LOCUS NC_015163 97188 bp DNA circular CON 02-MAY-2023
DEFINITION Deinococcus proteolyticus MRP plasmid pDEIPR04, complete sequence.
ACCESSION NC_015163
VERSION NC_015163.1
DBLINK BioProject: PRJNA224116
BioSample: SAMN00016729
Assembly: GCF_000190555.1
KEYWORDS GSC:MIGS:2.1; RefSeq.
SOURCE Deinococcus proteolyticus MRP
ORGANISM Deinococcus proteolyticus MRP
Bacteria; Deinococcota; Deinococci; Deinococcales; Deinococcaceae;
Deinococcus.
REFERENCE 1 (bases 1 to 97188)
AUTHORS Copeland,A., Zeytun,A., Yassawong,M., Nolan,M., Lucas,S.,
Hammon,N., Deshpande,S., Cheng,J.F., Han,C., Tapia,R.,
Goodwin,L.A., Pitluck,S., Mavromatis,K., Liolios,K., Pagani,I.,
Ivanova,N., Mikhailova,N., Pati,A., Chen,A., Palaniappan,K.,
Land,M., Hauser,L., Jeffries,C.D., Brambilla,E.M., Rohde,M.,
Sikorski,J., Pukall,R., Goker,M., Detter,J.C., Woyke,T.,
Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Kyrpides,N.C.,
Klenk,H.P. and Lapidus,A.
TITLE Complete genome sequence of the orange-red pigmented,
radioresistant Deinococcus proteolyticus type strain (MRP(T))
JOURNAL Stand Genomic Sci 6 (2), 240-250 (2012)
PUBMED 22768367
REFERENCE 2 (bases 1 to 97188)
AUTHORS Lucas,S., Copeland,A., Lapidus,A., Bruce,D., Goodwin,L.,
Pitluck,S., Kyrpides,N., Mavromatis,K., Pagani,I., Ivanova,N.,
Ovchinnikova,G., Zeytun,A., Detter,J.C., Han,C., Land,M.,
Hauser,L., Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T.,
Wu,D., Pukall,R., Steenblock,K., Brambilla,E., Klenk,H.-P. and
Eisen,J.A.
CONSRTM US DOE Joint Genome Institute (JGI-PGF)
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) US DOE Joint Genome Institute, 2800
Mitchell Drive, Walnut Creek, CA 94598-1698, USA
COMMENT REFSEQ INFORMATION: The reference sequence is identical to
CP002540.1.
URL -- http://www.jgi.doe.gov
JGI Project ID: 4087341
Source DNA and organism available from Hans-Peter Klenk at the
German Collection of Microorganisms and Cell Cultures (DSMZ)
(hans-peter.klenk@dsmz.de)
Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)
David Bruce (microbe@cuba.jgi-psf.org)
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LANL
Annotation by JGI-ORNL and JGI-PGF
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. It is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
The annotation was added by the NCBI Prokaryotic Genome Annotation
Pipeline (PGAP). Information about PGAP can be found here:
https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
##MIGS-Data-START##
investigation_type :: bacteria_archaea
project_name :: Deinococcus proteolyticus MRP, DSM 20540
collection_date :: Missing
lat_lon :: Missing
depth :: Missing
alt_elev :: Missing
country :: Missing
environment :: Soil
num_replicons :: 5
ref_biomaterial :: DSM 20540, ATCC 35074, CCM 2703
biotic_relationship :: Free living
trophic_level :: Missing
rel_to_oxygen :: Aerobe
isol_growth_condt :: Missing
sequencing_meth :: WGS
assembly :: Newbler v. 2.3 (pre-release)
finishing_strategy :: Finished
GOLD Stamp ID :: Gi04185
Type Strain :: Yes
Funding Program :: DOE-GEBA 2007
Gene Calling Method :: Prodigal 1.4, GenePRIMP
Isolation Site :: Faeces of Lama glama
Isolation Comments :: isolated by M. Kobatake MRP
Host Name :: Lama glama
Cell Shape :: Coccus-shaped
Motility :: Nonmotile
Temperature Range :: Mesophile
Gram Staining :: Gram+
Phenotypes :: Radiation resistant
##MIGS-Data-END##
##Genome-Assembly-Data-START##
Finishing Goal :: Finished
Current Finishing Status :: Finished
Assembly Method :: Newbler v. 2.3
Genome Coverage :: 30x
Sequencing Technology :: 454-Titanium, Illumina
##Genome-Assembly-Data-END##
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI RefSeq
Annotation Date :: 05/02/2023 02:11:33
Annotation Pipeline :: NCBI Prokaryotic Genome
Annotation Pipeline (PGAP)
Annotation Method :: Best-placed reference protein
set; GeneMarkS-2+
Annotation Software revision :: 6.5
Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA
Genes (total) :: 2,790
CDSs (total) :: 2,732
Genes (coding) :: 2,688
CDSs (with protein) :: 2,688
Genes (RNA) :: 58
rRNAs :: 3, 3, 3 (5S, 16S, 23S)
complete rRNAs :: 3, 3, 3 (5S, 16S, 23S)
tRNAs :: 46
ncRNAs :: 3
Pseudo Genes (total) :: 44
CDSs (without protein) :: 44
Pseudo Genes (ambiguous residues) :: 0 of 44
Pseudo Genes (frameshifted) :: 17 of 44
Pseudo Genes (incomplete) :: 28 of 44
Pseudo Genes (internal stop) :: 4 of 44
Pseudo Genes (multiple problems) :: 4 of 44
CRISPR Arrays :: 3
##Genome-Annotation-Data-END##
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..97188
/organism="Deinococcus proteolyticus MRP"
/mol_type="genomic DNA"
/strain="MRP"
/isolation_source="feces"
/host="Lama glama"
/culture_collection="DSM:20540"
/type_material="type strain of Deinococcus proteolyticus"
/db_xref="taxon:693977"
/plasmid="pDEIPR04"
/collected_by="M. Kobatake MRP"
gene 335..1540
/locus_tag="DEIPR_RS13285"
/old_locus_tag="Deipr_2632"
/old_locus_tag="IO79_RS13150"
CDS 335..1540
/locus_tag="DEIPR_RS13285"
/old_locus_tag="Deipr_2632"
/old_locus_tag="IO79_RS13150"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="transcriptional regulator"
/protein_id="WP_174260429.1"
/translation="MSQVYNRYYLEPTVTAMLQNVRGAFALIQALSDCGAHTQAQQLL
NLLPLRENGYWFDANVQHLGGLLAWRQFDEDEALRRLDQAAVLARSAQDDELLSRILQ
TMFLTLVYFRRYSRAEDVRIQLIHIAASETYLEAWISEAGAALQLIRGERPATSRATS
LREVGLLLRRVAGDSRTEMFPEGQRLLWENWQPLPEGLGSLSEADRADHVLLRPPSMR
TDHHFRLRLLGGLRAELDGQPIELSDRHLLLLSALALGPQDATELAGALYAGRNPSGT
LRTAVSRLRDRLQATGISGSDTVITRAQGGQYRLADGWTAEVDAQTVLQGNPADLPDL
YAPLVCAVAVQREHLIVLTPDTFDREVTRMLERYPNRQQALLWLAALNREYPQRFTPL
RGPVNQTAG"
gene complement(1525..1953)
/locus_tag="DEIPR_RS13290"
/old_locus_tag="Deipr_2633"
/old_locus_tag="IO79_RS13155"
CDS complement(1525..1953)
/locus_tag="DEIPR_RS13290"
/old_locus_tag="Deipr_2633"
/old_locus_tag="IO79_RS13155"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_013615989.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_013615989.1"
/translation="MYYASVTSYTAGLPPGLALVDGAQVQAYIATDDQQCRFVQRALK
LVENCAELTLWSADQQRALERMLNRPLKVMPTLLETQLEQLGYPSLSPAYACIRLGLD
EPGEDALSQAYALKALHGHLDKLSAAAPMCAPVHSVQPAV"
gene 2047..2322
/locus_tag="DEIPR_RS13295"
/old_locus_tag="Deipr_2634"
/old_locus_tag="IO79_RS13160"
CDS 2047..2322
/locus_tag="DEIPR_RS13295"
/old_locus_tag="Deipr_2634"
/old_locus_tag="IO79_RS13160"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_009180746.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="antitoxin"
/protein_id="WP_013615990.1"
/translation="MHKTYLRKVGGSVMLSIPPALLDVLELTAGTAVGLNVEGGQLTV
QPAPKPRYSLEELLAQCDLEAQCDPAGAQDAEEQHWLSDAPVGRELL"
gene 2334..2666
/locus_tag="DEIPR_RS13300"
/old_locus_tag="Deipr_2635"
/old_locus_tag="IO79_RS13165"
CDS 2334..2666
/locus_tag="DEIPR_RS13300"
/old_locus_tag="Deipr_2635"
/old_locus_tag="IO79_RS13165"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_011146601.1"
/GO_function="GO:0003677 - DNA binding [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="type II toxin-antitoxin system PemK/MazF family
toxin"
/protein_id="WP_041223179.1"
/translation="MRRGEIYLVDLNPTAGHEQRGKRPVLVVSPNAFNALTGTPIVLP
VTSGGQFARMAGFAVSLDEAGTQTTGIVRCDQPRALDFSARGARLLEMVPRDVVDEVL
ARLAVLFS"
gene complement(2659..3036)
/locus_tag="DEIPR_RS13305"
/old_locus_tag="Deipr_2636"
/old_locus_tag="IO79_RS13170"
CDS complement(2659..3036)
/locus_tag="DEIPR_RS13305"
/old_locus_tag="Deipr_2636"
/old_locus_tag="IO79_RS13170"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_013615992.1"
/translation="MHSPAGPVTVTLSLQRVKRKYIAECKLDNTVFRVQTSIAAGVDQ
GTKRAATARKQLAEQLRLCLKPHLAVGDIETITQTVHKFRNGRNNTSISTLAFKTLLN
KTSPLKNQPAPTTHDQDATQQLS"
gene complement(3040..3654)
/locus_tag="DEIPR_RS13310"
/old_locus_tag="Deipr_2637"
/old_locus_tag="IO79_RS13175"
CDS complement(3040..3654)
/locus_tag="DEIPR_RS13310"
/old_locus_tag="Deipr_2637"
/old_locus_tag="IO79_RS13175"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_013615946.1"
/GO_component="GO:0016020 - membrane [Evidence IEA]"
/GO_function="GO:0005524 - ATP binding [Evidence IEA]"
/GO_function="GO:0008233 - peptidase activity [Evidence
IEA]"
/GO_process="GO:0006508 - proteolysis [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="C39 family peptidase"
/protein_id="WP_013615993.1"
/translation="MNRTRSLLLLLLGLLPMTLPTAEAAKGAPVTKAAIRAAQPAPAL
ALQNMPIIYQGYNDCGPASIGMVLAYYKQPVDVKTISAATKASPNSYMHVEQIGRYVG
QYGLQTTQVKNANIGAPVRLIRLGVPVIALTYFQQVGVIPHFRVIRGFDQPKGLLYLA
DPLAGSVAMRYTDFNMLWNTQGKQMVAVYPPGLHQKVQAAIRGA"
gene 3758..4204
/locus_tag="DEIPR_RS13315"
/old_locus_tag="Deipr_2638"
/old_locus_tag="IO79_RS14105"
CDS 3758..4204
/locus_tag="DEIPR_RS13315"
/old_locus_tag="Deipr_2638"
/old_locus_tag="IO79_RS14105"
/inference="COORDINATES: protein motif:HMM:TIGR02293.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="antitoxin Xre-like helix-turn-helix
domain-containing protein"
/protein_id="WP_013615994.1"
/translation="MTQTFTPTWTPPPFPGTSLLGLDASTLLELGDAVDQGFQSAALE
GLARHLGMTLGQMLALLGVSESTYHSRRRSGRPLSADDSAALYHLARVTEAAEQYFTD
PAEAHRWLSAPRVTFGNRTPLQFALLPGGAEYVTAVLGRLEHGVYV"
gene 4232..4738
/locus_tag="DEIPR_RS13320"
/old_locus_tag="Deipr_2639"
/old_locus_tag="IO79_RS13185"
CDS 4232..4738
/locus_tag="DEIPR_RS13320"
/old_locus_tag="Deipr_2639"
/old_locus_tag="IO79_RS13185"
/inference="COORDINATES: protein motif:HMM:NF020387.2"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="RES family NAD+ phosphorylase"
/protein_id="WP_013615995.1"
/translation="MSLTLYRLGKQQYLGSPLLSEYGVGAALYGGRWNSPDPVSLRRR
VIYASDTLAQATLEVVVHADSQVLRTAAHGYVRFHVDEAAVADLDLSGLPDTWNALPG
TPASQMIGDQWFDEQVSPVLRVPSVILPLDVYGPGQSNYLINPLHPDTERTVRFGGVW
PYRFDPRL"
gene complement(4714..5091)
/locus_tag="DEIPR_RS13325"
/old_locus_tag="Deipr_2640"
/old_locus_tag="IO79_RS13190"
CDS complement(4714..5091)
/locus_tag="DEIPR_RS13325"
/old_locus_tag="Deipr_2640"
/old_locus_tag="IO79_RS13190"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_148232020.1"
/translation="MRLRVPWPLLLFVLLPGTLAGITHILWPTPYVPVPQLEARCKAA
AEKHLGFVLQTDDLRVISMDKAMVSRSGGDLNRARQLDLVVRTPEGVREAHCTSTRPP
AVSLDIRRPVPAGSGLQSLGSKR"
gene complement(5171..5569)
/locus_tag="DEIPR_RS13330"
/old_locus_tag="Deipr_2641"
/old_locus_tag="IO79_RS13195"
CDS complement(5171..5569)
/locus_tag="DEIPR_RS13330"
/old_locus_tag="Deipr_2641"
/old_locus_tag="IO79_RS13195"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_013615945.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_013615997.1"
/translation="MTAALHLSLPLTLQDEAQSPIEVRHGQLIRAFGVAEGTLLLVLE
EECRRSGAAAGEWLHISSARWIQQAARLSGGRLPFPRHRLRHHLSALARTGIIERRYL
RRHEGFEFRLNQDVLQQKLKEARTDREGRK"
gene complement(5566..6129)
/locus_tag="DEIPR_RS13335"
/old_locus_tag="Deipr_2642"
/old_locus_tag="IO79_RS13200"
CDS complement(5566..6129)
/locus_tag="DEIPR_RS13335"
/old_locus_tag="Deipr_2642"
/old_locus_tag="IO79_RS13200"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_013615944.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_013615998.1"
/translation="MTTLITNRGGHPEKRFSLERSLDPWHAWVRAMMLLALLLPLPAA
VSWLSVQGLATAGLSSLGGLLLFTLLLLTTWAALSTPLVLLVSVISLTLTARWDQVSQ
RQDLAFPDLLSHGVIGAALLIPAVAVLWIELDIAGLNPHFSLLALGLLLPLGWNLWHN
PLRDDPEFGWRRGNGPQDESEQQEAEA"
gene 6747..>7238
/locus_tag="DEIPR_RS13340"
/old_locus_tag="Deipr_2643"
/old_locus_tag="IO79_RS13205"
/pseudo
CDS 6747..>7238
/locus_tag="DEIPR_RS13340"
/old_locus_tag="Deipr_2643"
/old_locus_tag="IO79_RS13205"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_086558286.1"
/note="incomplete; partial in the middle of a contig;
missing C-terminus; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="IS4 family transposase"
gene 7363..8265
/locus_tag="DEIPR_RS13345"
/old_locus_tag="Deipr_2644"
/old_locus_tag="IO79_RS14110"
CDS 7363..8265
/locus_tag="DEIPR_RS13345"
/old_locus_tag="Deipr_2644"
/old_locus_tag="IO79_RS14110"
/inference="COORDINATES: protein motif:HMM:NF021537.2"
/note="predicted Zn-dependent protease with a strongly
conserved HExxH motif; predicted Zn-dependent protease
with a strongly conserved HExxH motif; Derived by
automated computational analysis using gene prediction
method: Protein Homology."
/codon_start=1
/transl_table=11
/product="DUF2268 domain-containing putative Zn-dependent
protease"
/protein_id="WP_013616000.1"
/translation="MKIIEVNTLPALRQVLLAPAEQQDELFRMLVMEPMRPTWEPMLA
YMPHDPSDPSLSAARLIHLYRPELGAERGLRALEQLERAQVFEVNRRVLAEAMDALHP
DAHEGLSPDITLTLALMDPDGPMKEGYVGMGNTPGWVGLYIWPRNENWLKLPAITAHE
FNHNIRFQQPDWTFPMTLGAYLVAEGLGETFAAELHGESSLGPWTTDLQEETLRQLAP
RYEELLLDNDFTQVRGYIFGDLPPEEFGAFAVPHVGVPPYAGYALGYHIVKDFLRRTG
ISAAEATYLPWRDIVNGSGWMRVP"
gene 8491..9078
/locus_tag="DEIPR_RS13350"
/old_locus_tag="Deipr_2645"
/old_locus_tag="IO79_RS13215"
CDS 8491..9078
/locus_tag="DEIPR_RS13350"
/old_locus_tag="Deipr_2645"
/old_locus_tag="IO79_RS13215"
/inference="COORDINATES: protein motif:HMM:NF024248.2"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="helix-turn-helix domain-containing protein"
/protein_id="WP_169310716.1"
/translation="MIIIFDNDNNVAMSQADFLLHPVRMRIIQTLLSEAELTTTQLRE
RLPDIPVATLYRHMAELTGSKLLEVVREEKVRGTAERTYRLALELAQLDAQTVAAMSA
EELQAAFGLFSAGLSADLGRYLQQERISPLEDGLTFAQVAVYASAEQYQELMTTWQTS
LQALMGQGPAPKRQKRVVATIVLPVPLLPEPEAEA"
gene 9075..9737
/locus_tag="DEIPR_RS13355"
/old_locus_tag="Deipr_2646"
/old_locus_tag="IO79_RS13220"
CDS 9075..9737
/locus_tag="DEIPR_RS13355"
/old_locus_tag="Deipr_2646"
/old_locus_tag="IO79_RS13220"
/inference="COORDINATES: protein motif:HMM:NF012235.2"
/GO_function="GO:0005524 - ATP binding [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="ABC transporter ATP-binding protein"
/protein_id="WP_013616002.1"
/translation="MSAGVTLENLVLGYQQPILGPVSLHLKAGIHVLLGRNGAGKTTL
MRTIAGILPPLSGKVQLGQPGRIGYLGHRAALSEGLTVEQNLKFWQHISRLYAQPQPL
ETLTEQFDLQHLLPKRVRQLSRGQRQRADLARLSLVRPDVLLLDEPLTGLDPVQARYI
RQKMQEWSAECPLIYSTHSLPEALEMTSSFLLVQGRGVRLLDISELAEPEIELLLWLE
AS"
gene 9734..10519
/locus_tag="DEIPR_RS13360"
/old_locus_tag="Deipr_2647"
/old_locus_tag="IO79_RS13225"
CDS 9734..10519
/locus_tag="DEIPR_RS13360"
/old_locus_tag="Deipr_2647"
/old_locus_tag="IO79_RS13225"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_013616003.1"
/translation="MTLPTHLTLLMTLRAWWQQGKSVSWLSLLAGLVLGGGTLLVRGG
VNGVPDELPAAVMGLANVTAQGQLLEVNTFMVAMSPVLLSLLCALLATVITPSIVSED
VRGGILETLLTTPLGRARIFRAYLGAAILLTLLCWGLCGTALAVTWALLDGVLPLHLE
LSTSLLWILAALPLSMTFWSTSVMVCASLLYPASLDASAGVNGGPARLLALGPAILLL
PAVVTASQFLWPLLAGSLLLSGLAATLVLWITAKRFKTTAVLE"
gene 10696..11241
/locus_tag="DEIPR_RS13365"
/old_locus_tag="Deipr_2648"
/old_locus_tag="IO79_RS13230"
CDS 10696..11241
/locus_tag="DEIPR_RS13365"
/old_locus_tag="Deipr_2648"
/old_locus_tag="IO79_RS13230"
/inference="COORDINATES: protein motif:HMM:NF024803.2"
/GO_function="GO:0003677 - DNA binding [Evidence IEA]"
/GO_process="GO:0006355 - regulation of DNA-templated
transcription [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="MerR family transcriptional regulator"
/protein_id="WP_013616004.1"
/translation="MQLKIGELAQRTGLTTRTLRHYDELGLLTPEHRTEADYRLYSEG
DLYRLLHIQGLKSLGLSLEEIRQALDHPEFQPQGVIERQIAMIEERQAEHTRLLARLR
NLKEAAASGWEEVAEVIALSERLRHPSRIQRTLAALSVTPADTAVLSELVERLGTEPD
FSVREHLTWAVVQLGEQALPG"
gene complement(11258..12094)
/locus_tag="DEIPR_RS13370"
/old_locus_tag="Deipr_2649"
CDS complement(11258..12094)
/locus_tag="DEIPR_RS13370"
/old_locus_tag="Deipr_2649"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_013616020.1"
/GO_process="GO:0015074 - DNA integration [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="integrase core domain-containing protein"
/protein_id="WP_013616005.1"
/translation="MLEDHPKLSLSKFASEVERPYHVLRDARQNAERSAQRTERCQHV
LEAVRLRALEEPLSGYRLIYQALQDVLRPAPGLHTVRRCMVELKVQRPVPRKKRRPAV
NPTPVVLWPAGRRIQIDATRLRLPDGICWAYLVLDVESRALLHIEVVRQLSASSAVTA
LQRGVHVLHHLGIHDPLLVMTDGGSDFTSGAFQAACQELGNWVRAKVSQKGGMGILER
LNRTFKYDGVFREELTDIAQLRAFSTKFRDWYNSGRRHSSLGYAYPWVKLLAATESSN
VA"
gene complement(12127..12414)
/locus_tag="DEIPR_RS13375"
/old_locus_tag="Deipr_2650"
/old_locus_tag="IO79_RS13240"
CDS complement(12127..12414)
/locus_tag="DEIPR_RS13375"
/old_locus_tag="Deipr_2650"
/old_locus_tag="IO79_RS13240"
/inference="COORDINATES: protein motif:HMM:NF013677.2"
/GO_function="GO:0003677 - DNA binding [Evidence IEA]"
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/GO_process="GO:0006313 - transposition, DNA-mediated
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="transposase"
/protein_id="WP_013616006.1"
/translation="MGKQRKTWSPEVKEQIVLAVLSGEQTIAEAAREYEVSESLIHTW
RAQFLEAGRARLQGARPDAAQKKLEKEVEQLKAIIADKELSLYIAKKIRGL"
gene complement(12599..14785)
/locus_tag="DEIPR_RS13380"
/old_locus_tag="Deipr_2651"
/old_locus_tag="IO79_RS13245"
CDS complement(12599..14785)
/locus_tag="DEIPR_RS13380"
/old_locus_tag="Deipr_2651"
/old_locus_tag="IO79_RS13245"
/EC_number="3.6.4.-"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_017870386.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="nuclease-related domain-containing DEAD/DEAH box
helicase"
/protein_id="WP_013616007.1"
/translation="MAEFIVTEAFGGAGEEGEIKVFEAVKAAYAGEEALGFWKYPLVT
KVTVREPDILIADPELGIIVIEVKSLPLDMIGAVTGYRWELTRPYYGKQQLNPYEQAR
RQAQALGELAVRKSGLTQLATRATVAVPLITREAWDNRFGALLSDVPMLFADQMTPAR
LRRALEMTPPVRYGEPLGDEDWLSLRRALGTSGSVPKRQVRYLQAPLESRRKIDLIAR
TARHLHAFDLQQELIAKTIPPGPQRIRGIAGSGKTVLLAQKAANMHLRHPDWNIALVF
FSRSLYDQIKFQVNHWLKQATNGEVTLETAQHRLRILHAWGSKDQPGFYRTLATQIGA
EPLTVANTPDASPTAKLLFACKALLDDAKATGRSLQIFDAVLIDEGQDLVHEEAALSF
EEKQAFYWMAYQSLRPVARDALLDTGEPEARRLIWAYDEAQSLNTLTIPTTRALFGEA
GAQVFGAGVTYKGGIKKSEIMNRCYRTPGPVLLAAHALGMGLLREEGMLAGLTNKKDW
TAIGYEVEGRFLSGSQVTLTRSPANSPNPLAQFTDEPLVTFEHYPDRRAELKALMHSI
QRDLSEGGLQPSRHLLVVVPGLEWQPYNLQREVFQTLRAAGISVYLPGNKDVNVPKQK
WPNTDPNGFWRDGAVTVSPVTQAKGNEADVVYVVGLDHIAAQEDSIKLRNQLFVGISR
SRGWVHLSGCGMQGKTLTAEIERVIAAGDTLNFTYRQPKRQLDDVE"
gene complement(15168..17012)
/locus_tag="DEIPR_RS13385"
/old_locus_tag="Deipr_2652"
/old_locus_tag="IO79_RS13250"
CDS complement(15168..17012)
/locus_tag="DEIPR_RS13385"
/old_locus_tag="Deipr_2652"
/old_locus_tag="IO79_RS13250"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_014685618.1"
/GO_component="GO:0055052 - ATP-binding cassette (ABC)
transporter complex, substrate-binding subunit-containing
[Evidence IEA]"
/GO_function="GO:0042626 - ATPase-coupled transmembrane
transporter activity [Evidence IEA]"
/GO_function="GO:0140359 - ABC-type transporter activity
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="ABC transporter substrate-binding protein"
/protein_id="WP_245532774.1"
/translation="MTPRTGISLTLLLLLSACAAPQEATSSATTGAASSSAASAAATS
AGTTNASGSAAAPAATSGSQAGSDTLVLMEAADIPTLDPGAVFDGVSSRLVQNTYETL
VAYPAGSLTDYEPLLAESWTVSDDGKQYRFKLRPEVKFHSGNPFSCADVEYTFERNLV
TNLPSSGAWYISEPLLGTRDNAEADPSITWERIDKAVECEGNELVLNLARPEPYLLAR
LTYPGQAIVDKQYAASLGEWDGTEATWKDWVGKDLSESALNGKYSGTGPYRIVNSEND
TLTFASFADYWGGEPAIKNVVRRKVPEQASRIEALLKGDTDIAEVGSREVIETQLANQ
PGIQVVDDLPNLVSYALAMNQDTSKSQNTGSGTWGDGVPANFFADRDMRLCFTKAFDY
DTYIEQIFLGKAERRNTLMPPQLAGYDQNLANPSLNLDEATEHCKAAHGGEAWEKGFT
LNVAYREGTPQIQAAVEILKNNIEAMNPKFKVNPVEKQWSELISAANIEPMAYASWGS
GYADPDNYFRPFYHSQGYHGLKSHMNDKQLDQWIDEARLVTGTNPEQAAALYGQVAKR
AADEGYYIVLPIGVGIQAYRDNLQGVGANDYNVISGLFWKRLSKGGTQ"
gene 17138..18913
/locus_tag="DEIPR_RS13390"
/old_locus_tag="Deipr_2653"
/old_locus_tag="IO79_RS13255"
CDS 17138..18913
/locus_tag="DEIPR_RS13390"
/old_locus_tag="Deipr_2653"
/old_locus_tag="IO79_RS13255"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="M14 family metallopeptidase"
/protein_id="WP_013616009.1"
/translation="MTPQREDAAAASEQAGSWTWQGRTETAIVRHLLRKNISQPPRRL
RVWISEGATARLRLQQELQERWPACDIEVLSCYKPLVSRLVGQLPTWESRAPQTVDLQ
YPVLEDAHPERFLLEAYPLAGWLRNKGAVFTSQPLPMDEPLYCLTVDGSVTEIPVPVR
AATSVTGERVQRMTGRLVVDDQVLDFPTASEQLWEAYLGWLAEHEWPEAAPYFSALQV
TARFPFERESLNYRHEALDLGEALSEEFYFGTQEFFLTRAAVPGQRMLQTGQIVPLVT
SDDEVILEITLRDAQTSPIQACTELPALASLERPLSSDEIVGWQTVLARGQETETRSV
QGRVVMTFGQTDGSGSGMLVTAGQHANESTGVVAALRALDEIGDRSLLTVIPQENPDG
YALFEFLREAQHPEHMHHAARYTALGDDLEYRQFSPWYEKGGRREAMQCHGPQVHVNL
HGYPAHEWTRPMNGYIPRGFEAWTLPKGFFLILRAQPEAQRLAEDLADYVTVRLSENE
ALMTFNRDQCEVFAAHSSERPYRMLHGTPCTFSERANLSCQIELITEFPDETVTGPDF
LLGQQVQFAVIEAALSWLQTRQRMS"
gene complement(20858..21106)
/locus_tag="DEIPR_RS13400"
/old_locus_tag="Deipr_2654"
CDS complement(20858..21106)
/locus_tag="DEIPR_RS13400"
/old_locus_tag="Deipr_2654"
/inference="COORDINATES: protein motif:HMM:NF024252.2"
/GO_function="GO:0003677 - DNA binding [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="helix-turn-helix transcriptional regulator"
/protein_id="WP_083801597.1"
/translation="MQLDNPGQERRFLLRRKEIGKRVRRIREERGWTQDTLAHISGLN
RSYPYRIEEGLVDVRLSTLLKISEALEIDVVALLNDDT"
gene 21170..21739
/locus_tag="DEIPR_RS13405"
/old_locus_tag="Deipr_2655"
CDS 21170..21739
/locus_tag="DEIPR_RS13405"
/old_locus_tag="Deipr_2655"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_013616010.1"
/translation="MHLVDLMQPLEGHVQQGLVGRFELHATGLGGFRTTPEGRWRLEA
ALLRLIQLELCHPMHRDIGNTNPALEYSDLLPRYRELMEAVAAWQLYKFGDESYDEVY
KEVASHRKHFPGQERAVGVVVGLMHLEGNRWLGECHPIYFRSDKRVVMDAQGNFDRPQ
SEIESYAKALINALEAEFKIRGAEYDRYW"
gene 21762..22791
/locus_tag="DEIPR_RS14455"
/old_locus_tag="Deipr_2656"
CDS join(21762..22253,22255..22791)
/locus_tag="DEIPR_RS14455"
/old_locus_tag="Deipr_2656"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_076612365.1"
/ribosomal_slippage
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/note="programmed frameshift; Derived by automated
computational analysis using gene prediction method:
Protein Homology."
/codon_start=1
/transl_table=11
/product="IS630 family transposase"
/protein_id="WP_218921250.1"
/translation="MRCSTLGIVEWQPNQYSRAQLEERRLAATEWLQQGSHTHREIAA
HFGVSVLTVTSWSARLRTKGSLQATVSSGRPARLTESQHDQLRTLLREGALQHGFPDE
TWTTKRVAELIGRHFEVWYHHDHVRKILRKLGFSPQMPDGRAAERSELRIASWREQVL
PELEKKVAEGATIIYLDEVGFSLKGVRRRTWSPRGVTPLVTLRANWEKLSTIGAITSD
GRFFQHTTSGAIRSGEVIRFFGHILRQVQGNVVVVLDNARIHHAKVTQAFVASHERLS
PVFLPPYAPELNPIELVWAYVKRNVLGNFCAHSIRALKKRLVTAWQRVRYIHLPRQLM
DANLRRYQ"
gene 23202..24098
/locus_tag="DEIPR_RS13415"
/old_locus_tag="Deipr_2657"
/old_locus_tag="IO79_RS14115"
CDS 23202..24098
/locus_tag="DEIPR_RS13415"
/old_locus_tag="Deipr_2657"
/old_locus_tag="IO79_RS14115"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_013615974.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="DNA/RNA non-specific endonuclease"
/protein_id="WP_013616011.1"
/translation="MKRTLTSLTLPLLLAACSAPPTEQAVTTSTTTTETVTITPAPGT
TTDPASTSTDQAAAPATEDGCLKLAYPLPISYKGDPLNTLCNGYYTAGYSELDQLTRV
TAEQLTPNMLEGNTSRTDDFREDDRLHSTLRPTLNDYAGSGYDRGHLAPAADFKFSPT
AMSQSFLLSNVAPQNPELNQGPWAGLESATRACARETAEPGGLTVLTGTLGDTGKLKD
DQVTIPAAFFKLWYSKEKNDYRLWVLPNTSLPKMSGAEYRKYEVPLHQFREFWSDFPG
APTQLAEQQYGTLCPGVMPLKQ"
gene 24169..24948
/locus_tag="DEIPR_RS14685"
/old_locus_tag="Deipr_2658"
CDS 24169..24948
/locus_tag="DEIPR_RS14685"
/old_locus_tag="Deipr_2658"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="helicase-related protein"
/protein_id="WP_013616012.1"
/translation="MTHPHPDFPAEEARLGSTIQAMIRRIRILEDRERHGGADEHTSL
VMADDAEERAAVLSPHVHSPYFGRMTVRIRGKERTLYIGKHAFGNPKYGVTSWRSDVG
GLFYTDQLQWQAAGNTGTVLHKRQLDVQNKRLLDITDLYTGENKGEQAQQEGSSEGAG
RRKVLLKRLSEHATAGMRDVVETLQPAQYDAMTADPQRFQIVQGSAGAGKTTVGFHRL
AWLCAPDRPESVRAAPDRILALMPNDILAAYASRVLPGLEL"
gene 24979..26271
/locus_tag="DEIPR_RS14690"
/old_locus_tag="Deipr_2659"
CDS 24979..26271
/locus_tag="DEIPR_RS14690"
/old_locus_tag="Deipr_2659"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="putative UvrD/rep helicase family protein"
/protein_id="WP_013616013.1"
/translation="MLSFLGLEKMQVTDRTLTLLLADQNNARRASAWKRAKALGRASI
YDLIHEHVRQELWERLHKVAEPSFDVPGRGSTGPIPRADLWELIEGALSQPGATERFE
AGLRELILRRTNASEADLRPLEKDISRVVTSLFGRMLPVSETRRLLGNEALLERAKVA
EPLRRTLLSDPLSAIPLPKGSSVDVTELPAILALRCILHGLGERWDHILLDEAQDFQP
LLYRLLAQATRPGQLTALGDLSQGLAGYKGPANWEEVQQALGGADVSFLPMTYRSTAP
ISEASARIAATYSKVIHSEHIGREGDPVQLLEGELDTVAGHVQALQDAGYANIALVTR
RTIDAQRLPDALAPFDLDVQAITEPQHRYKGGLVSIPVQYAKGLEFDGCVVMDADPQS
YDPGTEYDSRLLYVAASRGLHHLAFYSGGGFHPLVQGA"
gene complement(26476..27102)
/locus_tag="DEIPR_RS13425"
/old_locus_tag="Deipr_2660"
/old_locus_tag="IO79_RS13280"
CDS complement(26476..27102)
/locus_tag="DEIPR_RS13425"
/old_locus_tag="Deipr_2660"
/old_locus_tag="IO79_RS13280"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_001549957.1"
/GO_function="GO:0000150 - DNA strand exchange activity
[Evidence IEA]"
/GO_function="GO:0003677 - DNA binding [Evidence IEA]"
/GO_process="GO:0006310 - DNA recombination [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="recombinase family protein"
/protein_id="WP_013616014.1"
/translation="MGQRAAIYCRVSTGDQSCDRQERDLRAFAERGGYEIMGVFKETA
SGSKDQRAQRGKVVALARDRHIQVVLVTELTRWGRSTTDLLHSLRELEACGVSVIAQT
GLQFDLSSPQGKLFASLMAALAEFERDLLRERVKSGIAAARERGVQFGRQPGQRVKAE
RYTVRVLRLRAEGRSYREIARELRLSKNTVMDIVKRASPSAPGEDEAA"
gene complement(27213..27683)
/locus_tag="DEIPR_RS13430"
/old_locus_tag="Deipr_2661"
/old_locus_tag="IO79_RS13285"
CDS complement(27213..27683)
/locus_tag="DEIPR_RS13430"
/old_locus_tag="Deipr_2661"
/old_locus_tag="IO79_RS13285"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_018385313.1"
/GO_function="GO:0003677 - DNA binding [Evidence IEA]"
/GO_function="GO:0003700 - DNA-binding transcription
factor activity [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="Rrf2 family transcriptional regulator"
/protein_id="WP_013616015.1"
/translation="MKLSQGVEWCLHAVVLLGQLPQGTVLPRTLMAQHHGLPDDYLAK
YLKQLVRAGVLMASTGPRGGYRLARPAERITAWEVIEAIEGGQSFFHCQEIRQCGTGA
ARPAECTEPCAIHQMMHSAFLTWKDQLSQTTVADLVQQVPEHVRERNRQGLLNA"
gene 27864..28628
/locus_tag="DEIPR_RS13435"
/old_locus_tag="Deipr_2662"
/old_locus_tag="IO79_RS13290"
CDS 27864..28628
/locus_tag="DEIPR_RS13435"
/old_locus_tag="Deipr_2662"
/old_locus_tag="IO79_RS13290"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_019928389.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="SDR family oxidoreductase"
/protein_id="WP_013616016.1"
/translation="MDKRSTIALITGAGGGIGSAIVRRLSRDHLVALHYGADLESTQA
LQRDIEQSGGQAFLFHTDLSRPDAGTEFWAAYEHAANAAQVADLPISVLVNTAGIARR
GEIEHLSDEDFDRQHQVNTRAPYMILKHGLGRLSDGGRVVNISSSVTHIAYPDLVAYA
MSKAAIDALTHTLAQQLGPRGITVNAVAPGVVDTNINADWLKNNPEAQQYVGSQAALG
RVAQPEDIADVVAFLASDSARWITGQVIVATGGAHL"
gene 28643..29254
/gene="pdxH"
/locus_tag="DEIPR_RS13440"
/old_locus_tag="Deipr_2663"
/old_locus_tag="IO79_RS13295"
CDS 28643..29254
/gene="pdxH"
/locus_tag="DEIPR_RS13440"
/old_locus_tag="Deipr_2663"
/old_locus_tag="IO79_RS13295"
/EC_number="1.4.3.5"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_017870462.1"
/GO_function="GO:0004733 - pyridoxamine-phosphate oxidase
activity [Evidence IEA]"
/GO_function="GO:0010181 - FMN binding [Evidence IEA]"
/GO_process="GO:0008615 - pyridoxine biosynthetic process
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="pyridoxamine 5'-phosphate oxidase"
/protein_id="WP_013616017.1"
/translation="MQHSISHPEGWQADPLDQFQIWFAAMIDAGQPEPYTMQLATADV
AGLPSVRTIYLRGDPSQGLTFYTNMHSQKARELDENPQAEAVFYWPQLAQQVRAAGRV
TRVSPEQADRAFHQQPHEIQVAAHVNLQQSQPVDLEGLESRLAEMAVKFPAGETVPRP
KYWGGFRLEVNRWEFWQGRANGLHDRFAYVLGREGWVIHRLTP"
gene 29430..29858
/locus_tag="DEIPR_RS14785"
CDS 29430..29858
/locus_tag="DEIPR_RS14785"
/inference="COORDINATES: protein motif:HMM:NF025079.2"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="DUF4158 domain-containing protein"
/protein_id="WP_049775341.1"
/translation="MQNSSGSLFTSAQRDQFTRFPEIDERTFSRYYLLDAADLRLVRE
RRRDFNKLGFAVQLTVLRHLGRGLRPGETPPEAVLAYLAEQLRVDSACYTQYAAREPT
RREHLPCVSGWGTSSCHAARALSCATGWCRWPSLPTSLSH"
gene 29780..32368
/locus_tag="DEIPR_RS13450"
/old_locus_tag="Deipr_2664"
/old_locus_tag="IO79_RS13305"
CDS 29780..32368
/locus_tag="DEIPR_RS13450"
/old_locus_tag="Deipr_2664"
/old_locus_tag="IO79_RS13305"
/inference="COORDINATES: protein motif:HMM:NF033527.1"
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="Tn3 family transposase"
/protein_id="WP_169310717.1"
/translation="MSRRQGAELRDWLVPLAVVTDQPFPLMSALMDEVRRRHLLVPRF
SVLERLVRSARVRADQHTYGVLNLPLKGDLPDRVDALLSPQGDEPVSRFAWLARPVGA
PKPKHILTLLDKLAFVRTFPVQSNLQAFLPQSRLEHLAEEARRLSASHLADFEPRRRR
ATLMARLLDLSETLTDAVLDMHDRVMVPLLREGERAAAEVFGQQGPPLVEQFGTFKSV
CAAVIAAREQGADPYQAIEAVVNWQQLVETVREKEVVSAEQLDPLHHAIKGYAKVRSY
APRLLAAFTFHAEGKAVPVVEALNLLREMYAANKRTLPEHVPIGFVRQKWAGQVFRAG
AVDRRAYELCVLDELRLALRAGDVWVAGSRKYKDLDAYLLPQGTWQKRLPKLSLDLPE
TFDAFWAATEPRLTEQLREVADLLARGELSSVSVQRGRLRIGKVTRAVPDEVEPLGRR
LSARLPRVKITDLLLEVNAWTRFTGAFLNLHSGKEAERHDHLLTAILADGLNLGLTKM
AEASPDPGMTARRLMYLADWFLRPDSYAAGLAELVNFQSKLPLAALWGDGTTSSSDGQ
RFPTGGRGKTFGYLNAKYGREPGILFYTHVSDQYAPFHTKVITANVRDALHVLDGLLY
HLSELKIKEHYTEQVFALCHLLGFRFAPRIRDLGETRLYTPEVASAYGLLEPLVAQRL
NLRLIREHWDELRRLTTSIKAGTVTASLMLSKLASYPRQNGLALALRELGRVQRTLFT
LEWLRDPELRRRVLAGLNKGEALHALKRAVAFHRSGEIRDQSFEAQSNRASGLNLVTT
AIAVWNTVYLGRAVEALRAEGVDVSDELLAHVSPLSWEHIGLTGDYVWHPEGVPVEGT
YRALRE"
gene complement(32710..33718)
/locus_tag="DEIPR_RS14460"
/old_locus_tag="Deipr_2665"
CDS complement(join(32710..33246,33248..33718))
/locus_tag="DEIPR_RS14460"
/old_locus_tag="Deipr_2665"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_076612365.1"
/ribosomal_slippage
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/note="programmed frameshift; Derived by automated
computational analysis using gene prediction method:
Protein Homology."
/codon_start=1
/transl_table=11
/product="IS630 family transposase"
/protein_id="WP_218921249.1"
/translation="MSGWQPSHFSRAQLEERRLAALEWIKRGEHKNQEIADHFGVSVH
TVYTWKARLKQNGSLQATVARGTSSRLTPAQHEQLRTLLREGALQHGFPDETWTTKRV
AELIGRHFEVWYHHDHVRKILRKLGFSPQMPDGRAAERNELRIASWREQVLPELEKKV
AEGATVIYLDEVGFSLKGVRRRTWSPRGVTPLVGLRANWEKLSTIGAITSDGRFFQHT
KSGAIRSADVTRFFQHLLRQVQGNVVVVLDNARTHHAKSTQAFVASHERLSLVFLPPY
APELNPIELVWAYVKRNVLGNFCAHSVSALKEKLHRAWQRVRYVQLPLHLMNSNLRRY
Q"
gene 33819..34667
/locus_tag="DEIPR_RS13460"
/old_locus_tag="Deipr_2667"
CDS 33819..34667
/locus_tag="DEIPR_RS13460"
/old_locus_tag="Deipr_2667"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_009764920.1"
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="IS5 family transposase"
/protein_id="WP_013616019.1"
/translation="MGMSSVYSSDLTNAEWMILEPLFPPVCSTGRPRKWSWRDILNGI
FYVLRGGIAWRLMPHDLPPWQTVYHYHRLWRKQGLWKAIHAVLRERVRVQAGHSPTPS
AGIIDSQSVKTTEAGGPRGYDGGKKVNGRKRHILVDTMGLVMAIKVHEADYQDRAGAI
LLLRDLPNVFPRMQHLWADQGYTGKLGAEIRKHLGWTLEIVKHPWSGRQSTWAPKDAP
PPPVEVPTGFVVLKRRWVVERTFAWIGKSRRMSRDYEALSETSENLVYEVMIRLMVKR
LAKIVT"
gene 35003..35986
/locus_tag="DEIPR_RS13465"
/old_locus_tag="Deipr_2668"
/old_locus_tag="IO79_RS13325"
CDS 35003..35986
/locus_tag="DEIPR_RS13465"
/old_locus_tag="Deipr_2668"
/old_locus_tag="IO79_RS13325"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_010886790.1"
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="IS4 family transposase"
/protein_id="WP_041222302.1"
/translation="MIAARSINHHDLSPHMPGISTPQAKKRRADRTFRDEQLDMDFFI
ALLVVHLPPGKVLLSLDRTNWEHGETPINFLVLGAVVHGFTLPLIWVPLDESGNSHTY
ARMWLVLKLLRVLPAKRWQGLVADREFIGAEWFRFLRRQGIKRAIRIRHSDMLDDMNG
KEWFKHVQHGHFHEIDEKVFVFGELMRVVATRSSTGDLVIIATDFSARKTWKLYKQRW
SIECTFSSFKKRGFDLERTGITERSRLQRLFGLVTLAWMFCLRLGVWLGQTHPIPVLK
HGRREVSLVRHGAQHLVDALRWKPKQFMAVLDLLTQPFCPPGGAGSEVVTY"
gene complement(36114..36983)
/locus_tag="DEIPR_RS13470"
/old_locus_tag="Deipr_2669"
CDS complement(36114..36983)
/locus_tag="DEIPR_RS13470"
/old_locus_tag="Deipr_2669"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_013616005.1"
/GO_process="GO:0015074 - DNA integration [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="integrase core domain-containing protein"
/protein_id="WP_013616020.1"
/translation="MDELLACYQELLGDHPKLSLSRFAGEVERPYHVLRDARQNAQRS
AQRTERRQHILEVVRFKALEEPLSGYRLIYQALQQDAQQPSPGLHTVRRHMAELKVQR
PVPRKKRRPSACPTSIVLWPAGRRVQVDATRLSLPDGICWAYLVLDVESRALLHIEVV
RNLSASSAVTALQRGVYVLHHLGIHEQLLIMTDGGSDFTSGAFQAACQELGNWVRAKV
SRKGGMGILERLNRTFKYDGVFREELTNIAQLRAFSTKFKNWYNSERRHSSLGYAYPW
VKLLEATESSNVA"
gene complement(36986..37273)
/locus_tag="DEIPR_RS13475"
/old_locus_tag="Deipr_2670"
/old_locus_tag="IO79_RS13335"
CDS complement(36986..37273)
/locus_tag="DEIPR_RS13475"
/old_locus_tag="Deipr_2670"
/old_locus_tag="IO79_RS13335"
/inference="COORDINATES: protein motif:HMM:NF013677.2"
/GO_function="GO:0003677 - DNA binding [Evidence IEA]"
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/GO_process="GO:0006313 - transposition, DNA-mediated
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="transposase"
/protein_id="WP_013616021.1"
/translation="MGKQRKTWSPELKEQIVLAVLSGERTIAEAAREYEVSESLIHTW
RAQFLEAGRARLQGARPDAAQKKLEKEVQQLKAIIADKELSLYIAKKIRGL"
gene 37719..38258
/locus_tag="DEIPR_RS13480"
/old_locus_tag="Deipr_2671"
/old_locus_tag="IO79_RS13340"
CDS 37719..38258
/locus_tag="DEIPR_RS13480"
/old_locus_tag="Deipr_2671"
/old_locus_tag="IO79_RS13340"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_017872031.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="CueP family metal-binding protein"
/protein_id="WP_013616022.1"
/translation="MQKQTLLTIGFIPLSSLALALALAQSSSPLPDQLKGVSPLKAMQ
LANSWKGTAVKSFVDDSAVQFTFPDGRQQSVPLPAKQMVIAIAPYVNQTHPCKTHFMS
GCQGELVNTPVKVQVTNAAGKTVINRTVKTLPNGFLELWLDRNQTYNVTLSAQGRSVK
GQLQTLKGSDTCVTTLRLQ"
gene 38459..38944
/locus_tag="DEIPR_RS13490"
/old_locus_tag="Deipr_2673"
/old_locus_tag="IO79_RS13345"
CDS 38459..38944
/locus_tag="DEIPR_RS13490"
/old_locus_tag="Deipr_2673"
/old_locus_tag="IO79_RS13345"
/inference="COORDINATES: protein motif:HMM:NF015658.2"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="DUF305 domain-containing protein"
/protein_id="WP_148232023.1"
/translation="MMGGMSGMSEMMGGMNAQNIDRNFITMMIPHHQSAIDMSQLILK
TTKDPQVKTWATNIIRDQQREINQMQAMVGQFGGPMQGMGQQMDQMMGDMTTPINQAT
NKDKAFVEGMIPHHGMAVMMANHLLMQSKNPVMQKMGRDIITAQAQEIYEFQQYLNKT
K"
gene 39016..39681
/locus_tag="DEIPR_RS13495"
/old_locus_tag="Deipr_2674"
/old_locus_tag="IO79_RS13350"
CDS 39016..39681
/locus_tag="DEIPR_RS13495"
/old_locus_tag="Deipr_2674"
/old_locus_tag="IO79_RS13350"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_013616025.1"
/GO_function="GO:0003677 - DNA binding [Evidence IEA]"
/GO_process="GO:0000160 - phosphorelay signal transduction
system [Evidence IEA]"
/GO_process="GO:0006355 - regulation of DNA-templated
transcription [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="response regulator transcription factor"
/protein_id="WP_013616025.1"
/translation="MPNILIVDDDPAILEILRAYLKAEGHTVLEACDGYSAREQLPRA
DLAILDWMLPGVSGVDLAREARASGLTLPILMLTARGEEEDKLRGLDFGVDDYVVKPF
SPREVVARVRALLRRVGVQEEIAVGDLRIDLRGHSASLSGERLELSKLEFDLLSALAQ
HPGMAWPRERLLERVWGSDFPGTERVVDVHITGLRKKLGDTSDTPRFIETVRGVGYRF
REE"
gene 39685..40800
/locus_tag="DEIPR_RS13500"
/old_locus_tag="Deipr_2675"
/old_locus_tag="IO79_RS13355"
CDS 39685..40800
/locus_tag="DEIPR_RS13500"
/old_locus_tag="Deipr_2675"
/old_locus_tag="IO79_RS13355"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_013616026.1"
/GO_function="GO:0000156 - phosphorelay response regulator
activity [Evidence IEA]"
/GO_function="GO:0004673 - protein histidine kinase
activity [Evidence IEA]"
/GO_function="GO:0005524 - ATP binding [Evidence IEA]"
/GO_process="GO:0007165 - signal transduction [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="HAMP domain-containing sensor histidine kinase"
/protein_id="WP_013616026.1"
/translation="MRFFPRLLLSHLLVILLAVLGMFLSAELVAPNFYREHVNRMAAM
MTGMIGTANHELRLDLETGLRTTLTSALLASLPLAGGVAIVTAWLVSRRLGRSVQLLD
EGSRALAQGNYARRLPETGQDELSDLAHNFNVMAGALEQVEQGRVELIGNVAHELRAP
LAALRGYADAMQDGVMTPEHAAQSISREIGAMDRLVRDLSLVSRVEAGKVELHLKAID
PQGLLQIMRERFATPFEDKGVQLQITDAVLPQIKADEERTLQVLTNLLSNALRHTPAG
GKVSVTVQTEAALLKFNVQDTGTGIPAEHLPRIFERFYRADPARSRNEGGSGVGLTIA
KGLVEAMGGEMWVVSNVGQGSVFSFTLPTFTVLKSNS"
gene complement(41401..41802)
/locus_tag="DEIPR_RS13510"
/old_locus_tag="Deipr_2676"
/old_locus_tag="IO79_RS13365"
CDS complement(41401..41802)
/locus_tag="DEIPR_RS13510"
/old_locus_tag="Deipr_2676"
/old_locus_tag="IO79_RS13365"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_013616027.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_013616027.1"
/translation="MNTISAMLSTHPKPGKFDSGSLAECISACLECTGCCTICADACL
NETEHLAHLTKCITLNGQCADVCAATAGVLSRVGQGDEAVIRAQLQACVAACQACAQE
CESHAKMGMKHCEICAECCRRCEAACQKLLA"
gene 41995..42177
/locus_tag="DEIPR_RS14070"
CDS 41995..42177
/locus_tag="DEIPR_RS14070"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_148232024.1"
/translation="MKTRFGVLTILLASNVVAQDTMPGMNMGTPTAPSIHDQHHPAAS
PNISSLPETPIRVLSG"
gene complement(42217..42930)
/locus_tag="DEIPR_RS13515"
/old_locus_tag="Deipr_2677"
CDS complement(42217..42930)
/locus_tag="DEIPR_RS13515"
/old_locus_tag="Deipr_2677"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012173261.1"
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="IS6 family transposase"
/protein_id="WP_013616028.1"
/translation="MPADPKPYRHRFPKSIIQHAVWLYHRFTLSYRDIEELLFQRGIQ
VSHETIRDWCDKFGPNLTKELKKREPQRGSRWHLDEVCVKIKGVKQWLWRAVDEHGAV
LDVLLQEHRDTEAAKTFFATLLITNEVPTAIHTDKLGSYSAAIRELPELHGAEHREVI
STARCNNLVEQSHRPTRSQERSQKGFKSISRAQNFLDLHARTSNLHQHTRTTVTAETR
RSNQKAAFQTWNEVALLAA"
gene complement(42952..43916)
/locus_tag="DEIPR_RS13520"
/old_locus_tag="Deipr_2678"
/old_locus_tag="IO79_RS13375"
/pseudo
CDS complement(42952..43916)
/locus_tag="DEIPR_RS13520"
/old_locus_tag="Deipr_2678"
/old_locus_tag="IO79_RS13375"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_002707056.1"
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/note="frameshifted; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="IS1595 family transposase"
gene complement(44551..45135)
/locus_tag="DEIPR_RS13525"
/old_locus_tag="Deipr_2679"
/old_locus_tag="IO79_RS13380"
CDS complement(44551..45135)
/locus_tag="DEIPR_RS13525"
/old_locus_tag="Deipr_2679"
/old_locus_tag="IO79_RS13380"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_017871113.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="DUF305 domain-containing protein"
/protein_id="WP_229782317.1"
/translation="MKPKKTILLTATAVLLAFPLAQAQGMNHSSMHMSDMSSMDLSGM
KKLQGKAFDRAFMSAMIPHHQAAVDMAKAVLPVSKDATVKTWANAVIKDQNREINQMS
AWLKANGGTDANMAKMMSGSMQGMASMVKSSKTPDVAFVQGMIPHHASAVDMANLALQ
QGSDQTVLKLARDIVKAQAQEMYDYRQWLKKRGL"
gene 45209..45909
/locus_tag="DEIPR_RS13530"
/old_locus_tag="Deipr_2680"
/pseudo
CDS 45209..45909
/locus_tag="DEIPR_RS13530"
/old_locus_tag="Deipr_2680"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_076612277.1"
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/note="frameshifted; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="IS1 family transposase"
gene <45923..46309
/locus_tag="DEIPR_RS13535"
/old_locus_tag="Deipr_2681"
/old_locus_tag="IO79_RS13390"
/pseudo
CDS <45923..46309
/locus_tag="DEIPR_RS13535"
/old_locus_tag="Deipr_2681"
/old_locus_tag="IO79_RS13390"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_076612299.1"
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/note="incomplete; partial in the middle of a contig;
missing N-terminus; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="IS1 family transposase"
gene 46787..48157
/locus_tag="DEIPR_RS13540"
/old_locus_tag="Deipr_2682"
/old_locus_tag="IO79_RS13395"
CDS 46787..48157
/locus_tag="DEIPR_RS13540"
/old_locus_tag="Deipr_2682"
/old_locus_tag="IO79_RS13395"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012694762.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="replication initiator protein A"
/protein_id="WP_013616030.1"
/translation="MPLNEKTAATQIDELNLSQLNLISAVDKAENSEWEVSYEHGGRV
VQIRCEALPKYSVPHGLDNDVSAALINLFMDSGMPEDGRFTISATALLRLCGWHNTGH
YHATLKTSLERLHTSSYTVSGGWRDHPRGRWTHAKFHFIESLQFTTAGSGQFDERTVI
KGRLADALIESLRGGYVKPLDSEFMLSLSRPRTRVLYRILDGARYDPENLEQYRDQYE
VGLLAWAEQCRIPNSVPGNVRRALSGPHEELVERGYLRSVTISGRGKQQRIRYEFNEN
FIQVNPALLQRLQGYGIADGVARRLSNELGSAALHAHMDRFDWLVRTGVLVVKKSRAA
ALMHLIQHPDEYPYPLQAPEKAEKAPAKAKAARNPEPLLEPPSVAQEFAKLSVEEAAE
RGISRLGFHFRQDLSPLLLDQLRQAFLDGRLSPAAVLEDAMAAVARMKKAEFLEALRE
KLELRH"
gene complement(48224..49147)
/locus_tag="DEIPR_RS13545"
/old_locus_tag="Deipr_2683"
/old_locus_tag="IO79_RS14125"
CDS complement(48224..49147)
/locus_tag="DEIPR_RS13545"
/old_locus_tag="Deipr_2683"
/old_locus_tag="IO79_RS14125"
/inference="COORDINATES: protein motif:HMM:TIGR00180.1"
/GO_function="GO:0003677 - DNA binding [Evidence IEA]"
/GO_process="GO:0000910 - cytokinesis [Evidence IEA]"
/GO_process="GO:0007059 - chromosome segregation [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="ParB/RepB/Spo0J family partition protein"
/protein_id="WP_013616031.1"
/translation="MSARKPSSQLAAIVAAAQSNVEGIRQNEGERRAARQLPIGQISP
SPYQARRDFSNLASLVEDIREHGVLQPILVRPLGEDRFELIAGERRWRASQEAGLTKI
PAVVREFTDREALLVGLAENLQREDLNAYEIARAVIELAAAELEQPADKVRKALSSKR
PEEEVLRAMDAALGLLNKDMTLRTYQRHYLPLLRLDPHLIEAIEHGASYAAVLLIRGV
EKRQQQQWLPKLVSGEWSRSDLEEALRKHRSAAKAKPVPHEEYDWGSKAQEVQQGLTE
ERLRQLDGRQQRKARRLLEQLAELLGESTVR"
gene complement(49144..49911)
/locus_tag="DEIPR_RS13550"
/old_locus_tag="Deipr_2684"
/old_locus_tag="IO79_RS13405"
CDS complement(49144..49911)
/locus_tag="DEIPR_RS13550"
/old_locus_tag="Deipr_2684"
/old_locus_tag="IO79_RS13405"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_013623169.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="AAA family ATPase"
/protein_id="WP_013616032.1"
/translation="MTQQARTQVIMTFIHAGGAGKTTTTRDIGAELARRGYRILLVDL
DPQANLTYWLGVVGLPVEQTIVPVLRDGAPLPTPQHAFGMDIIPSHLDLAQVDVLLAA
LHNPEGRLKKAIDKVRASGDYDFILLDAPPSLGKLTANGANAADWLIVPLPASRKGLD
AIAGVREAIERYSDTNENLEVAMYLVTQATHNNTSRDVQDAYSQLIGEQLAGPIIHRP
AIYGDAQVESRPIEPKQKEAHAEIAAAVDALLSRVQA"
gene complement(50443..51561)
/locus_tag="DEIPR_RS13555"
/old_locus_tag="Deipr_2685"
/old_locus_tag="IO79_RS14130"
CDS complement(50443..51561)
/locus_tag="DEIPR_RS13555"
/old_locus_tag="Deipr_2685"
/old_locus_tag="IO79_RS14130"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_013616033.1"
/translation="MPLLFVHGVAIRQEDAPEFKTLHSLTSGVDWTAISALLREYVAP
VMRPDAPQDVSLEWLYWGDLGATYRGGGRFRGTFEPESPPVPHPLEASAQAQAQWLED
RLLPQTPAALWPATIEAAALTAEDQTVRLLAAELSEPARSEVLLAAVEARRQNHTTLR
STPQLSALLLRWEERRRGRLQQAFRGVRRPLEDFGPIFLGDALTYFTLRGTPEQPGPV
LERVLAALQQADATAKRSGEPLVVLSHSLGGQLVYDVLSSVVPARPDLADLRVDLWCA
VGSQLGLFKELGLMLEDHFPASTNHADASPLLNHLGYLWNVWSYGDLLSFRAEGSIPS
AHDAPFPLGGQVQDEHLAYFHQPHFYAALAAKLRSLTR"
gene complement(51759..52985)
/locus_tag="DEIPR_RS13560"
/old_locus_tag="Deipr_2686"
/old_locus_tag="IO79_RS13415"
CDS complement(51759..52985)
/locus_tag="DEIPR_RS13560"
/old_locus_tag="Deipr_2686"
/old_locus_tag="IO79_RS13415"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_019009217.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="DUF790 family protein"
/protein_id="WP_013616034.1"
/translation="MLPTELLSFGVKGGVVTPRRLKPTEGNLQLAETLTGTFEEHLGR
PRFELDEALAEIERGRRDFKVIRGLAHLLTQQSTFEAAGGVPPERVREKVFALAQEGI
PSRRRTAQVLETARRELGINDSQNLSHLLYADLPDQQTMTQAPQLSPTELIQRYDLAN
AQGMLYRAYSLVITARRNQPARYKQLLQYTKFFGLMLTVEGDPKFGFTLTMDGPSSLL
GSTTRYGLAMAKFLPALLHVTKWDLTAEIKARKDLAWVDPKDDVWTFELTSEDGYVSH
YREPEEHDSALEAGFAERFSRLDTEWTLEREVDLVPVPGGVILPDFRLEHPDGRSVLV
EIVGYWRPEYLRKKFELLRKSGRDDVIVCVSERLNLDKAGVKHSDFRGRTVWFKGVLK
PQDVLALAEAGVAKEA"
gene complement(52972..54393)
/locus_tag="DEIPR_RS13565"
/old_locus_tag="Deipr_2687"
/old_locus_tag="IO79_RS13420"
CDS complement(52972..54393)
/locus_tag="DEIPR_RS13565"
/old_locus_tag="Deipr_2687"
/old_locus_tag="IO79_RS13420"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_013558293.1"
/GO_function="GO:0003677 - DNA binding [Evidence IEA]"
/GO_function="GO:0005524 - ATP binding [Evidence IEA]"
/GO_function="GO:0016787 - hydrolase activity [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="DEAD/DEAH box helicase family protein"
/protein_id="WP_280985228.1"
/translation="MRLNKPVLRLDRGTLVMQEPPEVVGDHFTWDQRSQSYRARGMDY
RDIALGLREAGIAFEDRAKAFGELNLTYTREITPYPHQAAALTAWKQAGRRGVVVLPT
GAGKTLVAQLALKDTPRSALICVPTLDLLQQWYSGLLAAFPDTNIGLLGGGSHDESPL
LVSTYDSAAIYAEELAGRYATLIFDEVHHLPSDFHRSVAEMCIAPYRLGLTATPKRSD
GREADLGRLVGPVVYSVSPDELSGDTLADYREVIIRVKLSPTEQQRYDECMALRNEYL
RMTGIRIGSIEGWQQFIRSSGTLEGRRAFLAHREAKSIAYGTEGKLRVLEEILAQHPS
ERTIIFTNDNATVYRISREFLIPSITHQTPTKERHTLLERFRAGEYRLLVTSRVLNEG
VDVPEASVAVVLSGTSTEREHIQRLGRILRRAQGKKAVLYEVITEGTTEERISQQRRG
QWQPAGEAGPDIGPIWETLNAPD"
gene complement(54384..54623)
/locus_tag="DEIPR_RS14295"
CDS complement(54384..54623)
/locus_tag="DEIPR_RS14295"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_169310718.1"
/translation="MAMSDQKERLSLSGNPEPEVVDILWMDDRHVHVLCSDGDEVTWP
IGVMVEHLQGVQRLQIRVIDGDLDLVPLYTEVVCA"
gene 55775..56783
/locus_tag="DEIPR_RS14470"
CDS join(55775..56245,56247..56783)
/locus_tag="DEIPR_RS14470"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_076612365.1"
/ribosomal_slippage
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/note="programmed frameshift; Derived by automated
computational analysis using gene prediction method:
Protein Homology."
/codon_start=1
/transl_table=11
/product="IS630 family transposase"
/protein_id="WP_218921248.1"
/translation="MSGWQPSHFSRAQLEERRLAALEWIKRGEHKNQEIADHFGVSVH
TVYTWKARLKQNGSLQATVARGASSRLTPAQHEQLRTLLREGAMQHGFPDETWTTKRV
AELIGRHFEVWYHHDHVRKILRKLGFTPQMPDGRAAERNELRIASWQEQVLPELEKKV
AEGATVIYLDEVGFSLKGVRRRTWSSRGVTPLVGLRANWEKLSTIGAITSDGRFFQHT
KSGAIRSADVTRFFQHLLRQVQGNVVVVLDNARTHHAKSTQAFVASHERLSLVFLPPY
APELNPIELVWAYVKRNVLGNFCAHSVSALKEKLHRAWQRVRYVQLPLHLMNSNLRRY
Q"
gene complement(56766..57296)
/locus_tag="DEIPR_RS14080"
/old_locus_tag="Deipr_2690"
CDS complement(56766..57296)
/locus_tag="DEIPR_RS14080"
/old_locus_tag="Deipr_2690"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_169310719.1"
/translation="MCQHSSGRLSLSSHFHKPPCFIFFCDLDNVSFNLSGTESDVDVC
VVMTDVFWGDFTEAPGENLESYGFLPSNRMYEDDRELVRRALVQKFGSSGFTSGKKAF
DVHGVAGSRVDADVVPAWLFRSFHGRGIYGQPIAREGIAFWTTDGKQVINVPEQHIIM
GRQKTTQPTTALLITA"
gene 57344..58347
/locus_tag="DEIPR_RS13585"
/old_locus_tag="Deipr_2691"
/old_locus_tag="IO79_RS13430"
/pseudo
CDS 57344..58347
/locus_tag="DEIPR_RS13585"
/old_locus_tag="Deipr_2691"
/old_locus_tag="IO79_RS13430"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_013614240.1"
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/note="frameshifted; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="IS4 family transposase"
gene 58403..59077
/locus_tag="DEIPR_RS13590"
/old_locus_tag="Deipr_2692"
/old_locus_tag="IO79_RS13435"
CDS 58403..59077
/locus_tag="DEIPR_RS13590"
/old_locus_tag="Deipr_2692"
/old_locus_tag="IO79_RS13435"
/inference="COORDINATES: protein motif:HMM:NF015658.2"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="DUF305 domain-containing protein"
/protein_id="WP_013616037.1"
/translation="MKRIGMLAAAAIASGALAMTTIPNLMAGGGQPTVTTSVNAQSPM
NQMPAMGQMMDHSQMHMGQQMGAGDMMSMMGGLETMSGQKLDRAFLSMMIPHHQAAVE
MSQEILKTTQDAQVKAWAEGIIAAQKTEISQMTTMLQPYGGPDIGMAAEMDGMMTGMV
SEIQQAKDKDAAFVKGMIPHHGSAIMMANIALLKSENPEVLALARDITRAQAQEIYDF
QMYLLQ"
gene 59101..59766
/locus_tag="DEIPR_RS13595"
/old_locus_tag="Deipr_2693"
/old_locus_tag="IO79_RS13440"
CDS 59101..59766
/locus_tag="DEIPR_RS13595"
/old_locus_tag="Deipr_2693"
/old_locus_tag="IO79_RS13440"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_013616025.1"
/GO_function="GO:0003677 - DNA binding [Evidence IEA]"
/GO_process="GO:0000160 - phosphorelay signal transduction
system [Evidence IEA]"
/GO_process="GO:0006355 - regulation of DNA-templated
transcription [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="response regulator transcription factor"
/protein_id="WP_013616038.1"
/translation="MSQVLIVDDDPAILEILQAYLVAEGHTVLSASDGFGAREGLPRA
DLAIIDWMLPGVSGMDLVREARAADMQLPILMLTARGEEEDKLRGLDFGVDDYVVKPF
SPREVMARVRALLRRVGVREEVSIGDLSIDLRSHTASLSGLPLELSKLEFDLLTALAQ
HPGMAWTRERLLERVWGSDFLGTERVVDVHITGLRKKLGDTSDNPQFIETVRGVGYRF
REE"
gene 59770..60867
/locus_tag="DEIPR_RS13600"
/old_locus_tag="Deipr_2694"
/old_locus_tag="IO79_RS13445"
CDS 59770..60867
/locus_tag="DEIPR_RS13600"
/old_locus_tag="Deipr_2694"
/old_locus_tag="IO79_RS13445"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012695243.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="ATP-binding protein"
/protein_id="WP_013616039.1"
/translation="MRFFPRLLLSHLLVILLAAFGIFLLAEWLAPTFYRDHVDHMTQM
IATPGEAGSVLRADLEQGLRTTLTRALLASLPLAGGAALFAAWLMSRRMGRSVQLLDE
GSRAIAQGDYASRLPEAGQDELSDLAHNFNVMAGTLEKVEQGRIELIGNVAHELRAPL
AALQGYADAMQDGVMTSEHAARAISREVGAMDRLVRDLSLVSKVEAGKMELYSITMSP
QELLEAAQERFMPFFEDKGVTLVVEVAPLPLLWADKERSLQVLANLLSNALRHTPPRG
QVTVTAKTQGRAVRFMVADTGSGISGEHLPRIFERFYRADPARSRGEGGSGVGLTISR
GLVEAMGGEIEVDSTPGKGSTFAFTLPLAQP"
gene 60923..63280
/locus_tag="DEIPR_RS13605"
/old_locus_tag="Deipr_2695"
/old_locus_tag="IO79_RS13450"
CDS 60923..63280
/locus_tag="DEIPR_RS13605"
/old_locus_tag="Deipr_2695"
/old_locus_tag="IO79_RS13450"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_013156685.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="copper-translocating P-type ATPase"
/protein_id="WP_013616040.1"
/translation="MTHQRTQRGVLEVALKNCSGGTDLQGAEDFLQRLPGVSSVYLDR
TRSVAHLGYDPAQTSEQTLRTRIEQASYVCSCQKCSPSQSQPGQPAIGHEQHQHAHHH
SAAPHAGHQMSHAGHDEHAGHGAAMVNDMLRRFVVSLILTLPIVLYSPIGEAIGFRAM
PPFGLGMNWFGLILATPVVWWGGWPFISAAWRALRRGEANMMTLIALGILVSYLYSLW
ATAALSSQDVFFEAAAMLTTLSLLGHWLEMRSRFATGRAVEALLKLAPATARVVRDGQ
EVEVPVEQVIAGDIIAIRPGDRLPVDGEVVSGESYVDESMISGEPVPVAKTSGSKVTG
GTVNQNGAFQFRATAVGADTALSRIVQMVQNAQASKAPAQQLADTAGKYLVFVALGSG
LLAFIIWTLLGQDIIFALTVAVSAIVIACPDALALATPTAITVGVGRGAKEGVLFKNA
GALEANASVNTVIFDKTGTLTEGKPALTDLIPVQGTSETELLHFAASADQLSQHPLAE
AIVRGAEEQGVVLSQTQAFNSLSGLGVEAQIDGVQVLIGNRKLMEQQQIRTAGLTSQA
EQLATDGKTTMYVAADGRLLGLVAVADRTRESAKVAVQSLHELNIQIVMLTGDNRTTA
EAVARQLGIDTVIADVLPEQKADKVKDLQAQGRKVAMVGDGVNDAPALAQAEVGVAIG
AGTDVAVETADVVLMKSDPASVATSISLSRQVQSKIKQNLFWAAIYNLLAIPVAAGAL
YPSMGLLLRPEWAALLMSASTLIVTFNALLLNTTRLDSTHRLSPS"
gene complement(63310..64010)
/locus_tag="DEIPR_RS13610"
CDS complement(join(63310..63776,63776..64010))
/locus_tag="DEIPR_RS13610"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_076612299.1"
/ribosomal_slippage
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/note="programmed frameshift; Derived by automated
computational analysis using gene prediction method:
Protein Homology."
/codon_start=1
/transl_table=11
/product="IS1 family transposase"
/protein_id="WP_148231767.1"
/translation="MPECPACQSTHTVKNGKAKNGTQTYLCKGCGRRFHPEARPIAHS
EATRQQILDAVHERMSLRGVQRVFGVHRNTVIRWNKKGAREVMQTGTVCMTPPEEVVI
ELDEMWTFVAKKKQTRWIWIALERSTRRVLAWVLGDRSEQTAFKLWERLPLSLEQRLK
GTFCTDLWRAYDEPLLGVKRLTRKGETNHVERLNCTLRQRLGRLVRKSLSFSKTDEML
EASLTLAFHRYNLSR"
gene complement(64340..65278)
/locus_tag="DEIPR_RS13615"
/old_locus_tag="Deipr_2698"
/old_locus_tag="IO79_RS13460"
/pseudo
CDS complement(64340..65278)
/locus_tag="DEIPR_RS13615"
/old_locus_tag="Deipr_2698"
/old_locus_tag="IO79_RS13460"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_010886790.1"
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/note="frameshifted; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="IS4 family transposase"
gene 65174..65434
/locus_tag="DEIPR_RS14695"
CDS 65174..65434
/locus_tag="DEIPR_RS14695"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_245532776.1"
/translation="MDDEQSDEKVHVQLLIPEGSVRPSFLGLRRADTGHVRTQVVMID
APRGNHRQKHIDQPLKGVNAEVTRVYFEVAGQYGSLLGSGFC"
gene 65647..66669
/locus_tag="DEIPR_RS13620"
/old_locus_tag="Deipr_2699"
/old_locus_tag="IO79_RS13465"
CDS 65647..66669
/locus_tag="DEIPR_RS13620"
/old_locus_tag="Deipr_2699"
/old_locus_tag="IO79_RS13465"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_013614240.1"
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="IS4 family transposase"
/protein_id="WP_041223171.1"
/translation="MDRLRCVAEVLFGILQAESTLHRKIALHIGRAATTPSITRMVAR
VLHGAGLTQQDIQDVLLPLLPEEKLTLIMDRTNWKHGQSHLNLLVIGVVLGNVTLPLA
WKELKHGGNSESRARMMLVGQLLKRLPARRWKVLIADREFLGQEWFTFLRRSGIKRCI
RIRANTVVDGEYARDCFASLEPGQTRALFEKVWVQGDWMRVVATLSPEGERVIVASDL
SVWDTLNVYRQRWAIETTFSAMKSRGLNLEQTHMINPERVGNLFGLLTLALTWMLRAG
EWRTEQQPIRVKTHGRPAVSRARYGYEELSRTLRCGGEKFRLFLDLLKTPFPAPGGDA
RQPVRY"
gene 66644..68077
/locus_tag="DEIPR_RS13625"
/old_locus_tag="Deipr_2700"
/old_locus_tag="IO79_RS13470"
CDS 66644..68077
/locus_tag="DEIPR_RS13625"
/old_locus_tag="Deipr_2700"
/old_locus_tag="IO79_RS13470"
/inference="COORDINATES: protein motif:HMM:NF025056.2"
/GO_function="GO:0003953 - NAD+ nucleosidase activity
[Evidence IEA]"
/GO_function="GO:0005515 - protein binding [Evidence IEA]"
/GO_process="GO:0007165 - signal transduction [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="toll/interleukin-1 receptor domain-containing
protein"
/protein_id="WP_013616044.1"
/translation="MQGNLSGTEAWNDDQDGGEHKARVRRLADELIAEYGIEVLLDQY
VLQPGVDADAYMEGIANSNRIDKVIAICEPNYVTKANERKGGVGKEGVIMSPQLYEQL
QGGLSVEQRFVAVMFSGDQKPTMFGNSIHINMRDEQEWTDNIETLVRFIYNKPLAVPP
PRGSRPAFLDEDPELAVSSGTAAMRGLRHAATAGRTVRPALRDLHSQALTLIRETDAL
EQYSASAVLTALDTLTPMQITLVEAFKLLSIHETLQIGDWLNLLDGLSQAIEEKSHYS
GVYDHVRLFQHELLLHVVAAAIELEQLDFLTALFKHPFMSRRSGQVHLVTFTNMRFNP
ETFDPAYARESGSRWLSSTAHVLLQRGEQRNVSRALLVEAEVLLILAALLANMQRQGS
SAPRIMNWYPTVTIHAEGAGDLPLFQRWISSASIERWGSIYGLGNDYDLAAPVLKSVF
QEQLLSFYDRDSSLAYYSQVDRWGSQP"
gene complement(68180..68563)
/locus_tag="DEIPR_RS13630"
/old_locus_tag="Deipr_2701"
/old_locus_tag="IO79_RS13475"
CDS complement(68180..68563)
/locus_tag="DEIPR_RS13630"
/old_locus_tag="Deipr_2701"
/old_locus_tag="IO79_RS13475"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_013616045.1"
/translation="MSRDPELDRSLSAAWQSLEQKAAQEGHRPRIAQRVAALLPPDLA
PAVLERERLGVLKYGQYLDDNHQPQRARAVHLVQELLDGANYALWLASPIRSRLLAVL
LAFLVKWLCRRYHLTAQDIIDGGKR"
gene complement(68560..69129)
/locus_tag="DEIPR_RS13635"
/old_locus_tag="Deipr_2702"
/old_locus_tag="IO79_RS13480"
CDS complement(68560..69129)
/locus_tag="DEIPR_RS13635"
/old_locus_tag="Deipr_2702"
/old_locus_tag="IO79_RS13480"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_013616046.1"
/translation="MTDPNLLIFAAERTYAINGTNGWHDGYTQADAFTKISLISTEVR
EWQLESRPGNEQQALNELADIIIRTMDTCELLERGGFALALVMAGPCRHHPHHNNLLH
MVTMYGLIEDAKQAFRKAPAGEMPANAADAGPEVLNAVLPHLGGLALYALMLLEHYAA
RENLTAQDVITRVLDKNATRGYRHGGRRL"
gene 69219..69479
/locus_tag="DEIPR_RS13640"
/old_locus_tag="Deipr_2703"
/old_locus_tag="IO79_RS13485"
CDS 69219..69479
/locus_tag="DEIPR_RS13640"
/old_locus_tag="Deipr_2703"
/old_locus_tag="IO79_RS13485"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012814599.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="DUF4160 domain-containing protein"
/protein_id="WP_013616047.1"
/translation="MPELTRFFGIRITMYFSDHNPPHFHAEYGDDEAVFGIQELAVLE
GQLSKRATRLVLEWAAMHQAELMEAWNAASNNEAPGKISPLE"
gene 69491..69997
/locus_tag="DEIPR_RS13645"
/old_locus_tag="Deipr_2704"
CDS 69491..69997
/locus_tag="DEIPR_RS13645"
/old_locus_tag="Deipr_2704"
/inference="COORDINATES: protein motif:HMM:NF021873.2"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="DUF2442 domain-containing protein"
/protein_id="WP_013616048.1"
/translation="MKKITAVSAGEGYTLHLTFEDGVRVHADISRLMERPGVFAPLQD
RAYFEGVRCGPRGRSVTWEDGQDLDPDVFYMEDTDPRKPTNIRTLSRTAPRANPLSEQ
LRELVAASGESQAEIARRAGMPQQSLSRLLDPDYTGHSWSSVERVAQALGREIKVEFQ
PLKTGTHS"
gene complement(70064..70600)
/locus_tag="DEIPR_RS13650"
/old_locus_tag="Deipr_2705"
/old_locus_tag="IO79_RS13495"
CDS complement(70064..70600)
/locus_tag="DEIPR_RS13650"
/old_locus_tag="Deipr_2705"
/old_locus_tag="IO79_RS13495"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="VRR-NUC domain-containing protein"
/protein_id="WP_013616049.1"
/translation="MSRAAELLAQVRELDARLAEQGRDAAEKLWDEDHHQITLVSWAR
NHLGDLPELRLLHHSPNGGKRQTVTRRGRTYSPEGAKFKRMGTRAGYPDLLLDVPLHG
YHGLRIELKDLKGNTPSPEQRGWIVAHRQKGYAADVARGWRQGRIQLLAYLAGEVHEW
YWVPKKGTACELPGVGAG"
gene complement(70911..71327)
/locus_tag="DEIPR_RS13660"
/old_locus_tag="Deipr_2707"
/old_locus_tag="IO79_RS13500"
CDS complement(70911..71327)
/locus_tag="DEIPR_RS13660"
/old_locus_tag="Deipr_2707"
/old_locus_tag="IO79_RS13500"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_013616051.1"
/translation="MTVQEAQRFVGRMRGLLKPDGHDIFYLTNYCSRVLRVQVGHFRD
LDLQDAYTVARQATKEYPMNDSPPSQDTLQPTPHPKSSGLSGVPLEQVELLQDELRSA
LAELDECGPQAPGLEDRVAGYRTQLLNLGVSREAQP"
gene complement(71380..71943)
/locus_tag="DEIPR_RS13665"
/old_locus_tag="Deipr_2708"
/old_locus_tag="IO79_RS13505"
CDS complement(71380..71943)
/locus_tag="DEIPR_RS13665"
/old_locus_tag="Deipr_2708"
/old_locus_tag="IO79_RS13505"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_013616052.1"
/translation="MKSKHAETYSVPAPMCISERRYDCDYADDAPEPDYGHLFVKEGP
SMSNPLPGPAARAAADWWAQFLSAPGPGQPDPTRDVPGLTGALIQSACSHTRYTPAQV
RAFAAELAAIFQAQLDAGGRASAWTEYGPDEVLTYAARQAGFELDPLALPAKSFTLLQ
AGSGLVVTRLGPGGTPQILVPHVEAAS"
gene complement(72031..73446)
/locus_tag="DEIPR_RS13670"
/old_locus_tag="Deipr_2709"
/old_locus_tag="IO79_RS13510"
CDS complement(72031..73446)
/locus_tag="DEIPR_RS13670"
/old_locus_tag="Deipr_2709"
/old_locus_tag="IO79_RS13510"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_013616053.1"
/translation="MIRRRKKTQRFTQINNEPLRNSAMSLKAKGLLALMMSVPENWVF
NIAWLIKQSKDGRDATRAALKELEDHRYVIRRKVMSPPPKTQFVGWEWLVDDTPILDI
NPDSVVILEAEEDAENPQEEDAPKPGPRVKEGDADKEFPDLLETRLSAEEERDSRLTG
NPTVGNPDVGKSTTTNTDLFTNTEKEEEAPVPQAGEQAAAPNASSSEEASPDELLDAL
LGESEGGEVEGLSSQPTSDAPSRTPDLSEMTTGKGGQQEDQPTAVEKVPAAGGAAAAP
ANEVAAVNAQLDRYLNRRWLAPYQLGDTVMPPLSTEIVDGLDRAEIPQMVSLEQLREL
HNQTRRNISQRKREQATNPGLPGLNYTTELLRMLHEYVEQRLVVREMAQEYQADLRAE
AAAAAPQGESAGDLRISGHSEWQVGDQVIYMREPHEIVRITRLKITVALLSDRDIEHD
IIRSSMVQNTLRPYRPQQRTG"
gene complement(74061..74351)
/locus_tag="DEIPR_RS13680"
/old_locus_tag="Deipr_2711"
/old_locus_tag="IO79_RS13520"
CDS complement(74061..74351)
/locus_tag="DEIPR_RS13680"
/old_locus_tag="Deipr_2711"
/old_locus_tag="IO79_RS13520"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_013616055.1"
/translation="MTEVPTDHRPASEVVPELLAQAKQQPRCQLASGHHLMAYRSPNT
GRPALGFGLAYLYPSTGEVELLLRLLGWEGARTQKGAAQKHGCWWVFIEPPA"
gene complement(74344..75132)
/locus_tag="DEIPR_RS13685"
/old_locus_tag="Deipr_2712"
/old_locus_tag="IO79_RS14135"
CDS complement(74344..75132)
/locus_tag="DEIPR_RS13685"
/old_locus_tag="Deipr_2712"
/old_locus_tag="IO79_RS14135"
/inference="COORDINATES: protein motif:HMM:NF015340.2"
/GO_function="GO:0003677 - DNA binding [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="phage antirepressor KilAC domain-containing
protein"
/protein_id="WP_013616056.1"
/translation="MTIALSEQILPVHTEQGRLWVDARTLHAQLHVGRDFSTWIRSRL
EEVEAVENQDFIVLDGSPISGSKWGGANRRDYWLVLDIAKEIAMLERNEYGKAIRRYF
IEVERRYRERQAAALALPNFNDPVAAARAWADAKEREQQALVLAAENQEKAAGFDAFL
DSSGLYSMRNAAKLLGTGERKLFEILRDGGVLMSAARAGAENHNVPYQKHIDAGHFKV
KTSHSRDGEHVSRTPRVTPAGLEYLRRRFFPGVQLPLLLEDAGD"
gene 75667..76525
/locus_tag="DEIPR_RS13690"
/old_locus_tag="Deipr_2713"
/old_locus_tag="IO79_RS13530"
/pseudo
CDS 75667..76525
/locus_tag="DEIPR_RS13690"
/old_locus_tag="Deipr_2713"
/old_locus_tag="IO79_RS13530"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_013616019.1"
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/note="frameshifted; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="IS5 family transposase"
gene 76598..77032
/locus_tag="DEIPR_RS13695"
/old_locus_tag="IO79_RS13535"
CDS 76598..77032
/locus_tag="DEIPR_RS13695"
/old_locus_tag="IO79_RS13535"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_049775350.1"
/translation="MTTLDRQFLHPGYALSAAGWRQAVADEPQRGGLVTPFLTYVFYA
IVVQATGSVVQAFGLALAAMLLIPTLRWLTIAVLRLAGRARVVAFWLLSSMGFMVMTM
GAFGWWQGWDTLLAGVFAAVAALWAWRLWMGLSALRKYEVAH"
gene complement(77197..77601)
/locus_tag="DEIPR_RS13700"
/old_locus_tag="Deipr_2714"
/old_locus_tag="IO79_RS13540"
CDS complement(77197..77601)
/locus_tag="DEIPR_RS13700"
/old_locus_tag="Deipr_2714"
/old_locus_tag="IO79_RS13540"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_017300409.1"
/GO_function="GO:0016301 - kinase activity [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="type II toxin-antitoxin system death-on-curing
family toxin"
/protein_id="WP_013616057.1"
/translation="MTFSANWPMLEGLSREEVEALHDAQIERYGGSPGLRDPGLLESA
LAQPVQELFGQLRYPTVPAQAAAYLYYLSRAHAFVDANKRTSLSCALVWLALHDLRLR
LSQQELFDLTLAVAQGQLSLEETIERFERAVW"
gene complement(77570..77812)
/locus_tag="DEIPR_RS13705"
/old_locus_tag="Deipr_2715"
/old_locus_tag="IO79_RS13545"
CDS complement(77570..77812)
/locus_tag="DEIPR_RS13705"
/old_locus_tag="Deipr_2715"
/old_locus_tag="IO79_RS13545"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_014686953.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="AbrB/MazE/SpoVT family DNA-binding
domain-containing protein"
/protein_id="WP_013616058.1"
/translation="MRKTLSRIGNSEALVITKEMKELTGIGSEVQIEIQGNAIVITPA
QDASRPETLARQQRFTQARDQVLSEYDDLFRQLADA"
gene 77887..78474
/locus_tag="DEIPR_RS13710"
/old_locus_tag="Deipr_2716"
/old_locus_tag="IO79_RS13550"
CDS 77887..78474
/locus_tag="DEIPR_RS13710"
/old_locus_tag="Deipr_2716"
/old_locus_tag="IO79_RS13550"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012275131.1"
/GO_function="GO:0000150 - DNA strand exchange activity
[Evidence IEA]"
/GO_function="GO:0003677 - DNA binding [Evidence IEA]"
/GO_process="GO:0006310 - DNA recombination [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="recombinase family protein"
/protein_id="WP_013616059.1"
/translation="MLIGYARVSKGDQDSALQLKALQGAGVGQVFKEQASGGRWDRPE
LHKALEQLREGDVLVVWKLDRLSRSLKDLLTILEQIEQRGAGFRSLTENIDTTTPAGR
MMMQMVGSFAEFERAMIRERTKAGLEQARAAGRVGGRRPKLTAAQQEEIREAVKSGRK
TAAACARLFGVSQATVSRILAAEKIPSQLSSISPP"
gene 78761..>79330
/locus_tag="DEIPR_RS13715"
/old_locus_tag="Deipr_2718"
/pseudo
CDS 78761..>79330
/locus_tag="DEIPR_RS13715"
/old_locus_tag="Deipr_2718"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012695078.1"
/GO_function="GO:0003677 - DNA binding [Evidence IEA]"
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/GO_process="GO:0006313 - transposition, DNA-mediated
[Evidence IEA]"
/note="frameshifted; incomplete; partial in the middle of
a contig; missing C-terminus; Derived by automated
computational analysis using gene prediction method:
Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="transposase"
gene 79413..80193
/locus_tag="DEIPR_RS13720"
/old_locus_tag="Deipr_2719"
/old_locus_tag="IO79_RS13555"
/pseudo
CDS 79413..80193
/locus_tag="DEIPR_RS13720"
/old_locus_tag="Deipr_2719"
/old_locus_tag="IO79_RS13555"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_010884088.1"
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/note="frameshifted; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="IS5 family transposase"
gene 80150..81162
/locus_tag="DEIPR_RS14475"
/old_locus_tag="Deipr_2720"
/pseudo
CDS 80150..81162
/locus_tag="DEIPR_RS14475"
/old_locus_tag="Deipr_2720"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_076612365.1"
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/note="frameshifted; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="IS630 family transposase"
gene 81263..82090
/locus_tag="DEIPR_RS13730"
/old_locus_tag="Deipr_2721"
/old_locus_tag="IO79_RS13570"
CDS 81263..82090
/locus_tag="DEIPR_RS13730"
/old_locus_tag="Deipr_2721"
/old_locus_tag="IO79_RS13570"
/EC_number="3.4.-.-"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_006592278.1"
/GO_component="GO:0016020 - membrane [Evidence IEA]"
/GO_function="GO:0004222 - metalloendopeptidase activity
[Evidence IEA]"
/GO_process="GO:0071586 - CAAX-box protein processing
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="CPBP family intramembrane glutamic
endopeptidase"
/protein_id="WP_013616061.1"
/translation="MTTVALTYVAALGYAALNFPAGFPLSADAGAAAAPLWAIIGPPL
AAAALAAALPYHPQRLPVDAGEPRNLRLTAALLLALALAFPLLTQSTGMAGGYIAAKV
ALLIALPLVAVRLLPGAIRLPRLQARRLQGRPWWVPLGVVTFWFITSQLGPWNPLFDG
SAYDMTTIVVAALVTAVTAGFGEELFYRRLLQSRLEALLGAWPGIALASLAFALMHLG
SHGSADLPGTLARIIVAQGSFGLFAGVLWWRYRSLVWPVAAHLLVNGWGVVAYLLGL"
gene complement(82097..82660)
/locus_tag="DEIPR_RS13735"
/old_locus_tag="Deipr_2722"
/old_locus_tag="IO79_RS13575"
CDS complement(82097..82660)
/locus_tag="DEIPR_RS13735"
/old_locus_tag="Deipr_2722"
/old_locus_tag="IO79_RS13575"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_012639711.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="dihydrofolate reductase family protein"
/protein_id="WP_013616062.1"
/translation="MHTAAFLAASLDGFIAREDGALDWLPQPEAEGEDYGYTEFFARI
DALVMGRRTFEVVSGFTPWPYGDKPVVVLSRTLTPADLPVHLPLRLHAGPLLELLRQL
EAEGVRRVYADGGQVVQEFIRAGRLNELTLTTVPVLLGRGRPLFGAVGEDVPLELLES
RSFAGGLVQSRYAIAGRRVPDGEKGQS"
gene 82730..82960
/locus_tag="DEIPR_RS13740"
/old_locus_tag="Deipr_2723"
/old_locus_tag="IO79_RS13580"
CDS 82730..82960
/locus_tag="DEIPR_RS13740"
/old_locus_tag="Deipr_2723"
/old_locus_tag="IO79_RS13580"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_013616063.1"
/translation="MNITEIQQAFDAAYTQDPRDGLTIQHASEEGQLRIEVRHKDADG
ELRGFDVVVMPTDADERTAQDYGQAAAQVYEV"
gene complement(83328..83501)
/locus_tag="DEIPR_RS14300"
CDS complement(83328..83501)
/locus_tag="DEIPR_RS14300"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_169310720.1"
/translation="MVDDPSPTDGWLNLCHPIIAPVVDQSFQKKKKRFDDHHQGAVAN
AVLDGILSANFDK"
gene 83954..84487
/locus_tag="DEIPR_RS13750"
/old_locus_tag="Deipr_2725"
/old_locus_tag="IO79_RS13585"
CDS 83954..84487
/locus_tag="DEIPR_RS13750"
/old_locus_tag="Deipr_2725"
/old_locus_tag="IO79_RS13585"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_013616065.1"
/translation="MSGKIYDLRFEKGSFIDLYHHEPKQRAQARLGYYIAAVTHTDVY
HGADDTEPNDLNMRATPFIALKLFYVSKQQNLLSEKLKGLKITSVRKLYQALEEKQGT
LNTEQLTVLEQLGDLNAEFANYHLVTTLSMPRIITTDNELSSLFTVLRRLERTGNHLL
KKEKQRHEQAKRLAKRP"
gene 84560..84991
/locus_tag="DEIPR_RS13755"
/old_locus_tag="Deipr_2726"
/old_locus_tag="IO79_RS13590"
CDS 84560..84991
/locus_tag="DEIPR_RS13755"
/old_locus_tag="Deipr_2726"
/old_locus_tag="IO79_RS13590"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_013615942.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_013616066.1"
/translation="MSKRKHPKLRNIRKVMSSPACDLYVGGVPLEDAAWGYAAGVLKA
IHGYSDAEAATELSRRGIRLIVSGKGCLACGQPGQIISVFAGAEGSSRLERVIVYLLC
PQCGEQLSNPDFSDDLEQQLLAVSSTKPENKHPGQGQRILA"
gene 85244..>85330
/locus_tag="DEIPR_RS14090"
/pseudo
CDS 85244..>85330
/locus_tag="DEIPR_RS14090"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_076612299.1"
/note="incomplete; partial in the middle of a contig;
missing C-terminus; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="IS1 family transposase"
gene 85433..85720
/locus_tag="DEIPR_RS13760"
/old_locus_tag="Deipr_2727"
/old_locus_tag="IO79_RS13595"
CDS 85433..85720
/locus_tag="DEIPR_RS13760"
/old_locus_tag="Deipr_2727"
/old_locus_tag="IO79_RS13595"
/inference="COORDINATES: protein motif:HMM:NF013677.2"
/GO_function="GO:0003677 - DNA binding [Evidence IEA]"
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/GO_process="GO:0006313 - transposition, DNA-mediated
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="transposase"
/protein_id="WP_013616006.1"
/translation="MGKQRKTWSPEVKEQIVLAVLSGEQTIAEAAREYEVSESLIHTW
RAQFLEAGRARLQGARPDAAQKKLEKEVEQLKAIIADKELSLYIAKKIRGL"
gene 85753..86589
/locus_tag="DEIPR_RS13765"
CDS 85753..86589
/locus_tag="DEIPR_RS13765"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_013616020.1"
/GO_process="GO:0015074 - DNA integration [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="integrase core domain-containing protein"
/protein_id="WP_013616005.1"
/translation="MLEDHPKLSLSKFASEVERPYHVLRDARQNAERSAQRTERCQHV
LEAVRLRALEEPLSGYRLIYQALQDVLRPAPGLHTVRRCMVELKVQRPVPRKKRRPAV
NPTPVVLWPAGRRIQIDATRLRLPDGICWAYLVLDVESRALLHIEVVRQLSASSAVTA
LQRGVHVLHHLGIHDPLLVMTDGGSDFTSGAFQAACQELGNWVRAKVSQKGGMGILER
LNRTFKYDGVFREELTDIAQLRAFSTKFRDWYNSGRRHSSLGYAYPWVKLLAATESSN
VA"
gene 86902..87915
/locus_tag="DEIPR_RS13775"
/old_locus_tag="Deipr_2729"
/old_locus_tag="IO79_RS13605"
CDS 86902..87915
/locus_tag="DEIPR_RS13775"
/old_locus_tag="Deipr_2729"
/old_locus_tag="IO79_RS13605"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_013614240.1"
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="IS4 family transposase"
/protein_id="WP_083801601.1"
/translation="MRCVSEVLFGILQAESTLHRKIALHIDRAATTPSITRMVARVLH
GAGLTQQDILDVLLPLLPEGKLTLIMDRTNWKHGQSHLNLLVIGVVLGNVTLPLVWKE
LKHGGNSESRARMMLVGQLLGRLPARRWKVLIADREFLGLEWFTFLRRSGIKRCIRIR
ANTVVDGEYARDCFASLEPGQTRALFEKVWVQGGWMRMVATLSPEGERVIIASDLSVW
DTLNVYRQRWAIETTFSAMKSRGLNLEQTHMTNPERVGNLFGLLTLALTWMLRVGEWR
TEQQPIRVKTHGRPAVSRARYGYEELSRALRWGGEKFRLFLDLLRTPFPAPGGDERQP
VRY"
gene complement(87905..88684)
/locus_tag="DEIPR_RS13780"
/old_locus_tag="Deipr_2730"
/old_locus_tag="IO79_RS13610"
CDS complement(87905..88684)
/locus_tag="DEIPR_RS13780"
/old_locus_tag="Deipr_2730"
/old_locus_tag="IO79_RS13610"
/inference="COORDINATES: protein motif:HMM:NF033516.0"
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="IS3 family transposase"
/protein_id="WP_245532775.1"
/translation="MAAHLRDFRLDVMCRVLQVTPSGFRNWRRRPLSTRKIEDERLKL
LIKDLHGEHKGRYGAPRIQIELAELGHHHSIRRIARLMRDLGLYGKTRRKFVKTTDSR
HSLAVAPNLVDRNFTPETPNTVWASDITSIPTKEGWLYLAVTMDLFARTIVGWSMDHT
MTAELPLGALNMAVSRRSPPAGLIHHSDRGSQYASHLFRTALKDNEMLCSMSRKGDCW
DNAVVESFFETLKRELVDGCVYRSHEEARKAIFEYVEVLST"
gene complement(88696..88995)
/locus_tag="DEIPR_RS13785"
/old_locus_tag="Deipr_2731"
CDS complement(88696..88995)
/locus_tag="DEIPR_RS13785"
/old_locus_tag="Deipr_2731"
/inference="COORDINATES: protein motif:HMM:NF013677.2"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="IS3 family transposase"
/protein_id="WP_013616069.1"
/translation="MTTRKTYTAEFKRQAIDLAAREDVGPIRAARDLGISPSVLYRWR
LQAQKAGQAAFPGQGRTTLTPQEQEIQRLRKENEILRQEREILKKAAAFFAKENL"
gene complement(89097..89333)
/locus_tag="DEIPR_RS13790"
/old_locus_tag="Deipr_2732"
CDS complement(89097..89333)
/locus_tag="DEIPR_RS13790"
/old_locus_tag="Deipr_2732"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_006470258.1"
/GO_function="GO:0015036 - disulfide oxidoreductase
activity [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="glutaredoxin family protein"
/protein_id="WP_013616070.1"
/translation="MPKVILYATPTCPDCHALRLWFNRKGIEFEERNLTIPAVADEAK
ARYGVRVAPITVVGDQFFYGTFEQQRPELEPLFA"
gene complement(89399..89662)
/locus_tag="DEIPR_RS13795"
/old_locus_tag="Deipr_2733"
CDS complement(89399..89662)
/locus_tag="DEIPR_RS13795"
/old_locus_tag="Deipr_2733"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_011529241.1"
/GO_function="GO:0003677 - DNA binding [Evidence IEA]"
/GO_function="GO:0046872 - metal ion binding [Evidence
IEA]"
/GO_process="GO:0006355 - regulation of DNA-templated
transcription [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="metal-sensing transcriptional repressor"
/protein_id="WP_013616071.1"
/translation="MPEDSRKRAARRLAIARGHLESIRLSLEKDDVYCVDVLRQIKAV
QGALDGAATVILRGHLEAHVATAATRGDEKERVDELMEVLKYV"
gene 89750..90450
/locus_tag="DEIPR_RS13800"
/old_locus_tag="Deipr_2734"
CDS join(89750..89984,89984..90450)
/locus_tag="DEIPR_RS13800"
/old_locus_tag="Deipr_2734"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_076612299.1"
/ribosomal_slippage
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/note="programmed frameshift; Derived by automated
computational analysis using gene prediction method:
Protein Homology."
/codon_start=1
/transl_table=11
/product="IS1 family transposase"
/protein_id="WP_148231767.1"
/translation="MPECPACQSTHTVKNGKAKNGTQTYLCKGCGRRFHPEARPIAHS
EATRQQILDAVHERMSLRGVQRVFGVHRNTVIRWNKKGAREVMQTGTVCMTPPEEVVI
ELDEMWTFVAKKKQTRWIWIALERSTRRVLAWVLGDRSEQTAFKLWERLPLSLEQRLK
GTFCTDLWRAYDEPLLGVKRLTRKGETNHVERLNCTLRQRLGRLVRKSLSFSKTDEML
EASLTLAFHRYNLSR"
gene complement(90478..91404)
/locus_tag="DEIPR_RS13805"
/old_locus_tag="Deipr_2735"
/old_locus_tag="IO79_RS13635"
CDS complement(90478..91404)
/locus_tag="DEIPR_RS13805"
/old_locus_tag="Deipr_2735"
/old_locus_tag="IO79_RS13635"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_019010851.1"
/GO_function="GO:0004803 - transposase activity [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="IS4 family transposase"
/protein_id="WP_013616072.1"
/translation="MIAARSINHHDLSAHMPGISMPQAKKRRADRTFRDEQLDMDFFI
ALLVVHLPPGKVLLSLDRTNWEHGETPINFLVLGAVVHGFTLPLIWVPLDESGNSHTY
ARTWLVLKLLRVLPAKRWQGLVADREFIGAEWFRFLRRQGIKRAIRIRHSDMLDDMSG
KEWFKYVWQGHFHEIDEKVFVFGELMRVVATRSPVGDLVIIATDFSARKTWKLYKQRW
SIECTFSSFKKRGFDLERTGMTERSRLQRLFGLVTLAWMFCLRLGVWLSQTQPIPVLK
HGRRAVSLVRHGAQHLVDALRWNPKQFMDVLG"
gene 91695..92330
/locus_tag="DEIPR_RS13810"
/old_locus_tag="Deipr_2736"
/old_locus_tag="IO79_RS13640"
CDS 91695..92330
/locus_tag="DEIPR_RS13810"
/old_locus_tag="Deipr_2736"
/old_locus_tag="IO79_RS13640"
/inference="COORDINATES: protein motif:HMM:NF012655.2"
/GO_function="GO:0003677 - DNA binding [Evidence IEA]"
/GO_function="GO:0003700 - DNA-binding transcription
factor activity [Evidence IEA]"
/GO_process="GO:0006355 - regulation of DNA-templated
transcription [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="TetR/AcrR family transcriptional regulator"
/protein_id="WP_013616073.1"
/translation="MTAPSMSKPTAVQQRTFEHLITTAERLMNSGTTPSVAELAEAAS
VSRATAYRYFSSQADIVSALASHTMIPIRYWEPVTQDARARLHELLDFTFSQLTDAEV
HHWAILQVHLTNWAEAYPEQATPNRGHRRELLWRAVEPLVGQLPQVHLERLVQTLSPF
FGIELFLVFRDMWGLDDSAVLDRAHWMIDSLYERALADAAGSGHQSKEPPK"
gene complement(92358..93152)
/locus_tag="DEIPR_RS13815"
/old_locus_tag="Deipr_2737"
/old_locus_tag="IO79_RS13645"
CDS complement(92358..93152)
/locus_tag="DEIPR_RS13815"
/old_locus_tag="Deipr_2737"
/old_locus_tag="IO79_RS13645"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_011313787.1"
/GO_function="GO:0005524 - ATP binding [Evidence IEA]"
/GO_function="GO:0022857 - transmembrane transporter
activity [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="ABC transporter permease"
/protein_id="WP_013616074.1"
/translation="MSLAASSPGAQGKSGRPFPFPVELLGLLGLGLLWWLLTLPAVTG
NPFLEQFSPGAALPALTRLLAEGTLWEHLLVSLKRVMVGLGLAFVIGAPLGLLVGSSR
LLERATEPAFQLLRMISPLSWMPLAVMVLGVGDAPIYLLLALAGLWPILFAAAGGVKN
LNASWLDLGRSLSATRGEMFWHITLPGILGSLLQGVRLAIGTLWILLVPCEMLGVRAG
LGYFILDTRDRLAYPELMATVVLIGLLGYLLDAAARWLVGRFQGNT"
gene complement(93149..94348)
/locus_tag="DEIPR_RS13820"
/old_locus_tag="Deipr_2738"
/old_locus_tag="IO79_RS13650"
CDS complement(93149..94348)
/locus_tag="DEIPR_RS13820"
/old_locus_tag="Deipr_2738"
/old_locus_tag="IO79_RS13650"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_011061468.1"
/GO_component="GO:0055052 - ATP-binding cassette (ABC)
transporter complex, substrate-binding subunit-containing
[Evidence IEA]"
/GO_function="GO:0042626 - ATPase-coupled transmembrane
transporter activity [Evidence IEA]"
/GO_function="GO:0140359 - ABC-type transporter activity
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="ABC transporter substrate-binding protein"
/protein_id="WP_013616075.1"
/translation="MCHDHASAFTAPYSRREFVRLAGLLSASAGSAALLGGCAPRQPD
PDEPVRVGYLPITDAAPLLAMHGLGYLEAEGLSAEKPRLFRSWSQLVEAFVFGHVNVV
HLLSPLPIWMRYSAQVPTRIVAWSHVDGSALTVAPDITEVSDLAGRTVALPFWYSVHN
VLAQRLLREAGLNPVVNARDVRGERDVQLVVMAPSDMVPALKAGQIAGFVVAEPFGAL
AESLGVGRVQRLSGDVWKEHACCVVTMHDRDIAGRPDWTQKVVNALTRAQLWLNSHPA
EAAHLLSAEGEQRYTPHKPAVLGRVLQHELPAQYLQSGAVQHPEWQERRIAFRPYPYP
TYTEELVRQLREVRVEGDTTFLQRLDPAQVAREVVTDRFVTQAMQAQGGPASRTETFS
APAQGPV"
gene complement(94408..95226)
/locus_tag="DEIPR_RS13825"
/old_locus_tag="Deipr_2739"
/old_locus_tag="IO79_RS13655"
CDS complement(94408..95226)
/locus_tag="DEIPR_RS13825"
/old_locus_tag="Deipr_2739"
/old_locus_tag="IO79_RS13655"
/EC_number="7.6.2.14"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_016705144.1"
/GO_function="GO:0005524 - ATP binding [Evidence IEA]"
/GO_function="GO:0016887 - ATP hydrolysis activity
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="ABC transporter ATP-binding protein"
/protein_id="WP_013616076.1"
/translation="MTAAPVLSSRNLAVRYGSQTVLQGFDLQVAPGEIVAVLGASGVG
KSSLLRILAGLQPAGAGEVQLKGQRLTRPHPAMAFAFQTPSLLPWLNVERNVAFGLDF
RHQPALDPAERRRRVAQVLAEVGLEGQGRRFPAQLSGGMAQRAALARSFARQPEVLLL
DEPFSALDEVRRSEMQTLLLALLQRHQTAVVLITHDIDEALLLADRVVLLGRPAHETS
ARQLREWTLDLPRPRAAHSEQLSRLRTEVLRCLFEVQQGNWAASPEGPPQALVS"
gene complement(95223..96338)
/locus_tag="DEIPR_RS13830"
/old_locus_tag="Deipr_2740"
/old_locus_tag="IO79_RS13660"
CDS complement(95223..96338)
/locus_tag="DEIPR_RS13830"
/old_locus_tag="Deipr_2740"
/old_locus_tag="IO79_RS13660"
/EC_number="1.-.-.-"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_017904449.1"
/GO_function="GO:0016491 - oxidoreductase activity
[Evidence IEA]"
/GO_function="GO:0050660 - flavin adenine dinucleotide
binding [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="acyl-CoA dehydrogenase family protein"
/protein_id="WP_013616077.1"
/translation="MSRFTALHQWLEDHAAQLDAGDPQVSAELLPQLASAGLFRLGVP
TEYGGAGGSITEAIEALASVAERSLTAAFVGWGQRTFIEYLLTGRSAGPLREQLLPGL
LSGEIAGASGLSNAMKFLSGIEQISLSGRPDAAGWTVDGALPWVTNLRTQDQGFWAAA
MVAAPAGSPHPLVAVSPAHTPGLTRTPDLDLVALRGSATAQLRFEQAQVAEHHVLDPD
AADYLPRVRPAFLGLQLALPLGLASRSLAEARARLARFDTSVLHGPVADTQAELDALS
RQLHSGLAAGKFVKDCAELFRLKVALVETASRAVDLELQATGGLAYLSGRADGLMRRW
REQAFLPLITPSVVQLQTQLAQAGQPYGGTPARQAAV"
gene complement(96438..97022)
/locus_tag="DEIPR_RS13835"
/old_locus_tag="Deipr_2741"
/old_locus_tag="IO79_RS13665"
CDS complement(96438..97022)
/locus_tag="DEIPR_RS13835"
/old_locus_tag="Deipr_2741"
/old_locus_tag="IO79_RS13665"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_020086315.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="carboxymuconolactone decarboxylase family
protein"
/protein_id="WP_013616078.1"
/translation="MTVPDSSKARRLSVHTVESAPEGSRAQLEAVQKRNGGYLPNLLG
VLSNSPTVLESYLTLSKLNGKTSLTPDEREVVQLMAATTHGCSFCVAGHTLTAQKTTK
LSAEDIEALRGHKTLQDSKLAALASYTSAVIANRGAVSDEELQAFFDAGYDQAQALEV
VLGVGLATICNFGNNVAQTTLNPELEPYRWDGLS"
CONTIG join(CP002540.1:1..97188)
//
