LOCUS NC_015165 40303 bp DNA circular CON 20-OCT-2023
DEFINITION Phocaeicola salanitronis DSM 18170 plasmid pBACSA01, complete
sequence.
ACCESSION NC_015165
VERSION NC_015165.1
DBLINK BioProject: PRJNA224116
BioSample: SAMN00713589
Assembly: GCF_000190575.1
KEYWORDS GSC:MIGS:2.1; RefSeq.
SOURCE Phocaeicola salanitronis DSM 18170
ORGANISM Phocaeicola salanitronis DSM 18170
Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae;
Phocaeicola.
REFERENCE 1 (bases 1 to 40303)
AUTHORS Lucas,S., Copeland,A., Lapidus,A., Goodwin,L., Pitluck,S.,
Kyrpides,N., Mavromatis,K., Ivanova,N., Mikhailova,N., Teshima,H.,
Misra,M., Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L.,
Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D.,
Gronow,S., Wellnitz,S., Brambilla,E., Klenk,H.-P. and Eisen,J.A.
CONSRTM US DOE Joint Genome Institute (JGI-PGF)
TITLE The complete sequence of plasmid1 of Bacteroides salanitronis DSM
18170
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 40303)
AUTHORS Lucas,S., Copeland,A., Lapidus,A., Goodwin,L., Pitluck,S.,
Kyrpides,N., Mavromatis,K., Ivanova,N., Mikhailova,N., Teshima,H.,
Misra,M., Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L.,
Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D.,
Gronow,S., Wellnitz,S., Brambilla,E., Klenk,H.-P. and Eisen,J.A.
CONSRTM US DOE Joint Genome Institute (JGI-PGF)
TITLE Direct Submission
JOURNAL Submitted (17-FEB-2011) US DOE Joint Genome Institute, 2800
Mitchell Drive, Walnut Creek, CA 94598-1698, USA
COMMENT REFSEQ INFORMATION: The reference sequence is identical to
CP002531.1.
URL -- http://www.jgi.doe.gov
JGI Project ID: 4087335
Source DNA and organism available from Hans-Peter Klenk at the
German Collection of Microorganisms and Cell Cultures (DSMZ)
(hans-peter.klenk@dsmz.de)
Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)
David Bruce (microbe@cuba.jgi-psf.org)
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LANL
Annotation by JGI-ORNL and JGI-PGF
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. It is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
The annotation was added by the NCBI Prokaryotic Genome Annotation
Pipeline (PGAP). Information about PGAP can be found here:
https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
##MIGS-Data-START##
investigation_type :: bacteria_archaea
project_name :: Bacteroides salanitronis BL78, DSM 18170
collection_date :: isolated by P. T. N. Lan
lat_lon :: Missing
depth :: Missing
alt_elev :: Missing
country :: Japan
environment :: Host
num_replicons :: 4
ref_biomaterial :: DSM 18170, CCUG 54637, JCM 13657
biotic_relationship :: Free living
trophic_level :: Missing
rel_to_oxygen :: Anaerobe
isol_growth_condt :: 17158987
sequencing_meth :: WGS
assembly :: Newbler v. 2.3 (pre-release)
finishing_strategy :: Finished
GOLD Stamp ID :: Gi04003
Type Strain :: Yes
Funding Program :: DOE-GEBA 2009
Gene Calling Method :: Prodigal 1.4, GenePRIMP
Isolation Site :: caecum of chicken
Host Name :: caecum of healthy chicken
Cell Shape :: Rod-shaped
Motility :: Nonmotile
Sporulation :: Nonsporulating
Temperature Range :: Mesophile
Temperature Optimum :: 37CC
Gram Staining :: Gram-
Diseases :: None
##MIGS-Data-END##
##Genome-Assembly-Data-START##
Finishing Goal :: Finished
Current Finishing Status :: Finished
Assembly Method :: Newbler v. 2.3
Genome Coverage :: 30x
Sequencing Technology :: 454/Illumina
##Genome-Assembly-Data-END##
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI RefSeq
Annotation Date :: 10/20/2023 01:10:56
Annotation Pipeline :: NCBI Prokaryotic Genome
Annotation Pipeline (PGAP)
Annotation Method :: Best-placed reference protein
set; GeneMarkS-2+
Annotation Software revision :: 6.6
Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA
Genes (total) :: 3,772
CDSs (total) :: 3,670
Genes (coding) :: 3,596
CDSs (with protein) :: 3,596
Genes (RNA) :: 102
rRNAs :: 6, 6, 6 (5S, 16S, 23S)
complete rRNAs :: 6, 6, 6 (5S, 16S, 23S)
tRNAs :: 82
ncRNAs :: 2
Pseudo Genes (total) :: 74
CDSs (without protein) :: 74
Pseudo Genes (ambiguous residues) :: 0 of 74
Pseudo Genes (frameshifted) :: 14 of 74
Pseudo Genes (incomplete) :: 57 of 74
Pseudo Genes (internal stop) :: 12 of 74
Pseudo Genes (multiple problems) :: 8 of 74
##Genome-Annotation-Data-END##
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..40303
/organism="Phocaeicola salanitronis DSM 18170"
/mol_type="genomic DNA"
/strain="DSM 18170"
/isolation_source="cecum"
/host="chicken"
/culture_collection="DSM:18170"
/type_material="type strain of Bacteroides salanitronis"
/db_xref="taxon:667015"
/plasmid="pBACSA01"
/country="Japan"
/collected_by="isolated by P. T. N. Lan"
gene 14..349
/locus_tag="BACSA_RS18410"
/old_locus_tag="Bacsa_3649"
CDS 14..349
/locus_tag="BACSA_RS18410"
/old_locus_tag="Bacsa_3649"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_007559113.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_013619523.1"
/translation="MDYSKFILTVFGIYILYYAINIVYDSFFHKSSQEGNINEDEEFI
IDEEEDEEKPHEVLDNEVEQASLQEEIKDDSGEHNDEIQIVMEVETQGIPLEELIAKG
KNMFATVNY"
gene 379..693
/locus_tag="BACSA_RS18415"
/old_locus_tag="Bacsa_3650"
CDS 379..693
/locus_tag="BACSA_RS18415"
/old_locus_tag="Bacsa_3650"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_008765224.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="DUF4134 domain-containing protein"
/protein_id="WP_013619524.1"
/translation="MNLKNFLKRKTCIAIATVLLTTTSIYAQGAAGIDAASSELETYM
DPLGNMIMILGAIVGLVGAVRCFIKWNSGDQDVQKAVMGWMGSCIFLVVSGAIVKAFF
GV"
gene 695..994
/locus_tag="BACSA_RS18420"
/old_locus_tag="Bacsa_3651"
CDS 695..994
/locus_tag="BACSA_RS18420"
/old_locus_tag="Bacsa_3651"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_007856468.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="DUF4133 domain-containing protein"
/protein_id="WP_013619525.1"
/translation="MEREHPTFNVYKGLQKPLIFKGLKGKFIYIGAGCAIGALLSSVI
ISNIISYTWGGITLCIVMFGGLSLTVHLQKKGLHKKDKSKGIYIESRIFLKERKK"
gene 999..3839
/locus_tag="BACSA_RS18425"
/old_locus_tag="Bacsa_3652"
CDS 999..3839
/locus_tag="BACSA_RS18425"
/old_locus_tag="Bacsa_3652"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_008675930.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="conjugal transfer protein TraG"
/protein_id="WP_013619526.1"
/translation="MLKKKDFEAPWIGIEMIDSIPVFYNRRGDYSVCIRCENPIMQFA
ANTDAFYDFHNLFSNIIKTLGAGYIIQKQDIFCKEAFHSNNLNATDYLSKRYFEHFEN
RIFTSISTYITITRQLQRSKFFAWDSKEFSTFLRNITKVLSLLNSKDMGAKLLQPKEL
EEYMIRVISCNFNSQKLSLKNIKTTSEYINIGEKKLQSISLVDIDEVNLPTIIKPYKE
INVGVKLPVDLLSFIYDSPEIETIIYNQIIEIPDQRNESNKLEAKKRRHKSMPDPAND
LCVEDIDKVQSDIAREGKILVYAHYNIMLANQQDITKASNYIESSLFDCGIIPNKQCY
NQFELFKCALPGCATELKSYDKFLTTSDAAICFFFKERLALTEKSPFLTYYTDRQGIP
IGIDFSGKEGDIKYTNNSNVFVLGPSGSGKSFFVNDTIRQWVNQDTDIVMVDTGHSYS
GLCQYFNGKYITYSAEKPISMNPFDITEKEYNVEKKNFLKSLIFLLFKGSSGKILKEE
EEILDIVIDKYYSFYFNPFSGYSKEEKESIKETLLLEYQINHNELETLREKEKRELLE
IKLKKLEMLVERGEGGEVDNAKRAIQNILIENGFTLAEMNNPNERLLSIIERRIMEKE
AALKDIKVDNLSFNSFYEFSLRMIPIICNENKIQFDLSGYKFLLKKFYKGGQLERTLN
EKFDTSLFDEKFVVFEIDAIKDDPQLFPIVTLIIMDLFIQKMRLKKNRKALIIEEAWK
AIASEMMAGYIQYLYKTVRKFWGIAMVVTQELDDIISNPIVKKSIINNSDILCLLDQK
KFKDKYEEIANLLTLSEVDQKQIFTINQLNNKENRNRFNEVFIKRGSYGNVFGVEVSL
YEYFTFTTERIEKDAVGYYIELYGDYHKGLDNFINDMKKSNLKTGDWVRHVASVLGKI
NAEQNLTDIFYNNLANEETLYKFILTQYHESA"
gene 3895..4518
/locus_tag="BACSA_RS18430"
/old_locus_tag="Bacsa_3653"
CDS 3895..4518
/locus_tag="BACSA_RS18430"
/old_locus_tag="Bacsa_3653"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_011199143.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="plasmid transfer protein"
/protein_id="WP_245546628.1"
/translation="MYAQQAVFDITCVETLIANHKVQHSSFSNVKDNETQISLLQQKI
SEKMVQIEFFASKFYNSLKSVEAIIKTGKDIIYCTDIAKDIGQYQSEMVKLAKGDPEL
LLVSAKTELELVNRTSDLCQYIYQVAIIGTDVNLMDNKQRIDLLKYVINELRVMRGIA
YSVCRQMKTAKRNGVLKTLMPGAFKYKSNGSKIVEDILKDFKFNIKH"
gene 4524..5177
/locus_tag="BACSA_RS18435"
/old_locus_tag="Bacsa_3654"
CDS 4524..5177
/locus_tag="BACSA_RS18435"
/old_locus_tag="Bacsa_3654"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_011199144.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_013619528.1"
/translation="MKRIILFSLMFLGTLKMVAQTPVKDSGKWSVLNNMEFMDRVRLQ
PEWYHYWIWYKKIFGIKIPLVGLGLHDSYGKEDRRNFQLQEVPMMAAVALNKSEAEKE
HEKVDTVYRQELFKYADKTIDYQYNLTKGKRNELLSNIAVQLATYTSNGGSSEHVQVI
SEEVERINSNISIIHDSHMSNAKKREAYLGFEKELIEVLSLITRLNNVNNVIGKHYE"
gene 5170..6171
/locus_tag="BACSA_RS18440"
/old_locus_tag="Bacsa_3655"
CDS 5170..6171
/locus_tag="BACSA_RS18440"
/old_locus_tag="Bacsa_3655"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_008671657.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="plasmid transfer protein"
/protein_id="WP_013619529.1"
/translation="MNELIDKFLFELFDGLREHITDIFGEFLSDAQALAAIFMLLYFG
VESFKMMSGDKRLEIIPLLRPFALGLVLMFWNPFIEVISYPGEVLTEHSKDMFYNKID
EVEMLSRERYALIDSVAIELMHSSLEVERAEEEVKDDKWYDFNIDFSAIGEKIAGLWV
YVVAKVRMLLFSIVEFLVVTIWQLCIYLVFFLQIIFTGILVTLGPIAFAFSVLPAFRD
AYVQWIARFVSVSLYSVIGYIVLSLSLAIMGYGIEKEIAILHEALSNEAAFIMYVGMS
SGGVNSFILTLLLGAFSMLTIPFVSTWVVSTTGIGQAVGGMVGGAAIATKAVAGKIV"
gene 6191..6805
/gene="traK"
/locus_tag="BACSA_RS18445"
/old_locus_tag="Bacsa_3656"
CDS 6191..6805
/gene="traK"
/locus_tag="BACSA_RS18445"
/old_locus_tag="Bacsa_3656"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_008765218.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="conjugative transposon protein TraK"
/protein_id="WP_013619530.1"
/translation="MIIKNIENKIKLAGLLSIGSFISSIVISGMVLAFCFTLVREERK
KIYVLDQDVPVLVKQTGVEVNLEVECKSHVNLFHSLFFTLPPDDDFIKHNMESAMYLV
DESGLKQYNNLKEKGYFNTLLASSATVTIKTDSINMNMSDMSFTYYGTQRIERETSVL
KRQLVTTGYLRQVPRTDNNPHGLIITNWKTILNKDLDYKIKKSF"
gene 6807..7235
/locus_tag="BACSA_RS18450"
/old_locus_tag="Bacsa_3657"
CDS 6807..7235
/locus_tag="BACSA_RS18450"
/old_locus_tag="Bacsa_3657"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_013619531.1"
/translation="MFTKKKSWKENVRKNTENSTATFLTKLFTKIGVYKICNQILIWA
EAHRKAMFTITVSFLIFVTAFSIFTRPQRSGMETLKAEKAKIENIGNGGIEKSRNSLS
ALFELAKIREEIKQVQEKGKLTASDTLKIKELYNKVKQIK"
gene 7238..8377
/gene="traM"
/locus_tag="BACSA_RS18455"
/old_locus_tag="Bacsa_3658"
CDS 7238..8377
/gene="traM"
/locus_tag="BACSA_RS18455"
/old_locus_tag="Bacsa_3658"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_008765216.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="conjugative transposon protein TraM"
/protein_id="WP_013619532.1"
/translation="MKSIDIKKPKYILPALVLPFILGIGWIIKDMWSNSVPIEETQLT
EMTELNTEIPDAELEKRTVHNKFEALKSAFNKSSDFSSIQTIDKEENNNEIEDNGSLY
TNEEMRHIDSLNQASQLKKTELDNQTAALMEIQNNALTGNEKRPEKERELPQKSKMQE
EMELFKMQMAYIDSLQNPQRHQKPVVNDSKKTDMEEKTIEVMKAVNPATAYFNTVGKD
KKTSLITAILDENVKVTQGSRIRIRLLDDIMLNDAILSKGTYIYGNVSGFSEQRVKIN
ISSIMLDGKRMKVDLSVYDIDGQEGFFVPSSAFRDLSKDIGSQVGSQNITMNTSNGGV
EQFAFNALQDAYRSTTQALSKNIKKNKAKLKYNTQIFLVNNKEEK"
gene 8383..9225
/gene="traN"
/locus_tag="BACSA_RS18460"
/old_locus_tag="Bacsa_3659"
CDS 8383..9225
/gene="traN"
/locus_tag="BACSA_RS18460"
/old_locus_tag="Bacsa_3659"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_011199149.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="conjugative transposon protein TraN"
/protein_id="WP_013619533.1"
/translation="MRKFIATIVCFVCLISSIQAQTMPIGENVQMAGENPEELKVIYV
NKDVSTHFVAMEDIKYVDISINDIVGDIPTSNTLRVKPIKEGASGVITIVTERFLVQY
LLVYTSDLAKTYTRFTIPYADLKSYMNPETNMTKSQMYDYAYRMFISDNKFYDVSSKS
NLMKIRLNNIYTFDKYFFIDISMINRSNIRYDIDQIRFKIEDKKQTKATNFQSIEILP
LMQVNNNKVFKKNYRNIFVFEKFTFPDEKVLTVEISEKQISGRTITLRIDYADVLNAD
SFID"
gene 9236..9739
/locus_tag="BACSA_RS18465"
/old_locus_tag="Bacsa_3660"
CDS 9236..9739
/locus_tag="BACSA_RS18465"
/old_locus_tag="Bacsa_3660"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_005647321.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_013619534.1"
/translation="MKKVLVIISAALFSLKSFAGDGDKFLNLSGGYQWKNTVNLLVGF
EAETKYHNAWELYFDLSTAYTTCPTCYKVCSKSFWDYKTFGLGIAYKPSLYRGKNSVV
RWRIGADIGANRKGFQASIDLGIEYSYSFRNGMQVFVLQKNDFVFWTRDHFRNGLLVG
VKFPLSK"
gene 9752..10417
/locus_tag="BACSA_RS18470"
/old_locus_tag="Bacsa_3661"
CDS 9752..10417
/locus_tag="BACSA_RS18470"
/old_locus_tag="Bacsa_3661"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_007559134.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_013619535.1"
/translation="MKTSYLILALITSTIISSCTKHEKIIDTSFQPGNILCSDGSIIH
PSEYENSSKQAVGIVFWCNNIQDTSTSVIGYAISLQDLPAEQLINTSENISSVSEDET
SFDGEANTAAIKEFAEKDSIECPAITSVYNYVPYGYDGWYIGSVAQYKIAALNYPKIK
ATLDVVGQSDYFSGTYWTSTENGSGEQTSMFFAYTIHLENGTVSSSNKMKTNKIRPII
TIR"
gene 10424..11053
/locus_tag="BACSA_RS18475"
/old_locus_tag="Bacsa_3662"
CDS 10424..11053
/locus_tag="BACSA_RS18475"
/old_locus_tag="Bacsa_3662"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_008675920.1"
/GO_function="GO:0015288 - porin activity [Evidence IEA]"
/GO_function="GO:0042834 - peptidoglycan binding [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="OmpA family protein"
/protein_id="WP_013619536.1"
/translation="MKKIIFTICTICLVGCKSKEMITVSNANLSEKESILIENNSNYS
VASIVGIGAELIKKEQEKAINKKLLERENKLKNIPGLVVTTIDETNGKKIFKATMQNE
ILFKFDSHELNKNAKSILDEMIGIINEIPNTKIKVIGHTDNIGEKGYNILLSQNRAAA
VGNYLRNAGIETKNITEEGKGFDEPVSSNKTEAGRAKNRRVEIFLSNDY"
gene 11770..11964
/locus_tag="BACSA_RS18480"
/old_locus_tag="Bacsa_3663"
CDS 11770..11964
/locus_tag="BACSA_RS18480"
/old_locus_tag="Bacsa_3663"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_005799219.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="transcriptional regulator"
/protein_id="WP_013619537.1"
/translation="MKVKDKVLISPDLTQFAEWIPATVIEVENNPFVGVVISAKTEDG
IIFFGQEDLFKPQTEEVCLP"
gene 11952..12239
/locus_tag="BACSA_RS18485"
/old_locus_tag="Bacsa_3664"
CDS 11952..12239
/locus_tag="BACSA_RS18485"
/old_locus_tag="Bacsa_3664"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_013063035.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="virulence protein"
/protein_id="WP_013619538.1"
/translation="MFAISFDMSISDLKKHYGEPYNNAYFEIKAILRKNGFEWIQGST
YLTQSEDLSNLFRAIEALKKIEWFRKSVRDIRGYKVENWSDFTNIVKNEYE"
gene 12232..12492
/locus_tag="BACSA_RS18490"
/old_locus_tag="Bacsa_3665"
CDS 12232..12492
/locus_tag="BACSA_RS18490"
/old_locus_tag="Bacsa_3665"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_005647331.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_013619539.1"
/translation="MNDKISLDVALDIIGTLRMMKMKEITAEKDESKKDELYKELDML
STEEEIANGLLQFEASDNVRLSVIDKINRLYAPILKAYYAAK"
gene 12479..13339
/locus_tag="BACSA_RS18495"
/old_locus_tag="Bacsa_3666"
CDS 12479..13339
/locus_tag="BACSA_RS18495"
/old_locus_tag="Bacsa_3666"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_005647332.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="zeta toxin family protein"
/protein_id="WP_013619540.1"
/translation="MQRNEVERIFEQEKEKFFRKQYKSDCPPIAIILGGQPACGKSTL
IQIAQSDHPEQKFLTVNGDLYRQFHPEHDKLIKDPIRYPSETQIFSNVFTEKLIEEAI
KRKCNIIVEGTMRNPMVPLNTASKFREAGYRVEAYIIAAPKEFTHLGLYNRYQEECNK
KGVGRLADIESHNKAVIGVSKSIDELYNRKAVDRISIHSYIAKERVKDFFLEHNAWNC
RSLPSIFISDSRVQQLKNKILLESCINRGESMLLQVNDKQIRKGMENAINDLKRALII
SQKQQRGYKI"
gene complement(13386..14051)
/locus_tag="BACSA_RS18500"
/old_locus_tag="Bacsa_3667"
CDS complement(13386..14051)
/locus_tag="BACSA_RS18500"
/old_locus_tag="Bacsa_3667"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_005647334.1"
/GO_function="GO:0046872 - metal ion binding [Evidence
IEA]"
/GO_process="GO:0006508 - proteolysis [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="M23 family metallopeptidase"
/protein_id="WP_013619541.1"
/translation="MKNNRFAFFLFTCSVSVSAYSQFNTVLQKEELTVVEPTLSTNDA
RLLKEQEQAVIINDAVSEERLAYWNQRRYLSLPIDSMIVTSKYGKRKDPFTGKIATHK
GVDLRGRNDYVYSIMPGIVTKTGKNRGLGNYIEVQHGDFTSIYAHLYNILVNAKQSVE
AGQPIGISGSTGRSTGEHLHFQMEYKDKTIDPLPILEYINDVIRTVKGEVTQQIDNAL
RKR"
gene 14093..14797
/locus_tag="BACSA_RS18505"
/old_locus_tag="Bacsa_3668"
CDS 14093..14797
/locus_tag="BACSA_RS18505"
/old_locus_tag="Bacsa_3668"
/inference="COORDINATES: protein motif:HMM:NF024745.3"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="DUF4099 domain-containing protein"
/protein_id="WP_013619542.1"
/translation="MNNRQEYFKENDIPYGQLEKVGLTKMDILSLPKTDLESLLSGKR
TSLLNLKGIDMQGHDFEIKAKISLYRKEDHSVGVKIHPVRNCIQNDANLKPQELNKLQ
SGSLITKKIDGEKYLLQLDKETNEILKAKLRSIIIPSFINGSEISSKQKEELKNGETI
VINNGNDKIKVRIDLNSQKGIQLYAFEQQQKRAYDFHNPKVSDVIHTDRNRAEYLEYQ
QKQISKQKEDTVKLKF"
gene 14802..16316
/locus_tag="BACSA_RS18510"
/old_locus_tag="Bacsa_3669"
CDS 14802..16316
/locus_tag="BACSA_RS18510"
/old_locus_tag="Bacsa_3669"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_007559152.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="DUF3945 domain-containing protein"
/protein_id="WP_013619543.1"
/translation="MENKKFEAAQYSYENAGQLRAIAKILGYEEKLSGNGNIVFSKGN
EHHSYSIDDLKKGNRKPDREKIVQQSKERVVAFFNKTEANNNFNEYNQFLQQNHNLAI
VKWDNIKGNKNGFTVIDLENKTAYTGEELYKFAYEKNYKLDGNAGRIDINWEELNEIG
IDPNKLSKEDKENLRNGQKTGTLQFSIEDTPQNRKFLDKEKVSYTVDNGKLNFEGKAA
ASKYILLDNTEENKSKLKALDVDFKEHGKQQLKVSGINARKLAIAAITVVYPVAGVAL
MLVPKRKEIKNDFSFSKDEIKSLENNAVISKKNAKGEQILFQRDKDTNDIVSINAKNI
QIPTRIAGVELTPMQIEKLKKGHEIVIINETLNKAAKVRLDLNAKNGLSIKEANNIDI
KRETKQIVTDKERLEFVAKQGAKGIDKIFDKKPSEMDSFLEKYNLKKDYASYKEIEKS
FSTSKEASSQTTGEKIASQLDKLDAAIKATAHNEASNLYGKSYGKQNESSKMKM"
gene 16318..17424
/locus_tag="BACSA_RS18515"
/old_locus_tag="Bacsa_3670"
CDS 16318..17424
/locus_tag="BACSA_RS18515"
/old_locus_tag="Bacsa_3670"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_004295336.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="toprim domain-containing protein"
/protein_id="WP_013619544.1"
/translation="MMSFEDYKSKISIIQILEDLGYKQDIGKGKVSPVYQLTDSNGNK
IDSIVVKNPHSPREYYFDRNYKGGDLIQFLKNHINDFTQFQHNNLYVRLNMILGHYAN
TPYIKNGSYYTKISEQQKFNRERYIETPTNVSDLKYLTVERKINPATVETFLPFITRV
KDTQGKGNFLNIAFPYTNPQNGEKTNYELRNYNFKGMAAGGDKSNSAWIADFTSHPLM
AKNIYFAESALDAMSFYELNKNKINLSDSVFVSVGGYISDNQIKNALQKYPNAKVHTC
FDRDLNGNLYDIKVQCIMNGTELKIKAKDNTVEFVTPNGIFELNKEDVSIERFREKSK
DASTKLIVHKADGAKDFNEILMSRTPTQKKTFRL"
gene 17421..17900
/locus_tag="BACSA_RS18520"
/old_locus_tag="Bacsa_3671"
CDS 17421..17900
/locus_tag="BACSA_RS18520"
/old_locus_tag="Bacsa_3671"
/inference="COORDINATES: protein motif:HMM:NF015648.3"
/GO_function="GO:0005515 - protein binding [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="PH domain-containing protein"
/protein_id="WP_013619545.1"
/translation="MKNDSDIIIRPNIRYWIIRIIPYVFLETLIIYIVNLFNLNDYII
GSCTLVVFFSIFYKYLSILLCTKWIITKEQIKIYSGVFNKSINYIELYRVYDYEEKRS
FILSLIQCTNVYIHSGDKSTPILAIYGINRNIDLIGIIRKRVERQKQIKSIYEFTNR"
gene 17904..18578
/locus_tag="BACSA_RS18525"
/old_locus_tag="Bacsa_3672"
CDS 17904..18578
/locus_tag="BACSA_RS18525"
/old_locus_tag="Bacsa_3672"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_011199162.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_041584520.1"
/translation="MRRIILFSLMFLGALKMVAQSIVIDPTLVGTLVYAHTEQQNVLN
KIKDEEGRIRNFQILIQQKMGQIKDLQEKTYNYLSTVNAVVKNGKDIIYASNIAKDIV
KYQGDAAKYAAGDPALVSVIAKSEYELITRSVDLMIYINNIALQGGANNLMDNKQRID
LCIHVVNELRAMRAIAFSVCRQMKYAKRAGVLKTLMPGAFKYKDQSGQIVNDILKDFK
FTKKGF"
gene 18580..19407
/locus_tag="BACSA_RS18530"
/old_locus_tag="Bacsa_3673"
CDS 18580..19407
/locus_tag="BACSA_RS18530"
/old_locus_tag="Bacsa_3673"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_008671625.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="topoisomerase C-terminal repeat-containing
protein"
/protein_id="WP_013619547.1"
/translation="MELRKIGICPVCGKGQIVVGTLGYSCNYFKTMDDKCTFNIYHTY
WNKTITEDIAEQLITKGKTEIFHDFMKKDGTPFSAALVIESGKVVPRFANKTLEHPCP
LCGGHIEVLLSGYACTNYNEKNTDGTRKCKLYIPRTIAKRDIPIQAIEALLENRETPF
MSGFSSNSGESFAAKLVLTSDGRISFDNTICKCPKCDGNIYMGKKAYNCSNYKNETIK
CDFVIWREMSGRKITPEEVLELCENKETKILSGFHDKDGNPMERKLILNDDFKIKLI"
gene 19404..19754
/locus_tag="BACSA_RS18535"
/old_locus_tag="Bacsa_3674"
CDS 19404..19754
/locus_tag="BACSA_RS18535"
/old_locus_tag="Bacsa_3674"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_004295339.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_013619548.1"
/translation="MKVNIVIDSRLFKRPLCVEIDWNFPHLPRIGEQISPLIIMLSPK
LTYENLIEFLTDEAINDFCKDLTCNEEVEEYFRAWIYDVICEANIIESIHYISDKEDY
TKIIPEIYLSDLRN"
gene 19766..20044
/locus_tag="BACSA_RS18540"
/old_locus_tag="Bacsa_3675"
CDS 19766..20044
/locus_tag="BACSA_RS18540"
/old_locus_tag="Bacsa_3675"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_004295340.1"
/GO_function="GO:0003677 - DNA binding [Evidence IEA]"
/GO_process="GO:0030261 - chromosome condensation
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="HU family DNA-binding protein"
/protein_id="WP_013619549.1"
/translation="MQINKTDLIKIVAEKANQPTKEVAEIIDLFFKELSQNLRDKDVS
IKDFGTFKKRIVPPKKARNPATGETIYVPEKEAVKFRPSKNVLKMKWL"
gene 20064..20513
/locus_tag="BACSA_RS18545"
/old_locus_tag="Bacsa_3676"
CDS 20064..20513
/locus_tag="BACSA_RS18545"
/old_locus_tag="Bacsa_3676"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_013619550.1"
/translation="MKQFISLSAICLCTLFFASCSKDNKEPITPGNKTAEIRYEATVD
DPENFNLNIHYSIGEYNTTELPDGYEGKQVTTESPFKSEIITVNTGALLWLSATVEPK
NEDYITTPMSANVEVKLYINGKLEHSKQSYNYAMIYCLYNPDKIIKW"
gene 20724..22682
/locus_tag="BACSA_RS18550"
/old_locus_tag="Bacsa_3678"
CDS 20724..22682
/locus_tag="BACSA_RS18550"
/old_locus_tag="Bacsa_3678"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_005647355.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="type IV secretory system conjugative DNA
transfer family protein"
/protein_id="WP_013619552.1"
/translation="MEENKELQKIYGFMQAFIYVTVCIEILLFVHFSFSDRIMPILSK
LSRLPIYSNIFYSKLFTLFIIMVTCIGTRSKKNLELDPTKQIIFPLVFGFIIFFGAAF
FLMFKSGAIHSGFEWYNISYIILSIIGAVLINSALDNVSKRIKSSFMKDRFNVENESF
EQSKELVNTDYSVNIPMKFYWKKKMNKGWINIVNPFRGTFVIGTPGSGKSYSVINSFI
RQHSAKGFAEVVYDFKFPELAKIAYYHFLRNKKKGKIPKEFKFNVINFTNIEYSKRIN
PLKREYIEILADATETAEALYESLQKGDKGSGGNSDFFKTSAVNLLAASIYFWSRYEN
GKYSDLPHVLAFLNQEYDILFKVLFSEPELKSIVSPFEAAYKSGAVDQLEGQMASLKI
QLSRLATKESFWVFSGDDFNLKVSDKNAPSYLIIANNPKTQSMNSALNALIINRLTRL
VNTKGNYPTSIIVDECPTLYFYQLATLLSTARSNKVSVCLGLQELPQLEEQYGKATAK
TICSIIGNTLSGQAKDPNTLDWLQKLFGKIKQRKEGISIQRDKTTISMNEQMDFAIPA
SKISSLQAGSLVGQIALDFGQEDSFPTTMYNCKTDLDTKKIEKETEHYVDLPKFYNFG
TAEKREALLQKNFKKIYDEVESVISQYV"
gene 22675..23061
/locus_tag="BACSA_RS18555"
/old_locus_tag="Bacsa_3679"
CDS 22675..23061
/locus_tag="BACSA_RS18555"
/old_locus_tag="Bacsa_3679"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_004295346.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="transcriptional regulator"
/protein_id="WP_013619553.1"
/translation="MYKINLPTLGVRLKQIREYIGYSQAQLADKLGCRQNAISNIELG
KGGSLTLLINLLNFYSEYVYIDLIFSERFYLISSNEHDEAKKANYNSVIIELIKQSEK
IFNSKIEESQKELKENLRKAIDLLRS"
gene 23428..23868
/locus_tag="BACSA_RS18560"
/old_locus_tag="Bacsa_3680"
CDS 23428..23868
/locus_tag="BACSA_RS18560"
/old_locus_tag="Bacsa_3680"
/inference="COORDINATES: protein motif:HMM:NF015935.3"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="JAB domain-containing protein"
/protein_id="WP_013619554.1"
/translation="MKKLAVEFSLQAKKCDFPIQKIRSSIDAASFAKQIYGNDILIYE
SAYIILINSAGNTIGYAKISQGTINSTLIDVRLVAKYAIEALATGVILIHNHPSGNTR
PSVDDSNMATRLKKALDLLNIRLLDSIIITDTENYYSFSDEGFI"
gene complement(23953..24600)
/locus_tag="BACSA_RS18565"
/old_locus_tag="Bacsa_3681"
CDS complement(23953..24600)
/locus_tag="BACSA_RS18565"
/old_locus_tag="Bacsa_3681"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_008779785.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_085929115.1"
/translation="MRKIYFALITLSIVCFFTSCSNEEDVNGGYSEEEKVKIETLMNL
FESYGWELDTTVSVEQRNKELLEMDYEKTKSFLEYMNNGIEFENSEPIVNDASDYSGV
LNQTRTTILYPIYGSHSSAVATSKTEMILSYDAPTTSSVTIDRTSVSSNPATTWLPDE
YGTFSFSGNKCENIRATGTIKYGSIYSHKYEMIGWCSKNNSGTVNDGAITGFHSI"
gene complement(24646..25005)
/locus_tag="BACSA_RS18570"
/old_locus_tag="Bacsa_3682"
CDS complement(24646..25005)
/locus_tag="BACSA_RS18570"
/old_locus_tag="Bacsa_3682"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_144005311.1"
/translation="MIKNLSFIMLALFLSCCNSTKKQENSLDSEIDTFEYVHLIPDSL
RTMEQKELLLLLEKTIKENLQVKDNHLFFKLSESDFVELGIPLQYYKKLQQDLDDANS
FIDLNGIERIDTLLKMK"
gene complement(25023..25703)
/locus_tag="BACSA_RS18575"
/old_locus_tag="Bacsa_3683"
CDS complement(25023..25703)
/locus_tag="BACSA_RS18575"
/old_locus_tag="Bacsa_3683"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_013619557.1"
/translation="MKKCNFFLAFGLVLTLSLGVSSCSQDDVLEVNEQKGNVALCTTR
AEANMVLSKYLELNNEQYTLSISAEEAEKLGVPFGLYEDAQRELSITNALIQKLKNDP
NTILELTDPKVAPKSRSNWDTPSLYSAPTGTLRTNGQEEAISGFVWAPSGTKGIEFLC
RANAALTPLYNCKTYSSGAWQSKSAIGALGVNTTIQVPLYVSNDNIRVAFSTSDSNGG
TATYQGYN"
gene complement(25815..26957)
/locus_tag="BACSA_RS18580"
/old_locus_tag="Bacsa_3684"
CDS complement(25815..26957)
/locus_tag="BACSA_RS18580"
/old_locus_tag="Bacsa_3684"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_005942704.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="beta-ketoacyl-ACP synthase III"
/protein_id="WP_013619558.1"
/translation="MKNEVFIKKVNSFLPNEPVDNESMEDYIGRIEGKPSRVKNLVLK
QNGIKTRYYALNKNQEITHTAAELAARAIRGLFDNNQDLESLELITTATSIPDQILPS
HASMVHGLLPETKNIEIFSTSGVCLTSLQALKIAYLSVVSGEKNNAVCCASELVSAAL
LSKHYDAEYEKCHSIGENPYFGFEKDFLRFMLSDGAGAVYLDNVPSESGNSLKIEWIE
MESNANELPACMISGADFRADGSITTWKSYDSEEISEKSVFTVKQDIRLLKKHIIRLW
VDHIENVMKKHNIAPVEVDYVIPHVSSMFFYKELLNEIEKRNIDLRENKWFTNLTWVG
NMGSASIFVALDELLKTQNIAKGKKILLLVPESGRFSYGTTLISVV"
gene complement(26947..27540)
/locus_tag="BACSA_RS18585"
/old_locus_tag="Bacsa_3685"
CDS complement(26947..27540)
/locus_tag="BACSA_RS18585"
/old_locus_tag="Bacsa_3685"
/inference="COORDINATES: protein motif:HMM:NF012655.3"
/GO_function="GO:0003677 - DNA binding [Evidence IEA]"
/GO_function="GO:0003700 - DNA-binding transcription
factor activity [Evidence IEA]"
/GO_process="GO:0006355 - regulation of DNA-templated
transcription [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="TetR/AcrR family transcriptional regulator"
/protein_id="WP_013619559.1"
/translation="MKNYDIERILKPAFKLFLMYNYEGVSTSKLEAESGLTRGAIFFK
YKTKEDLFKAVIDKYVFTFQSSSSDLEIATLKDFIDLYLTKVENRMKEMHSLGIENVH
RGYFNLLYQALKFYPDFDRKITELFNRGLHQWECILQKAKESGEIKSSCDIHETAQRF
RYIYSGMSFENSLNQGLSIEKLRVVFYSYYREIANEK"
gene complement(27740..28159)
/locus_tag="BACSA_RS18590"
/old_locus_tag="Bacsa_3686"
CDS complement(27740..28159)
/locus_tag="BACSA_RS18590"
/old_locus_tag="Bacsa_3686"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_013619560.1"
/translation="MSEKLRKKTDTDASTSSKSIMAIASLLRNGAVEQASAYSDGQTE
NENQTVDDSSDDFKQVNNESDSMSLEELVKVIKAKEYTCKDVIYVDSELKEIFSLLKA
KLKIPISPLVSYIIEDWVSKHEKQIIDLINSKKNRFL"
gene complement(28214..28837)
/locus_tag="BACSA_RS18595"
/old_locus_tag="Bacsa_3687"
CDS complement(28214..28837)
/locus_tag="BACSA_RS18595"
/old_locus_tag="Bacsa_3687"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_011264142.1"
/GO_function="GO:0005524 - ATP binding [Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="ParA family protein"
/protein_id="WP_013619561.1"
/translation="MIIVFGNQKGGCGKTTNCAQFANYLSELGKEVLVLDLDFQRSLM
DRREEDIKTYDNEPKYEIMEAKISDVAKVIRDFKNVDNGNLIIDLPGRIDNDALGVIL
NAADIIVCPFRYDKFTMDSTGFFIQIIQYLKVKAKVFFLPNNIRSSVRYETKEQIISI
LEKIGVVTKEIPQSVLMERANTLLITGECMNLVKGAYDCIIEQGGIK"
gene complement(28851..30419)
/locus_tag="BACSA_RS18600"
/old_locus_tag="Bacsa_3688"
CDS complement(28851..30419)
/locus_tag="BACSA_RS18600"
/old_locus_tag="Bacsa_3688"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_007660158.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="relaxase/mobilization nuclease domain-containing
protein"
/protein_id="WP_013619562.1"
/translation="MIVKIAKAARTFAGVNYNEKKNEHGTGELLVAANFAINPDNMKK
SDLIAYMEHVCATNKAVKNKQFHAIISCKGREYSVDELKDIALKYIDKMGYGKNPYLI
YFHSDTEHNHVHIVSTRVGKDGVKINDKMEAVRSQRIMNEILRVDLSEKAKRDITNAF
SFNFSSIQQYKLLLEQQGWKLTEQNNVLKLRRGGEVHAILSIDEIHARINAHRVDNKR
KDQIIALLHKYKQGLSYTQLQELMKNKFGIELIFHVGKGHTIPYGYTVIDYPNKTVYK
GSELMEIKSLITSPDTKSKIENCNSILNAIFRDNHKSLTMEDLQAELKKYGYSLMMDG
RIVLQDNNSILLRIDKDVVEQLRYHSRCREANSFKITSADEAKLLAKIYNIKLDDVII
LQKGKEGYLDKSIYVDMLNSYVSYDSDIRSTMHNKNLVLIESNDKIYLIDKKEKIIVS
SDEFSLTDFNRSQVKVNSLTGQENGIKEIMKSDVNAARGCNIIDVVCDILGQHIYVQQ
DSSNRRKKKRSQQQ"
gene complement(30552..30905)
/gene="mobC"
/locus_tag="BACSA_RS18605"
/old_locus_tag="Bacsa_3689"
CDS complement(30552..30905)
/gene="mobC"
/locus_tag="BACSA_RS18605"
/old_locus_tag="Bacsa_3689"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_004295357.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="plasmid mobilization relaxosome protein MobC"
/protein_id="WP_013619563.1"
/translation="MDANRNKVLRVRLSADEYNKLIRLAGKYKCVSEYVRARIFGHGV
ELVDPKEFIRAMDDICLEMKRIGININQLAKYVNLHKGINNDVVIKDIETRLSEYIKM
EEKLNETWRKLMRIK"
gene complement(32065..33192)
/locus_tag="BACSA_RS18610"
/old_locus_tag="Bacsa_3691"
CDS complement(32065..33192)
/locus_tag="BACSA_RS18610"
/old_locus_tag="Bacsa_3691"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_004295359.1"
/GO_function="GO:0003887 - DNA-directed DNA polymerase
activity [Evidence IEA]"
/GO_process="GO:0006270 - DNA replication initiation
[Evidence IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="RepB family plasmid replication initiator
protein"
/protein_id="WP_013619565.1"
/translation="MVKQKKEILKGEIVRIRKGHPRTNKPVVLPDNPTWLKQPNLITL
MAGDFKTVQIRILIAVIEKLQNAIEQSILYLNKYGTAIPFEQLTLFQEEQASDSITID
IAYKDLGVSSDQYSEVKAMLRKLVSIPVEFDAKDPITGEECWQISGLFTKVNIPKTPY
ARSFSIKMDKLVATAFINVDKGFTRYIKEIAFNAQSRYTIRMYMLISSWKDQGGFSIY
LDRFRKYLKLENKYKDFKDLYRRVIRPVYDDLFEKADCWFEVAEVYKLKSDLQPYKLN
FKVIKSAPSKKEEEMLRIQLTNIRNVCMRHLHMSSEQVDRLVKNVNLSNYQKVMDKIL
FLHEYINKHWKEINDIPEYCLTSVLKEIEDNPGIIGKDEEK"
gene complement(33343..33564)
/locus_tag="BACSA_RS18615"
/old_locus_tag="Bacsa_3692"
CDS complement(33343..33564)
/locus_tag="BACSA_RS18615"
/old_locus_tag="Bacsa_3692"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_008765230.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_013619566.1"
/translation="MNDLINNSKTLDECFSDLILKRGWWKNSDFDRKTAHFHKKQFLL
GKLPDEIKRVYLENAGYKKVQQELWKISL"
gene complement(33557..34018)
/locus_tag="BACSA_RS18620"
/old_locus_tag="Bacsa_3693"
CDS complement(33557..34018)
/locus_tag="BACSA_RS18620"
/old_locus_tag="Bacsa_3693"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_013619567.1"
/translation="MKHIKYKVYEREPDKALIVSYSDLESHTSYKIGKRKFVGKKAKI
EAIFRLTGIRLSNEYTTEQVNQYLSENLFGTSAWYQYRRIYNEVVNEKVVSQEEYIFK
YNLLCELSDEGLNLPPDDAKIIYFVSTWLSGESVAYYQGINNPFISIKKDE"
gene complement(34020..34253)
/locus_tag="BACSA_RS18625"
/old_locus_tag="Bacsa_3694"
CDS complement(34020..34253)
/locus_tag="BACSA_RS18625"
/old_locus_tag="Bacsa_3694"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_144005313.1"
/translation="MMDLVFKFLIGIVLGGSIACMLFYFRIRTLKKWIKDLEKKQAKS
GDMISLVLNDDLPKLKPYFGQRLLNFIVGFIKK"
gene complement(34234..34455)
/locus_tag="BACSA_RS18630"
/old_locus_tag="Bacsa_3695"
CDS complement(34234..34455)
/locus_tag="BACSA_RS18630"
/old_locus_tag="Bacsa_3695"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_013619569.1"
/translation="MDEYIYFLKRLNEVKNDIDSLIAELNSKYGDKKISDVISAHKDI
PSVLESAFARLINEAGNTKLKDLNDGLGF"
gene complement(34463..34705)
/locus_tag="BACSA_RS18635"
/old_locus_tag="Bacsa_3696"
CDS complement(34463..34705)
/locus_tag="BACSA_RS18635"
/old_locus_tag="Bacsa_3696"
/inference="COORDINATES: ab initio
prediction:GeneMarkS-2+"
/note="Derived by automated computational analysis using
gene prediction method: GeneMarkS-2+."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_013619570.1"
/translation="MEDKKFTLRISEAESEKLERLKKVVGVNTYTGVIKCLISQYEDL
NVRYLNEREANVRLKKENQSLQLKINTFLDAFNNLK"
gene complement(34890..35900)
/locus_tag="BACSA_RS18640"
/old_locus_tag="Bacsa_3697"
CDS complement(34890..35900)
/locus_tag="BACSA_RS18640"
/old_locus_tag="Bacsa_3697"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_008765225.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="ArdC-like ssDNA-binding domain-containing
protein"
/protein_id="WP_013619571.1"
/translation="MKKTFDKNAEKFVALMVEKIESMSENWQKPWFYKGKSLNIFIPQ
NLTGRYYSGGNVFLLYFLCEKYNYQTPVFLTFNQARKEGIKISKGSISFPVYYTMLCA
YERNTNEKISFEDYRALSEEDKANYRLSSYTQYYHVFNIDQTDFATRYPQKWKMLKEK
FLKETDENNNQTKGMYVNPILDAMNESQSWVCPISIEYSDSAFYSLSTDSITLPLKKQ
FLDGENFYATELHEMGHSTGVNERLNRKHFYDRDIKSYGREELVAELVAALMGLYLGI
SVSVRKENAAYLKTWCKSIGEEPKFLFSVLADAIKAVKYISRHLNISLELENEQSITD
VA"
gene 36374..>36664
/locus_tag="BACSA_RS20705"
/pseudo
CDS 36374..>36664
/locus_tag="BACSA_RS20705"
/inference="COORDINATES: protein motif:HMM:NF037081.3"
/GO_function="GO:0003677 - DNA binding [Evidence IEA]"
/GO_process="GO:0030261 - chromosome condensation
[Evidence IEA]"
/note="incomplete; partial in the middle of a contig;
missing C-terminus; Derived by automated computational
analysis using gene prediction method: Protein Homology."
/pseudo
/codon_start=1
/transl_table=11
/product="HU family DNA-binding protein"
gene complement(36978..37376)
/locus_tag="BACSA_RS18650"
/old_locus_tag="Bacsa_3699"
CDS complement(36978..37376)
/locus_tag="BACSA_RS18650"
/old_locus_tag="Bacsa_3699"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_005799260.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_013619573.1"
/translation="MKPTDYIEWDNLKNIPFALCQVVEDEENKDIDIYYLGKRVFHDY
DHVGHYLRTAVILFSRIKNRTADWVNLHNLWTLRNCVRENYNHSIGVDNLIFGEDFDG
ENLDTLTPLTKKRFDLVIKRIKELDEYATI"
gene complement(37382..37660)
/locus_tag="BACSA_RS18655"
/old_locus_tag="Bacsa_3700"
CDS complement(37382..37660)
/locus_tag="BACSA_RS18655"
/old_locus_tag="Bacsa_3700"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_008782593.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="type II toxin-antitoxin system YafQ family
toxin"
/protein_id="WP_316928579.1"
/translation="MMKTLRYSTQFKKDFKRYRNNPNKLEKLLEVFQMLENEIELPAK
YRAHMLKGDYLGCMECHIEGDFLLIWLDAEKDIIEVLRLGSHSELFKK"
gene complement(37657..37902)
/locus_tag="BACSA_RS18660"
/old_locus_tag="Bacsa_3701"
CDS complement(37657..37902)
/locus_tag="BACSA_RS18660"
/old_locus_tag="Bacsa_3701"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_007562419.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_013619575.1"
/translation="MEAVIRKQTSFRLREDLLKDLQEEARKANRSLNNFVESTLMDAM
YSEPNEETIAAIKEARTGKFAGTIDTSSMEAFIKSCE"
gene complement(38214..38612)
/locus_tag="BACSA_RS18665"
/old_locus_tag="Bacsa_3702"
CDS complement(38214..38612)
/locus_tag="BACSA_RS18665"
/old_locus_tag="Bacsa_3702"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_005868776.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_013619576.1"
/translation="MKPTTYIDWDNLQNIPFFLCTVKEDVENEDIDVYYNGELVLHDY
NHCGYYLYTAIRLFARIKRITLEWVNLKNLWILRNCIRENHNHCIGVEHLIYGSHFDG
KNYDTITPLTQRRFDYLCKRIRKLDPYATL"
gene complement(38771..38977)
/locus_tag="BACSA_RS18670"
/old_locus_tag="Bacsa_3703"
CDS complement(38771..38977)
/locus_tag="BACSA_RS18670"
/old_locus_tag="Bacsa_3703"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_007757018.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="WP_013619577.1"
/translation="MDINYVTLLDYSTGSILIIKLDEKQKAMAENFDDFESYLYTLES
QYGFRLKDCCWMGTFSYEERKFNF"
gene complement(39582..40172)
/locus_tag="BACSA_RS18675"
/old_locus_tag="Bacsa_3704"
CDS complement(39582..40172)
/locus_tag="BACSA_RS18675"
/old_locus_tag="Bacsa_3704"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_004295368.1"
/GO_function="GO:0000150 - DNA strand exchange activity
[Evidence IEA]"
/GO_function="GO:0003677 - DNA binding [Evidence IEA]"
/GO_process="GO:0006310 - DNA recombination [Evidence
IEA]"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/codon_start=1
/transl_table=11
/product="recombinase family protein"
/protein_id="WP_013619578.1"
/translation="MEFIGYARVSTREQNLDLQLDALKSVGCERIFMEKASGVKERPE
LDKALSYLRAGDTFVIWKLDRLGRSLKELVSIVDGLQKRNIAFISISDGINTSSALGK
CQFGIFAALAEYEREMIIERTKAGLQAARERGKLGGRPKGLSVEGKRKAKAAKILYLN
GEYSINEICKMLKIGSKATLYRYLSFENVSINRRKK"
CONTIG join(CP002531.1:1..40303)
//
