEIAGTVRTFRTEVTDLVEDRMRDVIQATASAHRC
EARFEFARNYPPTVNSTDEARFAADVMRSIVGDDDVDDDVEPTMGSEDFSFMLQAKPG
CYAFLGNGSGAHRAAGHGLGPCELHNASYDFNDALLGVSAPYWVKLAQAWLRSSACQS
NSLMPG"
misc_feature complement(277137..278318)
/locus_tag="RBRH_03274"
/note="Metal-dependent
amidase/aminoacylase/carboxypeptidase [General function
prediction only]; Region: AbgB; COG1473"
/db_xref="CDD:31662"
misc_feature complement(277143..278282)
/locus_tag="RBRH_03274"
/note="M20 Peptidase Aminoacylase 1 subfamily; Region:
M20_Acy1_like1; cd05666"
/db_xref="CDD:193542"
misc_feature complement(order(277215..277217,277833..277835,
277911..277913,278010..278012,278016..278018))
/locus_tag="RBRH_03274"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:193542"
misc_feature complement(order(277551..277559,277575..277577,
277581..277586,277596..277616,277665..277667,
277674..277676,277683..277685,277695..277700,
277764..277766))
/locus_tag="RBRH_03274"
/note="putative dimer interface [polypeptide binding];
other site"
/db_xref="CDD:193542"
gene 278922..284552
/locus_tag="RBRH_03272"
/db_xref="GeneID:9987484"
CDS 278922..284552
/locus_tag="RBRH_03272"
/codon_start=1
/transl_table=11
/product="cell surface protein"
/protein_id="YP_004027970.1"
/db_xref="GI:312795048"
/db_xref="GeneID:9987484"
/translation="MRISDATPVIVYGAPFAHRSNYLRFALSRTLCALGVVTALLISD
VARSATVESGTQDTLMGEVASHNEGSSQPKGRKTRWDVKPPGMQDDMSVDEGAPHDKG
SSEPKARRASRWDVKPPGMQDDMSVDEGAPHDKGSSEPKARRASRWDVKPPDMQDDMS
VDEGAPHGKGSSEPKARRASRWDVKPPGMQDDMSVDEGAPHGKGSSEPKARRASRWDV
KPPGMQDDMSVDEGAPHDKGSSEPKARRASRWDVKPPDMQDDMSVDEGAPHGKGSSEL
KARRASRWDVKPPGMQDDMSVGESMPHGKGAIPSKVRETSRWDVKPSDKQDKRIDKVA
PHDKGPSQPKGRKTRWDVKPPGMQDDMSVDEGAPHGKGSSEPKARRASRWDVKPPGMQ
DDMSVDEGAPHDKGSSEPKARRASRWDVKPPDMQDDMSVDEGAPHGKGTIPSKVRETS
RWDVKPSDKQDTRIDKVAPHDKGSSELKARRASRWDVKPPGMQDDMSVDEGAPHGKGA
IPSKVRETSRWDVKPSDMQDKLAPKRKQRPDVTDGKPTEVGVRREKRMRERSHSVPIF
LPSESSPSEVDRFSKRIRQADESLFVIAPQKDRGESGDSQKDTANQIDTGRLHPPVTG
KGYTDGSIASLPSVQGANRIRQRSRSLSALSPEQEQRRLQVDTPLFILSPSPDGGDGD
WNSLQQIRLHEPAWAQSAVSGVPPTNTHDMLIDETASHDQGSRQPKVRESRLDVKPST
PVSDTENTLVSKGKWKQQLDVTPETPMEVGVQRKKRMRERSHSVPIFLPSESSPSEAD
RFSKRIRQADESLFVIAPQKGSGKSGDSQKGTADQIDTGRLRPSLKQPQFGDITGKAT
TDSGIALVPGKGANRTRQRSQSLPVLSPGLEQRRLQVDTPLFVLSPSPDGGDGDWDGL
QQIRSPEPAWPQSVFSNVPPTGAALTYESTVAVPPETTFPILLPIPPGQTVTSVTATT
PTADSGIDSNVVGSEAVVLRDAGGNTHTSILGTSGSIPENGTRTDTAMVIPSNSRSKE
QGTLTESDGVKPYDVDKYDDEWQSDSAPSTEMKVAQAGEPSKPPVQQERQTGHNASAR
ISATHSASRRSSASTTSDAGTSIDGRSTQSAGESSNQLPIQTLGANASPTLQQTTVAD
KVLDAAPGNRGRSKSAVLSQPQVAKRVRSSSEDRLRPGGLDAAGLEHGIWQSGPAPSK
EMKVTQVSEAPASQVSEASAQREWATGYDASATISVEHPASRRGSASTASDAGTSIDG
RSTQSAGESSNQLLAQTLEANASPTLQQTTVADKVLDAAPGNRGRSKSAMLLQPQVAK
RVRSSSEDRLRSGGLDAAGLEHGIWQSGPAPSKEMKVAQVSEAPASQVSETSAQQEWA
TGYDASATISVEHPASRRGSASTASDAGTSIDGRSTQSAGESSNQLPPQTLEASPTLQ
QTTVADKVLDAAPGNRGRSKSAVLSQPQVAKRVRSSSEDRLGLGGLDAAGLEHGIWQS
GPAPSKEMKVAQVNEAPALQVSEASVQQEWATGYNASATMSAAHSASRRGSASTTSTI
NSMMADERERTLPLPPTESAGANRSLNSDLPSAVEQKPSGMKSAVMTLTTAILDGDGR
PRPTEQTSPARAALTNPEKSDGTNALAAYADQRNADNLEGNAGVDPLSVGQADLMSKT
GKEKPAQAGENIPEPVASSSSNVPSRGQTDQEQNSEPTEMTSLTRPGPSMAAATPRDA
APEQDMRHGWLRKAIAAELPSVMNEQLGISVDEAHISVGTPGHERKITHVARGTAPTD
AVNKAQLDEAVARVDRDASAGIAAAMAVAGLPQPTLPGKSLATFAGATYRGQYGAALG
ISHITPNNRWVFKLAANANGRGYFGAAVSGGFQW"
misc_feature <284205..284549
/locus_tag="RBRH_03272"
/note="Autotransporter adhesin [Intracellular trafficking
and secretion / Extracellular structures]; Region: Hia;
COG5295"
/db_xref="CDD:34886"
misc_feature 284232..284294
/locus_tag="RBRH_03272"
/note="Haemagglutinin; Region: HIM; pfam05662"
/db_xref="CDD:114389"
misc_feature 284313..284549
/locus_tag="RBRH_03272"
/note="YadA-like C-terminal region; Region: YadA;
pfam03895"
/db_xref="CDD:202800"
gene 284775..286565
/locus_tag="RBRH_03271"
/db_xref="GeneID:9987483"
CDS 284775..286565
/locus_tag="RBRH_03271"
/EC_number="6.2.1.3"
/codon_start=1
/transl_table=11
/product="long-chain-fatty-acid--CoA ligase"
/protein_id="YP_004027971.1"
/db_xref="GI:312795049"
/db_xref="GeneID:9987483"
/translation="MSGDAVAASMPFLARSFEINRRRCRMERIWLKSYPAGVPADIDP
SIYASVTLLLEESFVKFAERPAFACMGQVLTYGELDRLSRALAAYLQCKGLVKGARVA
VMMPNVLQYPVAIAAVLRAGYVMVNVNPLYTPRELEHQLRDSGAQAIILLENFATTLQ
AVVSNTDVKHVIVAALGDLMGVKGCLVNWVVRHVKKRVPAWSLPGSVRFNDALAQGKR
STFRPVRQGPDDVAFLQYTGGTTGIAKGAMLLHRNIVANVLQSEVWLNPARSAHAEFT
QFTTVIALPLYHIYALTVCALLTIRTGGLGVLIPNPRDITGTIKQLKGYAVSMFPAVN
TLYNALLNHPDFGKLDFSKLVVANAGGMAVQEAVAKRWYEMTGVPIIEGYGLSETSPC
VTCNPATCTEYTGTIGLPLPSTEVSIRDDEGNELPLGQPGEICIRGPQVMAGYWNRPD
ETANATTADGFFKSGDVGVIDECGYVKIVDRKKDMILVSGFNVYPNEVEDVVAKMPGV
YEVAAVGVANPHSGEAVKLFIVKKDPALTEQAVIEFCRARLAGYKRPKAVEFRAELPK
TNVGKILRRELRDAPQHRACPDVDLAGTLS"
misc_feature 284850..286511
/locus_tag="RBRH_03271"
/note="Long-chain-fatty-acid--CoA ligase; Validated;
Region: PRK07059"
/db_xref="CDD:180816"
misc_feature 284997..286313
/locus_tag="RBRH_03271"
/note="AMP-binding enzyme; Region: AMP-binding; pfam00501"
/db_xref="CDD:201270"
misc_feature 286428..>286511
/locus_tag="RBRH_03271"
/note="Domain of unknown function (DUF4009); Region:
DUF4009; pfam13193"
/db_xref="CDD:205374"
gene complement(286665..287849)
/locus_tag="RBRH_03270"
/db_xref="GeneID:9987482"
CDS complement(286665..287849)
/locus_tag="RBRH_03270"
/codon_start=1
/transl_table=11
/product="outer membrane porin protein 32"
/protein_id="YP_004027972.1"
/db_xref="GI:312795050"
/db_xref="GeneID:9987482"
/translation="MKKSLLALAALGAFSGVAHAQSSVTLYGIIDEGVNYTSNSGGHT
LWNLSSGVMQGSRWGLRGTEDLGGGLTAIFTLENGFDVNTGKSGQGGLEFGRQAFVGL
SSSGFGTVTLGRQYDSVVDYVGPLEAGDQWGGYIAAHPGDLDNFNNAYRINNSIKYTS
PNFAGLTFGGLYSLGGVAGDFSRNQAFSLGAGYTNGPLVLGVGYLNVRNPNVSFFGNS
TSGTINAGVSNVTSSVYGGYGSAHTYQVIGAGGAYTFGPATVGITYSNTKFYNLGSTY
ASAFAGSTATFNNAEINFKYQLTPALVLGAAYDFTKGSSVNGQSGAKYHQGALGADYF
LSKRTDVYLIGVYQHASGNTVSTSSSGVDSVVAATANISGLSPSTTNNQATVRVGIRH
KF"
misc_feature complement(286668..287786)
/locus_tag="RBRH_03270"
/note="Porins form aqueous channels for the diffusion of
small hydrophillic molecules across the outer membrane.
Individual 16-strand anti-parallel beta-barrels form a
central pore, and trimerizes thru mainly hydrophobic
interactions at the interface. Trimers...; Region:
gram_neg_porins; cd00342"
/db_xref="CDD:30071"
misc_feature complement(order(286668..286670,286674..286676,
286680..286682,286833..286835,286842..286847,
287388..287393,287397..287399,287508..287516,
287544..287558,287562..287567,287601..287612,
287616..287618,287622..287630,287634..287636,
287652..287666,287748..287756,287760..287762,
287778..287780,287784..287786))
/locus_tag="RBRH_03270"
/note="trimer interface [polypeptide binding]; other site"
/db_xref="CDD:30071"
misc_feature complement(order(287397..287399,287469..287471,
287562..287564,287679..287681,287763..287765))
/locus_tag="RBRH_03270"
/note="eyelet of channel; other site"
/db_xref="CDD:30071"
gene 288224..288853
/locus_tag="RBRH_03267"
/db_xref="GeneID:9987481"
CDS 288224..288853
/locus_tag="RBRH_03267"
/EC_number="1.14.13.-"
/codon_start=1
/transl_table=11
/product="2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol
hydroxylase"
/protein_id="YP_004027973.1"
/db_xref="GI:312795051"
/db_xref="GeneID:9987481"
/translation="MLLDELIGEFDRGLRSITGVARMSRPVPQPDVVADDSEMTVAEQ
SHAAALMRVNHVGEVCAQALYQAQKLATRSERLKQAFERAAREEEDHLAWTAHRLREL
DSRPSLLNPLWYAGSLAIGFVAGRFGDRVSLGFMAETERQVEQHLDGHLDRLPAGDHA
SRAIVMQMRTDEMAHARAASDAGGVELAAPVTALMRMAARVMTRTAYYI"
misc_feature 288362..288847
/locus_tag="RBRH_03267"
/note="Demethoxyubiquinone hydroxylase, ferritin-like
diiron-binding domain; Region: DMQH; cd01042"
/db_xref="CDD:153101"
misc_feature order(288395..288397,288485..288487,288494..288496,
288641..288643,288737..288739,288746..288748)
/locus_tag="RBRH_03267"
/note="diiron binding motif [ion binding]; other site"
/db_xref="CDD:153101"
gene 289329..289781
/locus_tag="RBRH_03265"
/db_xref="GeneID:9987480"
CDS 289329..289781
/locus_tag="RBRH_03265"
/codon_start=1
/transl_table=11
/product="cell division protein mraZ"
/protein_id="YP_004027974.1"
/db_xref="GI:312795052"
/db_xref="GeneID:9987480"
/translation="MPVTGRWHVFQGASALTLDAKGRMSVPSRYRQVLLGQAQGRVTI
TKHPDGCLLLFPQPEWEAFRNKIAALPMDAHWWRRIFLGNASDVEMDSAGRVLVSPEL
RTAANLEREVMLLGMGSHFELWDAQTYAAKEQAAMAQGMPDALKNFTF"
misc_feature 289353..289757
/locus_tag="RBRH_03265"
/note="cell division protein MraZ; Reviewed; Region:
PRK00326"
/db_xref="CDD:178978"
misc_feature 289356..289568
/locus_tag="RBRH_03265"
/note="MraZ protein; Region: MraZ; pfam02381"
/db_xref="CDD:111290"
misc_feature 289569..>289730
/locus_tag="RBRH_03265"
/note="MraZ protein; Region: MraZ; pfam02381"
/db_xref="CDD:111290"
gene 289796..290749
/locus_tag="RBRH_03264"
/db_xref="GeneID:9987479"
CDS 289796..290749
/locus_tag="RBRH_03264"
/EC_number="2.1.1.-"
/codon_start=1
/transl_table=11
/product="S-adenosyl-methyltransferase mraW"
/protein_id="YP_004027975.1"
/db_xref="GI:312795053"
/db_xref="GeneID:9987479"
/translation="MASAMEKPGQHRTVLLDEAVDALITRADGIYVDGTFGRGGHSRA
VLARLAPAARLIAFDKDPQAIEVARGIADPRLNVVHGSFAQLRDVLAARGGVRVSGVL
LDLGVSSPQIDDPARGFSFRHDGPLDMRMDPTRGESAAQWLAHVDERELIEVIRDYGE
ERFAVQIAKAIVARRAESGRLGPIVRTRELAEIVARAVKTREKGQDPATRTFQAIRIH
INQELAELPVVLETALESLEQGGRLVVISFHSLEDRIVKRFFQSHARAPAVDRRLPIR
AADLPSPPLRILGRVFAGEAEVAANPRARSAVMRIAERVLA"
misc_feature 289808..290737
/locus_tag="RBRH_03264"
/note="Predicted S-adenosylmethionine-dependent
methyltransferase involved in cell envelope biogenesis
[Cell envelope biogenesis, outer membrane]; Region:
COG0275"
/db_xref="CDD:30623"
misc_feature 289823..290740
/locus_tag="RBRH_03264"
/note="16S rRNA m(4)C1402 methyltranserfase; Provisional;
Region: PRK00050"
/db_xref="CDD:178824"
gene 290746..291105
/locus_tag="RBRH_03263"
/db_xref="GeneID:9987478"
CDS 290746..291105
/locus_tag="RBRH_03263"
/codon_start=1
/transl_table=11
/product="cell division protein ftsL"
/protein_id="YP_004027976.1"
/db_xref="GI:312795054"
/db_xref="GeneID:9987478"
/translation="MSRLNIFLLLVVLGCALSVVNATNRQREVFIDLQRAQSQEHQLQ
LDYAQLQYQQGALSKTSRIERMATADLKMQPVVPGRTQYLSVDPASVPADTPPASDAG
AGASGSASPGTTAGAAR"
misc_feature 290746..290994
/locus_tag="RBRH_03263"
/note="cell division protein FtsL; Region: ftsL_broad;
TIGR02209"
/db_xref="CDD:131264"
gene 291102..292892
/locus_tag="RBRH_03262"
/db_xref="GeneID:9987477"
CDS 291102..292892
/locus_tag="RBRH_03262"
/codon_start=1
/transl_table=11
/product="Division specific D,D-transpeptidase / cell
division protein ftsI"
/protein_id="YP_004027977.1"
/db_xref="GI:312795055"
/db_xref="GeneID:9987477"
/translation="MKRSTHHRRHVPFSSSPVLSVHLPMWRSKLIVFLLFVAFVALAA
RAFWIQGPGNAFYQKQGESRYQRTIELPATRGKILDRNGLVLATSLPVRAIWAIPESV
PNDLGAGKLAELSKLLSMGEKALRAKLSQDKTFVYVKRQVPLDVAQKVAALDIPGIYA
RPEYKRFYPEGEITAHMIGFTNVEDEGQEGIELADQKALAGVPGSRRVIKDRIGHIVE
DVDEWVKPRDGQDIALSLDSKIQYIAYANLKAAVDRFKAKAGAAIVIDVKTGEVLALV
NYPTYNPNNRSHLTGEQLRNRVLTDVFEPGSIMKPFTVSLALDLHRVLPTTLVDTGGG
RFTLDGATITDDAGFGVLTVGGVIQKSSNIGATKIAMQLRPEEMWNMYTSIGLGQAPK
VGFPGAAAGRLRPWKSWRRIEQATMSYGYGLSASLFQLGRAYTAIAHDGRIIPLTLIR
GNNGDEPQGTQVFSATTARQVRAMLESVTQPGGTSPDAAVPGYRVGGKSGTAYKHVGR
GYDRGKYRASFVGMAPMPNPRIVVAVSVDEPTAGSHFGGQVSGPVFSAIAGDTLRSLN
VPPDMPVKQLVVSDDAKSIINVSATQRTVR"
misc_feature 291135..292811
/locus_tag="RBRH_03262"
/note="Cell division protein FtsI/penicillin-binding
protein 2 [Cell envelope biogenesis, outer membrane];
Region: FtsI; COG0768"
/db_xref="CDD:31111"
misc_feature 291312..291764
/locus_tag="RBRH_03262"
/note="Penicillin-binding Protein dimerisation domain;
Region: PBP_dimer; pfam03717"
/db_xref="CDD:202738"
misc_feature 291879..292772
/locus_tag="RBRH_03262"
/note="Penicillin binding protein transpeptidase domain;
Region: Transpeptidase; pfam00905"
/db_xref="CDD:144486"
gene 292889..294421
/locus_tag="RBRH_03261"
/db_xref="GeneID:9987476"
CDS 292889..294421
/locus_tag="RBRH_03261"
/EC_number="6.3.2.13"
/codon_start=1
/transl_table=11
/product="UDP-N-acetylmuramoylalanyl-D-glutamate--2,
6-diami nopimelate ligase"
/protein_id="YP_004027978.1"
/db_xref="GI:312795056"
/db_xref="GeneID:9987476"
/translation="MSRSPLTPEQIERVRAEVLAWLRARLAPHAQLRVDSRAVCAGDA
FVAYAVDSADSRAYIADALQRGAAAVLVQAGGEFPGGGPVLQVPELDQLAGHIASAWY
GEPSRDMLMVGITGTNGKTTTSHWVAGALSGSGTRCAIIGTLGTGLPGQLSPTGFTTP
DAPQVHHSLAALRAHGASAVSMEVSSHALHQGRVNGVAFDIAVFTNLTQDHLDYHKDL
ASYEAAKARLFDWPGLRAAVINRDDEAGRRLIGHLATRVRTISYGIASTRPRGDASLH
AMAIRATATGTAFTVVSDWGHAELEVGTLGLFNVANLLAVLGVLLAADVPFDAALSQI
TRLEPVNGRMQQLGGRPQVDEPLVVVDYAHTPDALEKTLDALRPIATQRGGKLVCVFG
CGGERDATKRPLMGAIAERLADSVIVTSDNPRSEPPLAIIGQIVSAMREPARVRTIED
RAGAILQAVRGASAADVVLIAGKGHEATQEVMGKKRPFSDQDHAHLALASRVTQPRGE
AE"
misc_feature 292943..294391
/locus_tag="RBRH_03261"
/note="UDP-N-acetylmuramoylalanyl-D-glutamate--2,
6-diaminopimelate ligase; Provisional; Region: murE;
PRK00139"
/db_xref="CDD:178894"
misc_feature 292991..293194
/locus_tag="RBRH_03261"
/note="Mur ligase family, catalytic domain; Region:
Mur_ligase; pfam01225"
/db_xref="CDD:201670"
misc_feature 293231..293797
/locus_tag="RBRH_03261"
/note="Mur ligase middle domain; Region: Mur_ligase_M;
pfam08245"
/db_xref="CDD:203888"
misc_feature 293906..294184
/locus_tag="RBRH_03261"
/note="Mur ligase family, glutamate ligase domain; Region:
Mur_ligase_C; pfam02875"
/db_xref="CDD:202441"
gene 294418..295848
/locus_tag="RBRH_03260"
/db_xref="GeneID:9987475"
CDS 294418..295848
/locus_tag="RBRH_03260"
/EC_number="6.3.2.10"
/codon_start=1
/transl_table=11
/product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
alanine ligase"
/protein_id="YP_004027979.1"
/db_xref="GI:312795057"
/db_xref="GeneID:9987475"
/translation="MTMLTLREAAALIDGATVLGDDTVAFDQVSTDSRSCGPASLFVA
LKGERFDAHDFLPDLARRGVAAVLVSRSPGDWRVPAIRVADTRAALGALAAGWRRRFA
LPLVAVTGSNGKTTVKEMIASIFAAAVGHAQRLSTQGNLNNVIGMPLTLLQLAPQHRL
AVVELGMNRPGETQQLARIAGPTIALVNNAQREHQEFMATVEAVALEHASVIHALPPD
GTAVFPADDPYAGIWRVAATDNRIVDFALRRPGANSDAAVQGTTTDTGALRIETRAGA
LEVSLRAPGEHNARNALAATAAALAAGVGLDAIRRGLETFEPVNGRLQAKLAQAMPWA
GATVIDDTYNANPDSMRAAIDVLTMRQAPRVLVMGDMGEVGDNGPAFHREVGAYARER
GLDALYALGDASRDACTAFGPHAHHFDSAEALICALLRQDAVASERAAGATILVKGSR
FMRMERVVQALTLPTATDAPARTGAH"
misc_feature 294502..294675
/locus_tag="RBRH_03260"
/note="Mur ligase family, catalytic domain; Region:
Mur_ligase; pfam01225"
/db_xref="CDD:201670"
misc_feature 294508..295791
/locus_tag="RBRH_03260"
/note="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine
ligase; Region: murF; TIGR01143"
/db_xref="CDD:200077"
misc_feature 294742..295278
/locus_tag="RBRH_03260"
/note="Mur ligase middle domain; Region: Mur_ligase_M;
pfam08245"
/db_xref="CDD:203888"
misc_feature 295426..295632
/locus_tag="RBRH_03260"
/note="Mur ligase family, glutamate ligase domain; Region:
Mur_ligase_C; pfam02875"
/db_xref="CDD:202441"
gene 295845..297029
/locus_tag="RBRH_03259"
/db_xref="GeneID:9987474"
CDS 295845..297029
/locus_tag="RBRH_03259"
/EC_number="2.7.8.13"
/codon_start=1
/transl_table=11
/product="phospho-N-acetylmuramoyl-pentapeptide-
transferase"
/protein_id="YP_004027980.1"
/db_xref="GI:312795058"
/db_xref="GeneID:9987474"
/translation="MKGPRMLLALAQWLQSDASYLRVINYLTFRAVMATITALLIGLI
CGPAVIHKLTALKMGQAVRKDGPQTHLIKSGTPTMGGVLILIGIAVSTLLWSDLTNRF
IWIVMLVTFGFGVIGWVDDYRKVVYKDPRGMSSREKYFWQSVIGLFAAVYLAFSVSEA
NNARVFDLFMAWVRSGFSIGLPARADLALPFLKAISYPLGVWGFIALTYFVIVGSSNA
VNLTDGLDGLVIMPVVLVGAALGVFAYVMGSAVYSKYLLFAHIPGAGELLIFCSAMGG
AGLAFLWYNTYPARVFMGDVGALALGGALGTIAVIVRQEIVLFIMGGVFVAETVSVML
QVTWFRYTKRRYGEGRRIFKMAPLHHHFELSGWKETQVVVRFWIITLMLCLFGLSTLK
LR"
misc_feature 295905..297026
/locus_tag="RBRH_03259"
/note="phospho-N-acetylmuramoyl-pentapeptide-transferase;
Provisional; Region: mraY; PRK00108"
/db_xref="CDD:178869"
misc_feature 296040..297014
/locus_tag="RBRH_03259"
/note="Phospho-N-acetylmuramoyl-pentapeptide-transferase
(mraY) is an enzyme responsible for the formation of the
first lipid intermediate in the synthesis of bacterial
cell wall peptidoglycan. It catalyzes the formation of...;
Region: GT_MraY; cd06852"
/db_xref="CDD:133462"
misc_feature 296202..296207
/locus_tag="RBRH_03259"
/note="Mg++ binding site [ion binding]; other site"
/db_xref="CDD:133462"
misc_feature 296718..296729
/locus_tag="RBRH_03259"
/note="putative catalytic motif [active]"
/db_xref="CDD:133462"
misc_feature order(296895..296897,296913..296927)
/locus_tag="RBRH_03259"
/note="putative substrate binding site [chemical binding];
other site"
/db_xref="CDD:133462"
gene 297053..298570
/locus_tag="RBRH_03258"
/db_xref="GeneID:9987473"
CDS 297053..298570
/locus_tag="RBRH_03258"
/EC_number="6.3.2.9"
/codon_start=1
/transl_table=11
/product="UDP-N-acetylmuramoylalanine--D-glutamate ligase"
/protein_id="YP_004027981.1"
/db_xref="GI:312795059"
/db_xref="GeneID:9987473"
/translation="MFGEKFGERQRPTTLVLGLGESGLAMARWCARHGCRLRVADTRA
APPNLSQWAALGIDAEFVGGAFSPALLDGGIELVAISPGLSPLGADLAALIGAARERG
IDVWGELEFFAQALRALATDGYQPKVLAVTGTNGKTTTTALTGLLCERAGRSVAVAGN
ISPAMLDKLAEAIDAAKLPDVWVLELSSFQLETSHTFEPDAAVILNITQDHLDWHGGL
DAYAAAKGRIFGLRTLRVLNRDDARVMACVPAGDAIAPYWTFGLNVPQNDGDYGIQRD
GGIAWLLQAHERNDASEQRAMHRRRKSGGLAPDIALKRLMPVDALRIRGLHNATNAMA
ALALAQSIGLPLAALLHGLREYRGEPHRVEWIGSIDGVDYIDDSKGTNVGATVAALDG
LAQRIVLIAGGDGKGQDFAPLAAPVARWCRAVMLIGRDAPALRAALADTGVELALHPS
LQAATRAAAAVAQPGDAVLLSPACASLDMFSGYAQRAQVFRSEIEDIAADKGGVL"
misc_feature 297065..298567
/locus_tag="RBRH_03258"
/note="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
synthetase; Provisional; Region: murD; PRK02006"
/db_xref="CDD:179359"
misc_feature 297497..297901
/locus_tag="RBRH_03258"
/note="Mur ligase middle domain; Region: Mur_ligase_M;
pfam08245"
/db_xref="CDD:203888"
misc_feature 298130..>298306
/locus_tag="RBRH_03258"
/note="Mur ligase family, glutamate ligase domain; Region:
Mur_ligase_C; pfam02875"
/db_xref="CDD:202441"
gene 298567..299841
/locus_tag="RBRH_03257"
/db_xref="GeneID:9987472"
CDS 298567..299841
/locus_tag="RBRH_03257"
/codon_start=1
/transl_table=11
/product="cell division protein ftsW"
/protein_id="YP_004027982.1"
/db_xref="GI:312795060"
/db_xref="GeneID:9987472"
/translation="MSRAQRIAARLAGCRYAVPSDGVGAATPARGVGLASAVSGIRPL
RSRMRDYDHSLLWVTIALLSLGLVMVYSASIALPDSPKYSAYTPYHFLVRHVVSLVTG
VLCALVAFRIPVKTWDKYAPRFFLVALLLLVIVLIPHLGKGVNGARRWIPLGITNMQP
SEIMKLAVTIYAANYTVRKQEYMHQFTKGFLPMALAVGVVGALLLLEPDMGAFMVIAA
IAMGVLFLGGVSGRLFGGLALTAIGTFAMLVWASPWRRERIFAYLNPWDDRYAQGKAY
QLTHSLIAFGRGEWFGVGLGGSVEKLNYLPEAHTDFILAVIGEELGFVGVVFVILLFY
WIVRRAFEIGRQALALDRTFAGLVAKGIGLWVGAQTFINMGVNLGLLPTKGLTLPLVS
YGGSGILLNCVALSLLMRVDYENRVLMRGGKV"
misc_feature 298720..299811
/locus_tag="RBRH_03257"
/note="cell division protein FtsW; Region: ftsW;
TIGR02614"
/db_xref="CDD:162950"
gene 299838..300968
/locus_tag="RBRH_03256"
/db_xref="GeneID:9987471"
CDS 299838..300968
/locus_tag="RBRH_03256"
/EC_number="2.4.1.227"
/codon_start=1
/transl_table=11
/product="UDP-N-acetylglucosamine--N-acetylmuramyl-
(pentape ptide) pyrophosphoryl-undecaprenol
N-acetylglucosamine transferase"
/protein_id="YP_004027983.1"
/db_xref="GI:312795061"
/db_xref="GeneID:9987471"
/translation="MSARTLLVMAGGTGGHVFPGLAVAQRMQAQGWRVVWLGNPNAME
ATLVPKYGIAVEFVRFGGVRGKGIATKLRLPLNLLRACLQSRAVLGRVQPDVVLGMGG
YITFPAGVMAVLARIPLVLHEQNSIAGLANKLLSRLARRVLVAFPDALPGAHWTGNPI
RAELAAVAPPEVRYAARTGPLRVLVVGGSLGAAALNKTVPCALALLDPAQRPHVVHQA
GAKHIEALRAHYADAGLVQGDGIELVPFIDDMARAYAEADLVICRSGAMTVSEIAAVG
VAALFVPFPFAVDDHQTSNAAFLVAHHAASVMQQNELSAKKLADWIGGQTRASLACVA
ARARELAKPDAAERVAQVCASLVTRDVADASHASRHGAQGKQ"
misc_feature 299847..300908
/locus_tag="RBRH_03256"
/note="undecaprenyldiphospho-muramoylpentapeptide beta-N-
acetylglucosaminyltransferase; Provisional; Region: murG;
PRK00726"
/db_xref="CDD:179100"
misc_feature 299850..300893
/locus_tag="RBRH_03256"
/note="MurG is an N-acetylglucosaminyltransferase, the
last enzyme involved in the intracellular phase of
peptidoglycan biosynthesis. It transfers
N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4
hydroxyl of a lipid-linked N-acetylmuramoyl
pentapeptide...; Region: GT1_MurG; cd03785"
/db_xref="CDD:99961"
misc_feature order(299880..299882,300210..300212,300402..300404,
300486..300488,300573..300575,300585..300587,
300630..300641,300648..300650,300687..300689,
300708..300713,300720..300722)
/locus_tag="RBRH_03256"
/note="active site"
/db_xref="CDD:99961"
misc_feature order(300051..300053,300060..300062,300093..300095,
300177..300179,300252..300254)
/locus_tag="RBRH_03256"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:99961"
gene 300893..302356
/locus_tag="RBRH_03255"
/db_xref="GeneID:9987470"
CDS 300893..302356
/locus_tag="RBRH_03255"
/EC_number="6.3.2.8"
/codon_start=1
/transl_table=11
/product="UDP-N-acetylmuramate--L-alanine ligase"
/protein_id="YP_004027984.1"
/db_xref="GI:312795062"
/db_xref="GeneID:9987470"
/translation="MRVARHARCGRRIARVAARCARKAMKHIVKHIHFVGIGGAGMSG
IAEVLVNLGYQVSGSDLSRSVVTDRLSGLGAHIMFGHDARHIDGADAVVISTAVHADN
PEVLEARRRHIPIVPRAVMLAELMRLKQGIAIAGTHGKTTTTSLVASVLAAGGLDPTF
VIGGRLISAGANARLGTGDFIVAEADESDASFLNLFPVIEVITNIDADHMDTYGHDFA
RLKQAFIEFTHRLPFYGIAVLCVDDPNVREILPFVSKPIIRYGFAQEADVRATHVCAR
DGRMHFTVHRADAAPLDIVLNLPGTHNVQNALAAIAIATELEVADADIQSALAEFNGV
GRRFQRYGEVPLTRGGAYLLIDDYGHHPVEMAATIAAARGAFPDRRLVLVFQPHRYTR
TRDCFEDFVKVLSTVDALVLTEVYAAGEAPIVAADGRALARAIRVAGRVEPVFVDTLD
EIPDALAAMVADGDVVMTMGAGSIGGVPARLTQEQRA"
misc_feature 300965..302353
/locus_tag="RBRH_03255"
/note="UDP-N-acetylmuramate--L-alanine ligase;
Provisional; Region: murC; PRK00421"
/db_xref="CDD:179018"
misc_feature 300983..301279
/locus_tag="RBRH_03255"
/note="Mur ligase family, catalytic domain; Region:
Mur_ligase; pfam01225"
/db_xref="CDD:201670"
misc_feature 301298..301804
/locus_tag="RBRH_03255"
/note="Mur ligase middle domain; Region: Mur_ligase_M;
pfam08245"
/db_xref="CDD:203888"
misc_feature 301892..302170
/locus_tag="RBRH_03255"
/note="Mur ligase family, glutamate ligase domain; Region:
Mur_ligase_C; pfam02875"
/db_xref="CDD:202441"
gene 302353..303300
/locus_tag="RBRH_03254"
/db_xref="GeneID:9987469"
CDS 302353..303300
/locus_tag="RBRH_03254"
/EC_number="6.3.2.4"
/codon_start=1
/transl_table=11
/product="D-alanine--D-alanine ligase"
/protein_id="YP_004027985.1"
/db_xref="GI:312795063"
/db_xref="GeneID:9987469"
/translation="MKMRAIDPKAFGKVAVLYGGESSERDVSLVSGRLACQGLRDAGV
DAYLFDPKERPLSALKDEGFARAFIALHGGYGENGQIQGALDFYGIRYTGPGVLGSAL
GMDKFRTKLIWQQLGIPTPPFDTVLRGEDYDMRAQQIVAKLGLPLFVKPATEGSSVAV
FKVKAADNLPHALAQAARHDPVVLVEKSIDGGGEYTACIAGSLPLPLIRIVPAGEFYD
YHAKYVADDTQYLIPCGLSDADEQRLTALARRAFEVLACTAWGRADFMLDSDGNPYFL
EVNTSPGMTDHSLPPKAARAVGISYSELLVNVLALTLKD"
misc_feature 302374..303297
/locus_tag="RBRH_03254"
/note="D-alanine--D-alanine ligase; Reviewed; Region: ddl;
PRK01372"
/db_xref="CDD:179288"
misc_feature 302389..302637
/locus_tag="RBRH_03254"
/note="D-ala D-ala ligase N-terminus; Region:
Dala_Dala_lig_N; pfam01820"
/db_xref="CDD:201991"
misc_feature 302686..303279
/locus_tag="RBRH_03254"
/note="ATP-grasp domain; Region: ATP-grasp_4; cl03087"
/db_xref="CDD:207834"
gene 303316..304077
/locus_tag="RBRH_03253"
/db_xref="GeneID:9987468"
CDS 303316..304077
/locus_tag="RBRH_03253"
/codon_start=1
/transl_table=11
/product="cell division protein ftsQ"
/protein_id="YP_004027986.1"
/db_xref="GI:312795064"
/db_xref="GeneID:9987468"
/translation="MWNNPRQLNMITSALHAVLLAIVLAGAGLWLLQRPAFALRTLLI
DGDTEHINRPAVRANVLDKLHGNFFTVNLDGARAAFEQIPWVRHASVRRVWPNALAVT
LEEYKPLGTWGSDQFVSVDGEVFTANQAEADAELPVFAGPMGSERDVVARYHDFQNWF
EPLGAKPEEVTLSPRYAWTIKLTNGMRVELGRERNKDTLASRARRLVVAWPMVTQRWG
NDIEYVDLRYPNGFAIRAAGMRFIPDEPKAKKLRP"
misc_feature <303418..304029
/locus_tag="RBRH_03253"
/note="Cell division septal protein [Cell envelope
biogenesis, outer membrane]; Region: FtsQ; COG1589"
/db_xref="CDD:31777"
misc_feature 303430..303633
/locus_tag="RBRH_03253"
/note="POTRA domain, FtsQ-type; Region: POTRA_1;
pfam08478"
/db_xref="CDD:149506"
misc_feature 303652..303996
/locus_tag="RBRH_03253"
/note="Cell division protein FtsQ; Region: FtsQ;
pfam03799"
/db_xref="CDD:202772"
gene 304114..305346
/locus_tag="RBRH_03252"
/db_xref="GeneID:9987467"
CDS 304114..305346
/locus_tag="RBRH_03252"
/codon_start=1
/transl_table=11
/product="cell division protein ftsA"
/protein_id="YP_004027987.1"
/db_xref="GI:312795065"
/db_xref="GeneID:9987467"
/translation="MSKDYKDLLVALDIGTSKVVAVVAELKGEGRYEVIGLGQSDSKG
LKKGVVVNIEATVQSIQRALEEAELMADCKITNVFTGIAGSHIRSFNSSGMVAIKDKE
VTQADVARVIETAKAINIPTDQQVLHILTQEFIIDGQEDVREPIGMSGIRLEVKVHIV
TGAVSAAQNIVKCVRRCGLEVNDLILQPLASSLAVLTEDEKELGVVLVDIGGGTTDIA
IFSEGAIRHTAVIPIAGDQVTSDIAMALRTPTPDAEDIKVTYGIAKQALADPDEMIEV
PGLGERGPRVLSRQALAAVIEPRVEELFSLVQQVVRESGYEELLSSGVVLTGGAAMMA
GMVELGEDIFLKPVRIGVPEYAGGLADVVRNPRYSTAMGLLVEGRSQRMRGRKVATQS
GSATQVWSRMKEWFLGNF"
misc_feature 304135..305238
/locus_tag="RBRH_03252"
/note="cell division protein FtsA; Region: ftsA;
TIGR01174"
/db_xref="CDD:162236"
misc_feature 304141..304671
/locus_tag="RBRH_03252"
/note="Nucleotide-Binding Domain of the sugar
kinase/HSP70/actin superfamily; Region:
NBD_sugar-kinase_HSP70_actin; cd00012"
/db_xref="CDD:212657"
misc_feature order(304150..304161,304165..304167,304171..304173,
304483..304485,304540..304542)
/locus_tag="RBRH_03252"
/note="nucleotide binding site [chemical binding]; other
site"
/db_xref="CDD:212657"
misc_feature order(304672..304674,304738..304749,305095..305097)
/locus_tag="RBRH_03252"
/note="nucleotide binding site [chemical binding]; other
site"
/db_xref="CDD:212657"
misc_feature 304726..305166
/locus_tag="RBRH_03252"
/note="Cell division protein FtsA; Region: FtsA;
pfam14450"
/db_xref="CDD:206616"
gene 305443..306648
/locus_tag="RBRH_03251"
/db_xref="GeneID:9987466"
CDS 305443..306648
/locus_tag="RBRH_03251"
/codon_start=1
/transl_table=11
/product="cell division protein ftsZ"
/protein_id="YP_004027988.1"
/db_xref="GI:312795066"
/db_xref="GeneID:9987466"
/translation="MTEALMEFEMLETETNGTIIKVVGIGGAGGNAVQHMINRGVQGV
DFIVMNTDAQALNRSKAPSVIQLGKTGLGAGAKPDMGHAAAEEARERIADALRGAHMV
FITAGMGGGTGTGAAPVVAQIAKEMGILTVGVVSKPFEFEGGKRMRVAEAGSQELESH
VDSLIVVLNDKLFDVMGDDAEMDKCFQCADDVLHNAVAGIAEIINVDGLVNVDFEDVK
TVMGEQGKAMMGTATVAGVDRARLAAEQAVASPLLEGVDLSGARGVLVNITSSRSLRL
SETREVMNTIKSYAADDATVIFGAVYDDAMGDAMRVTVVATGLGRAVKKQQAAPMTLL
RTGTDNHPIAAQPVSYAAAPGATDYGALDTPAVWRSSRETAASHVQALQEKGVDTYDI
PAFLRKQAD"
misc_feature 305458..306645
/locus_tag="RBRH_03251"
/note="cell division protein FtsZ; Validated; Region:
PRK09330"
/db_xref="CDD:181781"
misc_feature 305545..306396
/locus_tag="RBRH_03251"
/note="FtsZ is a GTPase that is similar to the eukaryotic
tubulins and is essential for cell division in
prokaryotes. FtsZ is capable of polymerizing in a
GTP-driven process into structures similar to those formed
by tubulin. FtsZ forms a ring-shaped septum at...; Region:
FtsZ_type1; cd02201"
/db_xref="CDD:100021"
misc_feature order(305605..305607,305761..305781,305854..305859,
305878..305880,305947..305949,305998..306000,
306007..306012,306019..306021)
/locus_tag="RBRH_03251"
/note="nucleotide binding site [chemical binding]; other
site"
/db_xref="CDD:100021"
misc_feature order(306070..306075,306079..306081,306259..306270,
306277..306279)
/locus_tag="RBRH_03251"
/note="SulA interaction site; other site"
/db_xref="CDD:100021"
gene 306645..306848
/locus_tag="RBRH_03250"
/db_xref="GeneID:9987465"
CDS 306645..306848
/locus_tag="RBRH_03250"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027989.1"
/db_xref="GI:312795067"
/db_xref="GeneID:9987465"
/translation="MIRASDAGVAATRTALGWTRKVGIPPDARPRLLPAEETADAALR
SGGMTDADRDCRRLADKEVQVQQ"
gene 307150..308067
/locus_tag="RBRH_03249"
/db_xref="GeneID:9987464"
CDS 307150..308067
/locus_tag="RBRH_03249"
/EC_number="3.5.1.-"
/codon_start=1
/transl_table=11
/product="UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine
deacetylase"
/protein_id="YP_004027990.1"
/db_xref="GI:312795068"
/db_xref="GeneID:9987464"
/translation="MLKQRTIKSIVKTVGIGLHSGRKVELTLRPAAANTGIVFCRTDL
AVPVDIPASAMSIGDTRLASVLEKDGARVSTVEHLMSACAGLGIDNLYVDVTAEEIPI
MDGSAASFVFLIQSAGIDEQAAAKQFIKVTRPVEVRDADKFARLEPYFGFKLKFTIDF
RHPAVDKTGQELEVDFADTSYVREIARARTFGFAHEVEMMRELGLARGGSMDNAIVLD
EYRVLNNDGLRYGDEFVKHKMLDAIGDLYVVGYPLLASYTAYKSGHGLNNALLRELLA
HEDAYEIVTFADQKAAPRGFAYDPQAVYA"
misc_feature 307150..308040
/locus_tag="RBRH_03249"
/note="UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine
deacetylase; Reviewed; Region: lpxC; PRK13186"
/db_xref="CDD:183882"
misc_feature 307153..307977
/locus_tag="RBRH_03249"
/note="UDP-3-O-acyl N-acetylglycosamine deacetylase;
Region: LpxC; pfam03331"
/db_xref="CDD:202596"
gene complement(308075..308554)
/locus_tag="RBRH_03248"
/db_xref="GeneID:9987463"
CDS complement(308075..308554)
/locus_tag="RBRH_03248"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027991.1"
/db_xref="GI:312795069"
/db_xref="GeneID:9987463"
/translation="MSRYSPYPLPRKPFTPRPLTELMSSSAELAALQAGVRQVAALEA
ALQAVLPGYLASHVHAGPIKDQALTLFAAHNALAARLRHLEPTVLTELQQRGFALRAI
KIRVRPQAPAAAAQIKQARVSVAGADCLRELADALEPSPLQQAVARMAQRHTGRRRA"
gene 308813..311671
/locus_tag="RBRH_03247"
/db_xref="GeneID:9987462"
CDS 308813..311671
/locus_tag="RBRH_03247"
/codon_start=1
/transl_table=11
/product="protein translocase subunit secA"
/protein_id="YP_004027992.1"
/db_xref="GI:312795070"
/db_xref="GeneID:9987462"
/translation="MPTRDPDPMTTGFLQKIFGSRNQRLIKQYQKTVTTINALEAQIE
KLTDEQLRAKTDEFRQRVAAGESLDKLLPEAFAVCREASRRVLKMRHFDVQLIGGMAL
HYGKIAEMRTGEGKTLVATLAAYLNALSGRGVHVVTVNDYLAQRDAEWMGRLYNFLGL
SVGINLSQMEHGQKQQAYASDITYGTNNEFGFDYLRDNMVYETDARVQRGLNFAIVDE
VDSILIDEARTPLIISGQAEDHTELYVRMNALPPLLERQIGEEKADGSGVEKPGDYTL
DEKARSVFLTESGHEKAERLLAEWGLIGDGESLYAPQNITLMHHVYAALRAHTLFFRD
QHYVVQNGEVIIVDEFTGRLMPGRRWSDGLHQAVEAKEHVKIQAENQTLASITFQNYF
RMYAKLAGMTGTADTEAYEFNEIYGLETVVVPTNRPSKRADRQDQIYKTAKERYDAVI
RDIRDCYERAQPVLVGTTSIENSELLSHLLKQAGLPHEVLNAKQHAREAAIVAEAGRP
KRITIATNMAGRGTDIVLGGNPDKQASLIEADASISDDEKRRRIQQIHDEWQTLHEQV
KAAGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSRFYLSLEDPLLRIFAGDRVRAI
MDRLKMPEGEAIEAGIVTRSIESAQRKVEARNFDIRKQLLEYDDVSNDQRKVIYQQRN
ELLEAQDIHETIGAMRHGVLTEVVRTYVPAGSIEEQWDVPALEEALRNEWQLDLALQE
MVNEADTIEADEVLDAVIAASDEAYEAKVAQVGRDAFSGFERSAMLQTLDSRWREHLA
ALEHLRQGIHLRGYAQKNPKQEYKREAFELFAAMLDAVKHEVTRIVMNVQIQTPEQLE
AAAEQYEEQAGHLANVEFRHADFAQATGAEAALADALPRVSPMVPGPHATPGLSLDFA
AGQSSLAARDNPYPKVGRNDPCPCGSGKKYKQCHGRLA"
misc_feature 308843..311362
/locus_tag="RBRH_03247"
/note="preprotein translocase subunit SecA; Reviewed;
Region: PRK12904"
/db_xref="CDD:183826"
misc_feature 309518..309919
/locus_tag="RBRH_03247"
/note="SecA preprotein cross-linking domain; Region:
SecA_PP_bind; smart00958"
/db_xref="CDD:198026"
misc_feature 311606..311662
/locus_tag="RBRH_03247"
/note="SEC-C motif; Region: SEC-C; pfam02810"
/db_xref="CDD:202406"
gene 311761..313002
/locus_tag="RBRH_03246"
/db_xref="GeneID:9987461"
CDS 311761..313002
/locus_tag="RBRH_03246"
/EC_number="2.3.1.35"
/EC_number="2.3.1.1"
/codon_start=1
/transl_table=11
/product="glutamate N-acetyltransferase / amino-acid
acetyltransferase"
/protein_id="YP_004027993.1"
/db_xref="GI:312795071"
/db_xref="GeneID:9987461"
/translation="MAVNFPSIDPASLHPVPGVTLGWAEANLRKPNRKDVLVIAVDDG
ATVSGVFTTNRFCAAPVTVCREHLALARGGAAPIRALLVNTGNANAGTGEPGLAHARD
SCAELARLLRIDAQQVLPFSTGVILEPLPIERLKAGLPQAVAQLAPAHWYEAAQAIMT
TDTLPKAASRQLDIDGHTVTLTGISKGAGMIKPNMATMLGFVATDAAITQPVLDTLVK
DVADQSFNCITVDGDTSTNDSFIVVASARSTLPVITSTQSAAYRALRDALTQLAQTLA
QLIVRDGEGATKFMTVRVEAGRSVDECRQVAYAIGHSPLVKTAFYACDPNLGRLLAAI
GYAGIADLDVSRIELYLDDVLVAKAGGRHPDYREEDGQRVMKQSEITIRVCLARGDAQ
ATLWTCDLSHDYVSINADYRS"
misc_feature 311806..312999
/locus_tag="RBRH_03246"
/note="Ornithine acetyltransferase (OAT) family; also
referred to as ArgJ. OAT catalyzes the first and fifth
steps in arginine biosynthesis, coupling acetylation of
glutamate with deacetylation of N-acetylornithine, which
allows recycling of the acetyl group in...; Region: OAT;
cd02152"
/db_xref="CDD:73147"
misc_feature order(311917..311931,312031..312033,312136..312141,
312328..312330,312340..312342,312451..312462,
312697..312705,312712..312717,312721..312726,
312730..312732,312736..312747,312751..312756,
312763..312774,312829..312831,312958..312966)
/locus_tag="RBRH_03246"
/note="heterotetramer interface [polypeptide binding];
other site"
/db_xref="CDD:73147"
misc_feature order(312127..312132,312238..312243,312316..312318,
312325..312327,312349..312351,312982..312984,
312994..312999)
/locus_tag="RBRH_03246"
/note="active site pocket [active]"
/db_xref="CDD:73147"
misc_feature 312346..312351
/locus_tag="RBRH_03246"
/note="cleavage site"
/db_xref="CDD:73147"
gene 313046..313918
/locus_tag="RBRH_03245"
/db_xref="GeneID:9987460"
CDS 313046..313918
/locus_tag="RBRH_03245"
/codon_start=1
/transl_table=11
/product="ATP-dependent protease subunit"
/protein_id="YP_004027994.1"
/db_xref="GI:312795072"
/db_xref="GeneID:9987460"
/translation="MDKLEQFLTRAEALLERLEAVLPPATPATDWDAAIAFRWRSRQG
RGFLQPVAHPPTIQLSDLQNIDRQKALIEQNTRQFVRRLPANNVLLTGARGTGKSSLI
KACLNRFAPEGLRLIEVDKDDLHDLGDIVEQIASRPERFVVFCDDLSFEEGESGYKAL
KVALDGSIAAQSDNVLIYATSNRRHLLPEYMRDNETYRHTTDGEIHPGEVVEEKISLS
ERFGLWVSFYPFKQDDYLAIVAHWLRHFACSDAQIDAARGDALVWALERGSRSGRVAW
QFARDWSGRRQQAQ"
misc_feature 313274..313612
/locus_tag="RBRH_03245"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature 313295..313624
/locus_tag="RBRH_03245"
/note="ATPases associated with a variety of cellular
activities; Region: AAA; smart00382"
/db_xref="CDD:197690"
misc_feature 313319..313342
/locus_tag="RBRH_03245"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature order(313322..313345,313481..313483,313589..313591)
/locus_tag="RBRH_03245"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature 313469..313486
/locus_tag="RBRH_03245"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
gene 313870..314397
/locus_tag="RBRH_03244"
/db_xref="GeneID:9987459"
CDS 313870..314397
/locus_tag="RBRH_03244"
/EC_number="3.6.1.-"
/codon_start=1
/transl_table=11
/product="7,8-dihydro-8-oxoguanine-triphosphatase"
/protein_id="YP_004027995.1"
/db_xref="GI:312795073"
/db_xref="GeneID:9987459"
/translation="MAVCSGLVRPAAASPMTSERPTMTPDTVAPHDVPQAHAATHTAD
GRRITEVAVGVMLHEDGRFLLAQRPAGKPYEGYWEFPGGKLEPGESVEDALARELHEE
LGVTIADCVRWRILEHDYPHAYVRLFFCKVTRWSGEPSGREGQAFVWQAPPVQVAPLL
PAALPVIDWLDAERG"
misc_feature 314017..314316
/locus_tag="RBRH_03244"
/note="The MutT pyrophosphohydrolase is a prototypical
Nudix hydrolase that catalyzes the hydrolysis of
nucleoside and deoxynucleoside triphosphates (NTPs and
dNTPs) by substitution at a beta-phosphorus to yield a
nucleotide monophosphate (NMP) and inorganic...; Region:
MutT_pyrophosphohydrolase; cd03425"
/db_xref="CDD:72883"
misc_feature order(314020..314022,314116..314121,314125..314127,
314161..314163,314170..314175,314242..314244,
314296..314298)
/locus_tag="RBRH_03244"
/note="active site"
/db_xref="CDD:72883"
misc_feature order(314020..314022,314116..314121,314236..314238,
314242..314244)
/locus_tag="RBRH_03244"
/note="8-oxo-dGMP binding site [chemical binding]; other
site"
/db_xref="CDD:72883"
misc_feature 314116..314184
/locus_tag="RBRH_03244"
/note="nudix motif; other site"
/db_xref="CDD:72883"
misc_feature order(314161..314163,314170..314175)
/locus_tag="RBRH_03244"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:72883"
gene complement(314401..314601)
/locus_tag="RBRH_03243"
/db_xref="GeneID:9987458"
CDS complement(314401..314601)
/locus_tag="RBRH_03243"
/codon_start=1
/transl_table=11
/product="non-essential pilus assembly protein"
/protein_id="YP_004027996.1"
/db_xref="GI:312795074"
/db_xref="GeneID:9987458"
/translation="MTTVVNCPTCGKKVEWKPESRFRPFCSMRCKQIDLGAWATGKYT
IGGDERPADEPHGDPQKPGGLN"
misc_feature complement(314425..314589)
/locus_tag="RBRH_03243"
/note="Domain of unknown function (DUF329); Region:
DUF329; pfam03884"
/db_xref="CDD:202796"
gene complement(314627..315382)
/locus_tag="RBRH_03242"
/db_xref="GeneID:9987457"
CDS complement(314627..315382)
/locus_tag="RBRH_03242"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004027997.1"
/db_xref="GI:312795075"
/db_xref="GeneID:9987457"
/translation="MILYEYPFNERIRTLLRLEDLFERFTFFLTQEDPREHHVALTTL
FEIAEVTGRSDLKSDLMKELERQRQALALFRGNPGIEQGALETVLAEIEQTLAGLAQM
QGKTGQHLADNEWLASIRSRAIIPGGTCRFDLPSYYAWQHSAAEQRRADIMKWAIPLL
PLRDATVIVLRLARESGQAAKVMAMQGSYQQMLSGRTYQLMQVRVASDLRVIPEASAN
KYMLWVRFTAQDGDMRPRAVDVDVPFQLTLCNL"
misc_feature complement(314633..315382)
/locus_tag="RBRH_03242"
/note="hypothetical protein; Provisional; Region:
PRK05287"
/db_xref="CDD:179993"
gene complement(315524..316144)
/locus_tag="RBRH_03241"
/db_xref="GeneID:9987456"
CDS complement(315524..316144)
/locus_tag="RBRH_03241"
/EC_number="2.7.1.24"
/codon_start=1
/transl_table=11
/product="dephospho-CoA kinase"
/protein_id="YP_004027998.1"
/db_xref="GI:312795076"
/db_xref="GeneID:9987456"
/translation="MTMFKVGLTGGIGSGKTTVANAFAAYGVPIVDTDLIAHRVTAPG
GAAIPGIRTQFGATFITAQGALDRARMRELVFSNTQAKQQLEAIVHPLIRIETEREMQ
AASGPYVICVVPLLVEAGNWRERVNRVLVVDCAVQTQVERVMRRNGFTREQVQAIIAR
QATRQTRLAAADDIIVNEADTIEPLLPEIALLHQRYLSLARDSAPS"
misc_feature complement(315542..316138)
/locus_tag="RBRH_03241"
/note="Dephospho-CoA kinase [Coenzyme metabolism]; Region:
CoaE; COG0237"
/db_xref="CDD:30586"
misc_feature complement(315596..316132)
/locus_tag="RBRH_03241"
/note="Dephospho-coenzyme A kinase (DPCK, EC 2.7.1.24)
catalyzes the phosphorylation of dephosphocoenzyme A
(dCoA) to yield CoA, which is the final step in CoA
biosynthesis; Region: DPCK; cd02022"
/db_xref="CDD:30195"
misc_feature complement(order(315662..315664,315800..315805,
315875..315877,316043..316045,316118..316120))
/locus_tag="RBRH_03241"
/note="CoA-binding site [chemical binding]; other site"
/db_xref="CDD:30195"
misc_feature complement(order(315614..315616,315719..315721,
316097..316102,316109..316117))
/locus_tag="RBRH_03241"
/note="ATP-binding [chemical binding]; other site"
/db_xref="CDD:30195"
gene complement(316141..317133)
/locus_tag="RBRH_03240"
/db_xref="GeneID:9987455"
CDS complement(316141..317133)
/locus_tag="RBRH_03240"
/codon_start=1
/transl_table=11
/product="Type 4 prepilin peptidase pilD"
/protein_id="YP_004027999.1"
/db_xref="GI:312795077"
/db_xref="GeneID:9987455"
/translation="MHSFSVIAPHGPGHWIAGFADAFLMLPVAWQYAFACVLGLVIGS
FLTVVVHRVPQMLEHAWQQELAGYLPQNAQHALSAESDGHDAVPNPAPEQRPAPLSQT
DLPRRYNLWVPRSACTACGHTLRLHENIPLLSFITLRGRCSACSTRIRWRYPLIESAC
ALFAALSLAAFGPTPTALIAFAFCAALLAMSAIDLETKLLPDSLTLPLLWAGLLINLH
AVFAPLDAAVIGAAAGYLSLWAVYWLFKLVRGAEGIGYGDFKLFAAIGAWFGWSPLLQ
VILVASVCGAIVGLGATLAKRMRLEEPLPFGPFLAGAAVLTLFGGTPLYRLLGG"
misc_feature complement(316663..317025)
/locus_tag="RBRH_03240"
/note="Bacterial Peptidase A24 N-terminal domain; Region:
DiS_P_DiS; pfam06750"
/db_xref="CDD:203513"
misc_feature complement(316144..316824)
/locus_tag="RBRH_03240"
/note="Type II secretory pathway, prepilin signal
peptidase PulO and related peptidases [Cell motility and
secretion / Posttranslational modification, protein
turnover, chaperones / Intracellular trafficking and
secretion]; Region: PulO; COG1989"
/db_xref="CDD:32172"
misc_feature complement(316264..316554)
/locus_tag="RBRH_03240"
/note="Type IV leader peptidase family; Region:
Peptidase_A24; pfam01478"
/db_xref="CDD:144901"
gene complement(317179..318423)
/locus_tag="RBRH_03239"
/db_xref="GeneID:9987454"
CDS complement(317179..318423)
/locus_tag="RBRH_03239"
/codon_start=1
/transl_table=11
/product="Type IV pilus assembly protein tapC"
/protein_id="YP_004028000.1"
/db_xref="GI:312795078"
/db_xref="GeneID:9987454"
/translation="MMDWRAMQPPIKAASPRRPAMSRFHWRGIGADGRRRRGTLVALD
ARSALERIRRDRIVAVELIEVRARWSPRVRHADLTRATRHLAMLLRSGLSLQPALALV
AQHAGMPLKPLFETVLRDITEGSTLSRALQRHDRVFPAAYWRLVELAEHTGSLDTILA
QLADTRDRVAAQRARLRNALWYPTLILALALGLCALLLAWVVPTFERVFAGFGSQLPR
PTRIVVALSRQLLTHGPAMVAAGGLGIACGMLAWQRSPRFRLHLHALLLRAPLVGPIV
QRVAIARWSHALGQVLDAGIALADGFDAVDGISGNAAMDAATCDIAARVRVGASLADA
MRASTCFPPDVVATIALAEQAGTLGTTLADIGAWNDRLVAERIGLLAQLAEPLIIVGP
GALIAALVVAMYLPIIEMGNIM"
misc_feature complement(317182..318363)
/locus_tag="RBRH_03239"
/note="Type II secretory pathway, component PulF [Cell
motility and secretion / Intracellular trafficking and
secretion]; Region: PulF; COG1459"
/db_xref="CDD:31648"
misc_feature complement(317875..318183)
/locus_tag="RBRH_03239"
/note="Type II secretion system (T2SS), protein F; Region:
T2SF; pfam00482"
/db_xref="CDD:201255"
misc_feature complement(317206..317574)
/locus_tag="RBRH_03239"
/note="Type II secretion system (T2SS), protein F; Region:
T2SF; pfam00482"
/db_xref="CDD:201255"
gene complement(318420..319910)
/locus_tag="RBRH_03238"
/db_xref="GeneID:9987453"
CDS complement(318420..319910)
/locus_tag="RBRH_03238"
/codon_start=1
/transl_table=11
/product="Type 4 pili biogenesis protein pilB
(nuleotide-binding protein)"
/protein_id="YP_004028001.1"
/db_xref="GI:312795079"
/db_xref="GeneID:9987453"
/translation="MARALQARDDTRVSIVLRCPRIASMPHHTLFATVPPSTPTHGAD
LTPMQPSAAQAVPRGPDAHAPSRFTEPVRCAAAPIATVPTPRIAQRARANAHARPSDD
TDAPAVRLLDDLFAQASACRASDIHIEPGRHQWHIRLRIDGRLHRLDNPPAHLRDAVT
TRIKVLARLDIAQRRAPQDGRLRIAVSGAGFDEFRVSTLPTVFGEKVVLRRLDALPDG
LDLTGLGFDATQLCAVQHALRARQGMVLVTGPTGSGKTLTLYTFMRELDRDAFNLCTI
EDPSEIELAGINQVSVNDRAGLGFAAVLRALLRQDPDVIMVGEIRDTETASVAINAAQ
TGHLLLATLHTNDAPATLARLTDLGVEPYNVAAAVKLITAQRLVRRLCSACRLADTPD
PVALRAAGMTAAHVDQALAGCWQSYRPVGCTACRGTGFAGRCAIHQVVPVTAALQQRI
AARTPTHALADAMRAAGLQTLRQSALARVRDGTTSLHEALAVTDDA"
misc_feature complement(318768..319547)
/locus_tag="RBRH_03238"
/note="Type II/IV secretion system protein; Region: T2SE;
pfam00437"
/db_xref="CDD:201225"
misc_feature complement(318612..319427)
/locus_tag="RBRH_03238"
/note="PulE/GspE The type II secretory pathway is the main
terminal branch of the general secretory pathway (GSP).
It is responsible for the export the majority of
Gram-negative bacterial exoenzymes and toxins. PulE is a
cytoplasmic protein of the GSP, which...; Region:
PulE-GspE; cd01129"
/db_xref="CDD:29995"
misc_feature complement(319143..319166)
/locus_tag="RBRH_03238"
/note="Walker A motif; other site"
/db_xref="CDD:29995"
misc_feature complement(order(318954..318959,319077..319082,
319086..319088,319143..319151,319161..319163))
/locus_tag="RBRH_03238"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:29995"
misc_feature complement(318954..318971)
/locus_tag="RBRH_03238"
/note="Walker B motif; other site"
/db_xref="CDD:29995"
gene complement(319973..321289)
/locus_tag="RBRH_03237"
/db_xref="GeneID:9987452"
CDS complement(319973..321289)
/locus_tag="RBRH_03237"
/codon_start=1
/transl_table=11
/product="Magnesium and cobalt efflux protein corC"
/protein_id="YP_004028002.1"
/db_xref="GI:312795080"
/db_xref="GeneID:9987452"
/translation="METLPLWAQISAVVVLLLISGFFSISETAMMALNRHRLKHLAGK
GVMGAKTTQGLLAHTDQLLSVILIGNNLMNVIIPVLTTSIALHTFGNHSAVLSITTGI
VAFLIIVFAEITPKIVGATYPEKIALPASLVIKPLITLARPLVWFVNTLANGILFVLH
INTKGAREDLHMSNDELRSVVLESSSFMPSKHRSILLNLFDLESISVDDVMIPRRRIE
ALDFDAPFDQLVQQLETCYHNKLVVYQGDIDRVLGMLHVRKTLAALHNQEFKREKLRE
LLTQPYFVPSGTPVFQQLQYFQENRHRMALVVNEYGEVQGLVTPEDIIEELIGEFTTT
LPRTASGAAGGWNTQGECIVAGSIPLRELNRRLGLRLPLDGPKTLNGLILERLEAIPE
GDVSLVVSDTRMEVMQIDNQAIRTVKLFRPARLDAAHAAAARQHAR"
misc_feature complement(320030..321277)
/locus_tag="RBRH_03237"
/note="Putative Mg2+ and Co2+ transporter CorB [Inorganic
ion transport and metabolism]; Region: CorB; COG4536"
/db_xref="CDD:34183"
misc_feature complement(320738..321268)
/locus_tag="RBRH_03237"
/note="Domain of unknown function DUF21; Region: DUF21;
pfam01595"
/db_xref="CDD:201879"
misc_feature complement(320312..320644)
/locus_tag="RBRH_03237"
/note="This cd contains two tandem repeats of the
cystathionine beta-synthase (CBS pair) domains associated
with the CorC_HlyC domain. CorC_HlyC is a transporter
associated domain. This small domain is found in Na+/H+
antiporters, in proteins involved in...; Region:
CBS_pair_CorC_HlyC_assoc; cd04590"
/db_xref="CDD:73090"
misc_feature complement(320033..320242)
/locus_tag="RBRH_03237"
/note="Transporter associated domain; Region: CorC_HlyC;
smart01091"
/db_xref="CDD:198159"
gene complement(321310..321717)
/locus_tag="RBRH_03236"
/db_xref="GeneID:9987451"
CDS complement(321310..321717)
/locus_tag="RBRH_03236"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028003.1"
/db_xref="GI:312795081"
/db_xref="GeneID:9987451"
/translation="MLVRARGSRANRCQPGTSAPGCSAPARLPYKSAAHSLAAASAGA
TPAREGDAMTIGVQIDPQAWRAGVDADDAGHAMTPCPAGLGPLSYFSGWIEKDAKHQG
NANNRPDAGASMLPTGLQHGRHRRSDIVDFIVY"
gene complement(322060..322136)
/locus_tag="RBRH_t009"
/db_xref="GeneID:9987450"
tRNA complement(322060..322136)
/locus_tag="RBRH_t009"
/product="tRNA-Pro"
/codon_recognized="CCG"
/db_xref="GeneID:9987450"
gene complement(322167..323225)
/locus_tag="RBRH_03235"
/db_xref="GeneID:9988214"
CDS complement(322167..323225)
/locus_tag="RBRH_03235"
/EC_number="2.5.1.1"
/EC_number="2.5.1.10"
/EC_number="2.5.1.29"
/EC_number="2.5.1.-"
/codon_start=1
/transl_table=11
/product="farnesyl pyrophosphate synthetase /
Geranyltranstransferase / farnesyltransferase / Octaprenyl
diphosphate synthase"
/protein_id="YP_004028004.1"
/db_xref="GI:312795082"
/db_xref="GeneID:9988214"
/translation="MRSTAPVPYNSPVLLRPPFFRFTSLTATTTPSAAATLAPIADDM
QQVNRVIRTRLASDVVLINQIAEYIIGAGGKRLRPALLLLVANALGERSGQRHELAAV
IEFIHTATLLHDDVVDESQLRRGKQTANALFGNAASVLVGDFLYSRAFQMMVACDNLR
VMQILSDATNVIAEGEVLQLLNMHDPDVDQARYMQVIRYKTAKLFEAAAQLGAVIAGA
PPALEAAAAEFGRTIGTAFQIMDDWLDYTGTPESMGKNAGDDLREGKPTLPLIYLIEH
GTAEQAQLARDAIEHGGTDRFDTIFTAINESGALEHTLRCAEAEAQAAARAIFSFPDS
QFKESLLELCSYSASRQS"
misc_feature complement(322170..323108)
/locus_tag="RBRH_03235"
/note="Geranylgeranyl pyrophosphate synthase [Coenzyme
metabolism]; Region: IspA; COG0142"
/db_xref="CDD:30491"
misc_feature complement(322356..323057)
/locus_tag="RBRH_03235"
/note="Trans-Isoprenyl Diphosphate Synthases,
head-to-tail; Region: Trans_IPPS_HT; cd00685"
/db_xref="CDD:173833"
misc_feature complement(order(322431..322433,322446..322448,
322461..322463,322491..322493,322500..322505,
322614..322616,322623..322628,322689..322691,
322698..322700,322854..322859,322872..322877,
322881..322889,322893..322901,322908..322910))
/locus_tag="RBRH_03235"
/note="substrate binding pocket [chemical binding]; other
site"
/db_xref="CDD:173833"
misc_feature complement(322872..322901)
/locus_tag="RBRH_03235"
/note="chain length determination region; other site"
/db_xref="CDD:173833"
misc_feature complement(order(322431..322433,322446..322448,
322461..322463,322491..322493,322500..322505,
322626..322628,322689..322691,322854..322859,
322872..322874,322881..322886))
/locus_tag="RBRH_03235"
/note="substrate-Mg2+ binding site; other site"
/db_xref="CDD:173833"
misc_feature complement(order(322500..322505,322626..322628,
322854..322859,322872..322874,322881..322886))
/locus_tag="RBRH_03235"
/note="catalytic residues [active]"
/db_xref="CDD:173833"
misc_feature complement(order(322626..322628,322689..322691,
322854..322859,322872..322874,322881..322886))
/locus_tag="RBRH_03235"
/note="aspartate-rich region 1; other site"
/db_xref="CDD:173833"
misc_feature complement(order(322425..322439,322446..322463,
322479..322484,322824..322868))
/locus_tag="RBRH_03235"
/note="active site lid residues [active]"
/db_xref="CDD:173833"
misc_feature complement(order(322431..322433,322446..322448,
322461..322463,322491..322493,322500..322505))
/locus_tag="RBRH_03235"
/note="aspartate-rich region 2; other site"
/db_xref="CDD:173833"
gene complement(323324..323470)
/locus_tag="RBRH_04052"
/db_xref="GeneID:9987449"
CDS complement(323324..323470)
/locus_tag="RBRH_04052"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028005.1"
/db_xref="GI:312795083"
/db_xref="GeneID:9987449"
/translation="MYCLPPVFMTAYIVEPHLKSGPDPDPFICFEHAFRALRAFLRTT
HRNA"
gene 323433..323744
/locus_tag="RBRH_03234"
/db_xref="GeneID:9988026"
CDS 323433..323744
/locus_tag="RBRH_03234"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L21"
/protein_id="YP_004028006.1"
/db_xref="GI:312795084"
/db_xref="GeneID:9988026"
/translation="MYAVIKTGGKQYKVAAGEKLKVEQIPADIGAEITLDQVLAVGEG
ESIKFGTPLVGGASVKATVVSHGRHAKVTIFKMRRRKHYQKHGGHRQNYTELRIDAIN
A"
misc_feature 323433..>323741
/locus_tag="RBRH_03234"
/note="50S ribosomal protein L21/unknown domain fusion
protein; Provisional; Region: PRK12278"
/db_xref="CDD:171362"
misc_feature 323433..323741
/locus_tag="RBRH_03234"
/note="50S ribosomal protein L21; Validated; Region: rplU;
PRK05573"
/db_xref="CDD:180138"
gene 323763..324023
/locus_tag="RBRH_03233"
/db_xref="GeneID:9987448"
CDS 323763..324023
/locus_tag="RBRH_03233"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L25"
/protein_id="YP_004028007.1"
/db_xref="GI:312795085"
/db_xref="GeneID:9987448"
/translation="MAHKKAGGSSRNGRDSESKRLGVKVFGGQAINAGGIIVRQRGTR
MHAGDNVGIGKDHTLFALTDGHVRFAVKGAAKKHIVSVVPAA"
misc_feature 323763..324011
/locus_tag="RBRH_03233"
/note="50S ribosomal protein L27; Validated; Region: rpmA;
PRK05435"
/db_xref="CDD:180080"
gene 324204..324305
/locus_tag="RBRH_04051"
/db_xref="GeneID:9987447"
CDS 324204..324305
/locus_tag="RBRH_04051"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028008.1"
/db_xref="GI:312795086"
/db_xref="GeneID:9987447"
/translation="MSANKIAATAARSAAGGSRQTAQAERSNWNEVH"
gene 324292..325428
/locus_tag="RBRH_03231"
/db_xref="GeneID:9988025"
CDS 324292..325428
/locus_tag="RBRH_03231"
/codon_start=1
/transl_table=11
/product="GTP-binding protein CgtA"
/protein_id="YP_004028009.1"
/db_xref="GI:312795087"
/db_xref="GeneID:9988025"
/translation="MKFIDEARIEVIAGDGGDGSASMRREKFVPFGGPDGGDGGRGGS
VYAVADRNINTLIDYRYAKKHQARNGENGRGSDCYGKAGEDITLRMPVGTMITDKDTG
ELIADLTEHDQRVLLAKGGAGGLGNLHFKSSTNRAPRQKTEGKPGERRMLRLELKVLA
DVGLLGMPNAGKSTFIASVSNAKPKIADYPFTTLAPNLGVVRVGPAKSFVIADIPGLI
EGAAEGAGLGHQFLRHLQRTGILLHLVDLAPFDDGVDPVAEAGAIVNELRKYDEALYR
KPRWLVLNKVDMIAEHEREARVADFVKRFGWQGPVFQISALTGLGCENMCYAVYDYLS
ETGLAARVQHAEDLAADVRFRDDAQASDDAQASDGATQPGADTQ"
misc_feature 324295..325299
/locus_tag="RBRH_03231"
/note="GTPase CgtA; Reviewed; Region: obgE; PRK12299"
/db_xref="CDD:183417"
misc_feature 324298..324765
/locus_tag="RBRH_03231"
/note="GTP1/OBG; Region: GTP1_OBG; pfam01018"
/db_xref="CDD:110047"
misc_feature 324769..325290
/locus_tag="RBRH_03231"
/note="Obg GTPase; Region: Obg; cd01898"
/db_xref="CDD:206685"
misc_feature 324787..324810
/locus_tag="RBRH_03231"
/note="G1 box; other site"
/db_xref="CDD:206685"
misc_feature order(324796..324813,325141..325146,325150..325152,
325234..325239)
/locus_tag="RBRH_03231"
/note="GTP/Mg2+ binding site [chemical binding]; other
site"
/db_xref="CDD:206685"
misc_feature 324832..324879
/locus_tag="RBRH_03231"
/note="Switch I region; other site"
/db_xref="CDD:206685"
misc_feature 324868..324870
/locus_tag="RBRH_03231"
/note="G2 box; other site"
/db_xref="CDD:206685"
misc_feature 324928..324939
/locus_tag="RBRH_03231"
/note="G3 box; other site"
/db_xref="CDD:206685"
misc_feature order(324937..324960,324967..325005)
/locus_tag="RBRH_03231"
/note="Switch II region; other site"
/db_xref="CDD:206685"
misc_feature 325141..325152
/locus_tag="RBRH_03231"
/note="G4 box; other site"
/db_xref="CDD:206685"
misc_feature 325234..325242
/locus_tag="RBRH_03231"
/note="G5 box; other site"
/db_xref="CDD:206685"
gene 325425..326600
/locus_tag="RBRH_03230"
/db_xref="GeneID:9987446"
CDS 325425..326600
/locus_tag="RBRH_03230"
/EC_number="2.7.2.11"
/codon_start=1
/transl_table=11
/product="glutamate 5-kinase"
/protein_id="YP_004028010.1"
/db_xref="GI:312795088"
/db_xref="GeneID:9987446"
/translation="MIAAAAQYDAKQEYRGGKAMRSIIADAKRLVVKVGSSLVTNDGR
GLDHDAIGQWAAQIAALRQQGKDVVLVSSGAIAEGMQRLGWSRRPREIAELQAAAAVG
QMGLAQVYESRFAEYSIRTAQILLTHADLADRERYLNARSTLLTLLRLGVVPIINEND
TVVTGEIKFGDNDTLGALVANLIEGDALVILTDQCGLYTADPRKNPAATLVQQADAGD
PALEAMAGGAGTSIGRGGMLTKILAAKRAAHSGADTVIASGREPHVLVRLAAAEPIGT
QLIARTARMAARKQWVADHLQVRGHVVIDAGALEKLTSEGKSLLPVGIVDVQGIFARG
EVIACLDEAGREVARGLTNYSSAEVRLIRRHPSAQIESILGYMLEPELIHRDNLVML"
misc_feature 325482..326597
/locus_tag="RBRH_03230"
/note="gamma-glutamyl kinase; Provisional; Region:
PRK05429"
/db_xref="CDD:180076"
misc_feature 325509..326252
/locus_tag="RBRH_03230"
/note="AAK_G5K_ProB: Glutamate-5-kinase (G5K) catalyzes
glutamate-dependent ATP cleavage; G5K transfers the
terminal phosphoryl group of ATP to the gamma-carboxyl
group of glutamate, in the first and controlling step of
proline (and, in mammals, ornithine)...; Region:
AAK_G5K_ProB; cd04242"
/db_xref="CDD:58608"
misc_feature order(325533..325535,325998..326006,326013..326018,
326124..326126,326130..326132,326142..326144)
/locus_tag="RBRH_03230"
/note="nucleotide binding site [chemical binding]; other
site"
/db_xref="CDD:58608"
misc_feature order(325608..325613,325620..325622,325710..325712,
325722..325724,325791..325793,325797..325799,
325839..325844,325860..325862,325869..325871,
325899..325901,325905..325910)
/locus_tag="RBRH_03230"
/note="homotetrameric interface [polypeptide binding];
other site"
/db_xref="CDD:58608"
misc_feature 325644..325667
/locus_tag="RBRH_03230"
/note="putative phosphate binding site [ion binding];
other site"
/db_xref="CDD:58608"
misc_feature order(325647..325649,325902..325904,325935..325937)
/locus_tag="RBRH_03230"
/note="putative allosteric binding site; other site"
/db_xref="CDD:58608"
misc_feature 326322..326546
/locus_tag="RBRH_03230"
/note="PUA domain; Region: PUA; pfam01472"
/db_xref="CDD:201816"
gene complement(326673..327407)
/locus_tag="RBRH_03229"
/db_xref="GeneID:9987445"
CDS complement(326673..327407)
/locus_tag="RBRH_03229"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028011.1"
/db_xref="GI:312795089"
/db_xref="GeneID:9987445"
/translation="MIAASVCLAAHRRVGRPPRAALRRFASGSRPLCFNTPPFVPGTR
LLKRVCPPARPSRPSSRRIAALIGTIAAALLGACSSPSPDQGPKPGQDFTYLLERTQN
WVENQVDKLAPMPRAADLLPFEVSATTDLQFAVDAASVSVGTDGVVRYTIVITSPQGA
RNVYYEGLRCETYEWRRYAAADDSGEQWDRGAANGWRRIENSQLNAYQAALYQDYMCA
NKIPQGNAASIVQNIRYKRIAASRYQ"
misc_feature complement(326703..327125)
/locus_tag="RBRH_03229"
/note="CNP1-like family; Region: CNP1; pfam08750"
/db_xref="CDD:149722"
gene complement(327404..328225)
/locus_tag="RBRH_03227"
/db_xref="GeneID:9987444"
CDS complement(327404..328225)
/locus_tag="RBRH_03227"
/EC_number="3.6.1.17"
/codon_start=1
/transl_table=11
/product="bis(5'-nucleosyl)-tetraphosphatase"
/protein_id="YP_004028012.1"
/db_xref="GI:312795090"
/db_xref="GeneID:9987444"
/translation="MPMKKREAFILEGFQNEGAGIPDSSRVARRPLTVYNQSNFKGFE
GGCMLDREGFRPNVGIILLNARNEVFWGKRLREHSWQFPQGGIKYGETPLQAMFRELR
EETGLRPEHVKVIGRTRDWLRYEVPDKYIKREVRGHYRGQKQIWFLLRMIGRDCDICL
RATDHPEFDAWRWNSYWVPLDAVIEFKRDVYQMALTELSRFVRRQPGRHARSALHHGA
RPSKVKAKVVTVSIETVCSNIEPGAELDCGRAATAVLDVAAATLVVEPVSTKPRP"
misc_feature complement(327632..328069)
/locus_tag="RBRH_03227"
/note="Diadenosine tetraphosphate (Ap4A) hydrolase is a
member of the Nudix hydrolase superfamily. Members of this
family are well represented in a variety of prokaryotic
and eukaryotic organisms. Phylogenetic analysis reveals
two distinct subgroups where plant...; Region:
Ap4A_hydrolase_plant_like; cd03671"
/db_xref="CDD:72891"
misc_feature complement(order(327665..327670,327674..327676,
327800..327802,327824..327829,327836..327838,
327848..327850,327854..327856,327914..327919,
327926..327928,327971..327976,327983..327985,
327995..327997,328004..328006,328055..328057))
/locus_tag="RBRH_03227"
/note="putative active site [active]"
/db_xref="CDD:72891"
misc_feature complement(order(327665..327670,327674..327676,
327800..327802,327824..327829,327836..327838,
327848..327850,327854..327856,327971..327976,
327983..327985,327995..327997,328004..328006,
328055..328057))
/locus_tag="RBRH_03227"
/note="Ap4A binding site [chemical binding]; other site"
/db_xref="CDD:72891"
misc_feature complement(327905..327973)
/locus_tag="RBRH_03227"
/note="nudix motif; other site"
/db_xref="CDD:72891"
misc_feature complement(order(327914..327919,327926..327928))
/locus_tag="RBRH_03227"
/note="putative metal binding site [ion binding]; other
site"
/db_xref="CDD:72891"
gene 328164..329933
/locus_tag="RBRH_03226"
/db_xref="GeneID:9987443"
CDS 328164..329933
/locus_tag="RBRH_03226"
/EC_number="6.1.1.15"
/codon_start=1
/transl_table=11
/product="prolyl-tRNA synthetase"
/protein_id="YP_004028013.1"
/db_xref="GI:312795091"
/db_xref="GeneID:9987443"
/translation="MPAPSFWNPSRMKASRFFIGTLKEAPADAEIVSHQLMVRAGMIR
RVAGGIYNYMPIGLRSIRKVEAIVREEMNRAGAVELLMPAVQPAELWQESSRWEQYGP
ELLRVKDRHDRDFVVGPTHEEVVTDIARKEIKSYRQMPVNFYQVQTKFRDEIRPRFGV
MRGREFIMKDAYSFDRDRAGLQLSYQKMYDAYVRIFTRLGLEFRAVAADNGAIGGTGS
HEFHVIAATGEDAIAYCPGSDYAANVEAAEAVSLIASRAAPSEPLTKKATPGKAKCEQ
VADYLSIALERTIKSIALAVDNEGADPTIWLLLLRGDHELNEIKAGKIPGLAGYRFAT
EQEIVDWFGAPPGYLGPLNTRKPVRVVADRTVANMSDFVVGSNEMGYHTTGVNWGRDL
PEPEVADLRNVRKGDPSPDGRGELDLCRGIEVGHVFQLGTKYSEAMGATFLDENGKPA
PMMMGCYGIGITRILGAAIEQNFDERGIIWPEAIAPFHLVLCPMGYERSDAVREQAHK
LYDELLGAGMDVILDDRGERPGVMFADWELIGVPHRLVIGERGLKEGKIEYQGRRDVE
PTLLPLEQAAAWVVERVRAALAR"
misc_feature 328197..329885
/locus_tag="RBRH_03226"
/note="prolyl-tRNA synthetase; Provisional; Region:
PRK09194"
/db_xref="CDD:181689"
misc_feature 328245..>328841
/locus_tag="RBRH_03226"
/note="Prolyl-tRNA synthetase (ProRS) class II core
catalytic domain. ProRS is a homodimer. It is responsible
for the attachment of proline to the 3' OH group of ribose
of the appropriate tRNA. This domain is primarily
responsible for ATP-dependent formation of...; Region:
ProRS_core_prok; cd00779"
/db_xref="CDD:73229"
misc_feature order(328293..328298,328317..328328,328347..328349,
328398..328406,328410..328415,328473..328475,
328479..328493,328545..328547,328605..328607,
328656..328658)
/locus_tag="RBRH_03226"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:73229"
misc_feature 328392..328415
/locus_tag="RBRH_03226"
/note="motif 1; other site"
/db_xref="CDD:73229"
misc_feature order(328521..328523,328527..328529,328614..328616,
328620..328622,328644..328652,328659..328661,
328665..328667,328671..328673)
/locus_tag="RBRH_03226"
/note="active site"
/db_xref="CDD:73229"
misc_feature 328611..328622
/locus_tag="RBRH_03226"
/note="motif 2; other site"
/db_xref="CDD:73229"
misc_feature 328872..329363
/locus_tag="RBRH_03226"
/note="INS is an amino acid-editing domain inserted (INS)
into the bacterial class II prolyl-tRNA synthetase (ProRS)
however, this CD is not exclusively bacterial. It is also
found at the N-terminus of the eukaryotic/archaea-like
ProRS's of yeasts and...; Region: ProRS-INS; cd04334"
/db_xref="CDD:88585"
misc_feature order(329031..329033,329202..329207,329286..329288)
/locus_tag="RBRH_03226"
/note="putative deacylase active site [active]"
/db_xref="CDD:88585"
misc_feature <329406..329576
/locus_tag="RBRH_03226"
/note="Class II tRNA amino-acyl synthetase-like catalytic
core domain. Class II amino acyl-tRNA synthetases (aaRS)
share a common fold and generally attach an amino acid to
the 3' OH of ribose of the appropriate tRNA. PheRS is an
exception in that it attaches...; Region:
class_II_aaRS-like_core; cl00268"
/db_xref="CDD:206944"
misc_feature order(329424..329429,329439..329441,329529..329534,
329538..329543,329550..329552)
/locus_tag="RBRH_03226"
/note="active site"
/db_xref="CDD:29813"
misc_feature order(329541..329543,329550..329552)
/locus_tag="RBRH_03226"
/note="motif 3; other site"
/db_xref="CDD:29813"
misc_feature 329619..329885
/locus_tag="RBRH_03226"
/note="ProRS Prolyl-anticodon binding domain, short
version found predominantly in bacteria. ProRS belongs to
class II aminoacyl-tRNA synthetases (aaRS). This alignment
contains the anticodon binding domain, which is
responsible for specificity in tRNA-binding; Region:
ProRS_anticodon_short; cd00861"
/db_xref="CDD:29801"
misc_feature order(329643..329648,329763..329765,329781..329783,
329805..329807,329835..329837,329841..329843)
/locus_tag="RBRH_03226"
/note="anticodon binding site; other site"
/db_xref="CDD:29801"
gene 329946..330542
/locus_tag="RBRH_03225"
/db_xref="GeneID:9987442"
CDS 329946..330542
/locus_tag="RBRH_03225"
/codon_start=1
/transl_table=11
/product="MarC family integral membrane protein"
/protein_id="YP_004028014.1"
/db_xref="GI:312795092"
/db_xref="GeneID:9987442"
/translation="MQYTFLSATVLLILITDPLGNIPLFINVLRKVERQRRPKVILRE
VTIAFVILLVFMIAGDAFLRMMHLTDLSLRLAGGIVLFLIALRMIFPHAEGPSGSEPL
SEPLIVPLAIPALAGPSAIATVMLLTSHAPGKMLEWIGALTVTMAVCAIVLLLAEKIQ
RWIGVRTVAAFERLMGLVLVAISVEMILEGIRIFARQL"
misc_feature 329961..330527
/locus_tag="RBRH_03225"
/note="MarC family integral membrane protein; Region:
MarC; cl00919"
/db_xref="CDD:186259"
gene complement(330596..331186)
/locus_tag="RBRH_03224"
/db_xref="GeneID:9987441"
CDS complement(330596..331186)
/locus_tag="RBRH_03224"
/EC_number="2.4.2.8"
/codon_start=1
/transl_table=11
/product="hypoxanthine-guanine phosphoribosyltransferase"
/protein_id="YP_004028015.1"
/db_xref="GI:312795093"
/db_xref="GeneID:9987441"
/translation="MIHTLSIRPLAKIPMNREEALDIFRHSEEIVSSADVAASIQQMA
VAIHDAMRDEFPLVLSVMGGAAVFTGMLLPHLNFPLEFDYIHLTRYRNTTRGHDMQWR
VAPAESVKDRVVLVLDDILDEGETMAAIRDRIIEKGARRFASAVLCEKLIAKPKPLRP
DFCGVQVPDRYVFGCGMDVNGYWRNLSAIRALKGDA"
misc_feature complement(330668..331069)
/locus_tag="RBRH_03224"
/note="Phosphoribosyl transferase (PRT)-type I domain;
Region: PRTases_typeI; cd06223"
/db_xref="CDD:206754"
misc_feature complement(order(330725..330727,330809..330823,
330827..330835,330995..330997,331001..331003))
/locus_tag="RBRH_03224"
/note="active site"
/db_xref="CDD:206754"
gene complement(331245..332687)
/locus_tag="RBRH_03223"
/db_xref="GeneID:9987440"
CDS complement(331245..332687)
/locus_tag="RBRH_03223"
/codon_start=1
/transl_table=11
/product="SIGNAL RECOGNITION PARTICLE, SUBUNIT FFH/SRP54"
/protein_id="YP_004028016.1"
/db_xref="GI:312795094"
/db_xref="GeneID:9987440"
/translation="MRLDAPGPRHPPGLASRRGESHVTSMLDNLTQRMARVVKTLRGE
ARLTEANTQEMLREVRLALLEADVALPVVREFIAKVREKALGEEVISSLTPGQALVGV
VQRELTAVIGGDYEGKAAELNLAVTPPAVILMAGLQGAGKTTTVGKLAKLLREMQKKK
VLTVSCDVYRPAAIAQLKTVTEQVGADFFPSQPDQKPLDIARDALDWAKRHYHDVLIV
DTAGRLGIDEAMMQEIAALHAQLKPAETLFVVDAMLGQDAVNTAKAFNDALPLTGVVL
TKLDGDSRGGAALSVRHVTGRPIKFVGVGEKLDGLETFYPERMANRILGMGDILALVE
EAQRGVDVQAAQKLAEKVKKGGAFDLNDFRAQLSQMKKMGGLSMLMDKLPAQFQQAAG
NADMSQAEKQMHRMEGIINSMTPAERAKPELIKASRKRRIATGAGVQVQEVNRMLNQF
EQMRGMMKKLKGGNLQKMMRGMKGMLPGLR"
misc_feature complement(331266..332612)
/locus_tag="RBRH_03223"
/note="signal recognition particle protein; Provisional;
Region: PRK10867"
/db_xref="CDD:182793"
misc_feature complement(332358..332582)
/locus_tag="RBRH_03223"
/note="SRP54-type protein, helical bundle domain; Region:
SRP54_N; smart00963"
/db_xref="CDD:198031"
misc_feature complement(331779..332300)
/locus_tag="RBRH_03223"
/note="The signal recognition particle (SRP) mediates the
transport to or across the plasma membrane in bacteria and
the endoplasmic reticulum in eukaryotes. SRP recognizes
N-terminal sighnal sequences of newly synthesized
polypeptides at the ribosome. The...; Region: SRP;
cd03115"
/db_xref="CDD:48379"
misc_feature complement(332259..332282)
/locus_tag="RBRH_03223"
/note="P loop; other site"
/db_xref="CDD:48379"
misc_feature complement(order(331845..331850,331857..331859,
332022..332024,332187..332189))
/locus_tag="RBRH_03223"
/note="GTP binding site [chemical binding]; other site"
/db_xref="CDD:48379"
misc_feature complement(331317..331616)
/locus_tag="RBRH_03223"
/note="Signal peptide binding domain; Region: SRP_SPB;
pfam02978"
/db_xref="CDD:202493"
gene 332741..333667
/locus_tag="RBRH_03222"
/db_xref="GeneID:9987439"
CDS 332741..333667
/locus_tag="RBRH_03222"
/codon_start=1
/transl_table=11
/product="CcsA-like protein"
/protein_id="YP_004028017.1"
/db_xref="GI:312795095"
/db_xref="GeneID:9987439"
/translation="MHIVLYALTALLYGGLGVAAWRSYRHAHPHGTLLATAPAAALAA
APGRVAGTGTSPVARAMLFAALVLHGVLLHMTIFPADAMVFGFAFALSAMLWLGAGIY
WIESFFFRLDGLRLLLMPIACVATLLPLLFGGVHVLAYAADPLFKVHFVLANVAYGLL
AIAALHAILMLLVERRLHALRGVAGRRTPGPPARDWLSSWFDTLPPLLTLEKLLFRLI
AAGFVLLTLALISGVWFSEQLIAQAIKLDHKTVFAFVSWIMFGALLVGRHRRGWRGRT
ALRWVLASFAALLLAYVGSRFVLEVLLHRAVV"
misc_feature 332924..333655
/locus_tag="RBRH_03222"
/note="Cytochrome C assembly protein; Region:
Cytochrom_C_asm; cl00504"
/db_xref="CDD:212230"
gene 333727..334068
/locus_tag="RBRH_03221"
/db_xref="GeneID:9987438"
CDS 333727..334068
/locus_tag="RBRH_03221"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028018.1"
/db_xref="GI:312795096"
/db_xref="GeneID:9987438"
/translation="MARILFWLFVILAIQWLWRQVARRDRAHVSHGSEAGRESTRPQA
NRSRADGATGTRRTGGAGGGALPEAIVRCAQCGVHVPVSETVSVEGQRFCSNEHAARY
AARSARRDNAR"
gene 334058..334786
/locus_tag="RBRH_03220"
/db_xref="GeneID:9987437"
CDS 334058..334786
/locus_tag="RBRH_03220"
/EC_number="3.5.1.28"
/codon_start=1
/transl_table=11
/product="Anhydro-N-acetylmuramyl-tripeptide amidase"
/protein_id="YP_004028019.1"
/db_xref="GI:312795097"
/db_xref="GeneID:9987437"
/translation="MRGERAMCATQRSVNDDAAATSCAVCPTTGSMTASMTGLAAGMP
PGEGAAVPARIVVDGLGWARPAQHTPCANCDARPTGVEPTLVVVHNISLPPGQFGGDA
VAALFLNQLDCDAHPYYTRLRGLRVSAHFFVRRDGKLLQFVSCNERAWHAGASNFAGR
ERCNDFSIGIELEGSDEHVFEAPQYDTLTRLCAALCERYPITALAGHADIAPGRKTDP
GPHFDWHRLRAQLALPATFFPYLR"
misc_feature 334232..>334777
/locus_tag="RBRH_03220"
/note="N-acetyl-anhydromuramyl-L-alanine amidase [Cell
envelope biogenesis, outer membrane]; Region: ampD;
COG3023"
/db_xref="CDD:32839"
misc_feature 334304..334720
/locus_tag="RBRH_03220"
/note="Peptidoglycan recognition proteins (PGRPs) are
pattern recognition receptors that bind, and in certain
cases, hydrolyze peptidoglycans (PGNs) of bacterial cell
walls. PGRPs have been divided into three classes: short
PGRPs (PGRP-S), that are small (20...; Region: PGRP;
cd06583"
/db_xref="CDD:133475"
misc_feature order(334322..334324,334442..334444,334676..334678,
334700..334702,334706..334708)
/locus_tag="RBRH_03220"
/note="amidase catalytic site [active]"
/db_xref="CDD:133475"
misc_feature order(334322..334324,334676..334678,334706..334708)
/locus_tag="RBRH_03220"
/note="Zn binding residues [ion binding]; other site"
/db_xref="CDD:133475"
misc_feature order(334325..334330,334430..334432,334442..334444,
334484..334486,334505..334510,334547..334549,
334676..334678,334688..334690,334700..334708)
/locus_tag="RBRH_03220"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:133475"
gene 334971..338111
/locus_tag="RBRH_03219"
/db_xref="GeneID:9987436"
CDS 334971..338111
/locus_tag="RBRH_03219"
/EC_number="1.17.4.1"
/codon_start=1
/transl_table=11
/product="ribonucleoside-diphosphate reductase subunit
alpha"
/protein_id="YP_004028020.1"
/db_xref="GI:312795098"
/db_xref="GeneID:9987436"
/translation="MWFSAALHFQRQRRIAFSDIVFRGAAARCQYAVPRPARFKNADS
PHDTRSGALPMQTTENVTSQQPSAAAGLPHGGGAAHGARALAPQATLADYKVIRRNGS
VVSFEPSKIAIAVTKAFLAVNGGQGAASARVRESVETLTQAVVRALVRSRPNGGTFHI
EDIQDQVELALMRAGEHNVARAYVLYREKRAAERAHEVAQQPAQGGLNVNDNGIVRPL
DLAALRNVITAACDGLGEAVSAEPIVAETVKNLYDGVPLSQVYDSAILAARTMIEKEP
AYSQVTARLLLHTIRREILGEEVLQSEMGARYAEYFPQFLKRGVEAELLDEKLLQFDL
KKLGDALDASRDLKFGYLGLQTLYDRYFLHVDGQRIEMPQAFFMRVAMGLALNEIDRE
ARAIEFYNVLSTFDFMSSTPTLFNSGTRRSQLSSCYLTTVADDLEGIYEALKENALLS
KFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGGKRKGAVCAYL
ETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVIEGGDWTLFSPSSCPDL
HDKFGAEFEQAYVAYEEKAARGELKLFKKIPAAQLWRKMLGMLFETGHPWITFKDPCX
VRSPQQHVGVVHSSNLCTEITLNTSDNEIAVCNLGSVNLVAHMKQGADXGYVLDHDKL
KRTISVAMRMLDNVIDINYYAVAKARNSNLKHRPVGMGIMGFQDCLHLLRTPYASQQA
VEFADRSMEAICYYAYWASTELASERGRYSSYRGSLWDRGILPQDTLKLLADSRGGYV
EVDSSETMDWAALRERIATHGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSN
LSGEFTVVNEYLVRDLKARGLWDEVMVADLKYFDGSLARIDRIPADLRETYATAFEVD
PKWLVEAAARRQKWIDQAQSLNIYMAGASGKKLDEIYKLAWLRGLKTTYYLRTIAATH
VEKSTVAHGALNAVPSSDGGVGAMHGAGGVSGSATARNAGVHAAADAGSQDEIAGPVC
MLRPGDAGFDECEACQ"
misc_feature 335241..338108
/locus_tag="RBRH_03219"
/note="ribonucleotide-diphosphate reductase subunit alpha;
Validated; Region: PRK07207"
/db_xref="CDD:180884"
misc_feature 335253..335540
/locus_tag="RBRH_03219"
/note="ATP cone domain; Region: ATP-cone; pfam03477"
/db_xref="CDD:202657"
misc_feature 336087..337871
/locus_tag="RBRH_03219"
/note="Class I ribonucleotide reductase; Region: RNR_I;
cd01679"
/db_xref="CDD:153088"
misc_feature order(336201..336206,336246..336251,336333..336335,
336885..336887,336891..336893,336897..336899,
336942..336944,337455..337472)
/locus_tag="RBRH_03219"
/note="active site"
/db_xref="CDD:153088"
misc_feature order(336237..336239,336276..336281,336288..336290,
336297..336302,336309..336314,336321..336323,
336366..336368,336402..336404,336414..336419,
336423..336428,336435..336440,336447..336461)
/locus_tag="RBRH_03219"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:153088"
misc_feature order(336249..336251,336885..336887,336891..336893,
336897..336899,336936..336938,337857..337862)
/locus_tag="RBRH_03219"
/note="catalytic residues [active]"
/db_xref="CDD:153088"
misc_feature order(336270..336278,336285..336287,336321..336323,
336360..336362,336402..336404,336417..336419)
/locus_tag="RBRH_03219"
/note="effector binding site; other site"
/db_xref="CDD:153088"
misc_feature order(336597..336599,336606..336611,336615..336623,
336777..336779,336798..336800,337797..337805,
337809..337814,337824..337829,337833..337838)
/locus_tag="RBRH_03219"
/note="R2 peptide binding site; other site"
/db_xref="CDD:153088"
gene 338251..338493
/locus_tag="RBRH_03218"
/db_xref="GeneID:9987435"
CDS 338251..338493
/locus_tag="RBRH_03218"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028021.1"
/db_xref="GI:312795099"
/db_xref="GeneID:9987435"
/translation="MSGGHAHGRRGECDEMDGALAAPIDTKQCVDPGRDATDAKTLTI
ISIKVLYEGLNARSKECFSSANSFIADEKMVQTDLN"
gene 338490..339740
/locus_tag="RBRH_03217"
/db_xref="GeneID:9987434"
CDS 338490..339740
/locus_tag="RBRH_03217"
/EC_number="1.17.4.1"
/codon_start=1
/transl_table=11
/product="ribonucleoside-diphosphate reductase subunit
beta"
/protein_id="YP_004028022.1"
/db_xref="GI:312795100"
/db_xref="GeneID:9987434"
/translation="MMVTFMLNWDDEITAVTPPSVPQPTVRETTATGAVASSSGYAAQ
AADTPAPLAQDSFTRDVAVAPDQQSNASPAPAPEARVNVADKRIINGKTDVNQLVPFK
YKWAWEKYLAGCANHWMPQEINMSRDIALWKDPNGLTDDERRIVKRNLGFFVTADSLA
ANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAYQYIVESLGLDEGEIFNAYHEVSS
IRAKDEFLIPFIHTLTDPSFKTGTLEADQKLLKSLIVFACVMEGLFFYVGFTQILALG
RQNKMTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTPAFREEICGLFKHAVE
LEYRYAEDTMPRGVLGLNAGMFKSYLRFICNRRCQQIGLEPLFPNEENPFPWMSEMID
LKKERNFFETRVIEYQTGGALSWE"
misc_feature 338775..339665
/locus_tag="RBRH_03217"
/note="Ribonucleotide Reductase, R2/beta subunit,
ferritin-like diiron-binding domain; Region: RNRR2;
cd01049"
/db_xref="CDD:153108"
misc_feature order(338775..338777,338808..338810,338829..338831,
339033..339038,339045..339047,339054..339059,
339066..339068,339075..339077,339117..339122,
339129..339131)
/locus_tag="RBRH_03217"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:153108"
misc_feature order(338841..338843,338958..338960,339051..339053,
339060..339062,339072..339074,339366..339371,
339381..339383)
/locus_tag="RBRH_03217"
/note="putative radical transfer pathway; other site"
/db_xref="CDD:153108"
misc_feature order(338958..338960,339051..339053,339060..339062,
339270..339272,339372..339374,339381..339383)
/locus_tag="RBRH_03217"
/note="diiron center [ion binding]; other site"
/db_xref="CDD:153108"
misc_feature 339072..339074
/locus_tag="RBRH_03217"
/note="tyrosyl radical; other site"
/db_xref="CDD:153108"
gene 339904..340152
/locus_tag="RBRH_03216"
/db_xref="GeneID:9987433"
CDS 339904..340152
/locus_tag="RBRH_03216"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028023.1"
/db_xref="GI:312795101"
/db_xref="GeneID:9987433"
/translation="MGKLPPEKPSAAVSCAGLLQIIRRQRCRSCLGARSRWVGPVRLA
AFISVSRRQVRTPMNNPLRSSRVEKTRWREAGFDEGCL"
gene 340103..340744
/locus_tag="RBRH_03215"
/db_xref="GeneID:9987432"
CDS 340103..340744
/locus_tag="RBRH_03215"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028024.1"
/db_xref="GI:312795102"
/db_xref="GeneID:9987432"
/translation="MKKRVGGKRVLTKGVCNSHLNLKEKKMVTAKKKPAAKKAAAKPA
VKKVAAKKAAPAKKATPAKKAAPAKKVAAKKVAAKKVAAKKAAPAKKVAAKKVAAKKA
APAKKVTAKKVAVKKVAAKKAAPAKKAAPTKKAAVRKVAAKKAPAKKAAAAKKAPAKK
AAAKKPAAKKAAAKKAAPAPAAPATPTPAAQANAVKTALNPAAAWPFPTGSRP"
gene complement(340850..341347)
/locus_tag="RBRH_03214"
/db_xref="GeneID:9987431"
CDS complement(340850..341347)
/locus_tag="RBRH_03214"
/codon_start=1
/transl_table=11
/product="outer membrane lipoprotein"
/protein_id="YP_004028025.1"
/db_xref="GI:312795103"
/db_xref="GeneID:9987431"
/translation="MNYGRATMMINRHVTLVVMLSASLSLAACFTPAGSADVYTASQA
QREQTVRMGTVESVRAVHIAADNEGGAALGTFGGGALGAVAGSSIGGGRGSILTGIIG
GIAGAVAGNTVAQQAGTSNGLEITVRLDNGDLRSITQAATGEAFRAGDRVRLLSAGGV
TRVTH"
misc_feature complement(340853..341245)
/locus_tag="RBRH_03214"
/note="Glycine zipper 2TM domain; Region: Rick_17kDa_Anti;
cl10470"
/db_xref="CDD:209149"
gene complement(341344..342282)
/locus_tag="RBRH_03213"
/db_xref="GeneID:9987430"
CDS complement(341344..342282)
/locus_tag="RBRH_03213"
/EC_number="2.7.1.20"
/codon_start=1
/transl_table=11
/product="adenosine kinase"
/protein_id="YP_004028026.1"
/db_xref="GI:312795104"
/db_xref="GeneID:9987430"
/translation="MATLICGSLAYDNIMMFEGHFREHILPDQVHILNVSFLVPSMRR
EFGGCAGNIAYGLKLLGGEPLIMATLGEIDAQRYLERLDSLDIRRDCVRVLPDTHTAQ
AMITTDQENNQITAFHPGAMLMSHLNRVSDAQDVTLGIVAPDGAQGMCEHAEQFAQAN
IPFMFDPGQGLPILDGAQLRRMIELATYVAVNDYEAKLLSDKTGWSVTDIASRVDALI
ITLGAQGATIHHRNGVETIPVVPAERIVEPTGCGDAFRSGLLYGIEKGLDWATTGRLA
SLMGSIKIAHQGPQTYTLNRTEIGARFEVAFGYRLP"
misc_feature complement(341413..342273)
/locus_tag="RBRH_03213"
/note="Ribokinase-like subgroup A. Found in bacteria and
archaea, this subgroup is part of the ribokinase/pfkB
superfamily. Its oligomerization state is unknown at this
time; Region: ribokinase_group_A; cd01942"
/db_xref="CDD:29364"
misc_feature complement(341362..342177)
/locus_tag="RBRH_03213"
/note="Sugar kinases, ribokinase family [Carbohydrate
transport and metabolism]; Region: RbsK; COG0524"
/db_xref="CDD:30870"
misc_feature complement(order(341524..341526,341533..341535,
342127..342129))
/locus_tag="RBRH_03213"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:29364"
misc_feature complement(order(341443..341445,341452..341454,
341518..341520,341527..341532,341539..341541,
341623..341625,341707..341709))
/locus_tag="RBRH_03213"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:29364"
gene complement(342442..342942)
/locus_tag="RBRH_03212"
/db_xref="GeneID:9987429"
CDS complement(342442..342942)
/locus_tag="RBRH_03212"
/EC_number="1.11.1.15"
/codon_start=1
/transl_table=11
/product="Thioredoxin peroxidase"
/protein_id="YP_004028027.1"
/db_xref="GI:312795105"
/db_xref="GeneID:9987429"
/translation="MSQVTLGGNPIEVAGTLPAVGQKAAPFSLVGKDLADVKLNDFAG
KRKVLNIVPSLDTPTCATSTRKFNEAASKLENTVVIVISADLPFAATRFCTTEGIENV
ITASTFRNREFAGQYGVEIKTGPLAGLTARAVVVLDGDDKVLHVERVSEIKNEPHYDA
ALAALK"
misc_feature complement(342451..342888)
/locus_tag="RBRH_03212"
/note="Peroxiredoxin (PRX) family, Atypical 2-cys PRX
subfamily; composed of PRXs containing peroxidatic and
resolving cysteines, similar to the homodimeric thiol
specific antioxidant (TSA) protein also known as
TRX-dependent thiol peroxidase (Tpx). Tpx is a...; Region:
PRX_Atyp2cys; cd03014"
/db_xref="CDD:48563"
misc_feature complement(order(342559..342564,342619..342621,
342667..342669,342685..342690,342775..342777,
342781..342783))
/locus_tag="RBRH_03212"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:48563"
misc_feature complement(order(342547..342549,342763..342765,
342772..342774))
/locus_tag="RBRH_03212"
/note="catalytic triad [active]"
/db_xref="CDD:48563"
misc_feature complement(order(342661..342663,342763..342765))
/locus_tag="RBRH_03212"
/note="peroxidatic and resolving cysteines [active]"
/db_xref="CDD:48563"
gene 343008..343154
/locus_tag="RBRH_03211"
/db_xref="GeneID:9987428"
CDS 343008..343154
/locus_tag="RBRH_03211"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028028.1"
/db_xref="GI:312795106"
/db_xref="GeneID:9987428"
/translation="MARMPRATTGRVASCRDGVVQFQLTGDEPVDGTAAGTAGSERHV
NGFP"
gene complement(343203..344102)
/locus_tag="RBRH_03210"
/db_xref="GeneID:9987427"
CDS complement(343203..344102)
/locus_tag="RBRH_03210"
/EC_number="2.1.1.-"
/codon_start=1
/transl_table=11
/product="50S ribosomal protein L11 methyltransferase"
/protein_id="YP_004028029.1"
/db_xref="GI:312795107"
/db_xref="GeneID:9987427"
/translation="MSYREVVVEVSRERAESLSDALLELGVLSVCVEDADADTPHEQA
LFGEPGLVPERAAWTHSRVIAMLAAQQDPAVLLAAAANEAGLPALPAFTARDVQEQDW
VRLTQSQFEPIHVGQRIWVVPSWHEAPQHDAVVLELDPGLAFGTGSHPTTRLCMEWIE
QHVRAGDSLLDYGCGSGILAILARKCGATPVVGIDIDPQAIDSAQHNSERNRVDVTYG
LPHECPANEFDVVIANILSNPLKLMASMLASRVKPGGRLALSGVLARQADEVAAAYAR
HIELAVWREQDGWACLAGQRRDN"
misc_feature complement(343212..344045)
/locus_tag="RBRH_03210"
/note="Ribosomal protein L11 methyltransferase (PrmA);
Region: PrmA; pfam06325"
/db_xref="CDD:148126"
misc_feature complement(343311..343598)
/locus_tag="RBRH_03210"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cd02440"
/db_xref="CDD:100107"
misc_feature complement(order(343401..343403,343449..343451,
343515..343520,343569..343589))
/locus_tag="RBRH_03210"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
gene complement(344108..345481)
/locus_tag="RBRH_03209"
/db_xref="GeneID:9987426"
CDS complement(344108..345481)
/locus_tag="RBRH_03209"
/EC_number="6.3.4.14"
/codon_start=1
/transl_table=11
/product="biotin carboxylase"
/protein_id="YP_004028030.1"
/db_xref="GI:312795108"
/db_xref="GeneID:9987426"
/translation="MPMFEKILIANRGEIALRIQRACRELGVKTVVIYSEADKEAKYV
RLADEAVCIGPAPSNLSYLNMPALISAAEVTDAEAIHPGYGFLSENADFAERVEQSGF
TFIGPRPETIRLMGDKVSAKQTMIKTGVPCVPGSDGALPDDPKEIVKIARSVGYPVII
KAAGGGGGRGMRVVHTEAALVNAVNMTREEAGRAFGNPQVYMEKFLENPRHIEIQVLA
DSFKSAVWLGERDCSMQRRHQKVIEEAPAPHIARRLIDRIGDRCAEACKKMGYLGAGT
FEFLYENGEFYFIEMNTRVQVEHPVTELITGVDIVQEQIRIAAGEKLSVRQRDIAFRG
HAIECRINAEDPFKFTPSPGRITSWHAPGGPGIRVDSHAYNGYFVPPNYDSMIGKLIA
YGATREQAINRMRIALSEMVVEGIQTNIPLHRELMLDAKFVQGGTSIHYLEDKLAAKQ
QVAPKEA"
misc_feature complement(344129..345475)
/locus_tag="RBRH_03209"
/note="acetyl-CoA carboxylase biotin carboxylase subunit;
Validated; Region: PRK08591"
/db_xref="CDD:181492"
misc_feature complement(345149..345472)
/locus_tag="RBRH_03209"
/note="Carbamoyl-phosphate synthase L chain, N-terminal
domain; Region: CPSase_L_chain; pfam00289"
/db_xref="CDD:201133"
misc_feature complement(344597..345133)
/locus_tag="RBRH_03209"
/note="ATP-grasp domain; Region: ATP-grasp_4; cl03087"
/db_xref="CDD:207834"
misc_feature complement(344153..344470)
/locus_tag="RBRH_03209"
/note="Biotin carboxylase C-terminal domain; Region:
Biotin_carb_C; smart00878"
/db_xref="CDD:197946"
gene complement(345491..345961)
/locus_tag="RBRH_03208"
/db_xref="GeneID:9987425"
CDS complement(345491..345961)
/locus_tag="RBRH_03208"
/EC_number="6.4.1.2"
/codon_start=1
/transl_table=11
/product="biotin carboxyl carrier protein of acetyl-CoA
carboxylase"
/protein_id="YP_004028031.1"
/db_xref="GI:312795109"
/db_xref="GeneID:9987425"
/translation="MDLRKLKTLIDLVSESGISELEVTEGEGKVRIVKNAAPVYLPSQ
AQYAPAPQVTGVPGAPAAASTESNAPATPAAATPQGHVVTSPMVGTFYRAPSPGADPF
VQVGDSVKEGQTICIIEAMKLLNEIEADKTGVVKEILVENGQAVEYGQSLFVIG"
misc_feature complement(345494..345961)
/locus_tag="RBRH_03208"
/note="acetyl-CoA carboxylase biotin carboxyl carrier
protein subunit; Validated; Region: PRK06302"
/db_xref="CDD:180522"
misc_feature complement(345497..345718)
/locus_tag="RBRH_03208"
/note="The biotinyl-domain or biotin carboxyl carrier
protein (BCCP) domain is present in all biotin-dependent
enzymes, such as acetyl-CoA carboxylase, pyruvate
carboxylase, propionyl-CoA carboxylase, methylcrotonyl-CoA
carboxylase, geranyl-CoA carboxylase; Region:
biotinyl_domain; cd06850"
/db_xref="CDD:133459"
misc_feature complement(order(345572..345574,345593..345601,
345626..345628))
/locus_tag="RBRH_03208"
/note="carboxyltransferase (CT) interaction site; other
site"
/db_xref="CDD:133459"
misc_feature complement(345596..345598)
/locus_tag="RBRH_03208"
/note="biotinylation site [posttranslational
modification]; other site"
/db_xref="CDD:133459"
gene complement(346037..346558)
/locus_tag="RBRH_03207"
/db_xref="GeneID:9987424"
CDS complement(346037..346558)
/locus_tag="RBRH_03207"
/EC_number="4.2.1.10"
/codon_start=1
/transl_table=11
/product="3-dehydroquinate dehydratase"
/protein_id="YP_004028032.1"
/db_xref="GI:312795110"
/db_xref="GeneID:9987424"
/translation="MRRKLDNFFESAVKCAQIRRKRAPMSLRILVVNGPNLNLLGTRE
PQTYGSTTLAQIEQALAQKANAAGAALICFQSNHEGDIIERLHQARDEQIGFVLINPA
ALTHTSVAIRDAIAATGIPFVEIHLSNVHRREAFRHVSYLSDLAEGVICGLGWRGYLY
ALDFALERLGRPH"
misc_feature complement(346055..346435)
/locus_tag="RBRH_03207"
/note="Dehydroquinase (DHQase), type II. Dehydroquinase
(or 3-dehydroquinate dehydratase) catalyzes the reversible
dehydration of 3-dehydroquinate to form
3-dehydroshikimate. This reaction is part of two metabolic
pathways: the biosynthetic shikimate pathway...; Region:
DHQase_II; cd00466"
/db_xref="CDD:63885"
misc_feature complement(order(346148..346150,346175..346183,
346220..346222,346241..346243,346250..346255,
346259..346261,346415..346417,346430..346432))
/locus_tag="RBRH_03207"
/note="active site"
/db_xref="CDD:63885"
misc_feature complement(order(346148..346150,346208..346210,
346217..346222,346229..346231,346250..346252,
346298..346300,346307..346309,346316..346330))
/locus_tag="RBRH_03207"
/note="trimer interface [polypeptide binding]; other site"
/db_xref="CDD:63885"
misc_feature complement(order(346058..346060,346067..346069,
346079..346081,346091..346093,346100..346108,
346112..346123,346127..346132,346163..346168,
346172..346174))
/locus_tag="RBRH_03207"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:63885"
gene complement(346519..346755)
/locus_tag="RBRH_03206"
/db_xref="GeneID:9987423"
CDS complement(346519..346755)
/locus_tag="RBRH_03206"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028033.1"
/db_xref="GI:312795111"
/db_xref="GeneID:9987423"
/translation="MLCGTPTRHSRVSHRQRVLITNVDYKLHGNLLINCRRLPLLAAI
CRLIGLIYSRHVLPNVRSFSGECAENWTIFLNQR"
gene complement(346773..347396)
/locus_tag="RBRH_03205"
/db_xref="GeneID:9987422"
CDS complement(346773..347396)
/locus_tag="RBRH_03205"
/codon_start=1
/transl_table=11
/product="thiol:disulfide interchange protein tlpA"
/protein_id="YP_004028034.1"
/db_xref="GI:312795112"
/db_xref="GeneID:9987422"
/translation="MLNGNAMNSTLYPSFPPACPAPAPARRARAAWRAVACLLCAPLP
ACAAQPAGTAQSAYATVPPYAAHDDAVRALFASSLPDPVGQLQPLAQYRGKVTVVNFW
ASWCAPCVKEMPALSGLQRRYADKGVRFVGIGVDSARNISQFLSKVTIGYPVYVAGFG
GADLARQFGNQAGGLPFTVVIDKAGHVRYSKLGEIDVARLSMELDAL"
misc_feature complement(346818..347165)
/locus_tag="RBRH_03205"
/note="TlpA-like family; composed of TlpA, ResA, DsbE and
similar proteins. TlpA, ResA and DsbE are bacterial
protein disulfide reductases with important roles in
cytochrome maturation. They are membrane-anchored proteins
with a soluble TRX domain containing a...; Region:
TlpA_like_family; cd02966"
/db_xref="CDD:48515"
misc_feature complement(order(347070..347072,347079..347081))
/locus_tag="RBRH_03205"
/note="catalytic residues [active]"
/db_xref="CDD:48515"
gene complement(347502..348122)
/locus_tag="RBRH_03204"
/db_xref="GeneID:9987421"
CDS complement(347502..348122)
/locus_tag="RBRH_03204"
/codon_start=1
/transl_table=11
/product="nucleotidyltransferase domain-containing
protein"
/protein_id="YP_004028035.1"
/db_xref="GI:312795113"
/db_xref="GeneID:9987421"
/translation="MASKLHLERDRVRDEIAMVAARLIAEDGLDYASAKRKAARQIIG
ETRVAGEWLPDNDRIEEEIREYLALFHGDTQPGILRRLRKTALDWMARLAQFNPYLTG
AVLNGTAGVHSDIHLQVFCDNPKEVAIHLLNAGIQYDVSETRHFAGRGAVETLSFIAR
DSDGNAVGLHVALYDTNDLRGAVRADARGRQARANAASVRALLDAG"
gene 348294..349688
/locus_tag="RBRH_03203"
/db_xref="GeneID:9987420"
CDS 348294..349688
/locus_tag="RBRH_03203"
/EC_number="6.3.2.-"
/codon_start=1
/transl_table=11
/product="UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-
meso-diaminopimelate ligase"
/protein_id="YP_004028036.1"
/db_xref="GI:312795114"
/db_xref="GeneID:9987420"
/translation="MHIHILGICGTFMGGLAVLARAAGHKVTGCDTGVYPPMSTQLQS
QGIELIQGYGEEQLALQPDLFVVGNVVMRGNPLMEAILDRGLPYVSGPQWLGEHVLAG
KWVLAVAGTHGKTSTASMLAWLLEDAGMNPGFLIGGVPLNFGISARLTDSSFFVIEAD
EYDTAFFDKRSKFVHYRPRTAILNNLEFDHADIFDNLAAIETQFHHLVRTIPRTGRLV
VNGTDDALQRVLARGCWSEVERFGVEGGWQVLPADEASPADERFAVYWRAQRVGVVNW
SLQGEHNRMNALAAIAAAHNVGVPAVQAATSLGGFRNVKRRMEVRGSIDGVTIYDDFA
HHPSAIGTTIAGLRTRIGDAPHARILAVLEPRSNTMKLGTMKAQLPASLAGADLVFGY
GAPSGKDALGWDLGAALAPLGDKAHAFDDLGALVRAVAAAARAGDHVLVMSNGSFGGV
HQKLFDALANRGAT"
misc_feature 348297..349670
/locus_tag="RBRH_03203"
/note="UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-
meso-diaminopimelate ligase; Region: mpl; TIGR01081"
/db_xref="CDD:130153"
misc_feature 348297..348584
/locus_tag="RBRH_03203"
/note="Mur ligase family, catalytic domain; Region:
Mur_ligase; pfam01225"
/db_xref="CDD:201670"
misc_feature 348621..349142
/locus_tag="RBRH_03203"
/note="Mur ligase middle domain; Region: Mur_ligase_M;
pfam08245"
/db_xref="CDD:203888"
misc_feature 349233..>349382
/locus_tag="RBRH_03203"
/note="Mur ligase family, glutamate ligase domain; Region:
Mur_ligase_C; pfam02875"
/db_xref="CDD:202441"
gene 349685..350299
/locus_tag="RBRH_03202"
/db_xref="GeneID:9987419"
CDS 349685..350299
/locus_tag="RBRH_03202"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028037.1"
/db_xref="GI:312795115"
/db_xref="GeneID:9987419"
/translation="MILYLHGFRSSPRSFKARLLAERLTRLGRAGDWLCPQLPVSPRD
TIALAERLVQQTQQARAAERAAPVTLIGSSLGGFFATYLAEKHGWPAMLLNPAVMPQR
DLSAYLGEQPLWHGGGSVVVEPHHLDELRALQVAAITRPERYHLIAATGDEVLDYREM
LAHYAGVRTTLINGGDHAISDFATYVDEVLAFCGIDTDRGPVAA"
misc_feature 349685..350266
/locus_tag="RBRH_03202"
/note="Uncharacterized protein family (UPF0227); Region:
UPF0227; pfam05728"
/db_xref="CDD:114453"
misc_feature 349688..350221
/locus_tag="RBRH_03202"
/note="Alpha/beta hydrolase family; Region: Abhydrolase_6;
pfam12697"
/db_xref="CDD:205026"
gene 350375..352483
/locus_tag="RBRH_03201"
/db_xref="GeneID:9987418"
CDS 350375..352483
/locus_tag="RBRH_03201"
/EC_number="3.1.13.1"
/codon_start=1
/transl_table=11
/product="exoribonuclease II"
/protein_id="YP_004028038.1"
/db_xref="GI:312795116"
/db_xref="GeneID:9987418"
/translation="MNVFFEESGSFKAGTVLNRQGDAFQVELPGGRRAKVRSKDVLIE
FDSPSAADLIQQADAAAKEIDLDFLWEISPPDEFRFTDLANDYFGGTPDPVQKSALVL
CMHGSPVYFRRKGRGQYQRAPEEQLKMALAALERRRQQAIVQQQYEDELKAGRLPAAF
DGKVLGLLTRADKNSIEYKALEAAALALGKSAAQLMLDVGGIPSARALHEARFLSEYF
PHGTGFPTLNAGPLPEDLGEAIGVQAFSVDDVTTTEIDDAFSVQRLPHGRARIGIHIA
APALGIERGDAVDAIARARLSTVYMPGDKITMLPDDFVGTFTLKEGGLRPALSLYLII
DTATQDIVMTETVAERVHVVSNLRHNVLDEIITEQTLEAGAGDYPHKDEIAVLWPFAK
ALYERRQQARIGYGLRREVQRNIDYNFYVDGEHVSITPRRRGSPLDLIVAELAILANS
RWGAFLHEHGVPGIYRAQRAFGPNRTRMQTTPAPHEGLGVAQYAWSTSPLRRYVDLVN
QWQLLACVRHGVTAKLAAPFKPKDADLYAIVQNFDETYTAYADHQRRMEYFWCLRWLK
QEKRDRVVATIVKDDVVRLEEVPLLLHVPGLGVQARGTRVLLEVMAIDELRVEASCRL
IEVLDVTRVTGGDETNEDADRALDTNSGTDMEAATGHDVQVLGDASDASAKSGDAQPD
AGAAVHGDVTHQRNDGEVAQ"
misc_feature 351074..351928
/locus_tag="RBRH_03201"
/note="This domain is the catalytic domain of ribonuclease
II; Region: RNB; smart00955"
/db_xref="CDD:198023"
misc_feature 351104..351916
/locus_tag="RBRH_03201"
/note="RNB domain; Region: RNB; pfam00773"
/db_xref="CDD:201436"
gene 352480..353352
/locus_tag="RBRH_03200"
/db_xref="GeneID:9987417"
CDS 352480..353352
/locus_tag="RBRH_03200"
/EC_number="1.1.1.25"
/codon_start=1
/transl_table=11
/product="shikimate 5-dehydrogenase"
/protein_id="YP_004028039.1"
/db_xref="GI:312795117"
/db_xref="GeneID:9987417"
/translation="MSAPPAPGGQGPDRYAVIGNPVAHSKSPAIHASFAQQTGEPVEY
DRILAPVDGFAQAVDAFVSAGGCGLNVTVPFKLQAYALATRRSARAQAAGAVNTLRFD
RVDGGRIEIVGDNTDGVGLVTDVEAQPRVALNGARVLLLGAGGAARGVILPLLERRPR
ALTIVNRTAARAAELTERFAASARAAGCALEGGAPGVEHGVYDIVINATAGSLDGAVP
VFAAACVGPGTLAYDMMYAAGPTVFMQHAARLSARTVDGLGMLVRQAAESFFVWRGVR
PDPAPVLAALRASL"
misc_feature 352516..353349
/locus_tag="RBRH_03200"
/note="shikimate 5-dehydrogenase; Reviewed; Region: aroE;
PRK00258"
/db_xref="CDD:178949"
misc_feature 352528..352776
/locus_tag="RBRH_03200"
/note="Shikimate dehydrogenase substrate binding domain;
Region: Shikimate_dh_N; pfam08501"
/db_xref="CDD:149523"
misc_feature <353071..353301
/locus_tag="RBRH_03200"
/note="NAD(P) binding domain of Shikimate dehydrogenase;
Region: NAD_bind_Shikimate_DH; cd01065"
/db_xref="CDD:133443"
misc_feature order(353101..353106,353179..353181,353248..353250,
353257..353262)
/locus_tag="RBRH_03200"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:133443"
misc_feature order(353185..353187,353260..353262,353269..353271)
/locus_tag="RBRH_03200"
/note="shikimate binding site; other site"
/db_xref="CDD:133443"
gene 353429..354262
/locus_tag="RBRH_03199"
/db_xref="GeneID:9987416"
CDS 353429..354262
/locus_tag="RBRH_03199"
/EC_number="4.1.1.23"
/codon_start=1
/transl_table=11
/product="Orotidine 5'-phosphate decarboxylase"
/protein_id="YP_004028040.1"
/db_xref="GI:312795118"
/db_xref="GeneID:9987416"
/translation="MLLADPTMSFIATLERAWQRTQSLLCVGLDPEPSRFPPHLAGRA
DAIFTFCRDIVDATAPYASAFKPQIAYFAAHRAEAQLEALIAHIHARHPGLPVVLDAK
RGDIGSTAEQYAREAFERYRADAVTVNPYLGFDSIEPYLAYRDKGVIVLCRTSNQGGS
DLQFLDIGGRPLYQHVAALAAEQWNTSGQLGLVVGATFPKEIDAVRQLVGTMPLLIPG
IGAQGGDIEATVHAGRTADGTGMMINSSRAILYARSGEDFAAAAAEAARATRDAINAY
R"
misc_feature 353501..354184
/locus_tag="RBRH_03199"
/note="Orotidine 5'-phosphate decarboxylase (ODCase) is a
dimeric enzyme that decarboxylates orotidine
5'-monophosphate (OMP) to form uridine 5'-phosphate (UMP),
an essential step in the pyrimidine biosynthetic pathway.
In mammals, UMP synthase contains two...; Region:
OMP_decarboxylase_like; cd04725"
/db_xref="CDD:73387"
misc_feature order(353510..353512,353516..353518,353624..353626,
353630..353632,353726..353728,353732..353734,
353888..353893,354077..354079,354164..354169)
/locus_tag="RBRH_03199"
/note="active site"
/db_xref="CDD:73387"
misc_feature order(353630..353632,353636..353641,353729..353734,
353738..353743,353750..353755,353762..353767,
353813..353821,353852..353854,353888..353890,
353942..353944,354167..354169)
/locus_tag="RBRH_03199"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:73387"
gene complement(354299..354838)
/locus_tag="RBRH_03198"
/db_xref="GeneID:9987415"
CDS complement(354299..354838)
/locus_tag="RBRH_03198"
/codon_start=1
/transl_table=11
/product="competence-damage protein"
/protein_id="YP_004028041.1"
/db_xref="GI:312795119"
/db_xref="GeneID:9987415"
/translation="MVSFLLANNKFNSMATDTVVHQLAIRVGNRLRDERLMLVTAESC
TGGMVATAITDIPGSSGWFERGFVTYSNLAKTEMIGVPADMIERHGAVSEPVARAMAE
GALRNSRAQLALSITGLAGPDGGSEAKPVGTVVFAWTNRLHTISEVQLLRGDRGQIRK
QSAAHALRGLLKLLDEKEH"
misc_feature complement(354317..354772)
/locus_tag="RBRH_03198"
/note="Competence-damaged protein; Region: CinA;
pfam02464"
/db_xref="CDD:145546"
gene complement(354872..355495)
/locus_tag="RBRH_03197"
/db_xref="GeneID:9987414"
CDS complement(354872..355495)
/locus_tag="RBRH_03197"
/EC_number="3.1.3.27"
/codon_start=1
/transl_table=11
/product="phosphatidylglycerophosphatase A"
/protein_id="YP_004028042.1"
/db_xref="GI:312795120"
/db_xref="GeneID:9987414"
/translation="MRPAPRSAQLGAVLTISMQNDPSHSNAHRPHVATVTPGGTPPGR
RAAPRSRATARFMLSHPLHVLSFGFGSGLSPVMPGTVGTLFGWLSFIALNPYLSVVQW
WMLIAVGFVAGCGFTGFTARRMGVADPGAVVWDEIIAIWLVLLFVTPANFAGQLGAFL
TFRFFDMVKPPPIRYFDRRLSGGFGIMFDDIVAAFFTLLVIALVRSF"
misc_feature complement(354881..355309)
/locus_tag="RBRH_03197"
/note="Phosphatidylglycerophosphatase A; a bacterial
membrane-associated enzyme involved in lipid metabolism;
Region: PgpA; cd06971"
/db_xref="CDD:133477"
misc_feature complement(order(354881..354886,354995..355000,
355004..355009,355013..355021,355025..355033,
355064..355066,355073..355078,355082..355087,
355094..355102,355109..355111,355157..355162,
355169..355174,355181..355183,355235..355237,
355301..355303))
/locus_tag="RBRH_03197"
/note="tetramer interfaces [polypeptide binding]; other
site"
/db_xref="CDD:133477"
misc_feature complement(order(354926..354931,354938..354940,
355088..355093,355100..355102))
/locus_tag="RBRH_03197"
/note="binuclear metal-binding site [ion binding]; other
site"
/db_xref="CDD:133477"
gene complement(355434..356531)
/locus_tag="RBRH_03196"
/db_xref="GeneID:9987413"
CDS complement(355434..356531)
/locus_tag="RBRH_03196"
/EC_number="2.7.4.16"
/codon_start=1
/transl_table=11
/product="Thiamine-monophosphate kinase"
/protein_id="YP_004028043.1"
/db_xref="GI:312795121"
/db_xref="GeneID:9987413"
/translation="MATPCSGVAHGAARTPVMQASSRIMPTSLSEFNLIDRYFARHRP
SRRDAVLGIGDDCALLAGRPGHELAVSTDMLIEGRHFFADVPPATLGHKALAVNLSDL
AAMGAEPRAFTLALALPDAGVARQDWLEAFAQGLFALADRHGCELVGGDTTAGALNIC
ITVFGDVPRGQALRRDAAQPGDDIWVSGVLGDARLALGALRGEWPLAANELPALRHAL
QMPEPRIALGIALRGVAHAALDLSDGLAGDLAHLLKRSHVAARVDVDALPRSAALRAQ
PLSIQHRCAIEGGDDYELCFTAPPSQRATLLALAARIGVPLTRIGTIDALADPPAGDT
TAVNAHAVHWYDASGAPIGTTWRSFDHFHAE"
misc_feature complement(355446..356447)
/locus_tag="RBRH_03196"
/note="thiamine monophosphate kinase; Provisional; Region:
PRK05731"
/db_xref="CDD:180226"
misc_feature complement(355563..356444)
/locus_tag="RBRH_03196"
/note="ThiL (Thiamine-monophosphate kinase) plays a dual
role in de novo biosynthesis and in salvage of exogenous
thiamine. Thiamine salvage occurs in two steps, with
thiamine kinase catalyzing the formation of thiamine
phosphate, and ThiL catalyzing the...; Region: ThiL;
cd02194"
/db_xref="CDD:100030"
misc_feature complement(order(355803..355808,355812..355814,
356007..356009,356079..356087,356133..356135,
356190..356192,356229..356231,356364..356372,
356427..356429))
/locus_tag="RBRH_03196"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:100030"
misc_feature complement(order(356046..356048,356052..356054,
356070..356081,356088..356090,356133..356135,
356304..356306,356310..356318,356361..356363,
356418..356420))
/locus_tag="RBRH_03196"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:100030"
gene 356434..356574
/locus_tag="RBRH_03195"
/db_xref="GeneID:9987412"
CDS 356434..356574
/locus_tag="RBRH_03195"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028044.1"
/db_xref="GI:312795122"
/db_xref="GeneID:9987412"
/translation="MNSDKDVGMMRDEACMTGVRAAPCATPLHGVAIAATVGQRRSKI
RQ"
gene 356502..358937
/locus_tag="RBRH_03194"
/db_xref="GeneID:9987411"
CDS 356502..358937
/locus_tag="RBRH_03194"
/EC_number="1.1.1.40"
/codon_start=1
/transl_table=11
/product="NADP-dependent malic enzyme"
/protein_id="YP_004028045.1"
/db_xref="GI:312795123"
/db_xref="GeneID:9987411"
/translation="MRDAAARCRHRGDSRTAPIQDPPMTLQCSSTTHSNPHCQAIMST
PTHSKLREAALDYHEFPTPGKIAIAPTKQMINQRDLALAYSPGVAAACEEIVANPLNA
ARFTARSNLVGVVSNGTAVLGLGDIGPLAAKPVMEGKAVLFKKFAGIDVFDIELNEKD
PQKLIEVIAALEPTFGGINLEDIKAPDCFTVERECRKRMKIPVFHDDQHGTAIVVAAA
VTNGLKVVGKSLSEVKVVACGAGAAALACLNLLLGMGLKRQNVFVTDLIGVVYEGRTE
LMDPDKALFAQVTDARTLSDVIGGADVFLGLSAGGVLKPDMVKQMAARPLILALANPT
PEILPEVALQVRPDAILATGRTDYPNQVNNVLCFPFIFRGALDAGATTITKEMEIAAV
NAIAELARQEQSDIVATAYGIQDLTFGPEYLIPKPFDPRLIVKIAPAVAQAAMDCGVA
TRPIEDMDAYRQHLQQFVYHSGTTMKPIFQIARSIDADKKRIVFAEGEEERILRAVQI
VVDERLAKPILIGRPAVIEQRIARYGLRLVPGQDFTIVNTDHDERYRDFWQTYFKMMA
RKGITQQLAKVEMRRRTTLIGSMLVLKGEADGMICGTISTTHRHLHFIDQVIGKRAGC
SVYAAMNCLVLPDRQIFLADTHVNVDPTPEELAEITVMAADEVRRFGIEPKIALLSHS
NFGSSNAPSAKKMRDTLALLQQRAPQLQIDGEMHGDVALDANLRKFVLPEATLEGDAN
LLILPNIDAANISYNLLKTAAGNNIAIGPILLGAAKPVHVLTASATVRRIVNMTALLV
ADVAAGTKESGGR"
misc_feature 356625..358910
/locus_tag="RBRH_03194"
/note="malic enzyme; Reviewed; Region: PRK12862"
/db_xref="CDD:183799"
misc_feature 356688..357080
/locus_tag="RBRH_03194"
/note="Malic enzyme, N-terminal domain; Region: malic;
pfam00390"
/db_xref="CDD:201200"
misc_feature 357123..357833
/locus_tag="RBRH_03194"
/note="NAD(P) binding domain of malic enzyme (ME),
subgroup 2; Region: NAD_bind_2_malic_enz; cd05311"
/db_xref="CDD:133453"
misc_feature order(357219..357230,357294..357299,357420..357425,
357435..357437,357489..357497,357561..357563,
357585..357587,357591..357593)
/locus_tag="RBRH_03194"
/note="putative NAD(P) binding site [chemical binding];
other site"
/db_xref="CDD:133453"
misc_feature 357921..358889
/locus_tag="RBRH_03194"
/note="Phosphate acetyl/butaryl transferase; Region:
PTA_PTB; pfam01515"
/db_xref="CDD:201836"
gene 358934..359041
/locus_tag="RBRH_03193"
/db_xref="GeneID:9987410"
CDS 358934..359041
/locus_tag="RBRH_03193"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028046.1"
/db_xref="GI:312795124"
/db_xref="GeneID:9987410"
/translation="MSRAEAGNGSATVAWRVLYEAHASKPDAQKSVPHE"
gene 359013..359183
/locus_tag="RBRH_03192"
/db_xref="GeneID:9987409"
CDS 359013..359183
/locus_tag="RBRH_03192"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028047.1"
/db_xref="GI:312795125"
/db_xref="GeneID:9987409"
/translation="MHKKACLTNEARKRIFDDCSEHPNLDCFVDTLVMIDSEPVCQSW
KLTLQLSNTIDY"
gene 359211..359606
/locus_tag="RBRH_03191"
/db_xref="GeneID:9987408"
CDS 359211..359606
/locus_tag="RBRH_03191"
/EC_number="3.1.27.3"
/codon_start=1
/transl_table=11
/product="Guanyl-specific ribonuclease"
/protein_id="YP_004028048.1"
/db_xref="GI:312795126"
/db_xref="GeneID:9987408"
/translation="MVVYASSSRNEIQDRQVAPLRRACGDRVRHQRAWLGFHRVGANL
LPSDASIGASLGEVSIAGLPGEVQFTFQSIQAGGPFPYPKDGEVFGHVERHLPVRPRD
YSHEYTVKTPRASSRRTKNRLRKSAALYR"
misc_feature 359373..>359570
/locus_tag="RBRH_03191"
/note="microbial_RNases. Ribonucleases (RNAses) cleave
phosphodiester bonds in RNA and are essential for both
non-specific RNA degradation and for numerous forms of RNA
processing. The alignment contains fungal RNases (U2, T1,
F1, Th, Pb, N1, and Ms) and...; Region: microbial_RNases;
cl00212"
/db_xref="CDD:206904"
misc_feature order(359475..359477,359526..359528)
/locus_tag="RBRH_03191"
/note="active site"
/db_xref="CDD:29490"
gene 359655..360215
/locus_tag="RBRH_03190"
/db_xref="GeneID:9987407"
CDS 359655..360215
/locus_tag="RBRH_03190"
/codon_start=1
/transl_table=11
/product="ribonuclease inhibitor barstar"
/protein_id="YP_004028049.1"
/db_xref="GI:312795127"
/db_xref="GeneID:9987407"
/translation="MTTVMSDNTYSHGTGVARDIFALNDSRLFQRVLRQQDAEREQRR
AGALLFNEGNMSLFKTVRSNIVQSIRAFRVPELADEAARLGHHFLYANCAAAQTKAEV
LETISTSFFFPKHFGKNYDALYDCLTDVVHKAGAQPGFVIVLEGLPATQKFDKEARET
LLDVFREAAEFWAERKVNFRVFYSFA"
misc_feature 359919..360167
/locus_tag="RBRH_03190"
/note="Barstar_evA4336-like contains uncharacterized
sequences similar to the uncharacterized, predicted RNAase
inhibitor evA4336 found in Azoarcus sp. EvN1. This is a
subfamily of the Barstar family of RNAase inhibitors.
Barstar is an intracellular inhibitor...; Region:
Barstar_evA4336-like; cd05141"
/db_xref="CDD:88270"
misc_feature order(359997..359999,360003..360005,360009..360017,
360027..360029,360153..360155)
/locus_tag="RBRH_03190"
/note="putative RNAase interaction site [polypeptide
binding]; other site"
/db_xref="CDD:88270"
gene complement(360264..361079)
/locus_tag="RBRH_03189"
/db_xref="GeneID:9987406"
CDS complement(360264..361079)
/locus_tag="RBRH_03189"
/codon_start=1
/transl_table=11
/product="surface protein"
/protein_id="YP_004028050.1"
/db_xref="GI:312795128"
/db_xref="GeneID:9987406"
/translation="MTQSSRCAHARHPLHPALSTMTTLSPPRFFVPMPLHSGHSMPLP
DDVVRHMHVLRLQAGDKAILFNGEGGQFDAELLQLDKRSATVQVGRFDAREVEPPYRV
VLAQGIAGGDKMDWLLEKAIELGVASVIPLVTARSVVRLTGERAARRHAHWQALVRAA
CEQCGRNQLPDVAPPTDVMAWLESSVALPRDNALRLLLSPRAERPFAALPDTAPAAPV
IVMIGPEGGLSATEEAAAISHGFMPLGLGPRVLRTETAGIAVLAALAARWGGW"
misc_feature complement(360267..361001)
/locus_tag="RBRH_03189"
/note="16S ribosomal RNA methyltransferase RsmE;
Provisional; Region: PRK11713"
/db_xref="CDD:183286"
misc_feature complement(360315..360953)
/locus_tag="RBRH_03189"
/note="RNA methyltransferase; Region: Methyltrans_RNA;
pfam04452"
/db_xref="CDD:203020"
gene complement(361131..362246)
/locus_tag="RBRH_03188"
/db_xref="GeneID:9987405"
CDS complement(361131..362246)
/locus_tag="RBRH_03188"
/EC_number="2.5.1.16"
/codon_start=1
/transl_table=11
/product="spermidine synthase"
/protein_id="YP_004028051.1"
/db_xref="GI:312795129"
/db_xref="GeneID:9987405"
/translation="MGIACGHTRARSVAKHIILTDRSAAAWACCAAPQTRAGIANCLA
TAPQRRHATLEEPCQLKPQSPSFHTPPAVGPADATHDTERPDAHGSTLTLRPCAYYAY
TFTGARRLQTIKSAYQHIEVWDTPLLGKLFVLDQRPMTSERDEYLYHESMVHPGALAR
KQPPRRVLVLGGGDGGAARQWLKYEALEHIVIAELDPAVVAMARRHLQRVHRGALDDP
RVQIVTGDALHFVQHTQERFDAVVFDLTPPDSPASTLYTRSFYALLRTRMVDDAVLSI
HLGSPLFQPGQVAALLGTLRAAFGHVALMQTYVPLYGSPWQMAVVSDTFDVGQLPAQQ
AVERAAQWGLSRLEYYDPSRHDTFFIERIPDRGTAPQ"
misc_feature complement(361182..361949)
/locus_tag="RBRH_03188"
/note="spermidine synthase; Provisional; Region: PRK00811"
/db_xref="CDD:179134"
misc_feature complement(361449..361685)
/locus_tag="RBRH_03188"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cd02440"
/db_xref="CDD:100107"
gene complement(362189..362350)
/locus_tag="RBRH_04050"
/db_xref="GeneID:9987404"
CDS complement(362189..362350)
/locus_tag="RBRH_04050"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028052.1"
/db_xref="GI:312795130"
/db_xref="GeneID:9987404"
/translation="MAIMVVWVSGGVVMSGPDSGKAGPRASRVAAAPAQWESHAGTPA
REASQNTLF"
gene 362310..364343
/locus_tag="RBRH_03187"
/db_xref="GeneID:9988024"
CDS 362310..364343
/locus_tag="RBRH_03187"
/EC_number="2.2.1.1"
/codon_start=1
/transl_table=11
/product="transketolase"
/protein_id="YP_004028053.1"
/db_xref="GI:312795131"
/db_xref="GeneID:9988024"
/translation="MTTPPDTQTTMMANAIRALAMDAVQQANSGHPGMPMGMAEIAVA
LWQRHLRHNPANPHWADRDRFVLSNGHGSMLLYALLHLSGYDLPMDELKRFRQLHSRT
PGHPEVGITPGVETTTGPLGQGLANAVGMALAEALLAAEFNQPDAKIVDHYTYVFVGD
GCLMEGVSHEACSLAGTLGLSKLIVLYDDNGISIDGDVEHWFADDTPKRFEAYGWNVI
RAVDGHDVDAVDAAIRVAKQSDKPTLICCRTVIGRGAPNKAGGHDVHGAPLGATEIAA
TRAAIGWGAEPFVIPQDVYALWDAKQTGAQAEREWHEAFAAYRAKYPQQAAEFERRIA
GRLPAHWADAAQRLIAAANERAETVATRKASQQAIEALAAALPELLGGSADLTGSNLT
NWKASKPVRAGRESGAPILQWGNHVNYGVREFGMSAALNGVALHGGYLPFGGTFLTFS
DYSRNALRMAALMKTRSIFVFTHDSIGLGEDGPTHQSIEHVSSLRLIPNMDVWRPADT
VETAVAWTQAVERHGPSSLIFSRQNLAFCARTDAQIAAIARGGYVLRDWNDDIPARKV
ILIATGSEVELALNAVEPLARVGIGARVVSMPSTTVFDRQDAEWRERVLPRGVARVAI
EAGVTAFWHKYVGIDGGVVGIDTFGESAPAGVLFKHFGFMIDHVVDTVKSVLG"
misc_feature 362346..364337
/locus_tag="RBRH_03187"
/note="transketolase; Reviewed; Region: PRK12753"
/db_xref="CDD:183723"
misc_feature 362349..363143
/locus_tag="RBRH_03187"
/note="Thiamine pyrophosphate (TPP) family, Transketolase
(TK) subfamily, TPP-binding module; TK catalyzes the
transfer of a two-carbon unit from ketose phosphates to
aldose phosphates. In heterotrophic organisms, TK provides
a link between glycolysis and the...; Region: TPP_TK;
cd02012"
/db_xref="CDD:48175"
misc_feature order(362520..362522,362664..362666,362670..362672,
362787..362792,362802..362804,362877..362879,
362883..362885,362889..362891,363102..363104)
/locus_tag="RBRH_03187"
/note="TPP-binding site [chemical binding]; other site"
/db_xref="CDD:48175"
misc_feature order(362595..362597,362619..362624,362628..362630,
362667..362672,362676..362678,362796..362807,
362814..362819,362826..362828,362838..362840,
362886..362891,362934..362936)
/locus_tag="RBRH_03187"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:48175"
misc_feature 363462..363902
/locus_tag="RBRH_03187"
/note="Pyrimidine (PYR) binding domain of
1-deoxy-D-xylulose-5-phosphate synthase (DXS),
transketolase (TK), and related proteins; Region:
TPP_PYR_DXS_TK_like; cd07033"
/db_xref="CDD:132916"
misc_feature order(363462..363464,363552..363554,363561..363563,
363567..363584,363591..363596,363600..363608,
363663..363665,363672..363677,363750..363752,
363759..363761,363807..363812,363873..363875)
/locus_tag="RBRH_03187"
/note="PYR/PP interface [polypeptide binding]; other site"
/db_xref="CDD:132916"
misc_feature order(363462..363464,363561..363563,363570..363578,
363660..363665,363669..363671,363750..363752,
363756..363758,363783..363788,363792..363797,
363801..363803)
/locus_tag="RBRH_03187"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:132916"
misc_feature order(363570..363572,363576..363578,363654..363656,
363663..363665)
/locus_tag="RBRH_03187"
/note="TPP binding site [chemical binding]; other site"
/db_xref="CDD:132916"
misc_feature 363960..364313
/locus_tag="RBRH_03187"
/note="Transketolase, C-terminal domain; Region:
Transketolase_C; pfam02780"
/db_xref="CDD:202391"
gene 364351..365010
/locus_tag="RBRH_03186"
/db_xref="GeneID:9987403"
CDS 364351..365010
/locus_tag="RBRH_03186"
/EC_number="1.2.1.12"
/codon_start=1
/transl_table=11
/product="glyceraldehyde 3-phosphate dehydrogenase"
/protein_id="YP_004028054.1"
/db_xref="GI:312795132"
/db_xref="GeneID:9987403"
/translation="MCDVLTARRTPSVGALPFTHQEIDMTIRVAINGYGRIGRNTLRA
HYEGGKKHDIEIVAINDLGNAQTNAHLTQYDTAHGKFPGTVSVDGDYMIVNGDKIRVL
ANRNPAELPWDDLGVDVVLECTGFFTSKEKASAHLKGGAKKVVISAPGGKDVDATIVY
GVNHQVLKASDTVISNASCTTNCLAPLVKPLHDKIGVENGLMTTIHAYTNDQVLTDVY
P"
misc_feature 364429..364887
/locus_tag="RBRH_03186"
/note="Glyceraldehyde 3-phosphate dehydrogenase, NAD
binding domain; Region: Gp_dh_N; smart00846"
/db_xref="CDD:197914"
misc_feature 364900..>365004
/locus_tag="RBRH_03186"
/note="Glyceraldehyde 3-phosphate dehydrogenase,
C-terminal domain; Region: Gp_dh_C; cl15856"
/db_xref="CDD:210256"
gene 365045..365434
/locus_tag="RBRH_03185"
/db_xref="GeneID:9987402"
CDS 365045..365434
/locus_tag="RBRH_03185"
/EC_number="1.2.1.12"
/codon_start=1
/transl_table=11
/product="glyceraldehyde 3-phosphate dehydrogenase"
/protein_id="YP_004028055.1"
/db_xref="GI:312795133"
/db_xref="GeneID:9987402"
/translation="MIPTKTGAAAAVGLVLPELNGKLDGYAVRVPTINVSIVDLSFIA
SRDTSVDEVNKILKEASEGALKGILAYSDAPLVSVDFNHNPASSTFDATLTKVSGRLV
KVSSWYDNEWGFSNRMLDTTVALANAK"
misc_feature <365045..365368
/locus_tag="RBRH_03185"
/note="Glyceraldehyde 3-phosphate dehydrogenase,
C-terminal domain; Region: Gp_dh_C; pfam02800"
/db_xref="CDD:202402"
gene complement(365945..366373)
/locus_tag="RBRH_03184"
/db_xref="GeneID:9987401"
CDS complement(365945..366373)
/locus_tag="RBRH_03184"
/codon_start=1
/transl_table=11
/product="ferric uptake regulation protein"
/protein_id="YP_004028056.1"
/db_xref="GI:312795134"
/db_xref="GeneID:9987401"
/translation="MTNPADLKNMGLKATLPRLKILEIFQHSSVRHLTAEDVYRNLLN
EELDIGLATVYRVLTQFEQAGLLTRSNFESGKAVFELNEGTHHDHLVCLDCGRVEEFY
DHEIEHRQQLIAQERGFKLQEHALAMYGSCTKENCPHRKP"
misc_feature complement(365957..366373)
/locus_tag="RBRH_03184"
/note="ferric uptake regulator; Provisional; Region: fur;
PRK09462"
/db_xref="CDD:181877"
misc_feature complement(365978..366325)
/locus_tag="RBRH_03184"
/note="Ferric uptake regulator(Fur) and related
metalloregulatory proteins; typically iron-dependent,
DNA-binding repressors and activators; Region: Fur_like;
cd07153"
/db_xref="CDD:133478"
misc_feature complement(order(366074..366076,366107..366109,
366113..366115,366134..366136,366278..366280))
/locus_tag="RBRH_03184"
/note="metal binding site 2 [ion binding]; metal-binding
site"
/db_xref="CDD:133478"
misc_feature complement(366182..366226)
/locus_tag="RBRH_03184"
/note="putative DNA binding helix; other site"
/db_xref="CDD:133478"
misc_feature complement(order(366002..366004,366053..366055,
366110..366112,366116..366118))
/locus_tag="RBRH_03184"
/note="metal binding site 1 [ion binding]; metal-binding
site"
/db_xref="CDD:133478"
misc_feature complement(order(365981..366007,366011..366019,
366044..366049,366095..366103))
/locus_tag="RBRH_03184"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:133478"
misc_feature complement(order(365978..365980,366089..366091,
366098..366100))
/locus_tag="RBRH_03184"
/note="structural Zn2+ binding site [ion binding]; other
site"
/db_xref="CDD:133478"
gene 366488..367342
/locus_tag="RBRH_03183"
/db_xref="GeneID:9987400"
CDS 366488..367342
/locus_tag="RBRH_03183"
/codon_start=1
/transl_table=11
/product="outer membrane lipoprotein OmlA"
/protein_id="YP_004028057.1"
/db_xref="GI:312795135"
/db_xref="GeneID:9987400"
/translation="MGEMSSMFFSGARMGATVFAVTARVVVLAAVASLGACKTYDSLT
QRIARSITPYRITVVQGNFVSAEAASKLRVGMSRDEVRSVLGTPLLTDLFHTDRWDYV
FYFKRGSTSVVQQRDLVVNFVGDRVASWTGADDLPSEYELIAEIDGDRKGLKKVAAEA
AASGVSDVSALPSSHAANEEAAAAANHATAQVTPPSKGATPSVRANTPVANAQPPNTG
MPAQPQLQYQRATQPPLPPGVAPQHIALPPTGVAPSPDPSTGLAPANAANLQNQPVLE
PSDAQGTQ"
misc_feature 366668..366883
/locus_tag="RBRH_03183"
/note="SmpA / OmlA family; Region: SmpA_OmlA; pfam04355"
/db_xref="CDD:202983"
gene 367339..368139
/locus_tag="RBRH_03182"
/db_xref="GeneID:9987399"
CDS 367339..368139
/locus_tag="RBRH_03182"
/EC_number="1.3.1.26"
/codon_start=1
/transl_table=11
/product="dihydrodipicolinate reductase"
/protein_id="YP_004028058.1"
/db_xref="GI:312795136"
/db_xref="GeneID:9987399"
/translation="MMKIAIAGASGRMGQMLVETVLNTPEVTLSGALDRAGAAALGQD
AGAFAGRQTGIAITDDVERVLAHADVLIDFTRPEGTLEHLKAARRHGTRMVIGTTGFA
ESQKAELAAAAQTLGIVFAPNMSVGVNVTLKLLQVAAAHFATGYDIEIIEAHHRHKVD
APSGTALQMGEVIATALGRDLASCAVYGRHGVTGERDPSTIGFSAIRGGDIVGDHTVM
FAGTGERIEITHKSANRLAYAQGAVRAARFLAGRPAGLYDMWDVLGLR"
misc_feature 367339..368133
/locus_tag="RBRH_03182"
/note="dihydrodipicolinate reductase; Provisional; Region:
PRK00048"
/db_xref="CDD:178822"
misc_feature 367342..367710
/locus_tag="RBRH_03182"
/note="Dihydrodipicolinate reductase, N-terminus; Region:
DapB_N; pfam01113"
/db_xref="CDD:144632"
misc_feature order(367360..367362,367366..367371,367375..367377,
367435..367443,367558..367566)
/locus_tag="RBRH_03182"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:187535"
misc_feature 367717..368127
/locus_tag="RBRH_03182"
/note="Dihydrodipicolinate reductase, C-terminus; Region:
DapB_C; pfam05173"
/db_xref="CDD:191215"
gene 368115..368303
/locus_tag="RBRH_03181"
/db_xref="GeneID:9987398"
CDS 368115..368303
/locus_tag="RBRH_03181"
/codon_start=1
/transl_table=11
/product="TolQ protein"
/protein_id="YP_004028059.1"
/db_xref="GI:312795137"
/db_xref="GeneID:9987398"
/translation="MGRAGPALAVVRTRAAHRPQRRCVPCNGWRVPLDNVAGPGPVGE
ALIMTAFGLVVAIPAAIA"
misc_feature <368211..368300
/locus_tag="RBRH_03181"
/note="MotA/TolQ/ExbB proton channel family; Region:
MotA_ExbB; cl00568"
/db_xref="CDD:212236"
gene 368573..371167
/locus_tag="RBRH_03180"
/db_xref="GeneID:9987397"
CDS 368573..371167
/locus_tag="RBRH_03180"
/EC_number="6.1.1.4"
/codon_start=1
/transl_table=11
/product="leucyl-tRNA synthetase"
/protein_id="YP_004028060.1"
/db_xref="GI:312795138"
/db_xref="GeneID:9987397"
/translation="MQDKYVPADVESAAQQAWRDNDVYRSTERADKKKFYCVSMLPYP
SGKLHMGHVRNYTINDVMYRHRRMNGYNVLMPMGWDAFGMPAENAAIANGVPPAKWTY
DNIAYMKKQMQAMGLAIDWSREIATCKPDYYKWNQWLFLKMLEKGIAYKKTGTVNWDP
VDQTVLANEQVVDGRGWRSGAVVQKREIPMYYLRITDYAEQLLQDLHALGWPERVKVM
QHNWIGKSHGVNFGFPYEIDGQQQLLRVFTTRADTIMGVTFAAIAAEHPLATRLARDQ
PALQAFIDECKRGGVAEADMAAMEKKGVSTGFFVKHPLTGADIEVWIGNYVLMSYGEG
AVMGVPAHDERDFAFATKYRLPIKQVIAVQEKVYSTEAWQDWYGDKDAGVCVNSGKYD
GMRYEQAVEVIAADLAAKGLGGKQVTYRLRDWGISRQRYWGTPIPIIHCPRCGDVPVP
EQDLPVLLPEDLVPDGSGNPLAKSEAFMHCTCPRCGADARRETDTMDTFVDSAWYFSR
YACPDAPTMVDARTDYWMPMDQYIGGIEHAILHLLYSRFWAKVMRDLGLTDFSEPATN
LLTQGMVLDQTYYREDAAGKKTWFNPTDVTLSYDDKGRAVSAVLHADGEPVEMGGVEK
MSKSKNNGVDPQHLIDSHGADTARLFTMFAAPPEQSLEWSSAGVEGASRFLRRLWAFG
YAHRATFAERPALDTATLNDTSKTLRREIHSVLKQADFDYQRLQYNTVVSAAMKMLNA
LESAKDVGAAVLYEGYGILLRVLYPVVPHVTYTLWRELGYATQFGTLLDAPWPKVDEQ
ALEQSEVELVLQINGKVRGALKVANDAPRETIEQAALAHEMFDKFGEGKTPKKVVIVP
GRLVNVVV"
misc_feature 368573..371164
/locus_tag="RBRH_03180"
/note="leucyl-tRNA synthetase; Validated; Region: leuS;
PRK00390"
/db_xref="CDD:178996"
misc_feature 368672..>369253
/locus_tag="RBRH_03180"
/note="catalytic core domain of leucyl-tRNA synthetases;
Region: LeuRS_core; cd00812"
/db_xref="CDD:173906"
misc_feature 368717..368728
/locus_tag="RBRH_03180"
/note="HIGH motif; other site"
/db_xref="CDD:173906"
misc_feature 369251..369781
/locus_tag="RBRH_03180"
/note="Leucyl-tRNA synthetase, Domain 2; Region:
tRNA-synt_1_2; pfam13603"
/db_xref="CDD:205781"
misc_feature <369833..>369886
/locus_tag="RBRH_03180"
/note="nucleotidyl transferase superfamily; Region:
nt_trans; cl00015"
/db_xref="CDD:212170"
misc_feature <370049..370561
/locus_tag="RBRH_03180"
/note="nucleotidyl transferase superfamily; Region:
nt_trans; cl00015"
/db_xref="CDD:212170"
misc_feature 370448..370459
/locus_tag="RBRH_03180"
/note="active site"
/db_xref="CDD:173912"
misc_feature 370448..370459
/locus_tag="RBRH_03180"
/note="KMSKS motif; other site"
/db_xref="CDD:173912"
misc_feature 370559..370906
/locus_tag="RBRH_03180"
/note="Anticodon-binding domain of bacterial and
eukaryotic mitochondrial leucyl tRNA synthetases; Region:
Anticodon_Ia_Leu_BEm; cd07958"
/db_xref="CDD:153412"
misc_feature order(370568..370570,370577..370582,370589..370591,
370601..370603,370754..370756,370766..370768,
370775..370780,370787..370789,370796..370798,
370808..370810)
/locus_tag="RBRH_03180"
/note="tRNA binding surface [nucleotide binding]; other
site"
/db_xref="CDD:153412"
gene 371164..371739
/locus_tag="RBRH_03179"
/db_xref="GeneID:9987396"
CDS 371164..371739
/locus_tag="RBRH_03179"
/codon_start=1
/transl_table=11
/product="Rare lipoprotein B precursor"
/protein_id="YP_004028061.1"
/db_xref="GI:312795139"
/db_xref="GeneID:9987396"
/translation="MRAYMTDSKLSRRSCIALVAVALLLSGCGFQLRGDYGFPFKRLA
LVGPGPELGARIQRMVEGGSQTRIVKRTDGADAILSISEGRGTGALTLNAAGQVNEYE
LDYTMSYQLVGADGTVLLPPSVIRINRAMTYSDQYALAKSQEFELLYRDMQNDAVDQL
LRRMSAVRELHPTHGGVRAVAPRAPLPTPPL"
misc_feature 371209..371667
/locus_tag="RBRH_03179"
/note="Lipopolysaccharide-assembly; Region: LptE; cl01125"
/db_xref="CDD:207318"
gene 371753..372910
/locus_tag="RBRH_03178"
/db_xref="GeneID:9987395"
CDS 371753..372910
/locus_tag="RBRH_03178"
/EC_number="2.7.7.7"
/codon_start=1
/transl_table=11
/product="DNA polymerase III subunit delta"
/protein_id="YP_004028062.1"
/db_xref="GI:312795140"
/db_xref="GeneID:9987395"
/translation="MQLRADALESHLAKTLGRLYVVYGDEPLLAQEALARIRAAARAA
GFTERNVFSVERGFDWSLLLGATQSMSLFGERQLIELRIPTGKPGKDGGDALKALAAS
DNPDLLTLIALPRLDAATQKTAWFTALVQAGVAIRIDTIERAQLPNWIAQRLAAQQQR
LVAGDAGRRALQFIAERVEGNLLAAHQEIQKLGLLYPAGELTLEQVQDAVLNVARYDV
FKLNEAMLAGDVARLARMLDGLRGEGEATVLVLWAVVEEIRALARIKRGLTAGKPLAS
LMRENRVWGPRERLMGPALQRVDERSLERALALAARLDRQVKGLCGGVPARVGVAPAR
ASLPPADPWDGLFDLAMTIARPGGSDGGCRTEGGAPRGATATATAMRAIRP"
misc_feature 371753..372820
/locus_tag="RBRH_03178"
/note="DNA polymerase III subunit delta; Reviewed; Region:
holA; PRK05574"
/db_xref="CDD:180139"
misc_feature 371810..372334
/locus_tag="RBRH_03178"
/note="DNA polymerase III, delta subunit; Region:
DNA_pol3_delta; pfam06144"
/db_xref="CDD:203395"
gene 372944..374302
/locus_tag="RBRH_03177"
/db_xref="GeneID:9987394"
CDS 372944..374302
/locus_tag="RBRH_03177"
/EC_number="1.2.1.41"
/codon_start=1
/transl_table=11
/product="gamma-glutamyl phosphate reductase"
/protein_id="YP_004028063.1"
/db_xref="GI:312795141"
/db_xref="GeneID:9987394"
/translation="MQRVTRDGFDLCGLGVHEPTAFTHYGNTKMDIDRYMTDLGRRAR
AASRAIARAPGAAKNAALEQIALAIQGQTDALQRANARDVERARANGHDAAFIDRLTL
SDKALTTMVEGLRQVAALPDPIGEITGMRTRPTGIQVGQMRVPLGVIGIIYESRPNVT
IDAAALCLKSGNATILRGGSEAIESNTTLAALIAEALRTSGLPEDGVQVVSTPDRAAV
GKLITMTDYVDVIVPRGGKRLIQRLVDEARVPMIKHLDGVCHVYVDDGADVGKALAIC
DNAKTHRYGTCNTMETLLVARGIAPTVLPLLGKLYRDKAVELRVDPAARAILADAGVA
PLVDATEADWRTEYLAPVLAIRVVDSVDAAIEHINTYGSAHTDAIVTEHYERAMQFLR
EVDSASVMVNASTRFADGFEYGLGAEIGISNDKLHARGPVGLEGLTSLKYVVLGHGEV
RQ"
misc_feature 373127..374281
/locus_tag="RBRH_03177"
/note="Gamma-glutamyl phosphate reductase (GPR), aldehyde
dehydrogenase families 18 and 19; Region:
ALDH_F18-19_ProA-GPR; cd07079"
/db_xref="CDD:143398"
misc_feature 373127..374266
/locus_tag="RBRH_03177"
/note="gamma-glutamyl phosphate reductase; Region: proA;
TIGR00407"
/db_xref="CDD:161862"
misc_feature 373802..373804
/locus_tag="RBRH_03177"
/note="putative catalytic cysteine [active]"
/db_xref="CDD:143398"
gene 374315..374731
/locus_tag="RBRH_03176"
/db_xref="GeneID:9987393"
CDS 374315..374731
/locus_tag="RBRH_03176"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028064.1"
/db_xref="GI:312795142"
/db_xref="GeneID:9987393"
/translation="MLWIKTFHIVLIASWFAGLFYLPRIFVNLAMETEPAVSRRLLVM
ARKLYRFMSLIAVPALACGLWLWLMVGIGRGQGWMHAKLAIVMLLIVYHAMCGRLLAT
FEREANRRSDRWYRMFNELPVLGLLGAVALVVFKPF"
misc_feature 374318..374728
/locus_tag="RBRH_03176"
/note="Uncharacterized protein family (UPF0093); Region:
UPF0093; pfam03653"
/db_xref="CDD:190704"
gene complement(374743..375759)
/locus_tag="RBRH_03175"
/db_xref="GeneID:9987392"
CDS complement(374743..375759)
/locus_tag="RBRH_03175"
/codon_start=1
/transl_table=11
/product="RpiR family transcriptional regulator"
/protein_id="YP_004028065.1"
/db_xref="GI:312795143"
/db_xref="GeneID:9987392"
/translation="MRRNKGCNCVKSARTRAIAWARTPGYARRCRYTPARRFSTCFAR
YCSRFILPVAATFTMLARIEAMRAQLRPSERKLAGYVCDAPREVLDLSMTELASRAGV
SQPTIARFCHALGCSGFREFKIRLAQGVAQRLPTVYRDVRLDEPAPGIVSKVFDRTIG
ALLEVRNSLSAHSVETAIELLADAARVEFYGAGGSGIAAQDIQHKFFRLGMPSVAYTD
PHTYAMSAALLGPRDVVVAVSNTGRTRDIIGAVHSALQRDAKVIAITHGNSPLARLAT
ISLLANLTEETDVFSPMTSRMSHLVIGDILAVGVALRRGSALVDRLNDAQKVLAQRRV
AVRD"
misc_feature complement(374758..375588)
/locus_tag="RBRH_03175"
/note="Transcriptional regulators [Transcription]; Region:
RpiR; COG1737"
/db_xref="CDD:31923"
misc_feature complement(375364..375588)
/locus_tag="RBRH_03175"
/note="Helix-turn-helix domain, rpiR family; Region:
HTH_6; pfam01418"
/db_xref="CDD:201784"
misc_feature complement(374833..375240)
/locus_tag="RBRH_03175"
/note="RpiR-like protein. RpiR contains a SIS (Sugar
ISomerase) domain, which is found in many phosphosugar
isomerases and phosphosugar binding proteins. In E. coli,
rpiR negatively regulates the expression of rpiB gene.
Both rpiB and rpiA are ribose phosphate...; Region:
SIS_RpiR; cd05013"
/db_xref="CDD:88408"
misc_feature complement(order(375043..375045,375175..375177))
/locus_tag="RBRH_03175"
/note="putative active site [active]"
/db_xref="CDD:88408"
gene 375936..377447
/locus_tag="RBRH_03174"
/db_xref="GeneID:9987391"
CDS 375936..377447
/locus_tag="RBRH_03174"
/EC_number="4.2.1.12"
/codon_start=1
/transl_table=11
/product="phosphogluconate dehydratase"
/protein_id="YP_004028066.1"
/db_xref="GI:312795144"
/db_xref="GeneID:9987391"
/translation="MASLHPRLTAVTDRIIERSKATRRAYLARIEHAQGQFPARGVLS
CANLAHGFAGLEGQDKIAIRAMRQPNIAIVSAYNEMLSAHAPYRDFPDIIKQAAREAG
GIAQFAGGVPAMCDGITQGNAGMELSLFSRETIAMSTAIALTHNMFDAALCLGICDKI
VPGLLIGALQFGHLPTIFVPAGPMTSGLSNDEKAKIRQQFATGAVGRDVLLDSEARAY
HGHGTCTFYGTANSNQLLMEIMGLHLPGAAFVHPHTPLRDALTAEAARRVLQLTAQGA
HYTPIGRVVDEKAIVNGIVALLATGGSTNHTLHLVAIARAAGIVIDWNDFDDLSRAVP
LLAKIYPNGKADINHYHAAGGMAFLTRTLLEAGLLHDDVTTVAGPGLSDHYTREPRLV
DGKLAWVDGPRESHDKAVLRGATEPFQPDGGLRLVQGRLGRGVIKISAVAPQHRRVTA
PAIVFDSQEGVQAAFDRGELERDCVAVVRFQGARANGMPELHPAHAAARCFAG"
misc_feature 375945..377411
/locus_tag="RBRH_03174"
/note="Dehydratase family; Region: ILVD_EDD; cl00340"
/db_xref="CDD:212194"
gene 377338..377772
/locus_tag="RBRH_04049"
/db_xref="GeneID:9987390"
CDS 377338..377772
/locus_tag="RBRH_04049"
/EC_number="4.2.1.12"
/codon_start=1
/transl_table=11
/product="phosphogluconate dehydratase"
/protein_id="YP_004028067.1"
/db_xref="GI:312795145"
/db_xref="GeneID:9987390"
/translation="MSWSAIALLWCDFRGQEPMACPSCTRLTPLLGVLQDKGFRVALV
TDGRMSGASGKVPAVIHLSPEALLDGLLGKVRSGDVITLDAEAGRLDVDVDEAEWACR
ANEKPVHRHEHELGFGRELFGVFRAAALPAEQGASVFGAMTE"
misc_feature <377377..377760
/locus_tag="RBRH_04049"
/note="Dehydratase family; Region: ILVD_EDD; cl00340"
/db_xref="CDD:212194"
gene 377810..378445
/locus_tag="RBRH_03173"
/db_xref="GeneID:9988023"
CDS 377810..378445
/locus_tag="RBRH_03173"
/EC_number="4.1.3.16"
/EC_number="4.1.2.14"
/codon_start=1
/transl_table=11
/product="4-hydroxy-2-ketovalerate aldolase"
/protein_id="YP_004028068.1"
/db_xref="GI:312795146"
/db_xref="GeneID:9988023"
/translation="MKPVSEIVRIGPVIPVLTFESVEQGEHVARALYEGGVTVLEITL
RTAAGLQAIGRASQLAPDIVVGVGTLTTATQVEQAKRAGATFGVSPGLTREIHRAAQD
VGLPLLPGVMTPSDILLALELGYDIVKFFPAQQAGGLDMLQAFSGPFPALRFCPTGGI
TQELATSFLALPNVVCVGGSWLTPRAVLAAQNWAEVTRLARAASQLARPNT"
misc_feature 377825..378433
/locus_tag="RBRH_03173"
/note="keto-hydroxyglutarate-aldolase/keto-deoxy-
phosphogluconate aldolase; Provisional; Region: PRK05718"
/db_xref="CDD:180220"
misc_feature 377831..378406
/locus_tag="RBRH_03173"
/note="KDPG and KHG aldolase; Region: KDPG_aldolase;
cd00452"
/db_xref="CDD:188632"
misc_feature order(377855..377857,377930..377932,377942..377944,
378014..378016,378194..378196,378200..378202,
378278..378280)
/locus_tag="RBRH_03173"
/note="active site"
/db_xref="CDD:188632"
misc_feature order(377942..377944,378014..378016,378020..378022,
378077..378088,378146..378157,378161..378163,
378173..378175,378200..378205,378239..378241,
378251..378256)
/locus_tag="RBRH_03173"
/note="intersubunit interface [polypeptide binding]; other
site"
/db_xref="CDD:188632"
misc_feature 378194..378196
/locus_tag="RBRH_03173"
/note="catalytic residue [active]"
/db_xref="CDD:188632"
gene 378739..380100
/locus_tag="RBRH_03172"
/db_xref="GeneID:9987389"
CDS 378739..380100
/locus_tag="RBRH_03172"
/codon_start=1
/transl_table=11
/product="gluconate permease"
/protein_id="YP_004028069.1"
/db_xref="GI:312795147"
/db_xref="GeneID:9987389"
/translation="MAAAHGTMLLIYAVIAIAALVLLITRFKVYPFLVLIIVSLLLGL
AAGMPPETIVKSFEAGNGNTLGHIAVVVGLGTMLGKMMAESGGAERIAMTLIGWFGEK
NIHWAMMFVAVIVGLPVFFEVGFVLLIPIAFNVAKRTGKSLLLVGLPMVAGLSVVHGL
IPPHPAAMLALQQYHADIGRTIAYGLIVGVPTAIIAGPLFALLIHRAIKLPADNPLAA
QFIQSAPATQQRELPGFGITLMTILLPVILMLAGSWADLVLPTNTRANDVLRFLGNSD
VALLIAVLVSFWTFGARRGFTREQIQRFCGDCLAPIAGITLIVGAGGGFGRILMDSGI
SKEIIGAATQHNLSPLVLGWLVAALIRLATGSATVAMTTACGIVAPIAAAGTVQATPE
LLVLATGSGSLIFSHVNDGGFWLIKEYFGMTVTQTFKTWSLCETIISVVGLLLALTLG
MVL"
misc_feature 378811..380055
/locus_tag="RBRH_03172"
/note="GntP family permease; Region: GntP_permease;
pfam02447"
/db_xref="CDD:111353"
misc_feature 378814..380055
/locus_tag="RBRH_03172"
/note="Na+-H+ antiporter family; Region: Na_H_antiport_2;
cl15264"
/db_xref="CDD:210060"
gene complement(380221..381099)
/locus_tag="RBRH_03171"
/db_xref="GeneID:9987388"
CDS complement(380221..381099)
/locus_tag="RBRH_03171"
/codon_start=1
/transl_table=11
/product="transposase"
/protein_id="YP_004028070.1"
/db_xref="GI:312795148"
/db_xref="GeneID:9987388"
/translation="MKPSRLRELTTDLMQRFGVSQRQACRVLKLSRSVYSYQSIARDS
NAIALRIKQITQTRVHYGYRRVHVMLRREGWRDNHKRVYRLYREQGLSLRHKRPRRNK
AARLRQPKQLVTAINEIWSMDFVADALFDGRRLRTLTIVDNYTRECLAIEVGATLRGE
DVVAALDRIAVSRPLPRFIKADNGSEFISKVLDKWAYERGVEIDFSRPGKPTDNAKNE
SFNGRLREECLNEHWFLSLEDAKRKIEAWRQYYNEARPHSALQWMTPAEFACQCRPRA
DSAHPEEPEISTLERH"
misc_feature complement(380803..380976)
/locus_tag="RBRH_03171"
/note="HTH-like domain; Region: HTH_21; pfam13276"
/db_xref="CDD:205456"
misc_feature complement(380287..380973)
/locus_tag="RBRH_03171"
/note="insertion element IS2 transposase InsD;
Provisional; Region: PRK14702"
/db_xref="CDD:173165"
misc_feature complement(380416..380751)
/locus_tag="RBRH_03171"
/note="Integrase core domain; Region: rve; pfam00665"
/db_xref="CDD:201381"
misc_feature complement(380305..380505)
/locus_tag="RBRH_03171"
/note="Integrase core domain; Region: rve_3; pfam13683"
/db_xref="CDD:205859"
gene complement(381096..381362)
/locus_tag="RBRH_01683"
/db_xref="GeneID:9987387"
CDS complement(381096..381362)
/locus_tag="RBRH_01683"
/codon_start=1
/transl_table=11
/product="transposase"
/protein_id="YP_004028071.1"
/db_xref="GI:312795149"
/db_xref="GeneID:9987387"
/translation="MKKSRYTEEQITFALKQAELGTPAAEVCRKMGISDATFYNWRQK
YGGLGPSELRRLKQLEEENTKLKRLVAELSLDKSMLQDVLSKKL"
misc_feature complement(381147..381359)
/locus_tag="RBRH_01683"
/note="Transposase; Region: HTH_Tnp_1; pfam01527"
/db_xref="CDD:201841"
misc_feature complement(order(381240..381248,381252..381257,
381351..381359))
/locus_tag="RBRH_01683"
/note="DNA-binding interface [nucleotide binding]; DNA
binding site"
/db_xref="CDD:119388"
gene 381459..381986
/locus_tag="RBRH_01682"
/db_xref="GeneID:9986333"
CDS 381459..381986
/locus_tag="RBRH_01682"
/EC_number="2.7.1.12"
/codon_start=1
/transl_table=11
/product="gluconokinase"
/protein_id="YP_004028072.1"
/db_xref="GI:312795150"
/db_xref="GeneID:9986333"
/translation="MRCGPVERVMILIVMGVSGAGKTRVGELLAERLGCPFTDGDALH
SDANKDKMSRGIALTDADRWPWLRTLRAAIEQQQRAGETAVFTCSSLKRSYRDVLRHG
DSDVVFVYLKGTFQVLRARLGHRTGHFFDPSLLQSQLDTLEEPGLDEAITVSIDEPPE
RIVDRVLERLAARTR"
misc_feature 381489..381926
/locus_tag="RBRH_01682"
/note="Gluconate kinase (GntK) catalyzes the phosphoryl
transfer from ATP to gluconate. The resulting product
gluconate-6-phoshate is an important precursor of
gluconate metabolism. GntK acts as a dimmer composed of
two identical subunits; Region: GntK; cd02021"
/db_xref="CDD:30194"
misc_feature 381501..381980
/locus_tag="RBRH_01682"
/note="Gluconate kinase [Carbohydrate transport and
metabolism]; Region: GntK; COG3265"
/db_xref="CDD:33076"
misc_feature order(381504..381527,381573..381575,381579..381581,
381819..381821,381831..381833)
/locus_tag="RBRH_01682"
/note="ATP-binding site [chemical binding]; other site"
/db_xref="CDD:30194"
misc_feature order(381510..381515,381831..381833)
/locus_tag="RBRH_01682"
/note="Gluconate-6-phosphate binding site [chemical
binding]; other site"
/db_xref="CDD:30194"
gene complement(382047..383435)
/locus_tag="RBRH_01681"
/db_xref="GeneID:9986332"
CDS complement(382047..383435)
/locus_tag="RBRH_01681"
/EC_number="4.3.2.2"
/codon_start=1
/transl_table=11
/product="adenylosuccinate lyase"
/protein_id="YP_004028073.1"
/db_xref="GI:312795151"
/db_xref="GeneID:9986332"
/translation="MSDTRPDTLFALTALSPLDGRYAAKTEALRDWLSEAAFMRHRVT
VEVHWLIALSQAGLPGIPAFSAPSEQFLLQLVERFSPHDAARIKDIERVTNHDVKAVE
YWLKESVKGQAELERASEFIHFACTSEDINNTSHGLMLKGAREHVILPALRTVHQRLV
ALAHAHAAQPMLSRTHGQPASPTTLGKEIANVAARLSRAIDRIATVTLLGKMNGAVGN
FNAHLSAYPDFDWEAFARDVVQTRLGLTFNPYTIQIEPHDYMAELFDAIARANTILLD
LDRDVWGYISLGYFKQKTKAGEIGSSTMPHKVNPIDFENSEGNLGLANATLRHLADKL
PVSRWQRDLTDSTVLRNIGVAFGYALLAYDALIRGLDKLEVNPQRLDEDLDGCWEVLA
EPVQTVMRRYGIENPYEQLKELTRGKGITRDGLHAFIGTLAIPDEVKTRLLAMTPASY
VGKAVELAQRIG"
misc_feature complement(382053..383414)
/locus_tag="RBRH_01681"
/note="adenylosuccinate lyase; Provisional; Region:
PRK09285"
/db_xref="CDD:181757"
misc_feature complement(382080..383351)
/locus_tag="RBRH_01681"
/note="PurB_like adenylosuccinases (adenylsuccinate lyase,
ASL); Region: PurB; cd01598"
/db_xref="CDD:176470"
misc_feature complement(order(382083..382085,382371..382373,
382386..382388,382392..382397,382407..382427,
382437..382442,382449..382454,382461..382466,
382470..382475,382482..382484,382494..382496,
382509..382514,382578..382583,382587..382592,
382596..382598,382608..382610,382629..382631,
382650..382652,382662..382664,382683..382688,
382692..382694,382764..382766,382773..382784,
382830..382835,382851..382856,382863..382865,
382872..382877,382893..382895,382899..382916,
383061..383066,383070..383075,383118..383120,
383145..383147,383331..383336))
/locus_tag="RBRH_01681"
/note="tetramer interface [polypeptide binding]; other
site"
/db_xref="CDD:176470"
misc_feature complement(order(382494..382496,382509..382511,
382515..382517,382677..382679,382908..382910,
383067..383069,383148..383150))
/locus_tag="RBRH_01681"
/note="active site"
/db_xref="CDD:176470"
gene complement(383679..384821)
/locus_tag="RBRH_01680"
/db_xref="GeneID:9986331"
CDS complement(383679..384821)
/locus_tag="RBRH_01680"
/EC_number="2.1.1.61"
/codon_start=1
/transl_table=11
/product="tRNA (5-methyl
aminomethyl-2-thiouridylate)-methyltransferase"
/protein_id="YP_004028074.1"
/db_xref="GI:312795152"
/db_xref="GeneID:9986331"
/translation="MAKQRVVIGMSGGVDSSVAAWLLKQQGYEVVGLFMKNWEDDDDS
EYCSSRQDWIDVVSVADLIGIDVEAVNFAAQYKDRVFAEFLREYSAGRTPNPDVLCNA
EIKFKAFLDHAMALGAQTIATGHYARVRRIGERFELLKALDSSKDQSYFLHRLNQSQL
SRTLFPLGELPKTRVREIAAQIGLPNAAKKDSTGICFIGERPFRTFLNRYLPTRPGPM
RTPDGKVVGEHIGLAFYTLGQRKGIGLGGSRDGSGEPWFVAGKDMAGNTLYVVQGHDH
PWLLSSTLQAENASWIAGAAPQDGHSCTAKTRYRQQDAACTFQHAPDRHFALHFAQSQ
WAVTPGQSAVLYDGDVCLGGGIIGATSAPSTPAAAYRRTTDAATDS"
misc_feature complement(383751..384812)
/locus_tag="RBRH_01680"
/note="tRNA methyl transferase; Region: tRNA_Me_trans;
pfam03054"
/db_xref="CDD:202518"
misc_feature complement(383751..384809)
/locus_tag="RBRH_01680"
/note="tRNA methyl transferase. This family represents
tRNA(5-methylaminomethyl-2-thiouridine)-methyltransferase
which is involved in the biosynthesis of the modified
nucleoside 5-methylaminomethyl-2-thiouridine present in
the wobble position of some tRNAs; Region: tRNA_Me_trans;
cd01998"
/db_xref="CDD:30185"
misc_feature complement(order(384714..384716,384720..384722,
384774..384785,384789..384797))
/locus_tag="RBRH_01680"
/note="Ligand Binding Site [chemical binding]; other site"
/db_xref="CDD:30185"
gene complement(384911..385543)
/locus_tag="RBRH_01678"
/db_xref="GeneID:9986330"
CDS complement(384911..385543)
/locus_tag="RBRH_01678"
/codon_start=1
/transl_table=11
/product="phosphohydrolase"
/protein_id="YP_004028075.1"
/db_xref="GI:312795153"
/db_xref="GeneID:9986330"
/translation="MPAVPLRSGRRRDAATLGGAPADGLTRLSGPAALATRMRPPAAP
DSGTMLDLMDTQLWAPHVTVAAIIEHEQRFLLVEEHTPNGLRLNQPAGHLEPSETLLE
AVVRETLEETGHVFTPQALVGVYVAQFEREHGVPATYVRFTYCGTATHDPIPRELDPD
ILRTVWLSADALRAQASRHRTPLVLRCVEDYLAGRRYPLEFVQSHPAVLR"
misc_feature complement(384950..385360)
/locus_tag="RBRH_01678"
/note="Contains a crystal structure of the Nudix hydrolase
from Nitrosomonas europaea, which has an unknown function.
In general, members of the Nudix hydrolase superfamily
catalyze the hydrolysis of NUcleoside DIphosphates linked
to other moieties, X. Enzymes...; Region:
Nudix_Hydrolase_2; cd03675"
/db_xref="CDD:72895"
misc_feature complement(385202..385270)
/locus_tag="RBRH_01678"
/note="nudix motif; other site"
/db_xref="CDD:72895"
gene complement(385544..386467)
/locus_tag="RBRH_01677"
/db_xref="GeneID:9986329"
CDS complement(385544..386467)
/locus_tag="RBRH_01677"
/EC_number="2.1.1.-"
/codon_start=1
/transl_table=11
/product="methyltransferase"
/protein_id="YP_004028076.1"
/db_xref="GI:312795154"
/db_xref="GeneID:9986329"
/translation="MVRRQPHVAGRRDRDQVAAAQSGIHDAAHQGRDLRPTARADRGT
AQHRHRRTRRAGAGVRDRHGLHAVPGHLRRAVVQARMATGQRRRAIARESGRRHPAAD
RLDTRHAAGRSNVRQRHVHRRGRADRTRHRAGRGPAFRLRKSHALRCRRVAAPEGASA
GRQARGWRARRAGRCTVDLRQRRVRRHARQGRRKPAARRRTNGPAQATRCARHRGTMR
HTGRAGGQSALRRANRHARPRRPHGRWRRHGIPARPSGRCGQRVLPLVRRRAQAAVPR
LARVRAQRRSYAARPDAAARIDEDAVVQRRA"
gene 386528..386917
/locus_tag="RBRH_04048"
/db_xref="GeneID:9986328"
CDS 386528..386917
/locus_tag="RBRH_04048"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028077.1"
/db_xref="GI:312795155"
/db_xref="GeneID:9986328"
/translation="MAIFNRIRLAIRECRLAAMAAAHAPLNGTPPGAGACTANVGSAA
SADNSPSSTASAPSRPRGQGAKNSRRVAKDMEDESGAKRTSAYCTWPRDGWGSPGSRG
AWLWAPPRPPHRPVQPPEGALPSRGRW"
gene 386788..387288
/locus_tag="RBRH_04047"
/db_xref="GeneID:9988022"
CDS 386788..387288
/locus_tag="RBRH_04047"
/codon_start=1
/transl_table=11
/product="protein translocase subunit YajC"
/protein_id="YP_004028078.1"
/db_xref="GI:312795156"
/db_xref="GeneID:9988022"
/translation="MYVATRRVGQPRIPRRLAVGAAASAASARTAARGCFAVPGQMVE
CPAISTFYHGETHVFISNAYAQAAPAAGGAAGFIQTYGFFILMIAVLYFFMIRPQMKR
QKEHRNMLAAMTKGDEVLTSGGIVGKVTKVGEAYVGVELSDGVEVTVQKSAVSAILPK
GTIKSL"
misc_feature <387034..387285
/locus_tag="RBRH_04047"
/note="preprotein translocase subunit YajC; Validated;
Region: yajC; PRK05585"
/db_xref="CDD:180149"
gene 387400..389457
/locus_tag="RBRH_01676"
/db_xref="GeneID:9988021"
CDS 387400..389457
/locus_tag="RBRH_01676"
/codon_start=1
/transl_table=11
/product="protein translocase subunit secD"
/protein_id="YP_004028079.1"
/db_xref="GI:312795157"
/db_xref="GeneID:9988021"
/translation="MNRYPLWKYVVMLVALAIGLLYTLPNFFGEAPAVQVSSGKATVK
LDSSVLNTVESTLAANGVQADDVTFDNASQNANIRVRLKDTDTQLRVKDLLQKALNAD
PADPTYIVALNLQSASPRWLASLHALPMYLGLDLRGGVHFLLQVDLAGALNKKLDADA
ADARTLLRDKSIRAGGVNRVGQTVVVNFVDQDVANRARQLLSDNVTELTWQVQPAAGG
YQVVGAFTPAAQKTVQDSALKQNITTLHNRVNELGVAEPIVQQQGADRIVVELPGVQD
TAKAKDIIGRTATLEARMADYQNPVRNINDPVPVGDDLFTQGNGAPVYLKKQVIFTGD
RITDASAGFDEHQRPAVKIRLDARGGRVLRDVSRDNIGKPMAIVLFEKNKGELLTVAT
IQSELGENFQITGQPTPQAATDLALLLRAGSLAAPMEIIEERTIGPSLGADNIRKGFD
SVQYGFAAIAVFMIAYYMLFGLISVIALSVNLLLLVAVLSMMQATLTLPGIAAIALAL
GMAIDANVLINERIREELRRGAPAQLAIQNGFSHAWATILDSNVTTLIAGLALLAFGS
GPVRGFAVVHCIGILTSMFSAVFFARGLVNLWYGGKKKLKSLAIGQVWRPEGTLAAYA
ESAQQGAGGAAQALPRTSDAKRPGPKRAVRRNAPAAPRPGDAPPSERTPQRDAPTKPG
QSR"
misc_feature 387400..387735
/locus_tag="RBRH_01676"
/note="SecD export protein N-terminal TM region; Region:
SecD-TM1; pfam13721"
/db_xref="CDD:205896"
misc_feature 387739..389232
/locus_tag="RBRH_01676"
/note="preprotein translocase subunit SecD; Reviewed;
Region: secD; PRK05812"
/db_xref="CDD:180271"
misc_feature 388699..389163
/locus_tag="RBRH_01676"
/note="Protein export membrane protein; Region: SecD_SecF;
cl14618"
/db_xref="CDD:199094"
gene 389476..390426
/locus_tag="RBRH_01675"
/db_xref="GeneID:9986327"
CDS 389476..390426
/locus_tag="RBRH_01675"
/codon_start=1
/transl_table=11
/product="protein translocase subunit secF"
/protein_id="YP_004028080.1"
/db_xref="GI:312795158"
/db_xref="GeneID:9986327"
/translation="MEFFRIRKDIPFMQRALIFNVISLVTFLLAVFFLLHRGLHLSVE
FTGGTVLEIHTPQAAQVDPIRGALDKIGYADAQVQTFGTSRDVLIRLPLKGGLSSAQQ
SDQVMAALNELDAQIKLQRVEFVGPQVGKELATDGLLALACVVVGIVIYLSFRFEWKY
AIAGIIANLHDVVIILGFFAFFQWEFSLSVLAAVLAVLGYSVNESVVIFDRIRETFRR
ERKMTVTEVINHAITSTMSRTIITHGSTQMMVLSMLLFGGLTLHYFALALTIGILFGI
YSSVFVAAALAMWLGVKREDLIKEKKTGYDPNDPNAGAQV"
misc_feature 389494..390366
/locus_tag="RBRH_01675"
/note="preprotein translocase subunit SecF; Reviewed;
Region: secF; PRK13022"
/db_xref="CDD:183847"
misc_feature 389788..390354
/locus_tag="RBRH_01675"
/note="Protein export membrane protein; Region: SecD_SecF;
pfam02355"
/db_xref="CDD:111266"
gene complement(390525..391820)
/locus_tag="RBRH_01674"
/db_xref="GeneID:9986326"
CDS complement(390525..391820)
/locus_tag="RBRH_01674"
/codon_start=1
/transl_table=11
/product="Citrate-proton symporter"
/protein_id="YP_004028081.1"
/db_xref="GI:312795159"
/db_xref="GeneID:9986326"
/translation="MGASVSLSSVTPTVQPKVWRAVAAASIGNALEWFDLVAYGFFAV
VISRQFFPAGNDTISLLLTLGTFGVSFFMRPLGAIVLGAYADRAGRRAALSLTILLMM
AGTLIIAVLPNYATIGLAAPLILVIARLLQGFSAGGEFGSATAFLAEHMPQRRGFFSS
WQVASQGLTTLLAASFGVILNGNLSSAQMDAWGWRIPFFFGLLIGPVAWYIRKHVDET
PEFVAAEMSSKTTLTPVRDTLATQKERLLIAIGVVILATVSTYVVLFMPTFAVKQLGL
PASASFAAILLTGMIQLVVSPLVGHWSDQHGRTGIMLASAIAILVLIYPAFATLVSHP
TLATLLVVQIIFGFLMSGYFATLPGLLSEIFPVSTRTTGLSLSYNIAVTIFGGFAPFI
ISWLIASTGTKVAPGFYMIFAAAISIVALFAVRLRLAVR"
misc_feature complement(390528..391799)
/locus_tag="RBRH_01674"
/note="citrate-proton symporter; Provisional; Region:
PRK15075"
/db_xref="CDD:185034"
misc_feature complement(390555..391757)
/locus_tag="RBRH_01674"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature complement(order(390663..390665,390672..390677,
390684..390689,390699..390704,390735..390737,
390744..390749,390759..390761,390768..390773,
390780..390782,390933..390935,390945..390947,
390954..390956,390966..390968,390978..390980,
391020..391022,391029..391034,391041..391046,
391053..391055,391311..391313,391329..391334,
391341..391346,391377..391379,391386..391391,
391398..391403,391410..391415,391575..391580,
391584..391589,391599..391601,391608..391613,
391620..391622,391689..391694,391698..391706,
391713..391715))
/locus_tag="RBRH_01674"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
gene complement(392028..392234)
/locus_tag="RBRH_01673"
/db_xref="GeneID:9986325"
CDS complement(392028..392234)
/locus_tag="RBRH_01673"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028082.1"
/db_xref="GI:312795160"
/db_xref="GeneID:9986325"
/translation="MHGITKPLKLKLTLDSFQCKQHPMLKRWWCGADAKASFNRADFG
LDYGQSYGFNMQTTLQIQVEGIKQ"
misc_feature complement(392031..>392234)
/locus_tag="RBRH_01673"
/note="YceI-like domain; Region: YceI; cl01001"
/db_xref="CDD:207280"
gene 392340..392657
/locus_tag="RBRH_01672"
/db_xref="GeneID:9986324"
CDS 392340..392657
/locus_tag="RBRH_01672"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028083.1"
/db_xref="GI:312795161"
/db_xref="GeneID:9986324"
/translation="MLRWTAAWRLPEPSNPYGPYRADCVSPVRRAALQARTASGHSRA
LRSLWRGVVSWPVRAAGPSERDDACRVDHVRDCAGRADRSVGDQRDRHADYAGRRHCR
AVG"
gene 392688..393680
/locus_tag="RBRH_01671"
/db_xref="GeneID:9986323"
CDS 392688..393680
/locus_tag="RBRH_01671"
/codon_start=1
/transl_table=11
/product="Paraquat-inducible protein A"
/protein_id="YP_004028084.1"
/db_xref="GI:312795162"
/db_xref="GeneID:9986323"
/translation="MLHDAVSARRIVCAALLAVLVARWHSPVCVRRVVADDPVDPAVG
HDRGVHARHSRRTGQAVESGGHAPGSGAVRVWRADADDRIGGDVRSPRAMGGRGPTRR
RRHHVQPRGEAFMSTPRTTYPSARRAGLVTCHACGLVSPLVRTGQRQCCARCGATLHV
RKPDSIARTYAFLIAAAIMYVPANLLPVMHTSSLLGSQDDTIMSGVVYFWTSGDWPLA
VIVFVASILVPMLKLAVLTLLTVTAQIGSRWRPLQRTRLYRGVEAIGRWSMLDIFVIT
LTVALVRFHSLAEITAGPGAVAFGVVVVLTMIASMQFDPRLIWDNIESSGKEHE"
misc_feature 393180..393659
/locus_tag="RBRH_01671"
/note="Paraquat-inducible protein A; Region: PqiA;
pfam04403"
/db_xref="CDD:203002"
gene 393673..395346
/locus_tag="RBRH_01670"
/db_xref="GeneID:9986322"
CDS 393673..395346
/locus_tag="RBRH_01670"
/codon_start=1
/transl_table=11
/product="Paraquat-inducible protein B"
/protein_id="YP_004028085.1"
/db_xref="GI:312795163"
/db_xref="GeneID:9986322"
/translation="MNNKNNATGTGSPEAGPGDPLGAADGGVPPHLPEPVVQRTSRWL
PSLVWVIPLIAALVGVSLFVKTVLERGPTITITFRTAEGLEPGKTQVKYKDVVIGAVK
TITLSKDLATVLVTVELTKQAEGFAVDDTRFWVVRPRVAASGVSGLNTLLSGAYIGVD
AGRSRETRKQFLGLEQPPPITRDQSGHQFVLHGDSLGSVDIGSPVFYRRVQVGQVVGY
SLDPNGTGVTMQVFVNAPYDQYVGENTRWWHASGVDLRLDSGGFKLNTQSLAAMVIGG
IAFQSPPSEPVGAQARNDAHFRLASDEADAMRASDGEAVPFVLNFNQSLRGLSVGAPV
DFRGIVLGRVRSIGIDYDPVRHAFLMPVTVELYPDRLGPRVREAARTGGVRARATMIE
SLVKSGLRAQLRTGNLITSQLYVALDLFPNAPPAKVNMSRSPIELPTVPNTLDELQLQ
VADIAKKLDKVPFDEIGVRLNSTLKRANSLFKQLDTQLAPQAKDTLSTAQRTFHAAQS
SLQQDSPLQTDVRQALQQLTRTLQSLNALSDYLERHPESLLRGKGRDQP"
misc_feature 393772..395328
/locus_tag="RBRH_01670"
/note="Paraquat-inducible protein B [General function
prediction only]; Region: PqiB; COG3008"
/db_xref="CDD:32825"
misc_feature 393880..394158
/locus_tag="RBRH_01670"
/note="mce related protein; Region: MCE; pfam02470"
/db_xref="CDD:111376"
misc_feature 394228..>394410
/locus_tag="RBRH_01670"
/note="mce related protein; Region: MCE; pfam02470"
/db_xref="CDD:111376"
misc_feature 394615..394926
/locus_tag="RBRH_01670"
/note="mce related protein; Region: MCE; pfam02470"
/db_xref="CDD:111376"
gene 395343..396065
/locus_tag="RBRH_01669"
/db_xref="GeneID:9986321"
CDS 395343..396065
/locus_tag="RBRH_01669"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028086.1"
/db_xref="GI:312795164"
/db_xref="GeneID:9986321"
/translation="MKSCRSPRRCIAHIAPLAVLCAAALLASACGSVVPDRFYTLAGP
ARGAPRAAPAQFYIELMPVDVPQQVARSQFVVTTGPGQVALLEHERWSAPLSDEMGRA
LSDEVSRALGAIDVYRTPHPATSPVFRIHVNVQRFESAPGAHAGLEATWSVRALPDGV
PVTCHSTIEEPVAAGYEALVAGHRRALQRLSADIADVVRELVQHRCATSACAAPPSGR
TGTRIAPTGPAPDSALRCPAST"
misc_feature 395430..395945
/locus_tag="RBRH_01669"
/note="Uncharacterized protein conserved in bacteria
[Function unknown]; Region: COG3009"
/db_xref="CDD:32826"
misc_feature 395505..395927
/locus_tag="RBRH_01669"
/note="Protein of unknown function (DUF330); Region:
DUF330; pfam03886"
/db_xref="CDD:190782"
gene complement(396082..397212)
/locus_tag="RBRH_01668"
/db_xref="GeneID:9986320"
CDS complement(396082..397212)
/locus_tag="RBRH_01668"
/EC_number="2.4.2.29"
/codon_start=1
/transl_table=11
/product="queuine tRNA-ribosyltransferase"
/protein_id="YP_004028087.1"
/db_xref="GI:312795165"
/db_xref="GeneID:9986320"
/translation="MLKFDLLRTDGLARRGRLTLNHGTIDTPIFMPVGTYGTVKAMAP
RELEDIRAQIILGNTFHLWLRPGLDTITAHGGLHRFMGWQRPILTDSGGFQVFSLGEL
RTITEDGVTFASPINGDRLFLSPEVSMQVQKVLNSDIVMQFDECTPYATDGVPTSHDA
TARSMQMSLRWAKRSLDEFRRLANPNALFGIVQGGMYEALRDESLAGLSDLGFDGYAI
GGLSVGEPKEDMLRVLQHIGPRLPLDKPHYLMGVGTPEDLVAGVAAGIDMFDCVMPTR
NARNGWLFTRFGDLKIRNAMHRNDTRPLDESCVCHTCRHFSRAYLHHLHRVGEILGAQ
LNTIHNLHYYLNLMQEIRDAIEAGTFNAFVTRFHADRARGVE"
misc_feature complement(396103..397212)
/locus_tag="RBRH_01668"
/note="queuine tRNA-ribosyltransferase; Provisional;
Region: tgt; PRK00112"
/db_xref="CDD:178873"
misc_feature complement(396091..397203)
/locus_tag="RBRH_01668"
/note="Queuine/archaeosine tRNA-ribosyltransferase
[Translation, ribosomal structure and biogenesis]; Region:
Tgt; COG0343"
/db_xref="CDD:30691"
gene complement(397277..398356)
/locus_tag="RBRH_01667"
/db_xref="GeneID:9986319"
CDS complement(397277..398356)
/locus_tag="RBRH_01667"
/EC_number="5.-.-.-"
/codon_start=1
/transl_table=11
/product="S-adenosylmethionine--tRNA
ribosyltransferase-isomerase"
/protein_id="YP_004028088.1"
/db_xref="GI:312795166"
/db_xref="GeneID:9986319"
/translation="MPLRYPSHFMYTLSDFDFDLPPELIAQHALPERSASRLLEVTPS
GALLDRHFGELPACLEPGDLLVFNDTKVLKARFDGIKASGGRVEVLIERVTGPRTALA
QIRASKRPAPGSTIRLADAFDVTVGERVEPFHTLHFPHDCIELIDQHGRLPLPPYIEH
TPDTYDEARYQTVFATTPGAVAAPTAGLHFDAPTLAALDARGVRRATLTLHVGAGTFQ
PVRTDDIAQHKMHSEWYNIPPALVEAIEATRAAKRSVIAVGTTSMRALEAAARDAERD
GRELHAVRAETDIFITPGYPFRVIDRLVTNFHLPKSTLLMLVSAFAGVEPIRRAYRHA
IAQRYRFFSYGDAMLLTRAASVAQR"
misc_feature complement(397304..398320)
/locus_tag="RBRH_01667"
/note="Queuosine biosynthesis protein; Region:
Queuosine_synth; pfam02547"
/db_xref="CDD:202279"
misc_feature complement(397304..398320)
/locus_tag="RBRH_01667"
/note="S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; Provisional; Region: queA;
PRK00147"
/db_xref="CDD:178900"
gene complement(398372..398557)
/locus_tag="RBRH_01666"
/db_xref="GeneID:9986318"
CDS complement(398372..398557)
/locus_tag="RBRH_01666"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028089.1"
/db_xref="GI:312795167"
/db_xref="GeneID:9986318"
/translation="MPTARRRGAQAPRRRLRWHRQARRRVHLIAVTPAADDGTKTSGY
RKYNIDFIGTALHCASG"
gene 398491..400752
/locus_tag="RBRH_01665"
/db_xref="GeneID:9986317"
CDS 398491..400752
/locus_tag="RBRH_01665"
/EC_number="3.6.1.-"
/codon_start=1
/transl_table=11
/product="ATP-dependent DNA helicase recG"
/protein_id="YP_004028090.1"
/db_xref="GI:312795168"
/db_xref="GeneID:9986317"
/translation="MPGDASAGGAAAPARRGAGPSARKRLPAAMVGDKAAVQAADDTA
AQAADSPAVKPAGKASTQPAGKSGAKPSDKLARLGLVRDIDLVLHLPMRYEDETTLTP
IGQLLPGMTAQVQGEVVDNEIAYRPRRQMLVRLRDEHGDVLMLRFLNFWGSQARQLAS
GARLRVRGDVRGGFFGMEMVHPAYRVVEDDTPLPDALTPVYSSTAGVSQAYLRRAIDS
ALQRTPLPELLPPQIADAFLAPLGVPSLADAVRTLHHPRADADEAALMERTHPAWLRI
KFEELLAQQLSLKRAHDERRLRAAPAMARRPAADRDALVTRLHAALPFQLTGAQQRAS
EQIAADLAAAHPMQRLLQGDVGSGKTVVAALAAAQAIDAGYQAALMAPTELLAEQHAR
KLRGWLEPLGVRTAWLAGSLKARDKRAALEAVASGDAPLVIGTHAMIQEAVKFARLGL
VIVDEQHRFGVEQRLALRAKAQAEAAVSGFQPHQLMMSATPIPRTLAMTYYADLDVST
IDELPPGRTPVLTKLVSDARRDEVIARVREAALAGRQVYWVCPLIEESEALQLQTAVD
TYETLVAALPQLQVGLVHGRLAAADKADVMARFTRNEIHLLVATTVIEVGVDVPNASL
MVVEHAERFGLAQLHQLRGRVGRGSQSSVCLLMYASPLSLAARERLRTMRETTDGFEI
ARRDLEIRGPGEFLGARQSGAAMLRFADIEQDAWLIEPARRAAERLLGEYPQAAAAHL
TRWLGSREQYLKA"
misc_feature 398692..400749
/locus_tag="RBRH_01665"
/note="ATP-dependent DNA helicase RecG; Provisional;
Region: PRK10917"
/db_xref="CDD:182836"
misc_feature 398827..399051
/locus_tag="RBRH_01665"
/note="RecG_wedge_OBF: A subfamily of OB folds
corresponding to the OB fold found in the N-terminal
(wedge) domain of Escherichia coli RecG. RecG is a
branched-DNA-specific helicase, which catalyzes the
interconversion of a DNA replication fork to a...; Region:
RecG_wedge_OBF; cd04488"
/db_xref="CDD:72960"
misc_feature order(398827..398829,398977..398979,398983..398985,
398989..398991,399046..399048)
/locus_tag="RBRH_01665"
/note="generic binding surface II; other site"
/db_xref="CDD:72960"
misc_feature order(398860..398862,398881..398883,398932..398934,
398947..398949,399025..399027)
/locus_tag="RBRH_01665"
/note="ssDNA binding site; other site"
/db_xref="CDD:72960"
misc_feature 399535..399963
/locus_tag="RBRH_01665"
/note="DEAD-like helicases superfamily. A diverse family
of proteins involved in ATP-dependent RNA or DNA
unwinding. This domain contains the ATP-binding region;
Region: DEXDc; cd00046"
/db_xref="CDD:28927"
misc_feature 399556..399570
/locus_tag="RBRH_01665"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28927"
misc_feature 399850..399861
/locus_tag="RBRH_01665"
/note="putative Mg++ binding site [ion binding]; other
site"
/db_xref="CDD:28927"
misc_feature 400060..400461
/locus_tag="RBRH_01665"
/note="Helicase superfamily c-terminal domain; associated
with DEXDc-, DEAD-, and DEAH-box proteins, yeast
initiation factor 4A, Ski2p, and Hepatitis C virus NS3
helicases; this domain is found in a wide variety of
helicases and helicase related proteins; may...; Region:
HELICc; cd00079"
/db_xref="CDD:28960"
misc_feature order(400141..400152,400240..400245,400318..400326)
/locus_tag="RBRH_01665"
/note="nucleotide binding region [chemical binding]; other
site"
/db_xref="CDD:28960"
misc_feature order(400342..400344,400408..400410,400420..400422,
400429..400431)
/locus_tag="RBRH_01665"
/note="ATP-binding site [chemical binding]; other site"
/db_xref="CDD:28960"
gene 400972..401931
/locus_tag="RBRH_01664"
/db_xref="GeneID:9986316"
CDS 400972..401931
/locus_tag="RBRH_01664"
/codon_start=1
/transl_table=11
/product="Hydrogen peroxide-inducible genes activator"
/protein_id="YP_004028091.1"
/db_xref="GI:312795169"
/db_xref="GeneID:9986316"
/translation="MTLTELKYIVAVARERHFGRAAEACFVSQPTLSVAIKKLEDELN
VQIFERGTSEVSVTPIGEQIVTQAQRVLEQTLAIKEIAKQGKDPLVGPLRLGVIYTIG
PYLLPALVKQMIETVPQMPLMLQENFTLKLIELLKQGEIDVAIMALPFPETGLMVRPL
YDEPFVVALPAGHPWERRNAINAEDLKQETMLLLGSGHCFRDHVLGVCPELMRFSQNA
DGIQKTFEGSSLETIRHMVASGVGITVLPRTSVQEVRAHASGVDNGLLSYVPFTEPQP
DRRVVLAWRKSFTRMPAIDAICDAIRACALPGTRKLELPAAVN"
misc_feature 400972..401847
/locus_tag="RBRH_01664"
/note="Transcriptional regulator [Transcription]; Region:
LysR; COG0583"
/db_xref="CDD:30928"
misc_feature 400978..401157
/locus_tag="RBRH_01664"
/note="Bacterial regulatory helix-turn-helix protein, lysR
family; Region: HTH_1; pfam00126"
/db_xref="CDD:201021"
misc_feature 401242..401847
/locus_tag="RBRH_01664"
/note="The C-terminal substrate-binding domain of the
LysR-type transcriptional regulator OxyR, a member of the
type 2 periplasmic binding fold protein superfamily;
Region: PBP2_OxyR; cd08411"
/db_xref="CDD:176103"
misc_feature order(401278..401280,401287..401292,401299..401301,
401311..401313,401335..401349,401644..401646,
401653..401658,401665..401667,401674..401679,
401683..401688)
/locus_tag="RBRH_01664"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:176103"
gene 402073..402972
/locus_tag="RBRH_01663"
/db_xref="GeneID:9986315"
CDS 402073..402972
/locus_tag="RBRH_01663"
/EC_number="2.5.1.-"
/codon_start=1
/transl_table=11
/product="4-hydroxybenzoate polyprenyltransferase"
/protein_id="YP_004028092.1"
/db_xref="GI:312795170"
/db_xref="GeneID:9986315"
/translation="MTFRSECCMMSALTLRLPLYFRLLRLHKPIGSVLLLWPTLNALW
IAADGHPPAHIVAIFAIGTVLMRSAGCAINDYADRDFDKHVKRTQDRPLTSGQIAPWK
ALAVAAALALVSFLLILPLNALTKWLSVAALFVAGTYPFMKRFFAIPQAYLGIAFGFG
IPMGFAAIQDQVPPLAWLMLLANVFWSVAYDTAYAMVDRDDDIKIGIRTSALTFGRFD
VLAVMLCYAAMLGIYAWIGYALHGSVAYWAGWAGALGCAVYHYTLIRDRDRMRCFAAF
MHNNWLGGILFAGIAVHYASMGL"
misc_feature 402151..402954
/locus_tag="RBRH_01663"
/note="4-hydroxybenzoate octaprenyltransferase; Reviewed;
Region: ubiA; PRK12848"
/db_xref="CDD:183790"
gene complement(402988..403800)
/locus_tag="RBRH_01662"
/db_xref="GeneID:9986314"
CDS complement(402988..403800)
/locus_tag="RBRH_01662"
/EC_number="1.5.1.2"
/codon_start=1
/transl_table=11
/product="Pyrroline-5-carboxylate reductase"
/protein_id="YP_004028093.1"
/db_xref="GI:312795171"
/db_xref="GeneID:9986314"
/translation="MKIAFIGAGNMAAALIGGLLKRGIPAADLYAIDPSADARARLTQ
QHPIRTGEAADASLGDYDAIVIAVKPQVMKAVVESLVPWLRAQLIISIAAGIRAADIA
HWLNGYQRVIRTMPNTPALIGSGVTGLAALHGVDDAGRALAERVLRAVGEVVWCDDES
KIDAVTAISGSGPAYVFYFIEALQRAARELGLDDEQARALALATFTGAAQLAAQSGEP
ASVLRERVTSKGGTTAAALESFEADGIGAAIVRGALAAHARAIQMGDAFGKQ"
misc_feature complement(403003..403800)
/locus_tag="RBRH_01662"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:213117"
misc_feature complement(403003..403800)
/locus_tag="RBRH_01662"
/note="pyrroline-5-carboxylate reductase; Reviewed;
Region: PRK11880"
/db_xref="CDD:183357"
gene complement(403812..404516)
/locus_tag="RBRH_01661"
/db_xref="GeneID:9986313"
CDS complement(403812..404516)
/locus_tag="RBRH_01661"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028094.1"
/db_xref="GI:312795172"
/db_xref="GeneID:9986313"
/translation="MSTLIAPHLDEVCRRIAAVAAAAGRDPASVQLLAVSKTFPADAI
RAAHAAGQQAFGENYVQEALDKIAALQPLRASLEWHFIGPLQSNKTRPVAEQFDWVHS
VDRLKIAHRLSEQRPTHLPPLNVCVQVNVSGEASKHGVAPDDVATLARDVAALPRLRL
RGLMSIPEPVSGLHAQRAPHRRLRELFDAVNAQGLGLDTLSMGMSADLDAAILEGATI
VRVGTAIFGPRTYPTH"
misc_feature complement(403833..404504)
/locus_tag="RBRH_01661"
/note="Pyridoxal 5-phosphate (PLP)-binding TIM barrel
domain of Type III PLP-Dependent Enzymes, Yggs-like
proteins; Region: PLPDE_III_Yggs_like; cd06824"
/db_xref="CDD:143497"
misc_feature complement(order(403848..403853,403857..403859,
403905..403907,404019..404021,404271..404273,
404343..404345,404406..404408,404412..404414))
/locus_tag="RBRH_01661"
/note="pyridoxal 5'-phosphate (PLP) binding site [chemical
binding]; other site"
/db_xref="CDD:143497"
misc_feature complement(404406..404408)
/locus_tag="RBRH_01661"
/note="catalytic residue [active]"
/db_xref="CDD:143497"
gene complement(404537..405763)
/locus_tag="RBRH_01660"
/db_xref="GeneID:9986312"
CDS complement(404537..405763)
/locus_tag="RBRH_01660"
/EC_number="1.1.3.15"
/codon_start=1
/transl_table=11
/product="(S)-2-hydroxy-acid oxidase subunit GlcF"
/protein_id="YP_004028095.1"
/db_xref="GI:312795173"
/db_xref="GeneID:9986312"
/translation="MQTHLADFIRHTLDGNEAHAILRQCVHCGLCTATCPTYQILGDE
LDGPRGRIYLIKQMLEGAPVTRSTQLHLDRCLTCRNCETTCPSGVQYGRLAHIGRKLV
EQKVPRRWRSRLVRRLLASFLPNATLFTPAMRLVQHVRPLLPKRLRAKVPLRQHPRAW
PTARHRIRMLMLTGCVQPGMMPNINVATARVLDALGIEPVVADDAGCCGAIRLHLGYH
AQTLDDARRNIDAWWPHIEQGAAAVVINASGCGATIKEYGHLLRDDPAYAHKAAHVAS
LAQDLAELLPRYEAELACRIRRRDVHTVAYHPPCTLQHGQKITGRVERLLQALGLEVR
VPSDAHLCCGSAGTYSVLQPALSYTLRNQKLERLSALEPQMIVSANVGCIAHLQSGTS
TPVAHWIELVDRLLSD"
misc_feature complement(404540..405763)
/locus_tag="RBRH_01660"
/note="glycolate oxidase iron-sulfur subunit; Provisional;
Region: glcF; PRK11274"
/db_xref="CDD:183069"
misc_feature complement(<405497..>405736)
/locus_tag="RBRH_01660"
/note="The HCP family of iron-sulfur proteins includes
hybrid cluster protein (HCP), acetyl-CoA synthase (ACS),
and carbon monoxide dehydrogenase (CODH), all of which
contain [Fe4-S4] metal clusters at their active sites.
These proteins have a conserved...; Region: HCP_like;
cl14655"
/db_xref="CDD:187409"
misc_feature complement(404999..405256)
/locus_tag="RBRH_01660"
/note="Cysteine-rich domain; Region: CCG; pfam02754"
/db_xref="CDD:202376"
misc_feature complement(404600..404854)
/locus_tag="RBRH_01660"
/note="Cysteine-rich domain; Region: CCG; pfam02754"
/db_xref="CDD:202376"
gene complement(405772..406863)
/locus_tag="RBRH_01659"
/db_xref="GeneID:9986311"
CDS complement(405772..406863)
/locus_tag="RBRH_01659"
/EC_number="1.1.3.15"
/codon_start=1
/transl_table=11
/product="(S)-2-hydroxy-acid oxidase subunit GlcE"
/protein_id="YP_004028096.1"
/db_xref="GI:312795174"
/db_xref="GeneID:9986311"
/translation="MTQMPHPYASLRSQVTQASERGVPLQIRGGGTKSWYGQNIEGEV
LDTREVSGIVAYDPAERVITAYCGTPLADIEAALAEHRQMLAFEPPHFGHGATIGGCI
AAGLAGPRRASAGAARDFVLGATVMNGRGDMLRLGGRVTKNVAGYDIARLMAGSLGTL
GLLLDVSLKVLPRPQAELTLKFDMNGTDAVRKLNEWAGRPLPLTASAWRNGTLALRLG
GADSALKSARNTLGGKVIDAVEAERFWTGLREQTDAFFRIIPADAALWRLSLPSITEP
LQLPGVQWMEWGGAQRWWVTDTDAQTVRMAVRQAGGHATLFRCGSRYNRNVGVFTALP
SPLMSIHRRLKAVFDPARIFNRGRLYPDL"
misc_feature complement(405775..406839)
/locus_tag="RBRH_01659"
/note="glycolate oxidase FAD binding subunit; Provisional;
Region: glcE; PRK11282"
/db_xref="CDD:183074"
misc_feature complement(406453..406821)
/locus_tag="RBRH_01659"
/note="FAD binding domain; Region: FAD_binding_4;
pfam01565"
/db_xref="CDD:201863"
gene complement(406868..408361)
/locus_tag="RBRH_01658"
/db_xref="GeneID:9986310"
CDS complement(406868..408361)
/locus_tag="RBRH_01658"
/EC_number="1.1.3.15"
/codon_start=1
/transl_table=11
/product="(S)-2-hydroxy-acid oxidase subunit D"
/protein_id="YP_004028097.1"
/db_xref="GI:312795175"
/db_xref="GeneID:9986310"
/translation="MNASVEPSPEAIAARQREVVQALTTVLPPHCLLYRDEDTAPYEC
DGLAAYRQLPLAVVLPETESQVRRVLQTCHRLDVPVVPRGAGTGLSGGAMPLRDGIVL
SLARLNKIINIDPYARTATLQPGVRNLAISEAAAPYGLYYAPDPSSQIACTIGGNVAE
NAGGVHCLKYGLTVHNVLRVRAITMEGDLVEFGSLGPDCAGLDLLAVLIGSEGMFAVV
TEVTVRLLPKPQVAQVIMASFDDVVKGGAAAAAIIAAGIVPAGLDMMDQLATHAVEEF
VQAGYDLEAQAILLCESDGTPDEVADEIERMTAVLHAHGATRIQISRSEAERLKFWSG
YKNAFAAAGRISPDYYCMDGTVPRRAIGPLLARIAEMEKQYGLRCMNVFHAGDGNMRS
LILFDGNDPDEWRRAEAFGAQMLETCVGLDGTITGEHGVGIEKTDAMCVQFCAEERDA
LLAVKRAFDPPGLLNPGKDIPTRARCAEYGKMRGHQGLLPHPELPRR"
misc_feature complement(406874..408307)
/locus_tag="RBRH_01658"
/note="glycolate oxidase subunit GlcD; Provisional;
Region: PRK11230"
/db_xref="CDD:183043"
misc_feature complement(407783..408202)
/locus_tag="RBRH_01658"
/note="FAD binding domain; Region: FAD_binding_4;
pfam01565"
/db_xref="CDD:201863"
gene complement(408383..409879)
/locus_tag="RBRH_01657"
/db_xref="GeneID:9986309"
CDS complement(408383..409879)
/locus_tag="RBRH_01657"
/EC_number="1.1.3.15"
/codon_start=1
/transl_table=11
/product="(S)-2-hydroxy-acid oxidase subunit D"
/protein_id="YP_004028098.1"
/db_xref="GI:312795176"
/db_xref="GeneID:9986309"
/translation="MGDAHWLKIVNQLTSLPAMRSGDHPVTHSIARAAVRKPFPPSLL
DALKDTFGERVSVAEAVRAHHGRDESMFDPQWPDAVVYARTAQEVATIVALCAQYEVP
VIPYGNGSSLEGHLLAVQGGVTIDLSEMNHVLSIDAHDLTATVQAGVSRKALNDALRG
TGLFFPIDPGADASIGGMAATRASGTNAVRYGTMCENVLGLTVVRADARIIHTGSRAR
KSSAGYDLTRLFVGSEGTLGVITDVTVRLYPLPEAISAAVCAFPSMGEAVRTVIETIQ
LGVPVARVEFVDALAIRAINRHSNLTLPEMQTLFFEFHGSETGVREQAQTVQDMAAQH
GGQGFEWATRPEERSRLWNARHSAYFAMLQLRPGCRALTTDVCVPISQLAECVEQTEA
DLKQSSLLCPIVGHVGDGNFHVAMLIDPASPAEIHEAEQLNQRIVSRALRFGGTCTGE
HGVGLHKMDFLVDEHGADAVDTMRAIKHALDPHNLMNPGKIFAFHGPH"
misc_feature complement(408401..409744)
/locus_tag="RBRH_01657"
/note="FAD/FMN-containing dehydrogenases [Energy
production and conversion]; Region: GlcD; COG0277"
/db_xref="CDD:30625"
misc_feature complement(409238..409651)
/locus_tag="RBRH_01657"
/note="FAD binding domain; Region: FAD_binding_4;
pfam01565"
/db_xref="CDD:201863"
gene 410014..410565
/locus_tag="RBRH_01656"
/db_xref="GeneID:9986308"
CDS 410014..410565
/locus_tag="RBRH_01656"
/codon_start=1
/transl_table=11
/product="cobalamin adenosyltransferase"
/protein_id="YP_004028099.1"
/db_xref="GI:312795177"
/db_xref="GeneID:9986308"
/translation="MMGNRLSKIVTRTGDDGTTGLGDASRVAKDDTRIAAIGDVDELN
SSLGVLLAETLPARVREVLVAVQHDLFDVGAQLCMPGEVMIVSEHVARLDGWLEHFNA
QLPPLREFVLPGGSRSAALSHLCRTVCRRAERTIVALGHEQAVDAALRQYVNRLSDLM
FVLARVLNDATGQPEVLWQHERA"
misc_feature 410086..410517
/locus_tag="RBRH_01656"
/note="Cobalamin adenosyltransferase; Region:
Cob_adeno_trans; pfam01923"
/db_xref="CDD:202048"
gene complement(410640..410750)
/locus_tag="RBRH_01655"
/db_xref="GeneID:9986307"
CDS complement(410640..410750)
/locus_tag="RBRH_01655"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028100.1"
/db_xref="GI:312795178"
/db_xref="GeneID:9986307"
/translation="MAIDQRRPLTGHGDRPATATHRSRQFIAMAIDGGGH"
gene complement(410841..411932)
/locus_tag="RBRH_01654"
/db_xref="GeneID:9986306"
CDS complement(410841..411932)
/locus_tag="RBRH_01654"
/EC_number="2.5.1.54"
/codon_start=1
/transl_table=11
/product="3-deoxy-7-phosphoheptulonate synthase"
/protein_id="YP_004028101.1"
/db_xref="GI:312795179"
/db_xref="GeneID:9986306"
/translation="MNRRTMMALHNTDDVRIRELKELLPPAHLLREFPCEERIADLIF
NARQSLHRILHGMDDRLIVVIGPCSIHDTRAALEYAQRLVEQRKRFAGELEIVMRVYF
EKPRTTVGWKGLINDPYLDNSFKINDGLRTARELLVQINALGLPAGTEYLDMISPQYI
ADLISWGAIGARTTESQVHRELASGLSCPVGFKNGTDGNVKIAVDAIKAASQPHHFLS
VTKGGHSAIVSTAGNEDCHVILRGGKTPNYDAASVEAACSAIGKLGLAARLMIDASHA
NSEKKHENQIPVCANIGRQVAAGDERIIGVMVESHLVAGRQDLKDGCELTYGQSVTDA
CIGWDDSVRVLEELAEAVRQRRIARDSGN"
misc_feature complement(410865..411917)
/locus_tag="RBRH_01654"
/note="phospho-2-dehydro-3-deoxyheptonate aldolase;
Validated; Region: PRK09261"
/db_xref="CDD:181734"
misc_feature complement(410895..411779)
/locus_tag="RBRH_01654"
/note="DAHP synthetase I family; Region: DAHP_synth_1;
pfam00793"
/db_xref="CDD:189723"
gene complement(412268..413788)
/locus_tag="RBRH_01653"
/db_xref="GeneID:9986305"
CDS complement(412268..413788)
/locus_tag="RBRH_01653"
/codon_start=1
/transl_table=11
/product="Microcin-processing peptidase 2 (TldD)"
/protein_id="YP_004028102.1"
/db_xref="GI:312795180"
/db_xref="GeneID:9986305"
/translation="MPSRRQLLSIYQSNGRARMNIIEPNIRHLAIAKDLLLTRYGLDE
AILVRTLGEIFSHRVDYADLYFQTTRSEAWSLEEGIVKSGSFSIDQGVGVRAVAGERT
AFAYSDDLSPQALAQAAQATRAIARAGGGKTRVRAAGALRGVAGRDLYLPADPLHSLD
ANAKVALLERVEKMARAKDPRITQVMAGLAGEYDVVLVARSDGALAADVRPLVRVSVT
VIAEQNGRREIGTGGGGGRYDYGYFTDEVMTRYVDDAVHAALVNLEARPAPAGTMTVV
LGPGWPGVLLHEAIGHGLEGDFNRKGSSAFAGRIGERVAANGVTVVDDGTLANRRGSL
NIDDEGNPTQCTTLIEDGILTGYMQDTLNARLMKMKITGNARRESYAALPMPRMTNTY
MLGGDKDPAEIIASVNHGLYAVNFGGGQVDITNGKFVFSASEAYMIENGKIAYPVKGA
TLVGSGPESLKYVSLIGNDMSLDTGVGVCGKEGQSVPVGVGQPTLRIDRMTVGGTV"
misc_feature complement(412274..413704)
/locus_tag="RBRH_01653"
/note="Predicted Zn-dependent proteases and their
inactivated homologs [General function prediction only];
Region: TldD; cl00398"
/db_xref="CDD:193802"
misc_feature complement(412718..413611)
/locus_tag="RBRH_01653"
/note="Putative modulator of DNA gyrase; Region:
PmbA_TldD; pfam01523"
/db_xref="CDD:190021"
gene complement(413865..414707)
/locus_tag="RBRH_01652"
/db_xref="GeneID:9986304"
CDS complement(413865..414707)
/locus_tag="RBRH_01652"
/codon_start=1
/transl_table=11
/product="carbon-nitrogen hydrolase"
/protein_id="YP_004028103.1"
/db_xref="GI:312795181"
/db_xref="GeneID:9986304"
/translation="MNDSVFRASGSASGTFALAALQMVSTPDVSRNLQAAGELIAEAA
AGGAQLVLLPEYFCFMGHHDADKLAVREAPGDGPIQQFLADAAARHRVWVIGGTLPLV
APEPGRVMNTTLVFDPQGRAVARYDKIHLFNFDKDDESFDEARTIRPGTDVVAFDAPF
GRVGLSVCYDLRFPELYRKLGDCALIVVPSAFTYTTGHAHWEMLLRARAVENQCYVLA
AAQGGTHENGRRTWGHSMLVDPWGQVVAVRADGAGVVSGTIDVQRITQVRQSLPAYRH
RVLA"
misc_feature complement(413877..414674)
/locus_tag="RBRH_01652"
/note="nitrilase; Region: PLN02798"
/db_xref="CDD:178395"
misc_feature complement(413877..414656)
/locus_tag="RBRH_01652"
/note="Nit1, Nit 2, and related proteins, and the
Nit1-like domain of NitFhit (class 10 nitrilases); Region:
nit; cd07572"
/db_xref="CDD:143596"
misc_feature complement(order(414135..414137,414192..414197,
414201..414206,414279..414281,414312..414314,
414324..414326,414375..414377,414543..414545))
/locus_tag="RBRH_01652"
/note="putative active site [active]"
/db_xref="CDD:143596"
misc_feature complement(order(414204..414206,414324..414326,
414543..414545))
/locus_tag="RBRH_01652"
/note="catalytic triad [active]"
/db_xref="CDD:143596"
misc_feature complement(order(413880..413885,413892..413897,
413985..413987,414075..414080,414084..414092,
414096..414101,414108..414113,414171..414176,
414180..414194,414201..414203,414255..414263,
414318..414323))
/locus_tag="RBRH_01652"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:143596"
gene complement(414704..419032)
/locus_tag="RBRH_01651"
/db_xref="GeneID:9986303"
CDS complement(414704..419032)
/locus_tag="RBRH_01651"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028104.1"
/db_xref="GI:312795182"
/db_xref="GeneID:9986303"
/translation="MPDRQETLDPNDARNAQAGSGWRRGPSEQVLRRVLACCASVAIA
LYFGAAATYVGLRYVIFPQLDSLRPHIEQRISDTLHAQVHIGRLTGRWSGLQPTLDID
QLTIMGPDGQRMLAVPTASATLSWRSLPRLAPVLSSLIVEQPEIFAERHPDGTYTIAG
VRVDPRQHGNSALLHWLMTQRAIVLRGGVLHWSDAQRGLPTLTLRGIHVAIDNRGLIH
RLGVQAQPDGRLLRGPLDLRARLRHSPLKPLTEPAGWTGTMFVSSGNLALPELARYTD
ARLDAQSGTLDVAAWLDFASGEWSGARGALSGSALRLRMDPTLPRLDVPSIGLDWSLR
RNDMRNLDYTLSLGNLRAELGGQVPLADGTPITRLLSIGEFNGRFRRATLGRGQLIRI
SGGTVDLGLLAQFVRTLPLPHPVLNELDRFDPRGTLANYAIQVERRAPRTREAASVAA
IEGGEPIVRYRVKAALEGVSVGAQEPPPGLTPGGHPHVGLPGAENIWGKIDADQNGGH
ATIDTTHGAVTIPGAFDNPRLTFNRFAAEATWTAHPLASDATRPAVAVNLSRFVVDND
DVRASATGTYSNPGHGRGKLDMEAMFDRLSLPRLARYLPTGVDEHTRAYLDHALTAGT
SHNATIAIHGELAEFPYTHDPHAGIFKIVAPFRDGGFDPTPHPPKRMSNGTPQVWPAF
DGIDGLFRMDQNVLRFDIQRARYQRVALTQLTGRIDDLGTLNSDLVINGVASGPLADM
LDYVNRSSLAVLSDHLGETVRAKGNATLALRLAIPRHPDKPHVGVNGSVTLADNAVSF
VPGKQLAALPPVTQIHGKVDFTEHTMTIGRASGQFLGGEIHTDGGIQQDGSSRFDVSG
HLLADAARTAVPPGPLATLLTRMSGGAPYSVAVRTRKNELPDISATSDLSGLALQLPA
PFTKPTGVPMPFSLRLRPATAGERPATGISRLDARLGPLNAIYLVRRGNDDKLAILRG
ALGVNREAVLPSEGVTAAAHVAHFDADAWRALLDAMSIPAEAISGEPAAAAAPSLLPA
PTYAAPSASSPDTASPFNLTGNVAALVPTRVGLHFDTLTLLNRRWENVVIGATHTPGA
WQANIASDDVSGHLAWHAKTPRSPYGQLDARLAKLVVPDSHDETLVSRVLEEPAQHVP
AIDLIVNELTVRGHNFGKLEVNARNIDENGVPVWQLDKLDVTNPAAKLSATASWRTPR
RARTSTSDNGTDDNPRRTALDFKLDIADGGALLDRLGLPRTLKGGNGTLSGKVGWRGG
PTRIDYPTLSGNLSLGLSHGQILKVEPGAAKLLGVLSLQALARVATLDLGTLFGEGLP
FDNVTATGTISHGIAKTEDFTLNSAAAKVTMQGNADLGCEQQDLLVTVVPSLSVGTAA
LATAVVNPLLGLGTFVAGLVLSDPISQSFARHYAVTGSWSHPQVEQVSDDRGKMGRPE
SHVSRQ"
misc_feature complement(414755..418903)
/locus_tag="RBRH_01651"
/note="TIGR02099 family protein; Region: TIGR02099"
/db_xref="CDD:162702"
misc_feature complement(414770..415549)
/locus_tag="RBRH_01651"
/note="AsmA-like C-terminal region; Region: AsmA_2;
pfam13502"
/db_xref="CDD:205680"
gene 419128..421998
/locus_tag="RBRH_01650"
/db_xref="GeneID:9986302"
CDS 419128..421998
/locus_tag="RBRH_01650"
/EC_number="2.7.7.42"
/codon_start=1
/transl_table=11
/product="glutamate-ammonia-ligase adenylyltransferase"
/protein_id="YP_004028105.1"
/db_xref="GI:312795183"
/db_xref="GeneID:9986302"
/translation="MCRTNDTMIDMPLPSSPLASDAAPLLSAAYSRYAARQYAARPEL
AARVRELARAPLTRHWIEQRLAQLGAPQSEPVGDDVLKRALRLVRTELFCAVMERDLA
GLADVPEVTGTMTDLAEVAIRRSLATISAELHALYGMPLNAQRQPQTLGVVGMGKLGG
RELNVSSDIDLIFVYEDDGETEGGSRAPISNQDFFTRVGRRLIGALAEHTADGYVFRV
DMRLRPNGDSGPLVCSIGMLEEYFYVQGREWERYAWIKARLVSDVDSDAGARLAAQLE
AQVRPFVYRRYLDFGVIAAIRALHVQIRQEAARRASSRRDKADDIKLGRGGIREIEFT
AQVFQLIRGGQDAGFRIRPTLAVLDHAASHGLIARGAVQRLAQAYHMLRCIEHRLQYV
NDAQTHAMPVDEGERAQLAASLGFADYPALLAVLECHREFVAQQFDQIFARKRGNAAA
AGAGDPALGKVGGTAWGEAATWIWSSALADEAADDELRVRLASLGFNDPPAILLRLHA
VWQSARYASLPERHRARFDTLVLRALEAAPTHCHERVDATLLRFLDLLEAVARRGSYL
ALLVEYPAALARVFAVLGESRWAAGYLIRHPQVLDELLDDEALASPFDWTEFKRMLLA
RLADADGAEHQMDLLRHAHQAEVFRILLLDLGGHLSVEHISDRLSELADAVLDVTLQT
VWPQLARRHCDVPRFSIIAYGKLGGKELGYASDLDLIFLYDDPDERAAEIYALFARRL
ITWLTMSTGAGTLFDVDLRLRPNGEAGLLVTSLTAFRRYQLREGDAANAAWVWEHQAL
SRARFCAGDAAIGAQFEAIRAQVLAQPRDARTLATEIAAMRQKVAQGHPNPTALFDLK
HDRGGMVDIEFIVQYWVLLHAGAHPALRRNTGNIALLREAARIGLMSETQAEQVGGAY
RAYRKLQHALRLDGMDKARVPPERVQAERDAVTRLWEQVFGA"
misc_feature 419296..421992
/locus_tag="RBRH_01650"
/note="bifunctional glutamine-synthetase
adenylyltransferase/deadenyltransferase; Reviewed; Region:
PRK11072"
/db_xref="CDD:182946"
misc_feature 419419..419973
/locus_tag="RBRH_01650"
/note="Nucleotidyltransferase (NT) domain of Escherichia
coli adenylyltransferase (GlnE), Escherichia coli uridylyl
transferase (GlnD), and similar proteins; Region:
NT_GlnE_GlnD_like; cd05401"
/db_xref="CDD:143391"
misc_feature order(419629..419631,419635..419637,419782..419784)
/locus_tag="RBRH_01650"
/note="metal binding triad; metal-binding site"
/db_xref="CDD:143391"
misc_feature 420088..420450
/locus_tag="RBRH_01650"
/note="GlnD PII-uridylyltransferase; Region:
GlnD_UR_UTase; pfam08335"
/db_xref="CDD:149407"
misc_feature 421057..421590
/locus_tag="RBRH_01650"
/note="Nucleotidyltransferase (NT) domain of Escherichia
coli adenylyltransferase (GlnE), Escherichia coli uridylyl
transferase (GlnD), and similar proteins; Region:
NT_GlnE_GlnD_like; cd05401"
/db_xref="CDD:143391"
misc_feature order(421270..421272,421276..421278,421396..421398)
/locus_tag="RBRH_01650"
/note="metal binding triad; metal-binding site"
/db_xref="CDD:143391"
misc_feature 421687..>421905
/locus_tag="RBRH_01650"
/note="GlnD PII-uridylyltransferase; Region:
GlnD_UR_UTase; pfam08335"
/db_xref="CDD:149407"
gene complement(422006..423778)
/locus_tag="RBRH_01649"
/db_xref="GeneID:9986301"
CDS complement(422006..423778)
/locus_tag="RBRH_01649"
/codon_start=1
/transl_table=11
/product="DNA repair protein recN"
/protein_id="YP_004028106.1"
/db_xref="GI:312795184"
/db_xref="GeneID:9986301"
/translation="MRTRRSARTSPAKPVPVAARRLNRCQPTQSAFYDDRFRSPMLRH
LSIRDFVIVASLDIEFERGFTVFSGETGAGKSILIDALALALGARADATVVRIGQSRA
DITAEFDAHESAARWLAEHAFDDGSGHVVLRRVLDANGRSRAFINGTAATLGQLRDIG
EMLVDIHGQHAHQLLMRGDAQRELFDAHAGLTALAADVARAWRGWRDAAAAVQAAQAR
EREVQFERERLVWQLSELEKLAPQPGEWDEISAEHRRLSHAANLIDGVQAALGALSES
DDAMITQLGTLIAKLRDLAEIDSALGDALAALEPAEIQLQEAAYSLTHYAQRLELDPA
GLAQVEARLDALHSTARKFRMQPDALPDELLARRAQLQALDATTDIDALHAAQARAKQ
AYMTLAERLSKARAKAAKALSSAVTTGMQDLSMAGGRFDVALEPLPEGGQHGLEQVEF
RVAGHAGVPLRPLAKVASGGELARISLALSVIASTASPTPTLIFDEVDSGIGGAVAEV
VGRLLHQLGQIRQVLCVTHLPQVAARGEHHFSVAKSTDAQGATLSEVTALDRASRVEE
VARMLGGVEITATTRKHAKEMLAA"
misc_feature complement(422009..423658)
/locus_tag="RBRH_01649"
/note="recombination and repair protein; Provisional;
Region: PRK10869"
/db_xref="CDD:182794"
misc_feature complement(<423218..423655)
/locus_tag="RBRH_01649"
/note="RecN ATPase involved in DNA repair; ABC
(ATP-binding cassette) transporter nucleotide-binding
domain; ABC transporters are a large family of proteins
involved in the transport of a wide variety of different
compounds including sugars, ions, peptides, and...;
Region: ABC_RecN; cd03241"
/db_xref="CDD:73000"
misc_feature complement(423551..423574)
/locus_tag="RBRH_01649"
/note="Walker A/P-loop; other site"
/db_xref="CDD:73000"
misc_feature complement(order(423245..423247,423548..423556,
423560..423565))
/locus_tag="RBRH_01649"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:73000"
misc_feature complement(423245..423256)
/locus_tag="RBRH_01649"
/note="Q-loop/lid; other site"
/db_xref="CDD:73000"
misc_feature complement(422060..>422449)
/locus_tag="RBRH_01649"
/note="RecN ATPase involved in DNA repair; ABC
(ATP-binding cassette) transporter nucleotide-binding
domain; ABC transporters are a large family of proteins
involved in the transport of a wide variety of different
compounds including sugars, ions, peptides, and...;
Region: ABC_RecN; cd03241"
/db_xref="CDD:73000"
misc_feature complement(422351..422380)
/locus_tag="RBRH_01649"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:73000"
misc_feature complement(422291..422308)
/locus_tag="RBRH_01649"
/note="Walker B; other site"
/db_xref="CDD:73000"
misc_feature complement(422273..422284)
/locus_tag="RBRH_01649"
/note="D-loop; other site"
/db_xref="CDD:73000"
misc_feature complement(422192..422212)
/locus_tag="RBRH_01649"
/note="H-loop/switch region; other site"
/db_xref="CDD:73000"
gene complement(423741..424736)
/locus_tag="RBRH_01648"
/db_xref="GeneID:9986300"
CDS complement(423741..424736)
/locus_tag="RBRH_01648"
/EC_number="2.7.1.23"
/codon_start=1
/transl_table=11
/product="ATP-NAD kinase"
/protein_id="YP_004028107.1"
/db_xref="GI:312795185"
/db_xref="GeneID:9986300"
/translation="MRAARIAIDPTRTGEPKHEGIQFVRYLWCNAGMEMGQFKTVALI
GRNNTPGIGEPLAALAGCLTQRGFQIVFEADTARENDLHAYPALTPAQIGARADVAVV
LGGDGTMLGIGRQLAPYHTPLIGVNHGRLGFITDIAIADMKQLVPQMLSGSHEREERS
LLEARIMRNGEPIYHAQALNDVVVNRSGFSGMAELRVSVDGHFMSDQRSDGLIVATPT
GSTAYALSSNGPLLHPQLQGIVLVPIAPHALSNRPIVLPDTCRIAIQIIGGRDVNVNF
DMQSFTALQLEDTIEVQRSKHTVPFLHPVGYSYYRTLRKKLHWNAHSSLGEDEPG"
misc_feature complement(423765..424628)
/locus_tag="RBRH_01648"
/note="NAD(+)/NADH kinase family protein; Provisional;
Region: ppnK; PRK02155"
/db_xref="CDD:179379"
misc_feature complement(423780..424550)
/locus_tag="RBRH_01648"
/note="inorganic polyphosphate/ATP-NAD kinase;
Provisional; Region: ppnK; PRK02231"
/db_xref="CDD:167337"
gene 424759..425778
/locus_tag="RBRH_01647"
/db_xref="GeneID:9986299"
CDS 424759..425778
/locus_tag="RBRH_01647"
/codon_start=1
/transl_table=11
/product="Heat-inducible transcription repressor hrcA"
/protein_id="YP_004028108.1"
/db_xref="GI:312795186"
/db_xref="GeneID:9986299"
/translation="MLDPRAQTLLKTLIERYIAEGQPVGSRTLSKYSGLELSPATIRN
VMSDLEELGLVASPHTSAGRIPTPRGYRLFVDTMLTVQPDAQEAEVKLAVQDKFKPGE
TQKVVAAAASVLSNLSQFAGVVLTPRRSHVFKQIEFMRLSDKRILLIIVTPEGDVQNR
IMATQRDYSPSQLTEASNYINTHYAGLSFDEVRRRLREEIDALRGDMMQLMQAAVTAS
TETDDESDNVLISGERNLLEVADLSSDMARLRKLFDVFDQKTSLLQLLDVSSHAQGVQ
IFIGGESTLVPIEEMSVVTAPYEVDGKIVGTLGVIGPTRMAYNRVIPIVDITARLLSF
ALSQH"
misc_feature 424759..425769
/locus_tag="RBRH_01647"
/note="heat-inducible transcription repressor;
Provisional; Region: hrcA; PRK00082"
/db_xref="CDD:178849"
misc_feature 424759..424974
/locus_tag="RBRH_01647"
/note="Helix-turn-helix domains; Region: HTH; cl00088"
/db_xref="CDD:213080"
gene complement(425769..425918)
/locus_tag="RBRH_04046"
/db_xref="GeneID:9986298"
CDS complement(425769..425918)
/locus_tag="RBRH_04046"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028109.1"
/db_xref="GI:312795187"
/db_xref="GeneID:9986298"
/translation="MSTAMVHLLSDYNGRSAFAAVARRLEAGHPDSGAARRIDSGGPA
GPRQC"
gene 425852..427003
/locus_tag="RBRH_01646"
/db_xref="GeneID:9988020"
CDS 425852..427003
/locus_tag="RBRH_01646"
/EC_number="4.99.1.1"
/codon_start=1
/transl_table=11
/product="ferrochelatase"
/protein_id="YP_004028110.1"
/db_xref="GI:312795188"
/db_xref="GeneID:9988020"
/translation="MPRRQMPSGRYNRITSAPLRCSTDPLMHFDLELPSQPSASHRVG
VLLINLGTPAAPTPRAVRRYLAEFLSDPRVVEIPAPLWQIVLRALILPLRGRASARKY
AAIWEAEGSPLRVHTERQVDGLRQWLAAGRCSVLVDYAMRYGTPSIGNVLNQLKRAGA
ERVLLVPLYPQYSASTSASAFDAAFCALARMRNQLEIRTIKHYADHPAYIEALASQVL
HYWQQHGRPDFTAGDRLLLSFHGVPKRTLDLGDPYAEQCRQTATLLAHALGLTEVECR
LTFQSRFGRAQWLQPYTAPTLQELGAAGAGRVDVFCPGFTSDCLETLEEIGIEGRDTF
LRAGGREFHRIPCVNDAQPWIRALAEIVVTHLQGWPIAASQQGAAATSA"
misc_feature 425966..426961
/locus_tag="RBRH_01646"
/note="ferrochelatase; Reviewed; Region: hemH; PRK00035"
/db_xref="CDD:178811"
misc_feature 425978..426469
/locus_tag="RBRH_01646"
/note="Ferrochelatase, N-terminal domain: Ferrochelatase
(protoheme ferrolyase or HemH) is the terminal enzyme of
the heme biosynthetic pathway. It catalyzes the insertion
of ferrous iron into the protoporphyrin IX ring yielding
protoheme. This enzyme is...; Region: Ferrochelatase_N;
cd03411"
/db_xref="CDD:48638"
misc_feature order(425996..425998,426152..426154,426164..426166,
426197..426199,426209..426211,426353..426355,
426362..426373,426455..426457,426461..426463)
/locus_tag="RBRH_01646"
/note="C-terminal domain interface [polypeptide binding];
other site"
/db_xref="CDD:48638"
misc_feature order(425999..426001,426041..426043,426053..426061,
426374..426379)
/locus_tag="RBRH_01646"
/note="active site"
/db_xref="CDD:48638"
misc_feature 426482..426898
/locus_tag="RBRH_01646"
/note="Ferrochelatase, C-terminal domain: Ferrochelatase
(protoheme ferrolyase or HemH) is the terminal enzyme of
the heme biosynthetic pathway. It catalyzes the insertion
of ferrous iron into the protoporphyrin IX ring yielding
protoheme. This enzyme is...; Region: Ferrochelatase_C;
cd00419"
/db_xref="CDD:73203"
misc_feature order(426569..426571,426584..426586,426713..426715,
426812..426814)
/locus_tag="RBRH_01646"
/note="active site"
/db_xref="CDD:73203"
misc_feature order(426602..426610,426617..426619,426629..426631,
426791..426793,426797..426805,426809..426811,
426821..426823,426896..426898)
/locus_tag="RBRH_01646"
/note="N-terminal domain interface [polypeptide binding];
other site"
/db_xref="CDD:73203"
gene 426963..427418
/locus_tag="RBRH_01645"
/db_xref="GeneID:9986297"
CDS 426963..427418
/locus_tag="RBRH_01645"
/codon_start=1
/transl_table=11
/product="Heat shock protein 15"
/protein_id="YP_004028111.1"
/db_xref="GI:312795189"
/db_xref="GeneID:9986297"
/translation="MLHRNRARRRHRREGPMKLKISTDPHARLRIDKWLWAARFFKTR
SLAADALGKGRVRIGGESVKAAKEVRVGDMVQIDIERIVWEVQVRGVCEVRGPAAIAQ
TLYEETPTGNARRLAELERRRTFREPAATLHGRPTKRDRRIMDKLSGAD"
misc_feature 427050..>427208
/locus_tag="RBRH_01645"
/note="S4/Hsp/ tRNA synthetase RNA-binding domain; The
domain surface is populated by conserved, charged residues
that define a likely RNA-binding site; Found in stress
proteins, ribosomal proteins and tRNA synthetases; This
may imply a hitherto unrecognized...; Region: S4; cd00165"
/db_xref="CDD:29105"
misc_feature order(427050..427052,427086..427091,427095..427100,
427104..427109,427116..427121,427125..427127,
427146..427151,427152..427166,427170..427172)
/locus_tag="RBRH_01645"
/note="RNA binding surface [nucleotide binding]; other
site"
/db_xref="CDD:29105"
gene 427906..428547
/locus_tag="RBRH_01644"
/db_xref="GeneID:9986296"
CDS 427906..428547
/locus_tag="RBRH_01644"
/codon_start=1
/transl_table=11
/product="GrpE protein HSP-70 cofactor"
/protein_id="YP_004028112.1"
/db_xref="GI:312795190"
/db_xref="GeneID:9986296"
/translation="MTTAIMEEKQASQHRPASDTEPAGNGTQTAQDAQVQPAEAQRKD
AAAAQPGADNGQLGEAHAAAEANALEQAQAKIAELQESFLRACAETENVRRRAQDDVA
KAHKFAIESFAEHLLPVVDSLEAALADNAGDLAKVREGVELTLRQLSSALEKGRVVQI
NPIGEKFDPHRHQAISMVPAEQEANTVVSVLQKGYVIADRVLRPALVTVAAPK"
misc_feature 428128..428535
/locus_tag="RBRH_01644"
/note="GrpE; Region: GrpE; pfam01025"
/db_xref="CDD:201556"
misc_feature 428131..428532
/locus_tag="RBRH_01644"
/note="GrpE is the adenine nucleotide exchange factor of
DnaK (Hsp70)-type ATPases. The GrpE dimer binds to the
ATPase domain of Hsp70 catalyzing the dissociation of ADP,
which enables rebinding of ATP, one step in the Hsp70
reaction cycle in protein folding; Region: GrpE; cd00446"
/db_xref="CDD:73207"
misc_feature order(428137..428142,428149..428154,428161..428163,
428173..428175,428182..428187,428227..428229,
428239..428241,428248..428250,428269..428271,
428281..428283,428326..428328,428335..428337,
428368..428370)
/locus_tag="RBRH_01644"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:73207"
misc_feature order(428188..428190,428410..428412,428419..428433,
428476..428478,428503..428505,428515..428517)
/locus_tag="RBRH_01644"
/note="hsp70 (ATPase domain) interactions [polypeptide
binding]; other site"
/db_xref="CDD:73207"
gene 428695..430632
/locus_tag="RBRH_01643"
/db_xref="GeneID:9986295"
CDS 428695..430632
/locus_tag="RBRH_01643"
/codon_start=1
/transl_table=11
/product="chaperone protein dnaK"
/protein_id="YP_004028113.1"
/db_xref="GI:312795191"
/db_xref="GeneID:9986295"
/translation="MGKIIGIDLGTTNSCVALMEGNQVRVIENSEGARTTPSIIAYMD
DGEILVGAPAKRQSVTNPKNTLFAVKRLIGRRFEEKEVQKDIGLMPYQIIKADNGDAW
VQVRDKKLAPPQISAEVLRKMKKTAEDYLGEPVTEAVITVPAYFNDSQRQATKDAGRI
AGLDVKRIINEPTAAALAFGLDKSGKGDRKIAVYDLGGGTFDISIIEIADVDGEMQFE
VLSTNGDTFLGGEDFDQRIIDYIIGEFKKEQGVDLSKDVLALQRLKEAAEKAKIELSS
SAQTEINLPYITADASGPKHLNLKVTRAKLEALVEELIERTIEPCRIAIKDAGVKVGD
IDDVILVGGMTRMPKVQDKVKEFFGKEPRRDVNPDEAVAVGAAIQGQVLSGDRKDVLL
LDVTPLSLGIETLGGVMTKMINKNTTIPTKHTQVYSTADDNQSAVTIKVFQGEREMAV
GNKLLGEFNLEGIPPAPRGVPQIEVTFDIDANGILHVHARDKGTGKENKITIKANSGL
SEAEIEKMVKDAEANAEEDHRLRELADVRNQGDALVHSTKKALSDYGDKIDASEKSAI
EAALKELEEALKSASDKAQVEAKIEALSKVSQKLGEKMYADMQAQAGAAGAAPDAQSA
APSGKAEDDVVDADFKEVKKD"
misc_feature 428695..430629
/locus_tag="RBRH_01643"
/note="molecular chaperone DnaK; Provisional; Region:
dnaK; PRK00290"
/db_xref="CDD:178963"
misc_feature 428695..429804
/locus_tag="RBRH_01643"
/note="Nucleotide-Binding Domain of the sugar
kinase/HSP70/actin superfamily; Region:
NBD_sugar-kinase_HSP70_actin; cl17037"
/db_xref="CDD:213144"
misc_feature order(428716..428727,428731..428733,428737..428739,
429205..429207,429277..429288,429718..429720)
/locus_tag="RBRH_01643"
/note="nucleotide binding site [chemical binding]; other
site"
/db_xref="CDD:212657"
gene 430796..431923
/locus_tag="RBRH_01642"
/db_xref="GeneID:9986294"
CDS 430796..431923
/locus_tag="RBRH_01642"
/codon_start=1
/transl_table=11
/product="chaperone protein dnaJ"
/protein_id="YP_004028114.1"
/db_xref="GI:312795192"
/db_xref="GeneID:9986294"
/translation="MAKRDYYDVLGVAKNASDDDIKKAYRKLAMKYHPDRNPGNKDAE
EHFKEAKEAYEMLSDSQKRAAYDQYGHAGVDPNMGAAGAQGFGGFADAFGDIFGDIFG
QAAGGGRRAGPQVYRGADLRYSMEITLEQAAHGYETQIRVPSWASCQVCRGSGAKPGT
KPETCPTCHGQGQVRMSQGFFSIQQACPKCHGTGTYVPEPCAHCHGVGKVKENKTLEV
KIPAGIDEGMRIRSAGNGEPGINGGPNGDLYVEIHIKPHTVFERDGDDLHCQMPIAFT
TAALGGEIEVPTLAGKASFTVPEGTQSGKTFRLRGKGLKGLRSSLPGDLYVHVQVETP
VKLTDTQRDLLRQFEKSLVEGGGRHSPQSKGWFDRVKSFFE"
misc_feature 430796..431920
/locus_tag="RBRH_01642"
/note="chaperone protein DnaJ; Provisional; Region:
PRK10767"
/db_xref="CDD:182712"
misc_feature 430808..430972
/locus_tag="RBRH_01642"
/note="DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock
protein 40) proteins are highly conserved and play crucial
roles in protein translation, folding, unfolding,
translocation, and degradation. They act primarily by
stimulating the ATPase activity of Hsp70s; Region: DnaJ;
cd06257"
/db_xref="CDD:99751"
misc_feature order(430892..430900,430925..430927,430934..430939,
430946..430951)
/locus_tag="RBRH_01642"
/note="HSP70 interaction site [polypeptide binding]; other
site"
/db_xref="CDD:99751"
misc_feature 431150..>431224
/locus_tag="RBRH_01642"
/note="C-terminal substrate binding domain of DnaJ and
HSP40; Region: DnaJ_C; cl03262"
/db_xref="CDD:207897"
misc_feature order(431162..431164,431207..431224)
/locus_tag="RBRH_01642"
/note="substrate binding site [polypeptide binding]; other
site"
/db_xref="CDD:199909"
misc_feature 431237..431419
/locus_tag="RBRH_01642"
/note="Zinc finger domain of DnaJ and HSP40; Region:
DnaJ_zf; cd10719"
/db_xref="CDD:199908"
misc_feature order(431237..431239,431246..431248,431288..431290,
431297..431299,431354..431356,431363..431365,
431396..431398,431405..431407)
/locus_tag="RBRH_01642"
/note="Zn binding sites [ion binding]; other site"
/db_xref="CDD:199908"
misc_feature 431423..431806
/locus_tag="RBRH_01642"
/note="C-terminal substrate binding domain of DnaJ and
HSP40; Region: DnaJ_C; cd10747"
/db_xref="CDD:199909"
misc_feature order(431618..431623,431630..431635,431693..431704,
431792..431806)
/locus_tag="RBRH_01642"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:199909"
gene 431925..433838
/locus_tag="RBRH_01641"
/db_xref="GeneID:9986293"
CDS 431925..433838
/locus_tag="RBRH_01641"
/EC_number="2.6.1.85"
/EC_number="4.1.3.38"
/codon_start=1
/transl_table=11
/product="Para-aminobenzoate synthetase component I /
4-amino-4-deoxychorismate lyase"
/protein_id="YP_004028115.1"
/db_xref="GI:312795193"
/db_xref="GeneID:9986293"
/translation="MMAADAGAGRAAGNPDSTRVFALLDDCVPGEALADAPACRSRLY
TAFSHERTCTDPGRLDAVLAEVDADLRTGLHALLLADYEWGVRLQCPAKQSGGGALRI
LLFRELRRLSSEQVAAWLQQQDGGRADPGVAGIANVRSSVTRDAFDDAITRIHAALRD
GDSYQVNYTYRLAFEMFGSAPALYRRLRARQPVPFGALLALPDGTHVLSLSPELFVEH
RGGTIVARPMKGTASRANDKQLDARQARALAADEKNRAENLMIVDLLRNDLGKIARTG
SVRVPALFALEPYASVWQMTSTVHARVRDEIGFADVLRALFPCGSITGAPKVRTMALI
ESIETTPRGLYTGAIGWLDPAADARPLGDFCLSVAIRTLVLEPRSTSGMGANVQAGTL
GVGAGIVLDSVAHDEYLECALKARFLTEADPGFQLFETMYATREGVRHEALHVARVER
SARYFGFPFEAGVFAARLAKACAALAPGGAYRMRATLRKDGVIDVSAAPLLPLAPGPV
RVMLAADHGMAAPYPDDPLLRHKTTCRDAYDRAWRLAETHHAFDLLFFNRRGELTEGG
RSTVFVRIDGRWVTPPLASGVLPGVMRSVLLADPAWQAIEQPITRADFERRDALVVCN
ALRGVMPAQLLRF"
misc_feature 432261..433178
/locus_tag="RBRH_01641"
/note="chorismate binding enzyme; Region: Chorismate_bind;
cl10555"
/db_xref="CDD:209166"
misc_feature 433188..433826
/locus_tag="RBRH_01641"
/note="PyridoxaL 5'-Phosphate Dependent Enzymes class IV
(PLPDE_IV). This D-amino acid superfamily, one of five
classes of PLPDE, consists of branched-chain amino acid
aminotransferases (BCAT), D-amino acid transferases
(DAAT), and 4-amino-4-deoxychorismate...; Region:
PLPDE_IV; cl00224"
/db_xref="CDD:206913"
misc_feature order(433194..433196,433200..433202,433206..433208,
433284..433286,433368..433370,433374..433376,
433521..433523,433533..433535,433539..433541,
433551..433553,433593..433595)
/locus_tag="RBRH_01641"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:29567"
misc_feature order(433206..433208,433263..433265,433515..433517,
433614..433616,433695..433700,433797..433799)
/locus_tag="RBRH_01641"
/note="substrate-cofactor binding pocket; other site"
/db_xref="CDD:29567"
misc_feature order(433263..433265,433515..433517,433614..433616)
/locus_tag="RBRH_01641"
/note="pyridoxal 5'-phosphate binding site [chemical
binding]; other site"
/db_xref="CDD:29567"
misc_feature 433515..433517
/locus_tag="RBRH_01641"
/note="catalytic residue [active]"
/db_xref="CDD:29567"
gene complement(433870..434688)
/locus_tag="RBRH_01640"
/db_xref="GeneID:9986292"
CDS complement(433870..434688)
/locus_tag="RBRH_01640"
/EC_number="2.1.2.11"
/codon_start=1
/transl_table=11
/product="3-methyl-2-oxobutanoate
hydroxymethyltransferase"
/protein_id="YP_004028116.1"
/db_xref="GI:312795194"
/db_xref="GeneID:9986292"
/translation="MSYLQNSGRRAVTVPRLQQMREAGEPIAMLTCYDASFAALLERA
GVDVLLIGDSLGNVLQGQTTTLPVSVADIAYHTASVARGSRGNALVVSDLPFGSYGTL
ADAYSSAVKLMQAGAQMVKLEGGAWLAETIRFLVERSVPVCAHLGLTPQSVHAFGGFK
VQGKSDLAAEQLKKDAQLLEQAGAQMVVLEAIPAALGAQVTAALTIPTIGIGAGVDCS
GQVLVLHDMLGVFPGKRPRFVKDFMAGQPSIEAAVQAYVRAVKDRTFPTAEHTF"
misc_feature complement(433891..434649)
/locus_tag="RBRH_01640"
/note="Ketopantoate hydroxymethyltransferase (KPHMT) is
the first enzyme in the pantothenate biosynthesis pathway.
Ketopantoate hydroxymethyltransferase (KPHMT) catalyzes
the first committed step in the biosynthesis of
pantothenate (vitamin B5), which is a...; Region:
KPHMT-like; cd06557"
/db_xref="CDD:119342"
misc_feature complement(order(433939..433953,433960..433962,
434002..434007,434014..434016,434134..434136,
434218..434229,434233..434238,434266..434283,
434335..434337,434347..434352,434359..434361,
434371..434373,434398..434403,434443..434445,
434452..434454,434461..434466,434473..434475,
434488..434493,434503..434520,434524..434526,
434569..434571,434578..434589,434644..434649))
/locus_tag="RBRH_01640"
/note="oligomerization interface [polypeptide binding];
other site"
/db_xref="CDD:119342"
misc_feature complement(order(434020..434022,434026..434028,
434119..434121,434239..434241,434254..434256,
434326..434328,434410..434412,434527..434535,
434539..434541,434596..434598))
/locus_tag="RBRH_01640"
/note="active site"
/db_xref="CDD:119342"
misc_feature complement(order(434326..434328,434410..434412,
434530..434532))
/locus_tag="RBRH_01640"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:119342"
gene complement(434711..435460)
/locus_tag="RBRH_01639"
/db_xref="GeneID:9986291"
CDS complement(434711..435460)
/locus_tag="RBRH_01639"
/EC_number="2.7.1.113"
/codon_start=1
/transl_table=11
/product="Deoxyguanosine kinase"
/protein_id="YP_004028117.1"
/db_xref="GI:312795195"
/db_xref="GeneID:9986291"
/translation="MSVPTRRRCDRGRPVGAAPMNPSAVVPPLTVHAPAQHTPLGYLV
IEGPIGVGKTTLATQLATRWSMQTLLERAADNPFLERFYHDNARYALPAQLDFLLQRE
TQMRAIADARQRGTPLAADFLPQKDELFARLTLPDDEFTLYRALAARVPLARPAPDLV
IYLQASPETLFARIQKRAIAMETHITDAYLRALCDAYSEFFYHYDDAPLLSVNTDHLD
LAGSDADLDLLVKHIGSMRGRKAVWVKGTAR"
misc_feature complement(434819..435337)
/locus_tag="RBRH_01639"
/note="Deoxyribonucleoside kinase (dNK) catalyzes the
phosphorylation of deoxyribonucleosides to yield
corresponding monophosphates (dNMPs). This family consists
of various deoxynucleoside kinases including deoxyribo-
cytidine (EC 2.7.1.74), guanosine (EC 2.7.1; Region: dNK;
cd01673"
/db_xref="CDD:30191"
misc_feature complement(order(434915..434917,434930..434932,
435068..435070,435179..435184,435212..435214,
435299..435304,435308..435310))
/locus_tag="RBRH_01639"
/note="Substrate-binding site [chemical binding]; other
site"
/db_xref="CDD:30191"
misc_feature complement(435158..435160)
/locus_tag="RBRH_01639"
/note="Substrate specificity [chemical binding]; other
site"
/db_xref="CDD:30191"
gene complement(435400..436047)
/locus_tag="RBRH_01638"
/db_xref="GeneID:9986290"
CDS complement(435400..436047)
/locus_tag="RBRH_01638"
/EC_number="2.7.6.3"
/codon_start=1
/transl_table=11
/product="2-amino-4-hydroxy-6-
hydroxymethyldihydropteridine pyrophosphokinase"
/protein_id="YP_004028118.1"
/db_xref="GI:312795196"
/db_xref="GeneID:9986290"
/translation="MPSRPRRRPMANHVATATPSGLRARRPSNAAGVDVMTVAYLGLG
ANLGDARQTLKDAVVCLAQQAPVTVLAKSSLYRTAPVDAGGDDFYNCVVKIDTTLAAR
QLLALCHGIEHHFGRERPYRNAPRTLDIDILLYGTVQLDEHDLTVPHPRLSERAFALV
PLLELDAAIEIPALGRADRYLTGVVSQRIEKVDPCQCPFRRVAAAIVGGQSGPRR"
misc_feature complement(435553..435933)
/locus_tag="RBRH_01638"
/note="7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase
(HPPK). Folate derivatives are essential cofactors in the
biosynthesis of purines, pyrimidines, and amino acids as
well as formyl-tRNA. Mammalian cells are able to utilize
pre-formed folates after...; Region: HPPK; cd00483"
/db_xref="CDD:29601"
misc_feature complement(order(435577..435579,435583..435585,
435598..435603,435610..435612,435652..435657,
435661..435663,435670..435672,435679..435681,
435691..435693,435697..435699,435712..435714,
435721..435723,435733..435735,435778..435780,
435784..435786,435805..435807,435811..435816,
435916..435918))
/locus_tag="RBRH_01638"
/note="catalytic center binding site [active]"
/db_xref="CDD:29601"
misc_feature complement(order(435583..435585,435598..435603,
435610..435612,435652..435657,435670..435672,
435691..435693,435697..435699,435712..435714,
435721..435723,435733..435735))
/locus_tag="RBRH_01638"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:29601"
gene complement(435989..437707)
/locus_tag="RBRH_01637"
/db_xref="GeneID:9986289"
CDS complement(435989..437707)
/locus_tag="RBRH_01637"
/EC_number="2.7.7.19"
/codon_start=1
/transl_table=11
/product="Poly(A) polymerase /
tRNA-nucleotidyltransferase"
/protein_id="YP_004028119.1"
/db_xref="GI:312795197"
/db_xref="GeneID:9986289"
/translation="MITKFIRKLFGSRSGDATPPADTAHDTDADRGGAHANPGIAPTG
RRRNAARDEPRSAPADARAAQDTRLASPKPARHTPRRRPLAAGGHAGSQPAAGGEAEV
PVIVPADIHRIDPALISRHAIRVTDTLQQAGFRAFIVGGAVRDLLLNIAPKDFDVATD
ATPDEVVKLFRRARLIGRRFQIVHVQFGQEIIEVSTFRALMDAVPADVGSADSAPAAP
PRKLRRGELDRRTHAVDASGRVLRDNVWGEQHEDATRRDFTVNAMYYDPATQTVLDYH
RGMDDIRARVLRMIGEPATRFREDPVRMLRVVRFAAKLGFTIESSTHAPIAKLADLIN
NVPAARLFDEMLKLLLSGHALGCLKQLRALGLHHGLLPLLDVVLEQPSGERFITLALT
HTDERVRLGKPVSPGFLFASLLWHEMQLRWQQYEAGGEHSIPALHRAMDDVLDQQTEK
LAIQKRYTADMREIWGLQPRLEKRSGRSALKLLEHQRFRAGYDFLLLRCEAGELDASV
GQWWTDFIAGDPDTREALLAQGDKERSPRKRRRRGGSRHRKDPGEGAQQAASPTDGEP
RGNGDA"
misc_feature complement(436112..437395)
/locus_tag="RBRH_01637"
/note="poly(A) polymerase; Region: pcnB; TIGR01942"
/db_xref="CDD:130997"
misc_feature complement(436856..437344)
/locus_tag="RBRH_01637"
/note="Nucleotidyltransferase (NT) domain of ClassII
CCA-adding enzymes; Region: NT_ClassII-CCAase; cd05398"
/db_xref="CDD:143388"
misc_feature complement(order(436925..436927,436934..436945,
437114..437116,437129..437131,437168..437170,
437240..437242,437246..437248,437273..437278,
437285..437290))
/locus_tag="RBRH_01637"
/note="active site"
/db_xref="CDD:143388"
misc_feature complement(order(436925..436927,436937..436945,
437240..437242,437246..437248,437276..437278,
437285..437290))
/locus_tag="RBRH_01637"
/note="NTP binding site [chemical binding]; other site"
/db_xref="CDD:143388"
misc_feature complement(order(437129..437131,437240..437242,
437246..437248))
/locus_tag="RBRH_01637"
/note="metal binding triad [ion binding]; metal-binding
site"
/db_xref="CDD:143388"
misc_feature complement(<436622..436765)
/locus_tag="RBRH_01637"
/note="Probable RNA and SrmB- binding site of polymerase
A; Region: PolyA_pol_RNAbd; pfam12627"
/db_xref="CDD:204988"
misc_feature complement(436109..436432)
/locus_tag="RBRH_01637"
/note="Polymerase A arginine-rich C-terminus; Region:
PolyA_pol_arg_C; pfam12626"
/db_xref="CDD:204987"
gene complement(437704..438441)
/locus_tag="RBRH_01636"
/db_xref="GeneID:9986288"
CDS complement(437704..438441)
/locus_tag="RBRH_01636"
/EC_number="3.1.3.3"
/codon_start=1
/transl_table=11
/product="phosphoserine phosphatase"
/protein_id="YP_004028120.1"
/db_xref="GI:312795198"
/db_xref="GeneID:9986288"
/translation="MRCWRTASSKMRSMTKTARNLALFDLDHTLIPTDSDHEWGRFMV
KLGIVDADSFSRENDRFYADYQAGKLDIHAYLHAMLTPLAKYSRRQLDDWHELFMHEV
INPRILPAARALVREHQEAGDLCCIVTATNAFITAPIAQAFGIETLIACEVETADGHP
DSPYTGNPMGVPSYREGKIVRVQAWLDSLGCDWTSFANSYFYSDSHNDIPLLEKVTVP
VATNPDEKLRDYALARGWRILELFQST"
misc_feature complement(437728..438387)
/locus_tag="RBRH_01636"
/note="Phosphoserine phosphatase [Amino acid transport and
metabolism]; Region: SerB; COG0560"
/db_xref="CDD:30906"
misc_feature complement(437761..438381)
/locus_tag="RBRH_01636"
/note="Haloacid Dehalogenase-like Hydrolases; Region:
HAD_like; cl11391"
/db_xref="CDD:212620"
misc_feature complement(438055..438057)
/locus_tag="RBRH_01636"
/note="motif II; other site"
/db_xref="CDD:119389"
gene complement(438413..439237)
/locus_tag="RBRH_01635"
/db_xref="GeneID:9986287"
CDS complement(438413..439237)
/locus_tag="RBRH_01635"
/codon_start=1
/transl_table=11
/product="DnaA-related protein"
/protein_id="YP_004028121.1"
/db_xref="GI:312795199"
/db_xref="GeneID:9986287"
/translation="MARAREARGKVGKIAILPDASVPTARSRQNRIPGPLSPVLTSSA
FHRQLTLDLGTPPPKTFENFFAGAHAELVARLAGLDAALAAGPVADRTFYVWGDAGSG
RSHLLQALVAGASSGRARFVAPLSPLSAFGYDPRVAIYAVDDVDQLADAQQIALFNLF
NEVRASPGSALVATGNAAPLHLAVREDLRTRLGWGLVFHLGALTDEGKAAVLKHAARE
RGLTLADDVPAWLLTHYHRDMPSLMRVLDELDRFALEHKRAVTLPLLRAMLADSFK"
misc_feature complement(438422..439099)
/locus_tag="RBRH_01635"
/note="DnaA regulatory inactivator Hda; Validated; Region:
PRK08903"
/db_xref="CDD:181578"
misc_feature complement(438428..439096)
/locus_tag="RBRH_01635"
/note="DnaA regulatory inactivator Hda; Region:
DnaA_homol_Hda; TIGR03420"
/db_xref="CDD:163254"
gene 439236..440297
/locus_tag="RBRH_01634"
/db_xref="GeneID:9986286"
CDS 439236..440297
/locus_tag="RBRH_01634"
/EC_number="6.3.3.1"
/codon_start=1
/transl_table=11
/product="phosphoribosylformylglycinamidine cyclo-ligase"
/protein_id="YP_004028122.1"
/db_xref="GI:312795200"
/db_xref="GeneID:9986286"
/translation="MNQPKSTPGTQAPGLSYRDAGVDIDAGDALIDRIKPLAKKTMRD
GVLAGIGGFGALFEVPKKYREPVLVSGTDGVGTKLKLAFHLNRHDTVGQDLVAMSVND
ILVQGAEPLFFLDYFACGKLDVETAASVVKGIAAGCELAGCALIGGETAEMPGMYPDG
EYDLAGFAVGAVEKSQIIDGSTIGAGDVVLGLASSGIHSNGYSLVRKIIERAAPDLQA
DFDGRSLADALMAPTRIYVKPMLELMRQLPVKGIAHITGGGLVENVPRVLPERLCAEL
DHRAWPLPPLFAWLQQHGGVADAEMHRVFNCGIGMVVIVAAEHAQMAAGVLSAAGEQV
WTLGTVRERNAGDAQTIVV"
misc_feature 439278..440255
/locus_tag="RBRH_01634"
/note="phosphoribosylaminoimidazole synthetase;
Provisional; Region: PRK05385"
/db_xref="CDD:180049"
misc_feature 439377..440255
/locus_tag="RBRH_01634"
/note="PurM (Aminoimidazole Ribonucleotide [AIR]
synthetase), one of eleven enzymes required for purine
biosynthesis, catalyzes the conversion of
formylglycinamide ribonucleotide (FGAM) and ATP to AIR,
ADP, and Pi, the fifth step in de novo purine
biosynthesis; Region: PurM; cd02196"
/db_xref="CDD:100032"
misc_feature order(439392..439406,439434..439445,439449..439451,
439455..439457,439473..439475,439539..439541,
439551..439553,439569..439571,439578..439580,
439587..439589,439680..439682,439692..439694,
439698..439700,439719..439724,439734..439736,
440031..440033)
/locus_tag="RBRH_01634"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:100032"
misc_feature order(439539..439541,439674..439682)
/locus_tag="RBRH_01634"
/note="putative ATP binding site [chemical binding]; other
site"
/db_xref="CDD:100032"
gene complement(440428..441534)
/locus_tag="RBRH_01633"
/db_xref="GeneID:9986285"
CDS complement(440428..441534)
/locus_tag="RBRH_01633"
/EC_number="2.5.1.75"
/codon_start=1
/transl_table=11
/product="tRNA delta(2)-isopentenylpyrophosphate
transferase"
/protein_id="YP_004028123.1"
/db_xref="GI:312795201"
/db_xref="GeneID:9986285"
/translation="MVVRPGSSLRSTSWTGCSCGANSRAVPPAPVIACLLGPTASGKT
AAALELARRAPVEIVSVDSALVYRQMDIGTAKPSATERAAVPHHLIDILDPLDAYSAA
QFRTDALRLCAQIIARGKLPLLVGGTMLYYKALVDGLNALPSADASIRAALEQDAARE
GWPALHAKLAQIDPVSAARIAPNDSQRIQRALEVWRLTGQPMSTLLRPTLNPAAGASV
GHQAAGDVDACAKDVDVCAMRADLPPSPRFAAVSLEPSDRSVLHARIAQRFDAMLDAG
LIDEVQQLRARGDLHPGLPSMRCVGYRQVWAYLDGEYDYATMRDKGIFATRQLCKRQL
TWLRSMPERIVIDCVGTDAGLRAADAVRRLWAPT"
misc_feature complement(440449..441456)
/locus_tag="RBRH_01633"
/note="tRNA delta(2)-isopentenylpyrophosphate transferase;
Reviewed; Region: miaA; PRK00091"
/db_xref="CDD:178856"
misc_feature complement(440515..441432)
/locus_tag="RBRH_01633"
/note="tRNA dimethylallyltransferase; Region: miaA;
TIGR00174"
/db_xref="CDD:200000"
gene complement(441467..444001)
/locus_tag="RBRH_01632"
/db_xref="GeneID:9986284"
CDS complement(441467..444001)
/locus_tag="RBRH_01632"
/codon_start=1
/transl_table=11
/product="DNA mismatch repair protein mutL"
/protein_id="YP_004028124.1"
/db_xref="GI:312795202"
/db_xref="GeneID:9986284"
/translation="MKPSGRQRTQPRHDRAAAPRYNRWMSQSIEPSMSDAARPPVDGE
SPPATPSPSVVDPAPVVDPASAVDPASAVDPASVADPAPAADPASAADPTPVADSASA
VDSAPVADSASAADPAPVADPASTDGPAVQRRDMPTRAIQPLPDQLISQIAAGEVVER
PASVVKELVENALDAGATALRITLDAGGVKRIMIADDGCGIEADELPLALMRHATSKI
RSLAELESVCTLGFRGEALASIAAVAQTSITSRTADAPHATRIDAQTGALSPAAGGVG
TTIEVRDLYFSTPARRKFLKSEQTEFGHCLEVIRRAALSRPDVAFSVLHNGRAVEHWN
AASAAARTAKILGEAFATSHLPLEEAAGPIAIYGFAGLPTASRGRADQQYFFVNGRFV
RDKLLTHAVRAAYEDVLHGDRYPAYVLFLDLPPEGVDVNVHPSKIEVRFRDSRSIHQF
VFHAVQRALARHAGASPDTTAAGHAAYLTPTVPDTASPGAEAGGGVDAGSLARSSAAS
ALSGAAPPQSGGQSAGLRRGGPAATPGSSSWISHTRMRQGVLPVAQPLAVYDALFGRR
DTAAVPALPTHDDASAAPSPASGPAADQASSPMDAESTQSGPSATSEAHPASATNEAQ
PTSATHAVQPASAANGPAAASAQPLDEHPLGFALGQLHGIYVLAQNTRGLVLVDMHAA
HERILYEQFKHALAQRHIAVQPLLIPVTMQADAVEIGVAGEERETLDALGFDIASLSP
TTLAIRAVPALLKDADLVSLARAVLADLHAYGGSRVLTEHQHELLGTLACHHAVRANR
RLSIDEMNALLRQMEATERADQCNHGRPTWFQLTLNELDRLFMRGQ"
misc_feature complement(442682..443581)
/locus_tag="RBRH_01632"
/note="DNA mismatch repair protein MutL; Region: mutl;
TIGR00585"
/db_xref="CDD:161941"
misc_feature complement(443156..443521)
/locus_tag="RBRH_01632"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:28956"
misc_feature complement(order(443165..443167,443171..443176,
443207..443209,443213..443215,443291..443302,
443399..443404,443408..443410,443414..443416,
443420..443422,443480..443482,443489..443491,
443501..443503))
/locus_tag="RBRH_01632"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28956"
misc_feature complement(443489..443491)
/locus_tag="RBRH_01632"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:28956"
misc_feature complement(order(443294..443296,443300..443302,
443402..443404,443408..443410))
/locus_tag="RBRH_01632"
/note="G-X-G motif; other site"
/db_xref="CDD:28956"
misc_feature complement(442622..442990)
/locus_tag="RBRH_01632"
/note="MutL_Trans_MutL: transducer domain, having a
ribosomal S5 domain 2-like fold, found in proteins similar
to Escherichia coli MutL. EcMutL belongs to the DNA
mismatch repair (MutL/MLH1/PMS2) family. This transducer
domain is homologous to the second...; Region:
MutL_Trans_MutL; cd03482"
/db_xref="CDD:48470"
misc_feature complement(442694..442696)
/locus_tag="RBRH_01632"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:48470"
misc_feature complement(441602..442045)
/locus_tag="RBRH_01632"
/note="MutL C terminal dimerisation domain; Region:
MutL_C; pfam08676"
/db_xref="CDD:192121"
gene 443976..444722
/locus_tag="RBRH_03340"
/db_xref="GeneID:9986283"
CDS 443976..444722
/locus_tag="RBRH_03340"
/codon_start=1
/transl_table=11
/product="DedA family protein"
/protein_id="YP_004028125.1"
/db_xref="GI:312795203"
/db_xref="GeneID:9986283"
/translation="MRWRPDGFIEADGVFRYHPRQFPWFQGCLLDTFLQFLSLVLHID
KFLGDFIQQYGAWVYVVLFLIVFCETGLVVLPFLPGDSLLFIGGAFSASGSLDLLLLN
VLLLVAAIGGNTVNYLIGGYIGPKVFDAHWKFGERFLDRAALMKTHQFYERHGGKTIV
LARFVPVVRTFAPFVAGVSGMSMMRFQLYNVLGALLWVVLLTVCGYLFGNIPFIRDHL
NTIVLVGVATAVVPVALGAGWKMLRRRRAG"
misc_feature 444072..444629
/locus_tag="RBRH_03340"
/note="SNARE associated Golgi protein; Region:
SNARE_assoc; cl00429"
/db_xref="CDD:207043"
misc_feature 444102..444638
/locus_tag="RBRH_03340"
/note="Uncharacterized membrane-associated protein
[Function unknown]; Region: DedA; COG0586"
/db_xref="CDD:30931"
gene complement(444742..446319)
/locus_tag="RBRH_03339"
/db_xref="GeneID:9987549"
CDS complement(444742..446319)
/locus_tag="RBRH_03339"
/EC_number="3.5.1.28"
/codon_start=1
/transl_table=11
/product="N-acetylmuramoyl-L-alanine amidase"
/protein_id="YP_004028126.1"
/db_xref="GI:312795204"
/db_xref="GeneID:9987549"
/translation="MRCPMLIKPFRSIESAATASHCWRRRQILRAGASTLLLGLAAPR
TAHAAAVLGVRVWPARDYTRVTIESDQPLQNSQKLLQEPDRLVVDLDGLELDQTLKDL
VAKITPNDPQIQSVRVGQFQPHVVRMVFDLKGSVKPQVFALTPVGSYKYRLVFDLYPA
VPPDPLMELLAQTQRKEEALEQRSVPGATLSGPALAMPSPSDGAPGRDTLAGIAPPAS
GRGHASDNSDAFFQRFAQSDAVPPRDTPSAKPSQPPSAPPRPNGNTDGRALATRRDND
GYGFKVPPGKSGTVRLLTVAIDPGHGGEDPGAIGGAGTYEKHVVLDIGKRLRAKIDAQ
PNMRAMMTRDADFFVPLAVRVQKARRVGADLFVSIHADAFTSPQARGSSVFALSERGA
TSAAARWIAQKENAADQIGGVDFKTRDVTLTRALFDMSTTAQIRDSLKYGNYVLKEIS
GINKLHKGSVEQAGFAVLKAPDIPSILVETAFLSNPDEEQRLNSEAYRDQMANAILKG
IKRYFAANPPLSKNRMA"
misc_feature complement(445849..446160)
/locus_tag="RBRH_03339"
/note="AMIN domain; Region: AMIN; pfam11741"
/db_xref="CDD:204728"
misc_feature complement(444790..445440)
/locus_tag="RBRH_03339"
/note="N-acetylmuramoyl-L-alanine amidase or MurNAc-LAA
(also known as peptidoglycan aminohydrolase, NAMLA
amidase, NAMLAA, Amidase 3, and peptidoglycan amidase; EC
3.5.1.28) is an autolysin that hydrolyzes the amide bond
between N-acetylmuramoyl and L-amino...; Region:
MurNAc-LAA; cd02696"
/db_xref="CDD:119407"
misc_feature complement(order(444883..444885,445210..445212,
445372..445374,445417..445419))
/locus_tag="RBRH_03339"
/note="active site"
/db_xref="CDD:119407"
misc_feature complement(order(445210..445212,445372..445374,
445417..445419))
/locus_tag="RBRH_03339"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:119407"
gene complement(446301..446834)
/locus_tag="RBRH_03338"
/db_xref="GeneID:9987548"
CDS complement(446301..446834)
/locus_tag="RBRH_03338"
/codon_start=1
/transl_table=11
/product="ATP/GTP hydrolase"
/protein_id="YP_004028127.1"
/db_xref="GI:312795205"
/db_xref="GeneID:9987548"
/translation="MYAMPDAQASPRPLTERVFALPNEHAANTFGATLAAAITAAMRA
APAHGMQVHLVGELGAGKTTLVRAMLRALGHAQRVRSPTYTLVEPYTIENVDGAPLSI
YHFDLYRFADPAEWEDAGFREYFDTGALCLIEWPQRAGGVLGVPDLQIELEVQGEGRK
LTARAYSEIGKECVARC"
misc_feature complement(446307..446681)
/locus_tag="RBRH_03338"
/note="Uncharacterized P-loop hydrolase UPF0079; Region:
UPF0079; cl00520"
/db_xref="CDD:207088"
gene 446795..447994
/locus_tag="RBRH_03337"
/db_xref="GeneID:9987547"
CDS 446795..447994
/locus_tag="RBRH_03337"
/codon_start=1
/transl_table=11
/product="iron-sulfur cluster-binding protein"
/protein_id="YP_004028128.1"
/db_xref="GI:312795206"
/db_xref="GeneID:9987547"
/translation="MDEARLVHLALRTIERMKQPPDTEIHRAMLTDADLASLARRVRE
WARELGFSAIGICDIDLSHAEAGLAAWIDAGYHGEMDYMAKHGMKRARPAELVPGTQR
VISARMPYLPAGTPASWRAREHARLADPSAAVVSIYARGRDYHKVMRQRLQRLAERIE
AAIGPLGYRVFTDSAPVLEVELAQKAGLGWRGKHTLLLDRDAGSLFFLGEIFVDVPLP
TDAQSQPSRAPQQAGAHCGACTRCIDACPTGAIVAPYRLDARKCISYLTIELRGSIPV
ELREAIGNRVYGCDDCQLVCPWNKFAQPSGCADFDVRNGLDGAQLIELFGWSEQDFDT
RLAGSAIRRIGYERWLRNLAVGLGNALRAGGGAQGRDAVLAALRKREDDPSALVREHV
RWALGYE"
misc_feature 446906..447985
/locus_tag="RBRH_03337"
/note="Uncharacterized Fe-S protein [Energy production and
conversion]; Region: COG1600"
/db_xref="CDD:31788"
misc_feature 447062..447316
/locus_tag="RBRH_03337"
/note="Domain of unknown function (DUF1730); Region:
DUF1730; pfam08331"
/db_xref="CDD:149403"
gene 448097..448588
/locus_tag="RBRH_03336"
/db_xref="GeneID:9987546"
CDS 448097..448588
/locus_tag="RBRH_03336"
/EC_number="2.1.1.63"
/codon_start=1
/transl_table=11
/product="O6-methylguanine-DNA methyltransferase"
/protein_id="YP_004028129.1"
/db_xref="GI:312795207"
/db_xref="GeneID:9987546"
/translation="MFNAVIDAPFGRVGIRSDDRFVHEIVYLPGTTLLREPDNALARR
AAAQIVAYFEQADTVFDLPLSLAGTAFQRRVWDGICRIAPGTVWTYGQLAASIGAVPR
AVGQACGSNPAPLVVPCHRVVAANGLGGFAHHAGKGFFHDVKCWLLRHEGIRVPQQGE
LYA"
misc_feature 448097..448555
/locus_tag="RBRH_03336"
/note="Methylated DNA-protein cysteine methyltransferase
[DNA replication, recombination, and repair]; Region: Ada;
COG0350"
/db_xref="CDD:30699"
misc_feature 448307..448552
/locus_tag="RBRH_03336"
/note="The DNA repair protein O6-alkylguanine-DNA
alkyltransferase (ATase; also known as AGT, AGAT and MGMT)
reverses O6-alkylation DNA damage by transferring O6-alkyl
adducts to an active site cysteine irreversibly, without
inducing DNA strand breaks. ATases...; Region: ATase;
cd06445"
/db_xref="CDD:119438"
misc_feature order(448307..448312,448364..448369,448391..448393,
448400..448405,448409..448411,448418..448423,
448427..448429,448451..448453,448466..448468,
448502..448504)
/locus_tag="RBRH_03336"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:119438"
misc_feature order(448364..448366,448451..448456,448460..448462,
448547..448549)
/locus_tag="RBRH_03336"
/note="active site"
/db_xref="CDD:119438"
gene 448585..449511
/locus_tag="RBRH_03335"
/db_xref="GeneID:9987545"
CDS 448585..449511
/locus_tag="RBRH_03335"
/codon_start=1
/transl_table=11
/product="integrase/recombinase (XerD/RipX family)"
/protein_id="YP_004028130.1"
/db_xref="GI:312795208"
/db_xref="GeneID:9987545"
/translation="MSDVQVQQASASRDTSAQAIDAFCDALWLEHGLSRNTLDAYRRD
LSLYCDWLAATHERTLDATRESDLNGYLAVRSDGKASSANRRLSVFRRYFAWALREHR
VAADPTLRIRSARQPPRFPSSLNEAQVEALLGAPDLDTPLGLRDRAMLELMYASGLRV
SELVTLKTVEVGLNEGVVRVMGKGAKERLVPFGDEARGWLERYLRDARAVLLGARGAD
ALFVTARGGAMTRQQFWNIIKRYALRADIHVPLSPHTLRHAFATHLLNHGADLRVVQM
LLGHSDISTTQIYTHVARERLKALHAIHHPRG"
misc_feature 448618..449508
/locus_tag="RBRH_03335"
/note="site-specific tyrosine recombinase XerD; Reviewed;
Region: xerD; PRK00283"
/db_xref="CDD:178959"
misc_feature 448642..449487
/locus_tag="RBRH_03335"
/note="XerD and XerC integrases, DNA breaking-rejoining
enzymes, N- and C-terminal domains. XerD-like integrases
are involved in the site-specific integration and excision
of lysogenic bacteriophage genomes, transposition of
conjugative transposons, termination...; Region:
INT_XerDC; cd00798"
/db_xref="CDD:29499"
misc_feature order(449059..449061,449131..449133,449344..449346,
449353..449355,449422..449424,449449..449451)
/locus_tag="RBRH_03335"
/note="Int/Topo IB signature motif; other site"
/db_xref="CDD:29499"
misc_feature order(449059..449061,449344..449346,449353..449358,
449449..449451)
/locus_tag="RBRH_03335"
/note="active site"
/db_xref="CDD:29499"
gene 450269..450379
/locus_tag="RBRH_04045"
/db_xref="GeneID:9987544"
CDS 450269..450379
/locus_tag="RBRH_04045"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028131.1"
/db_xref="GI:312795209"
/db_xref="GeneID:9987544"
/translation="MLRPVGEAFAIARNTLRMSFKLLIVDDTEYAMSSVD"
gene 450548..451225
/locus_tag="RBRH_03334"
/db_xref="GeneID:9988019"
CDS 450548..451225
/locus_tag="RBRH_03334"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028132.1"
/db_xref="GI:312795210"
/db_xref="GeneID:9988019"
/translation="MRHVMRIFGRSSALDTAFASLKEALPTKPRINSKVFTQKLPNAI
SGLTTLQSTKENKIRLGFRVGSMPLKDINEKLKNSFGEIKTKGASRQSSSASNKDRRE
LQALVSDVLVQAKKLETLADKIRRDINGNEKHSGLNERISFEPELYAIYKDLIAESKS
AKNKIYDTMQDNGYSRQHGGLQYGVGLSKKEHDNMIKGLNRIKLSMQSKFRFAEQKID
NLKRNLA"
gene complement(451304..452911)
/locus_tag="RBRH_03333"
/db_xref="GeneID:9987543"
CDS complement(451304..452911)
/locus_tag="RBRH_03333"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028133.1"
/db_xref="GI:312795211"
/db_xref="GeneID:9987543"
/translation="MDFNTTPPPNPHNAALYAPIDSHESGPNSPPSGFFSVGDPNTAQ
RQASGSYSGIAPIERVQAFLKTLRKKNVEMEVRIRSLRELLDGLQGDVADPNIRLAAL
DRLAMSGISKLPSEEQTEAFAHIFAEVLKIPNSKALQDKMIHHFESDYHVLSTWGLGS
DHVVPAESMIAVFDEILNRTIDSPLEERRKILPSLTLQLDSSHWTGEQTWAAVHGRPY
KPRPELTTRFDRLLNEMARLDDIGRVALSTRLADRLFMLHCLDRNLVLERHRRLLNYV
EALPENLQSRPRKALGRAIRWLPEHTRLATYESMLNAANRLMVGKGEALSGLPEAMIG
LSAGEQNRRLQQWKYEILPMLDPSDQDPIVAGLIAAFGKLAEGNNPEFALALALDTFD
RTSGGKSIDEELFDDIVQGIGANLAHTYSPETLGRVLDLCSHIPAEARERHLLDLERW
LDWKLLNKALNKPLNKQEQLLLPLQARARDERAKLVSEPLLNLDPDPLPVTWWEDPSR
RKAPGHAGDERRRRPIVDWFKARLGRR"
gene complement(453353..453505)
/locus_tag="RBRH_03332"
/db_xref="GeneID:9987542"
CDS complement(453353..453505)
/locus_tag="RBRH_03332"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028134.1"
/db_xref="GI:312795212"
/db_xref="GeneID:9987542"
/translation="MVAELLLNLEPNPLPVTWWDNSSQQKAASHASDERRRRPIVDWI
KARLRR"
gene 453579..453761
/locus_tag="RBRH_03331"
/db_xref="GeneID:9987541"
CDS 453579..453761
/locus_tag="RBRH_03331"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028135.1"
/db_xref="GI:312795213"
/db_xref="GeneID:9987541"
/translation="MTTAKTVRKNAKNDDKTQIVGIRMTPTLAQEVKMEATKRGITLK
VLFAELWENRKHRVQS"
gene 453728..455347
/locus_tag="RBRH_03330"
/db_xref="GeneID:9987540"
CDS 453728..455347
/locus_tag="RBRH_03330"
/EC_number="2.1.1.72"
/codon_start=1
/transl_table=11
/product="Modification methylase XamI"
/protein_id="YP_004028136.1"
/db_xref="GI:312795214"
/db_xref="GeneID:9987540"
/translation="MGKPQTPCSVMNSIQTENDLIAVAAALVGPSAVLSPGEKALLKK
VSKRAIKPAYLGTIRDNILAGNDPLGNAFAAIRSAIERRAAGAVYTPLPIVRSMMAWL
SAQSTPSRIVDPGAGSGRFILAAGETFPDAQLVAVEMDPLAALMLRANLSARGWTDRA
TLLVNDYREIKLPPCTGMTAFIGNPPYVRHHDIAEDWKAWYASNFAKFGIKASALAGL
HLHFFLQTRLLAKPGDMGAFITSAEWMDVNYGSALRRLLLEELGGIALHVLEPTVEAF
PGTATTAAITCFCVGERDEPVRVRDVGELEQLNGLAKGTEIPRERLQAAPRWSIIVRP
SEPTTAGDIELGELFRVHRGQVTGANDIWIAGEHAKDLPERVKLPAVTKAKDLILAGA
QLQSAEALRRVIDLPAELDDFTQEERCRINAFLSWAKLNGADQSYIAQHRKAWWSVGL
KAPAPILCTYMARRPPQFTLNACDARHINVAHGLYPREPLADGLMVRLVTWLNKNINT
GSGRTYAGGLTKFEPKEIERLRIPSLETLLA"
misc_feature 454055..>454327
/locus_tag="RBRH_03330"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cd02440"
/db_xref="CDD:100107"
misc_feature order(454067..454087,454139..454144,454220..454228,
454277..454279)
/locus_tag="RBRH_03330"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
gene 455344..456261
/locus_tag="RBRH_03329"
/db_xref="GeneID:9987539"
CDS 455344..456261
/locus_tag="RBRH_03329"
/EC_number="3.1.21.4"
/codon_start=1
/transl_table=11
/product="Type II restriction enzyme XamI"
/protein_id="YP_004028137.1"
/db_xref="GI:312795215"
/db_xref="GeneID:9987539"
/translation="MTSAPPRWTIAELAKDAATSAGQFRAERLAVSDSWETHYTQARG
KFELLFKKLSDLNPGAITDDNLAEAYNLGLGEALRYLAGPPISDDDLQVIADVDSIAP
GVLKKNPEALRKVFKVIERVIDLHRFPWIEAGGAPTEQQREAALLASSVLLAAQRIAT
ERRNEGKENQETKVKDYLRSLGFTEAPAVAINTIVKGPQAMQFCAECQLGERKADVVV
RLHDTRLMAIECKVSNSATNSVKRLNNDAAVKAEYWIKQFGIAQVVPAAALAGVFKVL
NLEQAQARGLSLFWSHDLDKLGAFIESTK"
misc_feature 455500..456213
/locus_tag="RBRH_03329"
/note="XamI restriction endonuclease; Region: RE_XamI;
pfam09572"
/db_xref="CDD:118108"
gene 456321..456437
/locus_tag="RBRH_03328"
/db_xref="GeneID:9987538"
CDS 456321..456437
/locus_tag="RBRH_03328"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028138.1"
/db_xref="GI:312795216"
/db_xref="GeneID:9987538"
/translation="MRQWNRLISISGRTKQTSRTHRRVPIRIAYENVEDLRP"
gene 456546..456641
/locus_tag="RBRH_03327"
/db_xref="GeneID:9987537"
CDS 456546..456641
/locus_tag="RBRH_03327"
/codon_start=1
/transl_table=11
/product="transposase"
/protein_id="YP_004028139.1"
/db_xref="GI:312795217"
/db_xref="GeneID:9987537"
/translation="MLPKLGWLRYRHCRCVLGTVKNVTVNLSCYK"
gene 456845..457354
/locus_tag="RBRH_03326"
/db_xref="GeneID:9987536"
CDS 456845..457354
/locus_tag="RBRH_03326"
/codon_start=1
/transl_table=11
/product="Regulatory protein"
/protein_id="YP_004028140.1"
/db_xref="GI:312795218"
/db_xref="GeneID:9987536"
/translation="MSRLISMAKNKHVSQTPATQLLRQHHIEFGEHFYDYVEHGGTAE
SARQLGVEEHCVIKTLVMEDEHAKPLIVLMHGDRTVSTKNLARQIGAKRIEPCRPDVA
NRHSGYLVGGTSPFGTRKPLPVYVERTILSLERIYLNGGRRGYLVSLAPAVLTALLAA
TPVDCASGG"
misc_feature 456890..457279
/locus_tag="RBRH_03326"
/note="This CD includes cysteinyl-tRNA(Pro) deacylases
from Haemophilus influenzae and Escherichia coli and other
related bacterial proteins. These trans-acting,
single-domain proteins are homologs of ProX and also the
cis-acting prolyl-tRNA synthetase (ProRS)...; Region:
YbaK_deacylase; cd00002"
/db_xref="CDD:88582"
misc_feature order(457016..457018,457175..457180,457259..457261)
/locus_tag="RBRH_03326"
/note="putative deacylase active site [active]"
/db_xref="CDD:88582"
gene 457470..458108
/locus_tag="RBRH_03325"
/db_xref="GeneID:9987535"
CDS 457470..458108
/locus_tag="RBRH_03325"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028141.1"
/db_xref="GI:312795219"
/db_xref="GeneID:9987535"
/translation="MANLLVAVVAYLIGSISFAVVVSAAMGLSDPRTYGSKNPGATNV
LRSGNKAAAILTLLGDAFKGWLAVWLVKHAGAAYGLDAFSVALASIAVFVGHLYPVFF
RFKGGKGVATAAGVLLAIDPVLGIATAATWLIIAFFFRYSSLAALIAALFAPLFDLFM
FGGNPVAGAIMAMSVLLVWRHRANISKLLAGQESRIGDKKGAPGRGGDGGGR"
misc_feature 457470..458057
/locus_tag="RBRH_03325"
/note="putative glycerol-3-phosphate acyltransferase PlsY;
Provisional; Region: PRK00220"
/db_xref="CDD:178934"
gene complement(458121..458636)
/locus_tag="RBRH_03324"
/db_xref="GeneID:9987534"
CDS complement(458121..458636)
/locus_tag="RBRH_03324"
/codon_start=1
/transl_table=11
/product="protein yajQ"
/protein_id="YP_004028142.1"
/db_xref="GI:312795220"
/db_xref="GeneID:9987534"
/translation="MLAVLSGENAMPSFDVVVEANMVEVKNAVEQSNKEISTRFDFKG
SDARVEQKERELTLFADDDFKLGQVKDVLLQKMAKRQVDVRFLDYGKIEKIGGDKVKQ
LVTVKKGVAGDLAKKIVKLVKDSKIKVQASIQGDAVRVSGTKRDDLQSVIAILRKEVS
EAPLDFNNFRD"
misc_feature complement(458127..458603)
/locus_tag="RBRH_03324"
/note="Proteins similar to Escherichia coli YajQ; Region:
YajQ_like; cd11740"
/db_xref="CDD:213038"
gene 458794..459858
/locus_tag="RBRH_03323"
/db_xref="GeneID:9987533"
CDS 458794..459858
/locus_tag="RBRH_03323"
/EC_number="1.1.1.158"
/codon_start=1
/transl_table=11
/product="UDP-N-acetylenolpyruvoylglucosamine reductase"
/protein_id="YP_004028143.1"
/db_xref="GI:312795221"
/db_xref="GeneID:9987533"
/translation="MTAFAMSRLPDADLAPNALQAEYSLRDHNTFGFDVRARLGGVIR
SEAALAALRADGRIAGMPRLVLGAGSNVVLTRDFDGLALVIDLRGRRVVAQTDDAYIV
EAAAGERWHDFVDWTLQQGMAGLENLALIPGTVGAAPVQNIGAYGLELAERFERLRAL
DMVDGRIVELDAPACAFGYRDSVFKHAARDRLIILSVTFRLPKRWRARASYADVASRL
AASGIGEPTARQIFDAVTAIRREKLPDPAVLGNAGSFFKNPIVDAEQFAALRAKEPDI
VCYTQRDGRVKLAAGWMIDRCGWKGRSIGAAAVHERQALVLVNRGGATGEQILALARA
IRADVSQRFGVLLDMEPLVV"
misc_feature 458848..459855
/locus_tag="RBRH_03323"
/note="UDP-N-acetylenolpyruvoylglucosamine reductase;
Provisional; Region: murB; PRK00046"
/db_xref="CDD:178820"
misc_feature 458923..459306
/locus_tag="RBRH_03323"
/note="FAD binding domain; Region: FAD_binding_4;
pfam01565"
/db_xref="CDD:201863"
misc_feature 459481..459846
/locus_tag="RBRH_03323"
/note="UDP-N-acetylenolpyruvoylglucosamine reductase,
C-terminal domain; Region: MurB_C; pfam02873"
/db_xref="CDD:111727"
gene complement(459976..460908)
/locus_tag="RBRH_03322"
/db_xref="GeneID:9987532"
CDS complement(459976..460908)
/locus_tag="RBRH_03322"
/EC_number="2.1.3.3"
/codon_start=1
/transl_table=11
/product="ornithine carbamoyltransferase"
/protein_id="YP_004028144.1"
/db_xref="GI:312795222"
/db_xref="GeneID:9987532"
/translation="MTSTKTIRHYLQFRDFSADDYDYVLERARILKQKFKNYETYHPL
HDRTLAMIFEKNSTRTRLSFEAGIFQLGGHAVFMSTRDTQLGRGEPIEDAAQVISRMV
DIIMIRTFGQDILRRFAQNSRVPVINGLTNEYHPCQVLADVFTFHEHRGPIRGKTVAW
VGDANNMAYTWIEAAHILGFKLRVSTPPGYRLDHASIDPAHLASVEETDDPRAACEGA
HLVTTDVWTSMGFEQENDARKAAFADWCVDAELMALAQPDALFMHCLPAHRGEEVSAD
VIDGRQSVVWDEAENRLHVQKALMEFLMLGRLNH"
misc_feature complement(459997..460899)
/locus_tag="RBRH_03322"
/note="ornithine carbamoyltransferase; Provisional;
Region: PRK00779"
/db_xref="CDD:179122"
misc_feature complement(460462..460887)
/locus_tag="RBRH_03322"
/note="Aspartate/ornithine carbamoyltransferase,
carbamoyl-P binding domain; Region: OTCace_N; pfam02729"
/db_xref="CDD:202362"
misc_feature complement(460000..460446)
/locus_tag="RBRH_03322"
/note="Aspartate/ornithine carbamoyltransferase, Asp/Orn
binding domain; Region: OTCace; pfam00185"
/db_xref="CDD:201065"
gene 460948..461184
/locus_tag="RBRH_03321"
/db_xref="GeneID:9987531"
CDS 460948..461184
/locus_tag="RBRH_03321"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028145.1"
/db_xref="GI:312795223"
/db_xref="GeneID:9987531"
/translation="MPPLAMWIILSSIKDFGAFDEPAYVCCRAGPGIATLYCAGRFLY
AGDAAGSPAGNKAGARQLVRASGSARRLLSGQAT"
gene 461310..461786
/locus_tag="RBRH_03320"
/db_xref="GeneID:9987530"
CDS 461310..461786
/locus_tag="RBRH_03320"
/codon_start=1
/transl_table=11
/product="PhnO protein"
/protein_id="YP_004028146.1"
/db_xref="GI:312795224"
/db_xref="GeneID:9987530"
/translation="MVSRCACGGTRCGKHVRASRSLICPVRGCRRVGAGGAVFQVFHM
GDSSSTEYFIQGITKSGKKFRPSDWSERLCGVMSSFGPGATGPNAKLKYSLYVRPVML
GDIKTVIVDSRLRDIEPMAFDFVMNFARDNDLVVTEACELPIEHPVQRATPKREVG"
misc_feature 461448..461735
/locus_tag="RBRH_03320"
/note="Protein of unknown function (DUF3579); Region:
DUF3579; pfam12112"
/db_xref="CDD:152547"
gene complement(462039..462314)
/locus_tag="RBRH_03319"
/db_xref="GeneID:9987529"
CDS complement(462039..462314)
/locus_tag="RBRH_03319"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S20"
/protein_id="YP_004028147.1"
/db_xref="GI:312795225"
/db_xref="GeneID:9987529"
/translation="MANSAQARKRARQAAKANSHNSALRSKMRTAIKAVRKAIESGDK
AKAAEVLKQSSKTLDIIADKKIIHKNKAARHKSRLAAAIKGLAQAAA"
misc_feature complement(462078..>462257)
/locus_tag="RBRH_03319"
/note="30S ribosomal protein S20; Reviewed; Region: rpsT;
PRK00239"
/db_xref="CDD:178943"
gene 462630..464180
/locus_tag="RBRH_03318"
/db_xref="GeneID:9987528"
CDS 462630..464180
/locus_tag="RBRH_03318"
/codon_start=1
/transl_table=11
/product="virulence factor mviN"
/protein_id="YP_004028148.1"
/db_xref="GI:312795226"
/db_xref="GeneID:9987528"
/translation="MNLLRALVTVSGFTLLSRITGLARETLIARAFGASLYTDAFNVA
FRIPNLLRRLSAEGAFSQAFVPILAEFKNQKGHEATRTLVDATATVLAWVLVGLSVLG
IAGAGFVVWMVASGLRHDAQAFEISVTMTRIMFPYIALISLTSLASGVLNTYRNFSLP
AFAPVLLNVSFIVAALVVAPRLATPIYALAFAVLAGGVLQLLAQLPGLKRVQMMPRIG
LNPARALAHPGVKRVLWKMMPASFAVSVAQLSLIVNTNIASHLAPGSVSWLSYADRLM
EFPTALLGVALGTILLPSLSKAHADADASEYSALLDWGLRLTFLLAAPSAVALFVYAE
PLTATLFNYGRFSGHDVMMVSRALAAYGAGLLGLILIKILAPGFYAKQDIKTPVKIAL
AVLVVTQLCNVVFVPHLAHAGLSLSIGIGACVNALLLFAGLRRRSIYVPSAGWGLFFV
QLAGACLVLAGVMRWFNQSFDWVALGLHPGMRIAALGATLILFAALYFAMLFLMGFKY
TYFRRRVK"
misc_feature 462630..464090
/locus_tag="RBRH_03318"
/note="Uncharacterized membrane protein, putative
virulence factor [General function prediction only];
Region: MviN; COG0728"
/db_xref="CDD:31072"
gene 464188..465030
/locus_tag="RBRH_03317"
/db_xref="GeneID:9987527"
CDS 464188..465030
/locus_tag="RBRH_03317"
/codon_start=1
/transl_table=11
/product="transcriptional regulator"
/protein_id="YP_004028149.1"
/db_xref="GI:312795227"
/db_xref="GeneID:9987527"
/translation="MTTSRIFDFFTTLVAQDESLPLTEAALSLAQDAYPDLDVQGTLA
DIDALVVRLRRRMPQGADVAQKLSMLNRFFFRELGFCANLNDYYDPDNSHLNMVLKKR
RGVPISLAVIYLEMAEQLGLPVKGVSFPGHFLLRATIAEGEVMLDPTTGESLSESRMV
EMLEPYLDRGGQSIAGTLHALLQPATEREIIARMLRNLKAIYLQTERWQRLLAVQQRL
VILLPENIEEVRDRGFAYARLDYLRPALDDLERYLEQEPDAADATVIESQLQELRQRT
RHGD"
misc_feature 464242..465018
/locus_tag="RBRH_03317"
/note="Uncharacterized conserved protein [Function
unknown]; Region: COG2912"
/db_xref="CDD:32736"
misc_feature 464314..464775
/locus_tag="RBRH_03317"
/note="Transglutaminase-like superfamily; Region:
Transglut_core2; pfam13369"
/db_xref="CDD:205548"
misc_feature <464761..464961
/locus_tag="RBRH_03317"
/note="Tetratricopeptide repeat domain; typically contains
34 amino acids
[WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
a variety of organisms including bacteria, cyanobacteria,
yeast, fungi; Region: TPR; cl02429"
/db_xref="CDD:207591"
misc_feature order(464773..464778,464782..464787,464794..464799,
464875..464880,464887..464892,464899..464904)
/locus_tag="RBRH_03317"
/note="binding surface"
/db_xref="CDD:29151"
misc_feature order(464782..464784,464818..464820,464830..464832,
464839..464841,464884..464886,464920..464922,
464932..464934,464941..464943)
/locus_tag="RBRH_03317"
/note="TPR motif; other site"
/db_xref="CDD:29151"
gene 465150..465251
/locus_tag="RBRH_04044"
/db_xref="GeneID:9987526"
CDS 465150..465251
/locus_tag="RBRH_04044"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028150.1"
/db_xref="GI:312795228"
/db_xref="GeneID:9987526"
/translation="MNGHRRFHPQKDRALMQSDVWDKTPARSVAKAV"
gene complement(465365..467284)
/locus_tag="RBRH_03316"
/db_xref="GeneID:9988018"
CDS complement(465365..467284)
/locus_tag="RBRH_03316"
/codon_start=1
/transl_table=11
/product="hemolysin activator protein"
/protein_id="YP_004028151.1"
/db_xref="GI:312795229"
/db_xref="GeneID:9988018"
/translation="MPCPGHRPHSIRKNTARDGPAHPGGPPRHANIRSPLAAPAPICQ
GAPALPTSTALVPLRYAGPLAGCTALLLGAIGTSPGALAQNPPESTPQTAYPEQRLEQ
QRQAQEREQAINTPAVRSSAPPAAAYPVLPTEQPCFRIEHFALEVPKQLPAAVRAQGA
SALPQDRFAFARQWLAHYAGQCVGKQGLNRIVSGLAQKILSRGYITSRVMLAEQDLSH
GKLTVTLVPGVIHAVRFSEPTIRGTWKSAFPARAGDALNLRDLEQGLEQFKRVPSQDV
DMRIEPAQMPGQSDVVIQVRRAKPWTLVASVDNSGARATGKLQGQVSVGVDNPLGLND
MLNVGANHDLSFGDKRLGSHGWNASYSIPYGYWTASLFASTNTYYQQIAGVNHTFVAS
GNSQFVDARVHRTLARSQAGVFGVQLRGIKRFGASFIEDTEIKQQRRNNTFIELGLTH
RHYFGGAQFDGLLAYRQGLGWLGAMPALPRGCPTYRLRMASLDANLSVPFTLAGQPLR
YVSAAHGQFTNNRLFYLDGLTIGSRYTVRGFDGETMLAGERGFYWRNELQAPIAHTGQ
HAYAALDYGQVFGPLTQGQSGMQLAGAALGLRGTVPTRLATYTYELSAGTPLYHPSAL
STARVTVGFRLSAQL"
misc_feature complement(465368..466888)
/locus_tag="RBRH_03316"
/note="Hemolysin activation/secretion protein
[Intracellular trafficking and secretion]; Region: FhaC;
COG2831"
/db_xref="CDD:32659"
misc_feature complement(466601..466822)
/locus_tag="RBRH_03316"
/note="POTRA domain, ShlB-type; Region: POTRA_2;
pfam08479"
/db_xref="CDD:117056"
misc_feature complement(465419..466543)
/locus_tag="RBRH_03316"
/note="Surface antigen; Region: Bac_surface_Ag; cl03097"
/db_xref="CDD:155280"
gene 467287..476295
/locus_tag="RBRH_03315"
/db_xref="GeneID:9987525"
CDS 467287..476295
/locus_tag="RBRH_03315"
/codon_start=1
/transl_table=11
/product="Hemolysin"
/protein_id="YP_004028152.1"
/db_xref="GI:312795230"
/db_xref="GeneID:9987525"
/translation="MVGQWRIFILKWLNCPTRLTYMAMRWILVGVEPVWRVGRARFVA
LGLSAWPAWGLAQIVPAPGGETRVIQTQNGLPQVDIARPSGAGVSVNHYHQFDVQAPG
AILNNASAVVKTDQAGYINGNPHFDPNQSARLIVNEVHSLEASQLRGHVEVAGPRAEV
VVANPSGIVVNGGGFINTSRATLTTGQPYYGADGSLAGFNVSRGLVTVHGAKFNASDI
DQVDLIARAVQANAKIYAKNLNVVTGANQVPYDTLAATPIHGDGPAPSVSIDVGQLGG
MYADRIVMVGTEYGVGVHSAGEISAQAGDLTLHSNGKLTLTPTSQTNASGLLSVRVQA
DVQNDGKLYGKQDVSVSSESLLTNTGTLAAQRNLKVTAHSMNSSGGLGAGADADGVID
STGELEVKTTGSLVATGHQLAGGNMTLEGAAVDLKHSETLTDGHLELHAKSGDIDLTG
AEVVSQGTARIIAADGVVNHNRGKLSSGDTQTIRAAALSNQDGQIFSESTLDIDVAGK
MDNLRGLARAAGRVFVKAGSLDNTAGRVTLRSDDELSVTTAGQLTNAAGHTVIGDQGG
VIGGNGNVKVQAGTLNNRGRVSAKEILKVRGQSIDNTDGTLSAKRLDVKADSLTNEGG
LIAQTGKGDTKVSVTHKLDNALGTIRSNGANLTLSVGSLMNNKGTLYYGGSGTLKVTE
ASTLMNLGGLIDSTGAIDVDGQSIDNTGGVIRTKSGSVTLTSASTLKNNQGVVQGGNG
LKVSSADTLFNQEGTLVSLSPTGTLTVSAQELDNTNGQIADTGTVHTLIKATSIHNAN
TNSQTHRGVIRGKGDVTIDSAAVQNGANGQIVADRDLTFKNTDQLTNAGQLTADGALT
VDQPDAALFNVDGQISATKIKLTVASLDNTGGQIANPKGSSGDIKMQTGVLTHHAGTI
ASARDLQLSAASLIGDGQLIGGRDAAISLQGDYTHGANNRITANRNLIFSTTGQLTNA
GKLLAVGNLTTRSNGLINRGEIGSGTHGVPGTGITTLEAGGGELTNEGKINGNAITTT
SQHLTNTGSIIGDTLTHTANTIVNDGARAVMAGTQQVNLYGANTVTNRNGATLVSLGD
LNIAKDDQKDSSGRLINQIDTVNNLSSTMEAHGLMNIAARQLNNIRQNVQIETRSSSS
THTMRQLPWWRPFPPGSSPAFQDANVHMHHAYYVNPADIISSTPILTPDGHWVTQLVV
NLPWNASVFEWKNSGLTYWRPNGGYQAQYQQDSRVTLPAGQVTLYAYDVKHGQSNPDQ
QGGTAWAEKFSKNIYLRSFGNTAYSNQYGNCTTNCVRIETYPGYTDPNTQFMKETERR
REGHWPVETQRIAHQTVTETELSPNSGAPALLTSGAAMNLTIGELVNNDNGTIAAGGD
LNVNGQKVPNGHGAAVIKNTSTQLTKTYSFTNQSGYNHVKDPYPGTPAEWVTWTNPSI
TFTTGIVGGTVTSNQAVTLDAGDIRNISVQATPVPVGADAAVLGLTDLDFGTGHGVGA
PRGAKQRSGAPGVIKTVAGVRTSRPQLKLPTSGLFTIQSAPNHPHLVVTDPRFTSYTQ
FVSSDYMLGQLDLDPQTVQKRIGDGYYESQLVMAQVTQLTGKRYLEGFTSNEDEYKQL
MTHGAAFGKQFSLKPGIALTDAQMEALTTDIVWLVNQTVTLADGSQQTVLAPQVYLAK
SNHVDVTPSGALIAGNTVQIKGTDIVNQGGTIAAKGDAALAASNDIQNLGGAIHADNL
ALMAGHDIINQSLINTEAQHFTTGASTHASIGALGTLNASGEMRMQAGHDLTVKGAQV
TTGGNLGVMAGHAVNIGTVETGSTIQTHNDARNTSAYRNTTQAGSALQTGGSLGVTSG
GDIGVMGSTLTSGADMALVGTGHVTIRDTTNRAAVNLSGAHDRDWAYDNHMVETNVAS
QLSAGGSATVVAGQGASGKQLEVLGSNIMAGTKGQGNGAVNLAASGDVTIAETRTRTR
GDAASHSEADKFLSSSSTDTARSYAGSNANGSLVSGETVSVSAGHDLNVRGSAVVSTH
GTALAAANNINIDTAQSTAQESSDYKHHQSGLLSGGELAVTIGSRRQSDQAQSSSLTH
HGSVVGSVKGSVTIDAGNELHVTGSELIVAKDVVGKAKTVTLETVADEQHHSGQHAMR
QSGVTLGVQTPGVAAVSNVVQQASAGAHSQDDRVRALRGIAGASGLYDAYQSVPGELG
TLAKGELPEAKLTVSIGSSGSRSAFSEDSTQARGNRVQAGGLAKFQATGEKDQGQGNV
IIHGSDIDAQNVHLEATHRVDLLNSTDTERMRNDNGSTSGSVGVSIGTKGLGVSASAA
RAKGDGNSDWAMQNNTHVRASDTVTIKSGGDTNVVSANVKGNRVVADVQGDLNVASVQ
DTSVSAAHQHSAGVGLNVSQGGGSASFNVQNGNARGNYASVAEQAGMQAGQGGFDIAV
KGNTDLKGAYISSEAAKDQNRLKTGTLSYSAIENHSDYQASTFGISGGATTGDGGNVY
KPTGSTSGKNAGGASPLYLSESGSSRARTQSAISAAEIEITNPDQQKQAIAGLNRDAT
NLNGRVDKTPDVQQSLQNQGELMSAMRDAGEAVARRIGDVADAKRDALLQAASESDDP
QLKQQYLAEAEQWDESGRYRVGLQSAGGSLVGGIGGGLLGAAQSGAGSLVSALLANKL
DEMSRQIVDQKPTGNADLDKTLGNIVANVMSSVAGGVVGGTQGAQAAYNVDRFNRQLH
QGEYDLAKRHAKLVAQQLKISEQEAEGRIVAEILRNSDQQTAEATGSKHDYEIRSIVG
CQNLNCYGDKKDLQYADHNYNSQYIKPNQEAYDAGQSQLGRGQTYNELVTSNINKDPV
GATVAGAGMMGLGLAAGGSLAPAGMMGAGALLGLGANGGVQLMGDQPFDWTSFALSGV
TSAVSTGMKFVPVFMTGVGGALTGSALQGQNPNAAMGGAAVGTVIGYPIGAKIEGKLN
DVLNPWYRQEWVDVGMGMSKYVAPSKLPSWLGGAAGGAAQEKMGATVQNKLDEEAAKK
"
misc_feature 467455..467850
/locus_tag="RBRH_03315"
/note="haemagglutination activity domain; Region:
Haemagg_act; pfam05860"
/db_xref="CDD:114580"
misc_feature <471820..473406
/locus_tag="RBRH_03315"
/note="Large exoproteins involved in heme utilization or
adhesion [Intracellular trafficking and secretion];
Region: FhaB; COG3210"
/db_xref="CDD:33023"
misc_feature 473197..473640
/locus_tag="RBRH_03315"
/note="Haemagluttinin repeat; Region: Fil_haemagg_2;
pfam13332"
/db_xref="CDD:205512"
misc_feature 473944..474414
/locus_tag="RBRH_03315"
/note="Haemagluttinin repeat; Region: Fil_haemagg_2;
pfam13332"
/db_xref="CDD:205512"
gene 476292..476543
/locus_tag="RBRH_03314"
/db_xref="GeneID:9987524"
CDS 476292..476543
/locus_tag="RBRH_03314"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028153.1"
/db_xref="GI:312795231"
/db_xref="GeneID:9987524"
/translation="MKPKTSFELFRWTYYFLFWFIGMGLCITIIELAAGPALQWLLYD
IPYQLPTWNRAGRMAVFVVLFSLFAGTVTWFSEKKSSGR"
gene 476721..476849
/locus_tag="RBRH_03313"
/db_xref="GeneID:9987523"
CDS 476721..476849
/locus_tag="RBRH_03313"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028154.1"
/db_xref="GI:312795232"
/db_xref="GeneID:9987523"
/translation="MSKQVIGDLHPRETMRRAWVNVLFTLAFRKSAGKNAERDQRC"
gene 476797..478197
/locus_tag="RBRH_03312"
/db_xref="GeneID:9987522"
CDS 476797..478197
/locus_tag="RBRH_03312"
/codon_start=1
/transl_table=11
/product="Hemolysin"
/protein_id="YP_004028155.1"
/db_xref="GI:312795233"
/db_xref="GeneID:9987522"
/translation="MRFASRRARTQSAISAAEIEITNPDQQKQAIAGLNRDATNLNGR
VDKTPDVQQSLQNQGELMSAMRDAGEAVARRIGDVADAKRDALLQAASESDDPQQKQQ
YLAEAEQWDESGRYRVGLQSAGGSLVGGIGGGLLGAAQSGAGSLVSALLANKLDAVSR
QIADQKPTGNADLDKTLGNIVANVMPSVAGGVVGGTQGAQAAYNVDRFNRQTNDNEKK
AIAEKAGSNKAEQERLVKAACYAVKCWAEYKPGSDEYTKHYVSQLEASQLQPEIDWVN
QQKEAGLFKYTPGQKIGDAVKSDPVGVAKDAAKVVVGGVTAKTGVGLCTTGLGCTVGG
WMAGFGLSEVVEGSTGLMNRYGGTASPGVNPLRFGFNQLAPQWGSTIYDGINFGMSIL
SLKAQVPLNVGIADGINRPASMFGVTIPRIDNVNLLPFIKQPWPYGTTQGVLLYGVGA
KGAAVVNDVRQTGDEK"
gene 478169..478321
/locus_tag="RBRH_03311"
/db_xref="GeneID:9987521"
CDS 478169..478321
/locus_tag="RBRH_03311"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028156.1"
/db_xref="GI:312795234"
/db_xref="GeneID:9987521"
/translation="MFGKQEMKNELAQTVCDIPNLFYCLLGLRNWRWMLVISYCRDMP
FDIQIG"
gene 478753..479016
/locus_tag="RBRH_03310"
/db_xref="GeneID:9987520"
CDS 478753..479016
/locus_tag="RBRH_03310"
/codon_start=1
/transl_table=11
/product="Hemolysin"
/protein_id="YP_004028157.1"
/db_xref="GI:312795235"
/db_xref="GeneID:9987520"
/translation="MTAEQAREELTIQTNLQVQNGAPGEWDQRAHEFLKQAHGMLPAD
GESGLGYMFYATPVQKAGPSMYAGTIRAAWGLTRPHQGSSMRQ"
gene 478971..479153
/locus_tag="RBRH_03309"
/db_xref="GeneID:9987519"
CDS 478971..479153
/locus_tag="RBRH_03309"
/codon_start=1
/transl_table=11
/product="Hemolysin"
/protein_id="YP_004028158.1"
/db_xref="GI:312795236"
/db_xref="GeneID:9987519"
/translation="MGLNAPSPGVINASVNHDAASREVIAKQTLGAASGAAAIAVGGP
VAALPGAPIRNRSSSI"
gene 479159..479497
/locus_tag="RBRH_03308"
/db_xref="GeneID:9987518"
CDS 479159..479497
/locus_tag="RBRH_03308"
/codon_start=1
/transl_table=11
/product="Hemolysin"
/protein_id="YP_004028159.1"
/db_xref="GI:312795237"
/db_xref="GeneID:9987518"
/translation="MDQWGESGSYRVGLQSAGGSLVGGIGGGLLGAAHSGTGSLVSTL
LANKLDEVSRQIADQKPTGNADLDKTLGNIVANAMSTVAGGVVGGAQGVQAAYNVDLT
RFAASWAARI"
gene 479479..480186
/locus_tag="RBRH_03307"
/db_xref="GeneID:9987517"
CDS 479479..480186
/locus_tag="RBRH_03307"
/codon_start=1
/transl_table=11
/product="Hemolysin"
/protein_id="YP_004028160.1"
/db_xref="GI:312795238"
/db_xref="GeneID:9987517"
/translation="MGCQNLNCYGDKKDPQYANHDYNRKFIEPNQEAYDAGQSQLGQG
QTYNELVTSNIQKDPVGSTLAGAGMIGLGVATAGGVPSLMRMAVGGSIGAGVNSGVQY
VFNNGKIDPVDAGAAGLAGALTFGTSLLPGMLMQTGGALLSSAVKEENPNVGMAGAAA
GSLIGYKVGGSLEKALNAKLNPWYQPEWVDVGFGMLRYVSPSVLPSTLGTIGGTATSE
GANNATGRILNPPESKK"
gene 480195..480434
/locus_tag="RBRH_03306"
/db_xref="GeneID:9987516"
CDS 480195..480434
/locus_tag="RBRH_03306"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028161.1"
/db_xref="GI:312795239"
/db_xref="GeneID:9987516"
/translation="MSRDVQALFLYIFICLITLAVLALVTEFGVIPIIVWMRNSSVYY
LPDLARMYAWCKLILFAAVVGGAGAWLYDRKRIGR"
gene 480468..481361
/locus_tag="RBRH_03305"
/db_xref="GeneID:9987515"
CDS 480468..481361
/locus_tag="RBRH_03305"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028162.1"
/db_xref="GI:312795240"
/db_xref="GeneID:9987515"
/translation="MTPALYRFNWQLHQDANPRKEERKRIEQDNAPAYAAAHAGMTVE
EATDRLVAQLLRQVDTTAASEGGWDQDAPNYLNAYAAAHPGETIGKDQWGNAVPLFGA
AAGYQRNDSTIFSASPQTTNPPPQLGLGAVGGYFAGMRQGLADTVSHPLDTLWGGIKG
AYGLVTDPQGTAQQMQEAARHVVTQAGEGNFGSAGQQVGRQVGSTVMGTAVGAGAGKA
AAVLKGKNTLASNYMYNAMTPGPLPDGVAGTFAGGRYSVGTVQASDTVFLGREMRAIR
VVLFLASRCPRAWRKRGSTMR"
gene complement(481898..482050)
/locus_tag="RBRH_03304"
/db_xref="GeneID:9987514"
CDS complement(481898..482050)
/locus_tag="RBRH_03304"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028163.1"
/db_xref="GI:312795241"
/db_xref="GeneID:9987514"
/translation="MLTFTQIRCLVQCAFFILARIRILMELPTEAASQISNCFWLFMA
SHLVPL"
gene 482058..482276
/locus_tag="RBRH_03303"
/db_xref="GeneID:9987513"
CDS 482058..482276
/locus_tag="RBRH_03303"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028164.1"
/db_xref="GI:312795242"
/db_xref="GeneID:9987513"
/translation="MAVEEATDRLAAQLLRQVDTTAASQGGWDQDASNYLNAYAAAHP
GETIGKDQWGNAVPLFGTAAGYQRNDSC"
gene 482292..482531
/locus_tag="RBRH_03302"
/db_xref="GeneID:9987512"
CDS 482292..482531
/locus_tag="RBRH_03302"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028165.1"
/db_xref="GI:312795243"
/db_xref="GeneID:9987512"
/translation="MGKNLQALLVYMLICLLTFIVGALFVEFVLRPFIVWLQGGKLYY
FPNLKRIYGWCKLIVFAAILCGFWAWLCDKNQINR"
misc_feature <482292..>482435
/locus_tag="RBRH_03302"
/note="putative PTS system transporter subunits IIBC;
Provisional; Region: PRK11404"
/db_xref="CDD:183120"
gene 482549..482752
/locus_tag="RBRH_03301"
/db_xref="GeneID:9987511"
CDS 482549..482752
/locus_tag="RBRH_03301"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028166.1"
/db_xref="GI:312795244"
/db_xref="GeneID:9987511"
/translation="MHQDANPCKEERKHIERDIPPAYAAAHAGMTVKEATESALNNPS
RLMQQGWKAETVLWGLQEAGILV"
gene 482781..483032
/locus_tag="RBRH_03300"
/db_xref="GeneID:9987510"
CDS 482781..483032
/locus_tag="RBRH_03300"
/codon_start=1
/transl_table=11
/product="transposase"
/protein_id="YP_004028167.1"
/db_xref="GI:312795245"
/db_xref="GeneID:9987510"
/translation="MGLKTLVSERDLLRQPLREQINLKHPLVRLADLIDWDRLSTAMS
ASFVSQRGRPATSPRLIAGLLYLGNPPKKPVGTEVEFSR"
gene 483047..483313
/locus_tag="RBRH_03299"
/db_xref="GeneID:9987509"
CDS 483047..483313
/locus_tag="RBRH_03299"
/codon_start=1
/transl_table=11
/product="transposase"
/protein_id="YP_004028168.1"
/db_xref="GI:312795246"
/db_xref="GeneID:9987509"
/translation="MKKSRFTDSQIMEALKRVEAGLAVPDLCRELGISTATFYKWRSK
YGGMDVSLMARMKELEAENARLRKMYVEEKIKAEIVSQALAKKD"
misc_feature 483050..483172
/locus_tag="RBRH_03299"
/note="Helix-turn-helix domain of Hin and related
proteins, a family of DNA-binding domains unique to
bacteria and represented by the Hin protein of Salmonella.
The basic HTH domain is a simple fold comprised of three
core helices that form a right-handed...; Region:
HTH_Hin_like; cd00569"
/db_xref="CDD:119388"
misc_feature order(483050..483058,483152..483157,483161..483169)
/locus_tag="RBRH_03299"
/note="DNA-binding interface [nucleotide binding]; DNA
binding site"
/db_xref="CDD:119388"
gene 483166..484134
/locus_tag="RBRH_03298"
/db_xref="GeneID:9987508"
CDS 483166..484134
/locus_tag="RBRH_03298"
/codon_start=1
/transl_table=11
/product="transposase"
/protein_id="YP_004028169.1"
/db_xref="GI:312795247"
/db_xref="GeneID:9987508"
/translation="MALEVRWHGRVADGADERTGSRECPAAQDVRRREDQGRNRFAGT
RKKGLRPSRRREMAMHAVSSRGISIRLACEAFGVSQSCYRYAGLRNAENEEIANWLLR
LIDNHRNWGFGLCFLYLRNVKGFGWNHKRVYRIYRELELNLRVKPRKRLVRQVPEPLS
VPTAVNQLWSMDFMHDQLADGRSIRLFNVIDDFNREALGIEIDFSLPSQRVIRALQQI
ISWRGRPKAIRCDNGPEYLSATITEWARQYGIRLDYIQPGKPQQNAYVERFNRTVRYE
WLSQYHWEDLEHVQRFATDWMWTYNHDRPNMALGGLTPKQRLAMAA"
misc_feature 483391..484113
/locus_tag="RBRH_03298"
/note="putative transposase OrfB; Reviewed; Region:
PHA02517"
/db_xref="CDD:177368"
misc_feature 483448..483612
/locus_tag="RBRH_03298"
/note="HTH-like domain; Region: HTH_21; pfam13276"
/db_xref="CDD:205456"
misc_feature 483661..483996
/locus_tag="RBRH_03298"
/note="Integrase core domain; Region: rve; pfam00665"
/db_xref="CDD:201381"
misc_feature 483907..484107
/locus_tag="RBRH_03298"
/note="Integrase core domain; Region: rve_3; pfam13683"
/db_xref="CDD:205859"
gene 484471..484563
/locus_tag="RBRH_04043"
/db_xref="GeneID:9987507"
CDS 484471..484563
/locus_tag="RBRH_04043"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028170.1"
/db_xref="GI:312795248"
/db_xref="GeneID:9987507"
/translation="MFRLFVQSLCGFMKKYYLAGRCWKTIGLEG"
gene 485741..486334
/locus_tag="RBRH_03296"
/db_xref="GeneID:9988017"
CDS 485741..486334
/locus_tag="RBRH_03296"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028171.1"
/db_xref="GI:312795249"
/db_xref="GeneID:9988017"
/translation="MLLKRDASNDLTFCFNGLLHQDANLRKDERKRIKQDNAPAYAAA
HAGMTVEEATDRLVAQLLRQVDTMAASQGGWDQDAPNYLNAYAAAHPGETIGKDQWGN
AVPLFGTASGYQRNDSTIFSVAPQTTNPPPQLGLGAVGEYLAGMGQRLADTIGHPLDT
LRAGLKAPMGLSRILRDAGGDASCGDAGRGRELWAGW"
gene 486282..486710
/locus_tag="RBRH_03295"
/db_xref="GeneID:9987506"
CDS 486282..486710
/locus_tag="RBRH_03295"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028172.1"
/db_xref="GI:312795250"
/db_xref="GeneID:9987506"
/translation="MLHVVTQAGGGNFGPAGEQVGQQFGLTVVSTAAGIGTGKTGMKF
VPVFMTGVGGALTGSALQGQNPNAAIGGAAVGTVIGYPIAAKIEGKLNDVLNPWYRQE
WVDVGMGMSKYVPPNFIPSWTGGFGGGVIQEKAGAAVQTR"
gene 486727..486954
/locus_tag="RBRH_03294"
/db_xref="GeneID:9987505"
CDS 486727..486954
/locus_tag="RBRH_03294"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028173.1"
/db_xref="GI:312795251"
/db_xref="GeneID:9987505"
/translation="MKSKTAFEWFRWVHNVLLWFIVAALIVTISELIAGPALQWLLYD
IPYQLPTWNRAGRMVVFVVVSSLLIGTLIWF"
gene 487391..487645
/locus_tag="RBRH_03293"
/db_xref="GeneID:9987504"
CDS 487391..487645
/locus_tag="RBRH_03293"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028174.1"
/db_xref="GI:312795252"
/db_xref="GeneID:9987504"
/translation="MSAMRDAGEAVARRIGDVADAKRDGLLKAAEESDDPQLKQQYLA
EADQWGESGSYRVGLQSAGSSLVGALVEGCWGRRKAVRGR"
gene 487642..488187
/locus_tag="RBRH_03292"
/db_xref="GeneID:9987503"
CDS 487642..488187
/locus_tag="RBRH_03292"
/codon_start=1
/transl_table=11
/product="Hemolysin"
/protein_id="YP_004028175.1"
/db_xref="GI:312795253"
/db_xref="GeneID:9987503"
/translation="MMSALLANKLDAVSRQIADQKPTGNADLDKTLGNIVANAMSTVA
GGVVGGAQGAQAAYNVDRFNRQLDLQEKALAQQLAEKSGGKYSQQQIEDQMRQMSMTD
GGPIYAGSPDILIGDQRPTDAQAKWIYGGKTADGNPILAQATVANDTELQRYIVDTVR
SSDVPSTISYTAAPTQLEMGP"
gene 488260..488679
/locus_tag="RBRH_04042"
/db_xref="GeneID:9987502"
CDS 488260..488679
/locus_tag="RBRH_04042"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028176.1"
/db_xref="GI:312795254"
/db_xref="GeneID:9987502"
/translation="MFYYPPDLPKEQIADATSTVSTMAGRVGAFTTAVASIPGPHVPE
TAAIGLMATTVGFVATNIEQTMRPDTGRFAYESGLNAVVQMAGDRYPFSAPFINEGAE
WIKGQGVSNTIKGFLNRNWDYLFTLSPTDVSNRGTRQ"
gene 488676..488948
/locus_tag="RBRH_03291"
/db_xref="GeneID:9988016"
CDS 488676..488948
/locus_tag="RBRH_03291"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028177.1"
/db_xref="GI:312795255"
/db_xref="GeneID:9988016"
/translation="MKWIEDGNFTPRVRAAFVIGGVTLWIGSLAWVIPPRWLRLIAFF
IGFAIMLIGGITSRSHSLGVKPFGNSYHKARKSYKEKGDTETDRIN"
misc_feature 488742..488936
/locus_tag="RBRH_03291"
/note="RNA recognition motif (RRM) superfamily; Region:
RRM_SF; cl17169"
/db_xref="CDD:247723"
gene 489180..489383
/locus_tag="RBRH_04041"
/db_xref="GeneID:9987501"
CDS 489180..489383
/locus_tag="RBRH_04041"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028178.1"
/db_xref="GI:312795256"
/db_xref="GeneID:9987501"
/translation="MPKEQIADTATALSTAAGRFGVTTGAIAAVPSLYAPGATTLTLG
AEMVGLGASAVEQIVSRIQLRLV"
gene 489865..489993
/locus_tag="RBRH_03290"
/db_xref="GeneID:9988015"
CDS 489865..489993
/locus_tag="RBRH_03290"
/codon_start=1
/transl_table=11
/product="Hemolysin"
/protein_id="YP_004028179.1"
/db_xref="GI:312795257"
/db_xref="GeneID:9988015"
/translation="MYAKRYGLSTEQALEKLTLQANLQVQNGSSGGWNLRAHEFLT"
gene 490003..490668
/locus_tag="RBRH_03289"
/db_xref="GeneID:9987500"
CDS 490003..490668
/locus_tag="RBRH_03289"
/codon_start=1
/transl_table=11
/product="Hemolysin"
/protein_id="YP_004028180.1"
/db_xref="GI:312795258"
/db_xref="GeneID:9987500"
/translation="MLPAEGDSGPGYMFYATPAQKADPSMYAGHHPSGLGLNKPTSEA
INASVNHDAASREVIAKQTLGAAAGAGAIVLAPKVAMAAGLGAGYDYAGDVISRAMGL
SNGEPSAGKSLVVGGVAGVTAPFFLPLSTLGGSAVGKIVVGVYNSVLAGTGAFAGTAI
TNSNSSPDLSGGIGAGIAAAGEFTRYIVPGQLGASLGYIFQIFPGPMQAAIEKEKNKG
EKN"
gene 490668..490916
/locus_tag="RBRH_04040"
/db_xref="GeneID:9987499"
CDS 490668..490916
/locus_tag="RBRH_04040"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028181.1"
/db_xref="GI:312795259"
/db_xref="GeneID:9987499"
/translation="MSYLMKRRKLYRRFAFGYLGILGMILVPLLFSIIQGAGWKPVLT
GVPGYLTFFFAVSWQFVKELRALRREEQEAENSKKKDE"
gene 490961..491683
/locus_tag="RBRH_03288"
/db_xref="GeneID:9988014"
CDS 490961..491683
/locus_tag="RBRH_03288"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028182.1"
/db_xref="GI:312795260"
/db_xref="GeneID:9988014"
/translation="MHQDASSRKDERKRIKRNIAPAYAAAHAGMTVGEATDRLAVQLL
RQVDTAAASQGGWDQDASNYLNAYAAAHPGETIGKDQWGNAVPLFGIAAGYQRNDSTI
FSANPQTTNPPLQLGLGAGGGYFAGLGQGLADTVSHPLDTLWGGIKGAYGLIMDPQGT
AQQMQATRAVVVQVGEGNFKPSGEQVGQQLGATVIGTAVGIGAGKAATTIKGKAAQVA
DSHSTVQGENMPQTQQQGPTVL"
gene 491686..492057
/locus_tag="RBRH_04039"
/db_xref="GeneID:9987498"
CDS 491686..492057
/locus_tag="RBRH_04039"
/codon_start=1
/transl_table=11
/product="Hemolysin"
/protein_id="YP_004028183.1"
/db_xref="GI:312795261"
/db_xref="GeneID:9987498"
/translation="MATYKPLKNQLVNKNIANIAAADSRLAVVINESRKGNVNFSIGR
GTVNEPDYLGKLWVGDGAKKTSDGSGWISADGTRVYRPPVKKVSPYAVTSIQANFEIY
RINAVTGQRVKIGNGHLNVID"
gene 492148..492414
/locus_tag="RBRH_03287"
/db_xref="GeneID:9988013"
CDS 492148..492414
/locus_tag="RBRH_03287"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028184.1"
/db_xref="GI:312795262"
/db_xref="GeneID:9988013"
/translation="MNLHLCIGLTDKLGSDNFELYVCTPEWLNKAIWEPRWGRHLLIV
REYDLLLIEEFIRSYIEKCDGQDWNAIVAKLARMFAWEFEDYQA"
gene 492585..493109
/locus_tag="RBRH_03286"
/db_xref="GeneID:9987497"
CDS 492585..493109
/locus_tag="RBRH_03286"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028185.1"
/db_xref="GI:312795263"
/db_xref="GeneID:9987497"
/translation="MDATAASQGGGNQDASNYLNAYAAAHPGETIGKDQWGNAVPLFG
AAAGYQRNDSTIFSAAPQTTNQPPQLGLGAVGGYFAGMGQGLADTIGHPLDTLGGGVK
GAYGLITDPQDTAQQMQEATRAVVVQAGEGNFKPSGEQVGPAGWFDSCRYSGRCRDWE
SSCSDQGQSYPNCE"
gene 493592..493699
/locus_tag="RBRH_03285"
/db_xref="GeneID:9987496"
CDS 493592..493699
/locus_tag="RBRH_03285"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028186.1"
/db_xref="GI:312795264"
/db_xref="GeneID:9987496"
/translation="MEFTAIFVGSSKSEWGLMEMKSILQKLQKSWQIFL"
gene 493755..493874
/locus_tag="RBRH_03284"
/db_xref="GeneID:9987495"
CDS 493755..493874
/locus_tag="RBRH_03284"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028187.1"
/db_xref="GI:312795265"
/db_xref="GeneID:9987495"
/translation="MHQDANPRKEERKRIERDIPPAYAAAHAGMTVKEAPSRS"
gene 493986..494144
/locus_tag="RBRH_03283"
/db_xref="GeneID:9987494"
CDS 493986..494144
/locus_tag="RBRH_03283"
/codon_start=1
/transl_table=11
/product="transposase"
/protein_id="YP_004028188.1"
/db_xref="GI:312795266"
/db_xref="GeneID:9987494"
/translation="MGPKTPVPEEDFFRQPLREQINLKHPLVRLADLIDWNRLSTAMS
ASFVSSAN"
misc_feature <494013..494102
/locus_tag="RBRH_03283"
/note="Glycogen synthase; Region: Glycogen_syn; pfam05693"
/db_xref="CDD:203307"
gene 494318..494821
/locus_tag="RBRH_03282"
/db_xref="GeneID:9987493"
CDS 494318..494821
/locus_tag="RBRH_03282"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028189.1"
/db_xref="GI:312795267"
/db_xref="GeneID:9987493"
/translation="MKNLNFEFLRWMPCASYADMEAQGSKVLVIDTLKTDDTSRWGYF
YTPNGAHINIGYADVGLIPQAVAIDGRVIVGISERLVGYHLFNNALYFSYRMPFIFHE
FIEIGDSLLIVRDEMGFVGIAHDGAELWKFCTEGVISNFKVGSYNISGETVDGEGFTF
KLPIDDR"
gene 494893..495357
/locus_tag="RBRH_03281"
/db_xref="GeneID:9987492"
CDS 494893..495357
/locus_tag="RBRH_03281"
/codon_start=1
/transl_table=11
/product="Hemolysin"
/protein_id="YP_004028190.1"
/db_xref="GI:312795268"
/db_xref="GeneID:9987492"
/translation="MHPQARKWISDREVVYAKRYGLTAEQAREELTIQANLQVQNGAP
GEWSQRAYKFLEQAHGMLPADGESGLGYMFYATPAQKADPSMYAEHYPSGVGLNAPSP
EVINASVNRDAASREVIAKQTLGAASGAAAIAEGGPVAALPRAPIRNRSSSI"
gene 495396..496145
/locus_tag="RBRH_03280"
/db_xref="GeneID:9987491"
CDS 495396..496145
/locus_tag="RBRH_03280"
/codon_start=1
/transl_table=11
/product="Hemolysin"
/protein_id="YP_004028191.1"
/db_xref="GI:312795269"
/db_xref="GeneID:9987491"
/translation="MACRARGLAGGGIGGGLLGAVHSGTGSLVSALLANKLDAVSRQI
ADQKPTGNADLDKTLGNIVANAMSTVAGGVVGGAQGAQAAYNVDRFNRQLDLQEKALA
QQLAEKSGGKYSQQQIEDQMRQMSMTDGGPIYAGSPDILIGDQRPTDAQAKWIYGGKT
ADGNPILTQATVANDTEYIFLCTFFFCGLPCRSSEGRVSCRLVIIFLCVRMSYRATGS
ATFTVHAAYSSSNFSYVLRCDRLWGIRNGRA"
gene complement(496494..497156)
/locus_tag="RBRH_03279"
/db_xref="GeneID:9987490"
CDS complement(496494..497156)
/locus_tag="RBRH_03279"
/EC_number="2.7.4.3"
/EC_number="2.7.4.6"
/codon_start=1
/transl_table=11
/product="adenylate kinase / Nucleoside-diphosphate
kinase"
/protein_id="YP_004028192.1"
/db_xref="GI:312795270"
/db_xref="GeneID:9987490"
/translation="MRLILLGAPGAGKGTQANFIKDKFAIPQISTGDMLRAAVKAGTP
LGVEAKRYMDAGELVPDTLIIGLVKERLQQADCKNGYLFDGFPRTIPQADAMKQAGVA
IDYVLEIDVPFNEIIERMSGRRTHPASGRTYHIKFNPPKVDMVDDVTGEPLVQRDDDK
EETVRKRLDVYVAQTCPLIDYYMQWAQRGDENGLKAPQYRKISGLGTVEEIRQRVFDA
LQ"
misc_feature complement(496497..497156)
/locus_tag="RBRH_03279"
/note="adenylate kinase; Reviewed; Region: adk; PRK00279"
/db_xref="CDD:178957"
misc_feature complement(496524..497153)
/locus_tag="RBRH_03279"
/note="Adenylate kinase (ADK) catalyzes the reversible
phosphoryl transfer from adenosine triphosphates (ATP) to
adenosine monophosphates (AMP) and to yield adenosine
diphosphates (ADP). This enzyme is required for the
biosynthesis of ADP and is essential for...; Region: ADK;
cd01428"
/db_xref="CDD:30189"
misc_feature complement(order(496881..496883,496893..496898,
496902..496907,496980..496982,497049..497051,
497064..497066))
/locus_tag="RBRH_03279"
/note="AMP-binding site [chemical binding]; other site"
/db_xref="CDD:30189"
misc_feature complement(order(496644..496646,496656..496658,
496788..496790,496893..496895,496905..496907,
497049..497051))
/locus_tag="RBRH_03279"
/note="ATP-AMP (Ap5A)-binding site [chemical binding];
other site"
/db_xref="CDD:30189"
gene complement(497361..498233)
/locus_tag="RBRH_03278"
/db_xref="GeneID:9987489"
CDS complement(497361..498233)
/locus_tag="RBRH_03278"
/EC_number="2.7.7.38"
/codon_start=1
/transl_table=11
/product="3-deoxy-manno-octulosonate cytidylyltransferase"
/protein_id="YP_004028193.1"
/db_xref="GI:312795271"
/db_xref="GeneID:9987489"
/translation="MRRARRSKARRSSRPATNLMHAAVPFIVVVPARLASTRLPGKPL
ADLAGKPMVVHVAEQARASGASRVLIATDAEVVLNACQAHGIEALLTRTDHPTGTDRL
AEVVQACRLPDDALVVNVQGDEPLIEPRLIAGVAAHLAANPDCAIATAAHPITEPAQV
FNPNIVKVVLDARGIALYFSRAPIPWSRDAYQPQWSPEGGAAPVVDIARLPASSTTVH
RHIGLYAYRAGFLRRYPNLSQAPIEIAEALEQLRAMWHGERIAVLLTPHAPPPGVDTP
ADLARVRAILAQRG"
misc_feature complement(497379..498158)
/locus_tag="RBRH_03278"
/note="CMP-KDO synthetase catalyzes the activation of KDO
which is an essential component of the lipopolysaccharide;
Region: CMP-KDO-Synthetase; cd02517"
/db_xref="CDD:133010"
misc_feature complement(order(497865..497867,497871..497873,
497940..497942,498021..498023,498135..498143))
/locus_tag="RBRH_03278"
/note="Ligand binding site; other site"
/db_xref="CDD:133010"
misc_feature complement(order(497463..497474,497493..497501,
497508..497513,497586..497588,497676..497696,
497700..497705,497721..497729,497745..497747,
497796..497798))
/locus_tag="RBRH_03278"
/note="oligomer interface; other site"
/db_xref="CDD:133010"
gene complement(498181..498375)
/locus_tag="RBRH_03277"
/db_xref="GeneID:9987488"
CDS complement(498181..498375)
/locus_tag="RBRH_03277"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028194.1"
/db_xref="GI:312795272"
/db_xref="GeneID:9987488"
/translation="MDARLLEILVCPLCKGPLHHDRNAQELICHADKLAYPIRDGIPV
MLADEARQTVEGTPIEPAGN"
misc_feature complement(498199..498375)
/locus_tag="RBRH_03277"
/note="Uncharacterized conserved protein [Function
unknown]; Region: COG2835"
/db_xref="CDD:32663"
gene complement(498528..499388)
/locus_tag="RBRH_03276"
/db_xref="GeneID:9987487"
CDS complement(498528..499388)
/locus_tag="RBRH_03276"
/EC_number="2.7.1.130"
/codon_start=1
/transl_table=11
/product="tetraacyldisaccharide 4'-kinase"
/protein_id="YP_004028195.1"
/db_xref="GI:312795273"
/db_xref="GeneID:9987487"
/translation="MPIPLSRAIIARLEHVFSREWQRRGVLAYTLWPLSQLFAAVCAL
RRLAYARGWRKTWHVSVPVVVVGNVTVGGTGKTPTVIALIEALRDAGFTPGVVSRGYG
ARIVQPTAVSPASSPALAGDEPLLIARRTGVPVWVCPDRVAAARALVQAHREVDVIVS
DDGLQHYRLARDIELVVFDHRLGGNGFLLPAGTVARTAESRPRRNVDQQPLRAQLATM
ASNFRADAAARRRMALGSSAPAPAAGAVCRRARAGRCRHRRAGAFLRDTAGERPRARN
TRAARPLSFR"
misc_feature complement(<498813..499328)
/locus_tag="RBRH_03276"
/note="tetraacyldisaccharide 4'-kinase; Reviewed; Region:
lpxK; PRK00652"
/db_xref="CDD:179082"
gene 499836..501212
/locus_tag="RBRH_03275"
/db_xref="GeneID:9987486"
CDS 499836..501212
/locus_tag="RBRH_03275"
/EC_number="3.1.11.6"
/codon_start=1
/transl_table=11
/product="exodeoxyribonuclease VII large subunit"
/protein_id="YP_004028196.1"
/db_xref="GI:312795274"
/db_xref="GeneID:9987486"
/translation="MTAEFSPPAPFVGGDAVIPVSALNRAIGTLLERAFALAWIAGEV
SNFTRAASGHWYFSIKDDCAQIRCVMFRGRAQYAQFTPREGDRIEVRATVTMYEPRGE
LQLNVEAVRRTGQGRLYEAFLKLKAQLEAEGLFAAERKRVLPSHPRAIGIVTSLQAAA
LRDVLTTLARRAPHVPIIVYPAPVQGAEAAARVAAMIVTANRRAEVDVLIVCRGGGSI
EDLWAFNDESLARAIASSTLPIVSGVGHETDFTIADFAADVRAPTPTAAAELVSAQRT
MLLRELDHRHAALARGFGRMMERRAQQLDWLARRLVSPSERIARQRQHLRQLSLRLCS
AGARPVRDARARLTMVQLRWRRSQPDTERAAERVQRLGQRLRDALHRQHERRRAQVSE
LAARTELLSPRRTLERGYAALIDPHSGAAVRAPDALNPGGRVTVHLAHGSADLGIAHV
QPRLDEEF"
misc_feature 499878..501167
/locus_tag="RBRH_03275"
/note="exodeoxyribonuclease VII large subunit; Reviewed;
Region: xseA; PRK00286"
/db_xref="CDD:178962"
misc_feature 499950..500177
/locus_tag="RBRH_03275"
/note="ExoVII_LU_OBF: A subfamily of OB folds
corresponding to the N-terminal OB-fold domain of
Escherichia coli exodeoxyribonuclease VII (ExoVII) large
subunit. E. coli ExoVII is composed of two non-identical
subunits. E. coli ExoVII is a...; Region: ExoVII_LU_OBF;
cd04489"
/db_xref="CDD:72961"
misc_feature order(499950..499952,500094..500096,500100..500102,
500106..500108,500166..500168)
/locus_tag="RBRH_03275"
/note="generic binding surface II; other site"
/db_xref="CDD:72961"
misc_feature order(499965..499973,500001..500012,500016..500018,
500034..500042,500046..500048,500091..500093,
500112..500120,500145..500153)
/locus_tag="RBRH_03275"
/note="generic binding surface I; other site"
/db_xref="CDD:72961"
gene complement(501209..501385)
/locus_tag="RBRH_04038"
/db_xref="GeneID:9987485"
CDS complement(501209..501385)
/locus_tag="RBRH_04038"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028197.1"
/db_xref="GI:312795275"
/db_xref="GeneID:9987485"
/translation="MSQNCSAVRHPAQRSALISPAPRAGDTHAPDTHAPAYRFRARLR
ATHPPIGQAARAPP"
gene 501463..502104
/locus_tag="RBRH_04037"
/db_xref="GeneID:9988012"
CDS 501463..502104
/locus_tag="RBRH_04037"
/EC_number="1.15.1.1"
/codon_start=1
/transl_table=11
/product="Superoxide dismutase"
/protein_id="YP_004028198.1"
/db_xref="GI:312795276"
/db_xref="GeneID:9988012"
/translation="MLGSMTYPGPQFVIKEACTMAQHTLPPLPFAKNALAPHISEETL
EFHYGKHHQAYVTNLNNLIPGTEFENLSLEEIVKRSSGGIFNNAAQVWNHTFFWNSLS
PQGGGAPTGKLGDAINAKWGSYDAFKEAFTKVAIGTFGSGWAWLVKKADGSLDIVSTS
NAATPLTTDATPLLTLDVWEHAYYIDYRNARPKFVDAFWNVVNWDFAAKNFGV"
misc_feature 501529..501768
/locus_tag="RBRH_04037"
/note="Iron/manganese superoxide dismutases, alpha-hairpin
domain; Region: Sod_Fe_N; pfam00081"
/db_xref="CDD:200985"
misc_feature 501535..502095
/locus_tag="RBRH_04037"
/note="superoxide dismutase; Provisional; Region:
PRK10543"
/db_xref="CDD:182534"
misc_feature 501781..502095
/locus_tag="RBRH_04037"
/note="Iron/manganese superoxide dismutases, C-terminal
domain; Region: Sod_Fe_C; pfam02777"
/db_xref="CDD:202388"
gene 502101..502301
/locus_tag="RBRH_04036"
/db_xref="GeneID:9988011"
CDS 502101..502301
/locus_tag="RBRH_04036"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028199.1"
/db_xref="GI:312795277"
/db_xref="GeneID:9988011"
/translation="MKLARGIAARVPATRRSYASDAPSQPMSVHSTIRWPATHTAIDV
VRQSCASLIDRYTAACTPPCAA"
gene complement(502298..503854)
/locus_tag="RBRH_00954"
/db_xref="GeneID:9988010"
CDS complement(502298..503854)
/locus_tag="RBRH_00954"
/codon_start=1
/transl_table=11
/product="multidrug resistance protein B"
/protein_id="YP_004028200.1"
/db_xref="GI:312795278"
/db_xref="GeneID:9988010"
/translation="MRRPMRGRGALSRSGASDGPKPPRIAACVAKPSDLPMSGTPSRP
THHAVAAERKLTIMLWLVATGFFMQALDTTIVNTALPAMARSLGESALRMQSVVIAYS
LTMALMIPVSGFLADRFGTRRVFFSAILIFTLGSLMCANASALWQLVASRVVQGVGGA
MLLPVGRLAVLRSFPRERYLPALSFVAIPGLVGPLIGPTLGGWLTDVASWHWVFLINV
PVGLAGCIATALFMLGEPLDKVGRFDVKGYLLLAAAILALTLALDGLAELRLAHALVL
VLLVLAFACLTAYALHATRSPHPLFSLELFHIHTFSVGLLGNLFARIGSGAMPYLLPL
LLQVSLGYTPFHAGLMMLPVAAAGMASKRIVTTLIMRHGYRRVLLANTVLLGATMASF
ALMSPEQPLWIRLVQLAIFGSVNSMQFTAMNTLTLKDLGREGASSGNSLFSLVQMLSM
SLGVTIAGALLATFTALFGHNAPSQTLPAFHATFVCVGVITALSAWIFGQLAPDIRSP
GRHDGDAETL"
misc_feature complement(502334..503680)
/locus_tag="RBRH_00954"
/note="putative transporter; Provisional; Region:
PRK10504"
/db_xref="CDD:182502"
misc_feature complement(<503159..503680)
/locus_tag="RBRH_00954"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature complement(order(503273..503275,503291..503296,
503303..503308,503342..503344,503351..503356,
503363..503368,503375..503380,503516..503521,
503525..503530,503540..503542,503549..503554,
503561..503563,503612..503617,503621..503629,
503636..503638))
/locus_tag="RBRH_00954"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
gene complement(503784..503918)
/locus_tag="RBRH_00953"
/db_xref="GeneID:9985724"
CDS complement(503784..503918)
/locus_tag="RBRH_00953"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028201.1"
/db_xref="GI:312795279"
/db_xref="GeneID:9985724"
/translation="MRSENRLGCPKSEVRGSVTLTDAQADARARRFIEKRRERRAKAT
"
gene complement(503858..504022)
/locus_tag="RBRH_00952"
/db_xref="GeneID:9985723"
CDS complement(503858..504022)
/locus_tag="RBRH_00952"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028202.1"
/db_xref="GI:312795280"
/db_xref="GeneID:9985723"
/translation="MAAYGRSGCERTCVFATHDGTPFNANEIVATFEQLCGPKTGSAA
QNPKCAEASR"
misc_feature complement(<503891..503971)
/locus_tag="RBRH_00952"
/note="The substrate-binding domain of an ABC-type
nickel/oligopeptide-like import system contains the type 2
periplasmic binding fold; Region:
PBP2_NikA_DppA_OppA_like; cl01709"
/db_xref="CDD:212263"
gene 503971..504141
/locus_tag="RBRH_04035"
/db_xref="GeneID:9985722"
CDS 503971..504141
/locus_tag="RBRH_04035"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028203.1"
/db_xref="GI:312795281"
/db_xref="GeneID:9985722"
/translation="MSRKRTFFRSLNVHTLPFIDRVVLQRVATRRGALHARQHHGAAR
GAWVGLSVPTSR"
gene complement(504119..506350)
/locus_tag="RBRH_00951"
/db_xref="GeneID:9988009"
CDS complement(504119..506350)
/locus_tag="RBRH_00951"
/codon_start=1
/transl_table=11
/product="protein translation Elongation Factor G (EF-G)"
/protein_id="YP_004028204.1"
/db_xref="GI:312795282"
/db_xref="GeneID:9988009"
/translation="MSVGARATERPRRPFFPVRQADAVSDACRTGHPIAKKEIQVARK
TPIERYRNIGISAHIDAGKTTTTERILFYTGVSHKMGEVHEGAATMDWMEQEQERGIT
ITSAATTAFWKGMAGNYPEHRINIIDTPGHVDFTIEVERSMRVLDGACMVYDSVGGVQ
PQSETVWRQANKYNVPRIAFVNKMDRVGADFFRVQRQIGERLRGVAVPIQIPIGAEDH
FQGVIDLVKMKAIIWDEDSLGVKFEYRDIPTDLAGLAQQWRDKMVEAAAEASEALLEK
YLEDHHSLTEQEIKEALRKRTIANEIVPMLCGSAFKNKGVQAMLDAVIDYLPSPVDVP
AILGHTPDDEQAERHPADDEPFSALAFKIMTDPFVGQLIFFRVYSGVVSSGDTVLNPT
KSKRERIGRILQMHANERTEIKEVRAGDIAAAVGLKEASTGDTLCDPNNVIILERMIF
PEPVISQAVEPKTKADQEKMGIALNRLAQEDPSFRVKTDEESGQTIISGMGELHLEIL
VDRMKREFNVEASVGRPQVAYRETVRNAVQDVEGKFVKQSGGRGQYGHAVIALEPQPP
GKGYEFVDAIKGGVIPREFIPAVDRGIREAMQAGVLAGYPVVDIKVTLTFGSYHDVDS
NENAFRMAGSIAFKEGMRRARPVLLEPVVAVEVETPEDFMGNVMGDLSSRRGIVQGME
DIAGGGGKVVRAEVPLAEMFGYSTTLRSLTQGRATYTMEFKHYAESPQHVADAVINAK
SAR"
misc_feature complement(504125..506227)
/locus_tag="RBRH_00951"
/note="elongation factor G; Reviewed; Region: PRK00007"
/db_xref="CDD:178789"
misc_feature complement(505361..506197)
/locus_tag="RBRH_00951"
/note="Elongation factor G (EF-G) family involved in both
the elongation and ribosome recycling phases of protein
synthesis; Region: EF-G; cd01886"
/db_xref="CDD:206673"
misc_feature complement(506159..506182)
/locus_tag="RBRH_00951"
/note="G1 box; other site"
/db_xref="CDD:206673"
misc_feature complement(order(505760..505762,505772..505774,
505880..505885,505952..505957,506030..506035,
506135..506140,506147..506149,506156..506161,
506171..506173,506177..506179))
/locus_tag="RBRH_00951"
/note="putative GEF interaction site [polypeptide
binding]; other site"
/db_xref="CDD:206673"
misc_feature complement(order(505418..505426,505796..505798,
505802..505807,506156..506167,506171..506173))
/locus_tag="RBRH_00951"
/note="GTP/Mg2+ binding site [chemical binding]; other
site"
/db_xref="CDD:206673"
misc_feature complement(506033..506092)
/locus_tag="RBRH_00951"
/note="Switch I region; other site"
/db_xref="CDD:206673"
misc_feature complement(506045..506047)
/locus_tag="RBRH_00951"
/note="G2 box; other site"
/db_xref="CDD:206673"
misc_feature complement(505958..505969)
/locus_tag="RBRH_00951"
/note="G3 box; other site"
/db_xref="CDD:206673"
misc_feature complement(505907..505963)
/locus_tag="RBRH_00951"
/note="Switch II region; other site"
/db_xref="CDD:206673"
misc_feature complement(505796..505807)
/locus_tag="RBRH_00951"
/note="G4 box; other site"
/db_xref="CDD:206673"
misc_feature complement(505418..505426)
/locus_tag="RBRH_00951"
/note="G5 box; other site"
/db_xref="CDD:206673"
misc_feature complement(505037..505285)
/locus_tag="RBRH_00951"
/note="EFG_mtEFG_II: this subfamily represents the domain
II of elongation factor G (EF-G) in bacteria and, the
C-terminus of mitochondrial Elongation factor G1 (mtEFG1)
and G2 (mtEFG2)_like proteins found in eukaryotes. During
the process of peptide synthesis...; Region: EFG_mtEFG_II;
cd04088"
/db_xref="CDD:58095"
misc_feature complement(504416..504766)
/locus_tag="RBRH_00951"
/note="EFG_mtEFG1_IV: domains similar to domain IV of the
bacterial translational elongation factor (EF) EF-G.
Included in this group is a domain of mitochondrial
Elongation factor G1 (mtEFG1) proteins homologous to
domain IV of EF-G. Eukaryotic cells harbor 2...; Region:
EFG_mtEFG1_IV; cd01434"
/db_xref="CDD:58274"
misc_feature complement(504164..504367)
/locus_tag="RBRH_00951"
/note="EFG_mtEFG_C: domains similar to the C-terminal
domain of the bacterial translational elongation factor
(EF) EF-G. Included in this group is the C-terminus of
mitochondrial Elongation factor G1 (mtEFG1) and G2
(mtEFG2) proteins. Eukaryotic cells harbor 2...; Region:
EFG_mtEFG_C; cd03713"
/db_xref="CDD:58065"
gene complement(506471..507166)
/locus_tag="RBRH_00950"
/db_xref="GeneID:9985721"
CDS complement(506471..507166)
/locus_tag="RBRH_00950"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028205.1"
/db_xref="GI:312795283"
/db_xref="GeneID:9985721"
/translation="MRRYSKAGCRKAICLFVGLYYPAIRVTCAYSYYEESAVVVSVRS
ALSVSRLFRVPARHARPASPRLCINTSRPAPLARVAAALVAGVTLALGTCGALAQPLP
AALKRPEQFPRASLTIGMYVVDAAIAANPADREQGLMFRKSLAPNEGMLFVFDENAIH
CFWMKNTPLPLSIAFIRADGTITDLDEMQAQTQNNHCPAHNGVYALEMSKGWFASKGI
KPGMRVLGLPPAR"
misc_feature complement(506495..506800)
/locus_tag="RBRH_00950"
/note="Uncharacterized ACR, COG1430; Region: DUF192;
pfam02643"
/db_xref="CDD:190374"
gene complement(507210..507413)
/locus_tag="RBRH_00949"
/db_xref="GeneID:9985720"
CDS complement(507210..507413)
/locus_tag="RBRH_00949"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028206.1"
/db_xref="GI:312795284"
/db_xref="GeneID:9985720"
/translation="MRKNNMNKLIAALVAGLFATAAFAQSSAPEAASAPAAASKTEAH
KKAHKSHKKAAKKAAAASEAASN"
gene complement(507764..508333)
/locus_tag="RBRH_00948"
/db_xref="GeneID:9985719"
CDS complement(507764..508333)
/locus_tag="RBRH_00948"
/EC_number="4.2.1.70"
/codon_start=1
/transl_table=11
/product="ribosomal large subunit pseudouridine synthase
E"
/protein_id="YP_004028207.1"
/db_xref="GI:312795285"
/db_xref="GeneID:9985719"
/translation="MRLIALNKPYGTICQFSAHETRASLATWVNVPDVYPAGRLDADS
EGLLLLTDDGALQARIAEPRHKLVKRYWAQLDGAAPASALAALERGVDLGDYVSRPCR
ARFIEPPSGLWQRDPPVRYRAAIPTTWIELALGEGRNRQVRRMTAAVGFPTLRLIRVG
IGALDLFALGLAPGQWRALPPSAPWHGTR"
misc_feature complement(507827..508327)
/locus_tag="RBRH_00948"
/note="Pseudouridine synthases catalyze the isomerization
of specific uridines in an RNA molecule to pseudouridines
(5-ribosyluracil, psi); Region: PseudoU_synth; cl00130"
/db_xref="CDD:211430"
misc_feature complement(507791..508225)
/locus_tag="RBRH_00948"
/note="pseudouridine synthase; Region: TIGR00093"
/db_xref="CDD:188020"
misc_feature complement(order(507905..507907,508211..508222))
/locus_tag="RBRH_00948"
/note="active site"
/db_xref="CDD:211324"
gene complement(508415..508609)
/locus_tag="RBRH_04034"
/db_xref="GeneID:9985718"
CDS complement(508415..508609)
/locus_tag="RBRH_04034"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028208.1"
/db_xref="GI:312795286"
/db_xref="GeneID:9985718"
/translation="MFDSNGMDGLKVCCAATRQHALIPASPAKAARGGLTETRESLVA
KRYSSAGKTPRHRVDALSLI"
gene 508503..509861
/locus_tag="RBRH_00946"
/db_xref="GeneID:9988008"
CDS 508503..509861
/locus_tag="RBRH_00946"
/EC_number="1.1.1.42"
/codon_start=1
/transl_table=11
/product="isocitrate dehydrogenase"
/protein_id="YP_004028209.1"
/db_xref="GI:312795287"
/db_xref="GeneID:9988008"
/translation="MRPPRAALAGDAGINACWRVAAQHTFSPSIPLESNMPYQHIKVP
AGEKITVNQDFSLNVPDQPIIPYIEGDGIGFDITPVMVKVVDAAVEKAYGGKKKIAWM
EIFAGEKATKVYGPDVWLPEETLQILKEYVVSIKGPLTTPVGGGIRSLNVALRQELDL
YVCLRPVQYFKGVPSPVREPEKTNMVIFRENSEDIYAGIEWAAESEQAKKVIKFLREE
MGVKKIRFPETSGLGIKPVSREGTQRLVRKAIQYALDNNRKSVTLVHKGNIMKFTEGA
FRDYGYALAQKEFGAQLIDGGPWMKIKHPKSGAEIVIKDVIADAFLQQILLRPAEYDV
IATLNLNGDYISDALAAQVGGIGIAPGANLSDSVAMFEATHGTAPKYAGKDYVNPGSE
ILSAEMMLRHLGWTEAADVIISAMEKSILQKRVTYDFARLMEGATQVSCSGFGQVLIE
NM"
misc_feature 508614..509855
/locus_tag="RBRH_00946"
/note="isocitrate dehydrogenase; Validated; Region:
PRK07362"
/db_xref="CDD:180944"
misc_feature 508632..509858
/locus_tag="RBRH_00946"
/note="isocitrate dehydrogenase; Reviewed; Region:
PRK07006"
/db_xref="CDD:180792"
gene 510070..510516
/locus_tag="RBRH_00945"
/db_xref="GeneID:9985717"
CDS 510070..510516
/locus_tag="RBRH_00945"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028210.1"
/db_xref="GI:312795288"
/db_xref="GeneID:9985717"
/translation="MATDNLDPSDFTIFTVVSATLVRCCPMSHRRTQKLTAWLGLTAI
WLIVVMPLASQWLSHAGRGVDTVLCSAATTGERASAHGSAHVGGHLDACGYCSLLAHS
PAIGAPQVATLMLQRQRAATLPVIEGVPRPTSRHLVSYPRAPPGTV"
misc_feature 510175..510504
/locus_tag="RBRH_00945"
/note="Protein of unknown function (DUF2946); Region:
DUF2946; pfam11162"
/db_xref="CDD:204602"
gene 510479..512749
/locus_tag="RBRH_00944"
/db_xref="GeneID:9985716"
CDS 510479..512749
/locus_tag="RBRH_00944"
/codon_start=1
/transl_table=11
/product="outer membrane protein NosA"
/protein_id="YP_004028211.1"
/db_xref="GI:312795289"
/db_xref="GeneID:9985716"
/translation="MSLTLGPPQARFDGDFFAHSVTDACRTGHSTAGLEGMPWVVCMK
FSFLDQAASRRLINAHLVLERNRCRRWAPSVFAAASLLGTVSAHAQADASPPDAPPAG
AASVLVPIEVIANAPKHPLVVVTDPKQPRQPLPASDGADYLKTVPGFSAIRSGGTNAD
AVFRGMSGSRLSLLSNGAPMLGACPGRMDAPTSYIAPESYDKVTVVKGPQSVLYGPGA
SAGTVLFERTTRRFDAPGMRFDGSLVGGSFGRNDQNVDLSAGVREGYARVIANHAHQQ
DYRDGNGNTVPSQWDKWNVDTALGWTPNEHTRIEASAGTGDGYARYAGRFKDGARFRR
ESYGLRAERSHLGEVLDRVEAQVYYNDFDHVMDNFTLRSPAGGGRSMPMASEVRRRTF
GARSAATLRFTDQFKLVAGVDGQHHALDNRSLQQAAANGNGPWKPSATLWSIGGFGEL
TWYATQAERMVTGLRMDRAAARDRRVNVGSGAMQAPNPTANVQRERTLPSGFVRYERD
LATLPAMWYVGIGHAERFPDYWELFSPKRGPEGSINAFSSLCPEKTTQLDIGAQYSGE
RVDAWVSAYAGSVRDFILFDYVSEPMGPASRATQVGARILGGELGATWRATPAWRFET
SLAYAWGRNNDTGGPLPQIPPLEARVGANYQHGTWSVGALWRVVAAQRRYASNEGNVV
GKDFGPSAGFGVVSLHAQYAFGKAATLTLGVDNLFDNAYTEHLNLAGNAGFGYSANSP
VMESGRTVWLRLGVKL"
misc_feature 510845..512743
/locus_tag="RBRH_00944"
/note="TonB-dependent copper receptor; Region:
TonB-copper; TIGR01778"
/db_xref="CDD:162530"
misc_feature 510881..512743
/locus_tag="RBRH_00944"
/note="TonB dependent/Ligand-Gated channels are created by
a monomeric 22 strand (22,24) anti-parallel beta-barrel.
Ligands apparently bind to the large extracellular loops.
The N-terminal 150-200 residues form a plug from the
periplasmic end of barrel; Region: ligand_gated_channel;
cd01347"
/db_xref="CDD:73259"
misc_feature order(510899..510928,510962..510979,510998..511003,
511004..511018,511067..511099,511133..511156,
511160..511162)
/locus_tag="RBRH_00944"
/note="N-terminal plug; other site"
/db_xref="CDD:73259"
misc_feature order(511568..511570,511631..511633)
/locus_tag="RBRH_00944"
/note="ligand-binding site [chemical binding]; other site"
/db_xref="CDD:73259"
gene complement(512820..513116)
/locus_tag="RBRH_00943"
/db_xref="GeneID:9985715"
CDS complement(512820..513116)
/locus_tag="RBRH_00943"
/codon_start=1
/transl_table=11
/product="Cold shock protein"
/protein_id="YP_004028212.1"
/db_xref="GI:312795290"
/db_xref="GeneID:9985715"
/translation="MSLLEGSGRMGHGAFRACSCSKDESDRGSRMATGTVKWFNDAKG
YGFITPDEGGEDLFAHFSAIQMNGFKTLKEGQKVSFEVVQGPKGKQASNIQAAA"
misc_feature complement(512832..513020)
/locus_tag="RBRH_00943"
/note="Cold-Shock Protein (CSP) contains an S1-like
cold-shock domain (CSD) that is found in eukaryotes,
prokaryotes, and archaea. CSP's include the major
cold-shock proteins CspA and CspB in bacteria and the
eukaryotic gene regulatory factor Y-box protein; Region:
CSP_CDS; cd04458"
/db_xref="CDD:88424"
misc_feature complement(order(512856..512858,512943..512945,
512976..512978,513003..513005))
/locus_tag="RBRH_00943"
/note="DNA-binding site [nucleotide binding]; DNA binding
site"
/db_xref="CDD:88424"
misc_feature complement(order(512937..512948,512967..512987))
/locus_tag="RBRH_00943"
/note="RNA-binding motif; other site"
/db_xref="CDD:88424"
gene 513541..513855
/locus_tag="RBRH_00942"
/db_xref="GeneID:9985714"
CDS 513541..513855
/locus_tag="RBRH_00942"
/codon_start=1
/transl_table=11
/product="ATP-dependent Clp protease adaptor protein ClpS"
/protein_id="YP_004028213.1"
/db_xref="GI:312795291"
/db_xref="GeneID:9985714"
/translation="MAIIPDKQDGTVLERQEHKAKPPSMYRVVLLNDDFTPMEFVVMV
IQQYFNKDRDTATQIMLKVHYEGRGICGVYTRDIASTKVEQVVTHARQAGHPLQCVME
EA"
misc_feature 513541..513852
/locus_tag="RBRH_00942"
/note="ATP-dependent Clp protease adaptor protein ClpS;
Reviewed; Region: clpS; PRK00033"
/db_xref="CDD:178809"
gene 513834..516152
/locus_tag="RBRH_00941"
/db_xref="GeneID:9985713"
CDS 513834..516152
/locus_tag="RBRH_00941"
/codon_start=1
/transl_table=11
/product="ATP-dependent clp protease ATP-binding subunit
clpA"
/protein_id="YP_004028214.1"
/db_xref="GI:312795292"
/db_xref="GeneID:9985713"
/translation="MCDGGSMIAQELEVSLHMAFMEARQARHEFITVEHLLLALLDNP
TAAEVLRACAANIEDLRQNLRNFIHDNTPIVPGTDDVDTQPTLGFQRVIQRAIMHVQS
TSSGKKEVTGANVLVAIFGEKDSHAVYYLQQQGVTRLDVVNFISHGIAKTAGPDVAKA
GEPPADGDDASAQKETPLAQFTQNLNQQARDGKIDPLIGREPEVERMVQVLCRRRKNN
PLMVGEAGVGKTAIVEGLAWRIVRGEVPDILADAQVFSLDLGALLAGTKYRGDFEQRL
KTVLKELRDRPHAILFIDEIHTLIGAGAASGGTLDASNLLKPALSSGQLKCIGATTFT
EFRGIFEKDAALSRRFQKIDVTEPTVEQTVAILRGLKSRFEEHHGVKYSSGALSAAAE
LSARFITDRHLPDKAIDVIDEAGAAQRILPRSKQKKTIGKTEIEDIISKIARVPAQSV
SQDDRSKLQTLDRDLKSVVFGQDPAIDALAAAIKMARAGLGKTDKPIGAFLFSGPTGV
GKTEVARQLAFTMGIELVRFDMSEYMERHAVSRLIGAPPGYVGFDQGGLLTEAVTKKP
HCVLLLDEIEKAHPDIFNVLLQVMDHGTLTDNNGRKSDFRNVIIIMTTNAGAEAMNKA
TIGFTTRRETGDEMADIKRMFTPEFRNRLDAIISFRSLDEEIIMRVVDKFLMQLEDQL
HEKKVDALFTDALRKHLAKHGFDPLMGARPMQRLIQDTIRRALADELLFGKLMNGGRV
TVNVDDNDKVQLTFDENAAPRNPTNPETAEVE"
misc_feature 513855..516065
/locus_tag="RBRH_00941"
/note="ATP-dependent Clp protease ATP-binding subunit
clpA; Region: ClpA; TIGR02639"
/db_xref="CDD:200207"
misc_feature 513888..514037
/locus_tag="RBRH_00941"
/note="Clp amino terminal domain; Region: Clp_N;
pfam02861"
/db_xref="CDD:202433"
misc_feature 514425..514892
/locus_tag="RBRH_00941"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature 514500..514523
/locus_tag="RBRH_00941"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature order(514503..514526,514713..514715,514827..514829)
/locus_tag="RBRH_00941"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature 514701..514718
/locus_tag="RBRH_00941"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature 514878..514880
/locus_tag="RBRH_00941"
/note="arginine finger; other site"
/db_xref="CDD:99707"
misc_feature 515316..515678
/locus_tag="RBRH_00941"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature 515343..515366
/locus_tag="RBRH_00941"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature order(515346..515369,515550..515552,515676..515678)
/locus_tag="RBRH_00941"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature 515538..515555
/locus_tag="RBRH_00941"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature 515817..516059
/locus_tag="RBRH_00941"
/note="C-terminal, D2-small domain, of ClpB protein;
Region: ClpB_D2-small; pfam10431"
/db_xref="CDD:204486"
gene complement(516207..516749)
/locus_tag="RBRH_00940"
/db_xref="GeneID:9985712"
CDS complement(516207..516749)
/locus_tag="RBRH_00940"
/EC_number="3.6.1.23"
/codon_start=1
/transl_table=11
/product="deoxyuridine 5'-triphosphate
nucleotidohydrolase"
/protein_id="YP_004028215.1"
/db_xref="GI:312795293"
/db_xref="GeneID:9985712"
/translation="MLAVPSRRTAPAPRRRVITHTAMPARCSHYSLMNIDLKILDPRM
RDALPAYATAGSAGLDLRACLDEPLILQPGATALVPTGXAIHIGTPGYAALILPRSGL
GHKHGIVLGNLVGLIDSDYQGQLMISTWNRGETTFTLNPMERLAQLVVVPVAQVQFNV
VDDFSHSERGAGGFGSTGRH"
misc_feature complement(516312..516581)
/locus_tag="RBRH_00940"
/note="Trimeric dUTP diphosphatases; Region:
trimeric_dUTPase; cd07557"
/db_xref="CDD:143638"
misc_feature complement(order(516321..516323,516330..516344,
516354..516356,516360..516362,516366..516368,
516372..516374,516393..516395,516402..516404,
516420..516428,516444..516461,516465..516467,
516516..516518,516522..516527,516540..516542,
516576..516581))
/locus_tag="RBRH_00940"
/note="trimer interface [polypeptide binding]; other site"
/db_xref="CDD:143638"
misc_feature complement(order(516372..516377,516387..516389,
516396..516404,516447..516455))
/locus_tag="RBRH_00940"
/note="active site"
/db_xref="CDD:143638"
gene complement(516763..516990)
/locus_tag="RBRH_00939"
/db_xref="GeneID:9985711"
CDS complement(516763..516990)
/locus_tag="RBRH_00939"
/EC_number="1.14.-.-"
/codon_start=1
/transl_table=11
/product="luciferase-like monooxygenase"
/protein_id="YP_004028216.1"
/db_xref="GI:312795294"
/db_xref="GeneID:9985711"
/translation="MTRLSVLDQTPVIDGYSVADAIAATVELAQLAVQQQFNADELIV
LTVAASYKARLRSYELLAQAFDLAAQTHETA"
misc_feature complement(<516895..516981)
/locus_tag="RBRH_00939"
/note="luciferase family oxidoreductase, group 1; Region:
oxido_grp_1; TIGR03558"
/db_xref="CDD:211837"
misc_feature complement(516799..>516924)
/locus_tag="RBRH_00939"
/note="luciferase family oxidoreductase, group 1; Region:
oxido_grp_1; TIGR03558"
/db_xref="CDD:211837"
gene complement(517059..518300)
/locus_tag="RBRH_00938"
/db_xref="GeneID:9985710"
CDS complement(517059..518300)
/locus_tag="RBRH_00938"
/EC_number="4.1.1.36"
/EC_number="6.3.2.5"
/codon_start=1
/transl_table=11
/product="phosphopantothenoylcysteine decarboxylase /
phosphopantothenate--cysteine ligase"
/protein_id="YP_004028217.1"
/db_xref="GI:312795295"
/db_xref="GeneID:9985710"
/translation="MPAPDTRNSGRNDMDLAGKHLVLGLTGGIACYKSAELTRMLTQA
GATVQVAMTQAATQFITPVTMQALSGHPVYTSQWDARIDNNMPHIDLSRRADAIVIAP
ASTDFIAKLANGLCDDLLSTLAMARDCPLLVVPAMNRQMWQNPATQRNVAQLRADGIT
VLGPDSGPQACGEIGDGRMLEPAAVYEAIIAFFQPKKLAGQRVLITAGPTFEPIDPVR
GITNRSSGKMGFALARAAAQAGAHVHLVAGPVALATPWGVSREDVQTAQQMYDAVMAA
VADTDIFIAVAAVADWRVAQVSKHKLKKAAGQPAPPLDFIENPDILASVAALPSPPYC
VGFAAESSELGVNGEAKRRRKNVPLLIGNLGPKTFGKDDNEVVLFETTGSTPLPRADK
QSLARTLVDEIAQRVPGSLFA"
misc_feature complement(517083..518261)
/locus_tag="RBRH_00938"
/note="bifunctional phosphopantothenoylcysteine
decarboxylase/phosphopantothenate synthase; Validated;
Region: PRK05579"
/db_xref="CDD:180143"
misc_feature complement(517860..518246)
/locus_tag="RBRH_00938"
/note="Flavoprotein; Region: Flavoprotein; pfam02441"
/db_xref="CDD:202241"
misc_feature complement(517164..517709)
/locus_tag="RBRH_00938"
/note="DNA / pantothenate metabolism flavoprotein; Region:
DFP; pfam04127"
/db_xref="CDD:202899"
gene complement(518321..518827)
/locus_tag="RBRH_00937"
/db_xref="GeneID:9985709"
CDS complement(518321..518827)
/locus_tag="RBRH_00937"
/EC_number="3.4.23.36"
/codon_start=1
/transl_table=11
/product="lipoprotein signal peptidase"
/protein_id="YP_004028218.1"
/db_xref="GI:312795296"
/db_xref="GeneID:9985709"
/translation="MAKILSRNVARSATLMPWLGISLIVILLDQLSKLAVSRLFVYGD
PHPVAPCFNLMLVYNRGAAFSFLATAGGWQRWAFTALGIVAALVIAWLLKRHSGQKLF
CTALALILGGALGNVIDRLVHGHVIDFVDFHVGGWHWPAFNIADSGITIGAVLLVLDE
LRRVRAAR"
misc_feature complement(518372..518794)
/locus_tag="RBRH_00937"
/note="lipoprotein signal peptidase; Reviewed; Region:
lspA; PRK00376"
/db_xref="CDD:178992"
gene complement(518828..521665)
/locus_tag="RBRH_00936"
/db_xref="GeneID:9985708"
CDS complement(518828..521665)
/locus_tag="RBRH_00936"
/EC_number="6.1.1.5"
/codon_start=1
/transl_table=11
/product="isoleucyl-tRNA synthetase"
/protein_id="YP_004028219.1"
/db_xref="GI:312795297"
/db_xref="GeneID:9985708"
/translation="MSDKKTDSKQPSKYPVNLLDTPFPMRGDLPKREPQWVQEWQQNK
VYEAIREASRGRPKFVLHDGPPYANGDIHIGHAVNKILKDMIVKARNMAGFDADYVPG
WDCHGMPIEIQIEKRFGKSLPVELVQRNAREYAAEQIERQKADFRRLGLIGDWDNPYR
TMNFANEANEIRALARILEKGYVFRGLKPVNWCFDCGSALAEAEVEYKDRVDPAVDVA
FPFAEPDRIAGAFGLPSLPSADGAIVIWTTTPWTIPANQALNVNPELSYSLVDTPRGL
LILASERVEPCLATYGLDGTVIASAPGAALGGICFHHPLANLHPGYKRTAPVYFGDYV
TIDSGTGVVHSSPAYGIEDFQSCKAHGIDDGDILSPVMGDGRYIESLPLFGGLSIWEA
NPRIVDALRDAGSLLHTNHYAHSYMHCWRHKTPIIYRATSQWFAGMDLTPVGGGKTLR
ETALDGIEATTFYPAWGKQRLHNMIAHRPDWTLSRQRQWGVPMAFFVHKETGQLHPRT
LELLEQVAQRVEQHGIEAWQSLDARELLGDDADLYEKNRDTMDVWFDSGTTHWHVLRG
SHAQQLQWPADLYLEGSDQHRGWFHSSLLTGSMLDGRPPYKALLTHGFTVDGQGRKMS
KSVGNVIAPQEVSNKLGAEIIRLWVASTDYSGELSISDEILKRVVESYRRIRNTLRFL
LANLSDFDPNRNRVLSEQWLEIDRYALARAAALQKEVLDHYDAYEFHPVVAKLQTFCS
EDLGGFYLDVLKDRLYTSAVDSPARRSAQSALYHITQGLLRLIAPFLSFTAEEAWKIF
QPGHTTIFTETYYVYPPLPEGAALLDKWALVRQLRGDVTKALEAAREAGRIGSSLQAE
VEIRAHGARYDTLASLGDDLKFVLITSAARVIKVDNEADEAIDVVASRYLKCERCWHY
REEVGANAEHPTLCGRCTANLFGDGEHRSIA"
misc_feature complement(518855..521629)
/locus_tag="RBRH_00936"
/note="isoleucyl-tRNA synthetase; Reviewed; Region: ileS;
PRK05743"
/db_xref="CDD:180231"
misc_feature complement(<521090..521497)
/locus_tag="RBRH_00936"
/note="nucleotidyl transferase superfamily; Region:
nt_trans; cl00015"
/db_xref="CDD:212170"
misc_feature complement(521438..521449)
/locus_tag="RBRH_00936"
/note="active site"
/db_xref="CDD:173912"
misc_feature complement(521438..521449)
/locus_tag="RBRH_00936"
/note="HIGH motif; other site"
/db_xref="CDD:173912"
misc_feature complement(order(521438..521440,521447..521449))
/locus_tag="RBRH_00936"
/note="nucleotide binding site [chemical binding]; other
site"
/db_xref="CDD:173912"
misc_feature complement(520466..>520714)
/locus_tag="RBRH_00936"
/note="Leucyl-tRNA synthetase, Domain 2; Region:
tRNA-synt_1_2; pfam13603"
/db_xref="CDD:205781"
misc_feature complement(519695..>520393)
/locus_tag="RBRH_00936"
/note="catalytic core domain of isoleucyl-tRNA
synthetases; Region: IleRS_core; cd00818"
/db_xref="CDD:173909"
misc_feature complement(order(519791..519808,519818..519832,
519899..519901,519905..519907,519911..519925,
519998..520000,520007..520009,520256..520258))
/locus_tag="RBRH_00936"
/note="active site"
/db_xref="CDD:173909"
misc_feature complement(519788..519802)
/locus_tag="RBRH_00936"
/note="KMSKS motif; other site"
/db_xref="CDD:173909"
misc_feature complement(519155..519688)
/locus_tag="RBRH_00936"
/note="Anticodon-binding domain of bacterial and
eukaryotic mitochondrial isoleucyl tRNA synthetases;
Region: Anticodon_Ia_Ile_BEm; cd07960"
/db_xref="CDD:153414"
misc_feature complement(order(519155..519157,519164..519166,
519410..519412,519419..519421,519431..519433,
519446..519448,519455..519460,519467..519472,
519479..519481,519623..519628,519635..519637,
519644..519646,519656..519658,519665..519667,
519677..519679))
/locus_tag="RBRH_00936"
/note="tRNA binding surface [nucleotide binding]; other
site"
/db_xref="CDD:153414"
misc_feature complement(order(519626..519628,519635..519637))
/locus_tag="RBRH_00936"
/note="anticodon binding site; other site"
/db_xref="CDD:153414"
misc_feature complement(518873..518953)
/locus_tag="RBRH_00936"
/note="Zinc finger found in FPG and IleRS; Region:
zf-FPG_IleRS; pfam06827"
/db_xref="CDD:203527"
gene complement(521813..522925)
/locus_tag="RBRH_00935"
/db_xref="GeneID:9985707"
CDS complement(521813..522925)
/locus_tag="RBRH_00935"
/EC_number="2.7.1.26"
/EC_number="2.7.7.2"
/codon_start=1
/transl_table=11
/product="riboflavin kinase/FMN adenylyltransferase"
/protein_id="YP_004028220.1"
/db_xref="GI:312795298"
/db_xref="GeneID:9985707"
/translation="MRRRGHPTPQPDRPIIVRVFRGLPNAESRAPCALTIGNFDGVHR
GHQALLAQVRAAATARALPVCVMTFEPHPREFFDPAGAPPRITMLRDKLEALRRNGVD
RIVVEHFNHTFASQSPAAFVEHIIVNGLHARWVMIGDDFRYGAKRAGDFLSLKAAGAQ
YGFEVEQMPTVADPCGARISSSAVRASLVAGDLAAARAALGRAIVISGHVVHGMKLGR
DLGFPTLNLPISHKRPALAGIFIVRVHGIEAGPLPGVASLGWRPTVDDSGRVLLEVHL
LDWHGDAYGKLVRVEFLEKLRDEQKFVDLEALGRAIACDVAAAREYFATQGDRAAAPT
HADWTAAPANPATQPEQRGGPGPGGDFATSATDRIR"
misc_feature complement(521951..522874)
/locus_tag="RBRH_00935"
/note="bifunctional riboflavin kinase/FMN
adenylyltransferase; Reviewed; Region: PRK05627"
/db_xref="CDD:180171"
misc_feature complement(522287..522832)
/locus_tag="RBRH_00935"
/note="FAD synthetase, N-terminal domain of the
bifunctional enzyme; Region: FAD_synthetase_N; cd02064"
/db_xref="CDD:185679"
misc_feature complement(order(522383..522391,522416..522418,
522506..522508,522788..522790,522797..522799,
522806..522817))
/locus_tag="RBRH_00935"
/note="active site"
/db_xref="CDD:185679"
misc_feature complement(521954..522310)
/locus_tag="RBRH_00935"
/note="Riboflavin kinase; Region: Flavokinase; smart00904"
/db_xref="CDD:197972"
gene 522797..522955
/locus_tag="RBRH_00934"
/db_xref="GeneID:9985706"
CDS 522797..522955
/locus_tag="RBRH_00934"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004028221.1"
/db_xref="GI:312795299"
/db_xref="GeneID:9985706"
/translation="MHAVEVADRQRAGRAALGIWKTPEDSHDDWPVGLRRWMAAPTHR
AGTLPQSP"
gene 523036..523677
/locus_tag="RBRH_00933"
/db_xref="GeneID:9985705"
CDS 523036..523677
/locus_tag="RBRH_00933"
/EC_number="2.1.2.2"
/codon_start=1
/transl_table=11
/product="phosphoribosylglycinamide formyltransferase"
/protein_id="YP_004028222.1"
/db_xref="GI:312795300"
/db_xref="GeneID:9985705"
/translation="MKKLVILISGRGSNMEAIVRACAAQRWPARVAAVVSNRPDAAGL
AFAAAHGVTTAVVDHTRFDGREAFDAALAQVLDAHEPDLVVLAGFMRVLTPAFVERYA
ARMMNVHPSLLPSFTGLHTHQRALDAGVAVHGATVHFVTAELDHGPIIAQGVVPVLAG
DDAAALAARVLRLEHALYPRAVRWFVEDRLRVRDGRVELAAAEPRLVFGGDTV"
misc_feature 523036..523632
/locus_tag="RBRH_00933"
/note="phosphoribosylglycinamide formyltransferase;
Reviewed; Region: purN; PRK05647"
/db_xref="CDD:180182"
misc_feature 523042..523590
/locus_tag="RBRH_00933"
/note="Phosphoribosylglycinamide formyltransferase (GAR
transformylase, GART); Region: FMT_core_GART; cd08645"
/db_xref="CDD:187714"
misc_feature order(523057..523059,523072..523080,523291..523314,
523327..523329,523354..523365,523387..523389,
523447..523449,523453..523458,523465..523470,
523555..523557)
/locus_tag="RBRH_00933"
/note="active site"
/db_xref="CDD:187714"
misc_feature order(523072..523077,523294..523299,523357..523359,
523363..523365,523555..523557)
/locus_tag="RBRH_00933"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:187714"
misc_feature order(523291..523293,523300..523302,523306..523314,
523327..523329,523354..523356,523453..523458,
523465..523470)
/locus_tag="RBRH_00933"
/note="cosubstrate binding site; other site"
/db_xref="CDD:187714"
misc_feature order(523354..523356,523360..523362,523468..523470)
/locus_tag="RBRH_00933"
/note="catalytic site [active]"
/db_xref="CDD:187714"
gene 523674..524960
/locus_tag="RBRH_00932"
/db_xref="GeneID:9985704"
CDS 523674..524960
/locus_tag="RBRH_00932"
/EC_number="2.1.1.-"
/codon_start=1
/transl_table=11
/product="16S rRNA m(5)C 967 methyltransferase"
/protein_id="YP_004028223.1"
/db_xref="GI:312795301"
/db_xref="GeneID:9985704"
/translation="MKLHGFLIGQTETLLADVLKFAGPADAAASRFFRAHPKLGHAER
GVIAETVFAVLRRKMEYGHLAESGSGTPARRLTLLGLMQIAGLNALRAHLSPQEFAWL
DHVSKIDPASLPARVRTNLPLWIESALGARLATPDAGPDAVAQELARLAAALNYPAPL
DLRANPIRTNRDAVLAALVEAGVQAEPTPYAPLGIRVAGKPAIQTLAAFRQGWFEVQD
EGSQLLCQLVAPRRGEMVVDFCAGAGGKTLALGAMMRSSGRLYAFDVSDKRLGKLKPR
LARSGLSNVHPVVIDSEHDVKIKRLAGKIDRVLVDAPCSGLGTLRRNPDLKWRQTPQS
VAELAVKQASILAAAARLLKPGGRLVYATCSLLGDENEGIVEPFLAAHPMFERVPASQ
VLAEQKIALDTGDDLTLWPHRHGTDGFFATVMQRVA"
misc_feature 523746..524951
/locus_tag="RBRH_00932"
/note="16S rRNA methyltransferase B; Provisional; Region:
PRK14901"
/db_xref="CDD:184894"
misc_feature 524445..524756
/locus_tag="RBRH_00932"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cd02440"
/db_xref="CDD:100107"
gene 524962..526335
/locus_tag="RBRH_00931"
/db_xref="GeneID:9985703"
CDS 524962..526335
/locus_tag="RBRH_00931"
/codon_start=1
/transl_table=11
/product="mechanosensitive ion channel"
/protein_id="YP_004028224.1"
/db_xref="GI:312795302"
/db_xref="GeneID:9985703"
/translation="MQDQVLTHLFGDLMREIGQPMRDLGQPAVLWQVVALIGALALAW
VLAGYARQRLDAYRRARNAAVRFGADGLNKALFPFLGWLIVDGTGLVLGQAMKTPLLD
LARVPLFGIALIYVALYLMRRVFSQDGHLHGLAYLVEKIVTVLVWAGMALTVVGIQHD
VLHWMASVEFRVANAHLTLLSLCNGLLWVMITLIGALWAGRTLDERLMQANSLDANLQ
VVLSRLGRASLILAAVLVSLSIVGIDITVLGVFGGALGVGLGFGLQKIASNYVSGFII
LLDRSLRLGDTICVGGLQGRVTQIRTRYTVVRRLDGVETLVPNEKLITDIVQNQSSFL
TRGWTKVSVQVAYGTDVDLAMRVLVQATQGVERVLQDPAPRPYLAGFGANGIDLELGF
WIADAALGTASVRSAVNYNIWAGFNAHGIRVPRAQREVRILNAAAIEPLSAAIEPMPV
AAVETAN"
misc_feature 525475..526272
/locus_tag="RBRH_00931"
/note="mechanosensitive channel MscS; Provisional; Region:
PRK10334"
/db_xref="CDD:182386"
misc_feature 525685..526230
/locus_tag="RBRH_00931"
/note="Mechanosensitive ion channel; Region: MS_channel;
pfam00924"
/db_xref="CDD:201506"
gene complement(526488..526604)
/locus_tag="RB 