LOCUS NC_015510 8371686 bp DNA circular BCT 24-DEC-2012
DEFINITION Haliscomenobacter hydrossis DSM 1100 chromosome, complete genome.
ACCESSION NC_015510
VERSION NC_015510.1 GI:332661999
DBLINK Project: 66777
BioProject: PRJNA66777
KEYWORDS .
SOURCE Haliscomenobacter hydrossis DSM 1100
ORGANISM Haliscomenobacter hydrossis DSM 1100
Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales;
Saprospiraceae; Haliscomenobacter.
REFERENCE 1 (bases 1 to 8371686)
AUTHORS Daligault,H., Lapidus,A., Zeytun,A., Nolan,M., Lucas,S., Del
Rio,T.G., Tice,H., Cheng,J.F., Tapia,R., Han,C., Goodwin,L.,
Pitluck,S., Liolios,K., Pagani,I., Ivanova,N., Huntemann,M.,
Mavromatis,K., Mikhailova,N., Pati,A., Chen,A., Palaniappan,K.,
Land,M., Hauser,L., Brambilla,E.M., Rohde,M., Verbarg,S., Goker,M.,
Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Kyrpides,N.C.,
Klenk,H.P. and Woyke,T.
TITLE Complete genome sequence of Haliscomenobacter hydrossis type strain
(O)
JOURNAL Stand Genomic Sci 4 (3), 352-360 (2011)
PUBMED 21886862
REFERENCE 2 (bases 1 to 8371686)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (10-MAY-2011) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 8371686)
AUTHORS Lucas,S., Han,J., Lapidus,A., Bruce,D., Goodwin,L., Pitluck,S.,
Peters,L., Kyrpides,N., Mavromatis,K., Ivanova,N., Ovchinnikova,G.,
Pagani,I., Daligault,H., Detter,J.C., Han,C., Land,M., Hauser,L.,
Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D.,
Verbarg,S., Frueling,A., Brambilla,E., Klenk,H.-P. and Eisen,J.A.
CONSRTM US DOE Joint Genome Institute (JGI-PGF)
TITLE Direct Submission
JOURNAL Submitted (26-APR-2011) US DOE Joint Genome Institute, 2800
Mitchell Drive, Walnut Creek, CA 94598-1698, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence is identical to CP002691.
URL -- http://www.jgi.doe.gov
JGI Project ID: 4087347
Source DNA and organism available from Hans-Peter Klenk at the
German Collection of Microorganisms and Cell Cultures (DSMZ)
(hans-peter.klenk@dsmz.de)
Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)
David Bruce (microbe@cuba.jgi-psf.org)
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LANL
Annotation by JGI-ORNL and JGI-PGF
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. It is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
##MIGS-Data-START##
investigation_type :: bacteria_archaea
project_name :: Haliscomenobacter hydrossis O, DSM 1100
collection_date :: before 1973
lat_lon :: Missing
depth :: Missing
alt_elev :: Missing
country :: Netherlands
environment :: Sludge
num_replicons :: 4
ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393
biotic_relationship :: Free living
trophic_level :: Missing
rel_to_oxygen :: Missing
isol_growth_condt :: 124107
sequencing_meth :: WGS
assembly :: Newbler v. 2.3 (pre-release)
finishing_strategy :: Finished
GOLD Stamp ID :: Gi04678
Type Strain :: Yes
Funding Program :: DOE-GEBA 2009
Isolation Site :: sludge (activated sludge, Oss)
Isolation Comments :: isolated by Van Veen
Temperature Range :: Mesophile
Diseases :: None
##MIGS-Data-END##
##Genome-Assembly-Data-START##
Finishing Goal :: Finished
Current Finishing Status :: Finished
Assembly Method :: Newbler v. 2.3
Genome Coverage :: 30x
Sequencing Technology :: 454/Illumina
##Genome-Assembly-Data-END##
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..8371686
/organism="Haliscomenobacter hydrossis DSM 1100"
/mol_type="genomic DNA"
/strain="DSM 1100"
/isolation_source="activated sludge"
/culture_collection="DSMZ:DSM 1100"
/db_xref="taxon:760192"
/country="Netherlands: Oss"
/collected_by="Van Veen"
/note="collected before 1973"
gene 106..1572
/locus_tag="Halhy_0001"
/db_xref="GeneID:10590760"
CDS 106..1572
/locus_tag="Halhy_0001"
/note="COGs: COG0593 ATPase involved in DNA replication
initiation;
HAMAP: Chromosomal replication control, initiator DnaA;
InterPro IPR003593:IPR013159:IPR001957:IPR013317;
KEGG: phe:Phep_3606 chromosomal replication initiator
protein DnaA;
PFAM: Chromosomal replication control, initiator
(DnaA)/regulator (Hda); Chromosomal replication initiator,
DnaA C-terminal;
SMART: Chromosomal replication initiator, DnaA C-terminal;
ATPase, AAA+ type, core;
SPTR: Chromosomal replication initiator protein DnaA;
TIGRFAM: Chromosomal replication control, initiator DnaA;
IMG reference gene:2504769350;
PFAM: domain; Bacterial dnaA protein;
TIGRFAM: chromosomal replication initiator protein DnaA"
/codon_start=1
/transl_table=11
/product="chromosome replication initiator DnaA"
/protein_id="YP_004444788.1"
/db_xref="GI:332662000"
/db_xref="InterPro:IPR001957"
/db_xref="InterPro:IPR010921"
/db_xref="InterPro:IPR013159"
/db_xref="InterPro:IPR013317"
/db_xref="InterPro:IPR018312"
/db_xref="InterPro:IPR020591"
/db_xref="GeneID:10590760"
/translation="MVKDHATVWESCLQNIRNNVNMQAFRTWFEPIKPVRLDGNALTI
QVPNKYFYEWLEEHYVSLLKTSIRSQLGDKGRLEYQILVSDSREEERRKSIAGNGMGN
NYSNGNGSSVSLSDQVPYYNNVDTDSIKNPFVIPGIKKMKVDPQLNPNYRFDNYIEGD
CNRLARSAGHAISRKPGQTSFNPLVIFGNVGLGKTHLAQAIGNEILDKFPTKTVLYVS
SEKFTNQIIAGIKNNAINDVVTFYQLIDVLIVDDIQFLEGKKKTQDIFFHIFNQLHQN
GKQIILTSDRPPKDLQDMEERLISRFKWGLSADLQAPDLETRIAILEYKMMQEGVEIA
QDVTEFICYNIKNNIRELEGVLISLIAQSSLNRREIDIDLAKEVVRNFVTEINKEITV
EFIQKLVADYFKVPVETLNGKTRKRSIVIARQLSMYLAKNMTDRSLKALGEVFGGRDH
STVIYSCRTVQDLMETDPFFKETVSDLEKKIRMSLSEK"
misc_feature 115..1551
/locus_tag="Halhy_0001"
/note="chromosomal replication initiation protein;
Reviewed; Region: dnaA; PRK00149"
/db_xref="CDD:178902"
misc_feature 121..312
/locus_tag="Halhy_0001"
/note="DnaA N-terminal domain; Region: DnaA_N; pfam11638"
/db_xref="CDD:204696"
misc_feature 637..1011
/locus_tag="Halhy_0001"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature 667..690
/locus_tag="Halhy_0001"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature order(670..693,856..858,958..960)
/locus_tag="Halhy_0001"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature 844..861
/locus_tag="Halhy_0001"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature 1006..1008
/locus_tag="Halhy_0001"
/note="arginine finger; other site"
/db_xref="CDD:99707"
misc_feature 1279..1548
/locus_tag="Halhy_0001"
/note="C-terminal domain of bacterial DnaA proteins. The
DNA-binding C-terminal domain of DnaA contains a
helix-turn-helix motif that specifically interacts with
the DnaA box, a 9-mer motif that occurs repetitively in
the replication origin oriC. Multiple...; Region:
Bac_DnaA_C; cd06571"
/db_xref="CDD:119330"
misc_feature order(1348..1350,1372..1377,1396..1398,1414..1422,
1447..1461,1468..1470,1477..1482)
/locus_tag="Halhy_0001"
/note="DnaA box-binding interface [nucleotide binding];
other site"
/db_xref="CDD:119330"
gene complement(1725..2378)
/locus_tag="Halhy_0002"
/db_xref="GeneID:10584152"
CDS complement(1725..2378)
/locus_tag="Halhy_0002"
/note="KEGG: dfe:Dfer_5466 hypothetical protein;
SPTR: uncharacterized protein;
IMG reference gene:2504769351"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444789.1"
/db_xref="GI:332662001"
/db_xref="GeneID:10584152"
/translation="MNDEELKALWQTQAQKLEENLLFTRKNAEEISKMKVQSALASMK
PLKIFTIIVGILWVGFVDLLIINSWPFGNLFFLVSAAIQVILTKLAIGVYLYQLVLIA
QVDLGTPVLEAQEKMARLKASTLWVTRLLFLQLPIWTTFYLNVQMLKQPLALFINLLL
TVLFTWAALWLFFNIKYENRHKKWFRLIFEGKEWTPVIQSMELLDEIRDFQVEEEYV"
misc_feature complement(<2043..>2297)
/locus_tag="Halhy_0002"
/note="RNase PH-like 3'-5' exoribonucleases; Region:
RNase_PH; cl03114"
/db_xref="CDD:243306"
gene complement(2375..2890)
/locus_tag="Halhy_0003"
/db_xref="GeneID:10584153"
CDS complement(2375..2890)
/locus_tag="Halhy_0003"
/note="COGs: COG1595 DNA-directed RNA polymerase
specialized sigma subunit sigma24 homolog;
InterPro IPR007627:IPR013249:IPR014284;
KEGG: cpi:Cpin_0328 RNA polymerase, sigma-24 subunit, ECF
subfamily;
PFAM: RNA polymerase sigma-70 region 2; RNA polymerase
sigma factor 70, region 4 type 2;
SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily;
TIGRFAM: RNA polymerase sigma-70;
IMG reference gene:2504769352;
PFAM: Sigma-70, region 4; Sigma-70 region 2;
TIGRFAM: RNA polymerase sigma factor, sigma-70 family"
/codon_start=1
/transl_table=11
/product="ECF subfamily RNA polymerase sigma-24 subunit"
/protein_id="YP_004444790.1"
/db_xref="GI:332662002"
/db_xref="InterPro:IPR007627"
/db_xref="InterPro:IPR011991"
/db_xref="InterPro:IPR013249"
/db_xref="InterPro:IPR013324"
/db_xref="InterPro:IPR013325"
/db_xref="GeneID:10584153"
/translation="MSTETPSLVFQELVEQHRGILFKVAKAYCPNEEEQQDLVQEMMI
QIWQSLHRYNPQYKISTWLYRIALNVAISHYRKNIHRQRKQSTISAHVASTPDLDASE
KEHQLKLLEQFINELKELDKALMVLYLEDRSHAEIAEIIGISVSNVATKIGRIKDKLK
QRFSQQKNQEK"
misc_feature complement(2402..2863)
/locus_tag="Halhy_0003"
/note="RNA polymerase sigma factor, sigma-70 family;
Region: sigma70-ECF; TIGR02937"
/db_xref="CDD:211770"
misc_feature complement(2657..2854)
/locus_tag="Halhy_0003"
/note="Sigma-70 region 2; Region: Sigma70_r2; pfam04542"
/db_xref="CDD:146937"
misc_feature complement(2411..2566)
/locus_tag="Halhy_0003"
/note="Sigma70, region (SR) 4 refers to the most
C-terminal of four conserved domains found in Escherichia
coli (Ec) sigma70, the main housekeeping sigma, and
related sigma-factors (SFs). A SF is a dissociable subunit
of RNA polymerase, it directs bacterial or...; Region:
Sigma70_r4; cd06171"
/db_xref="CDD:100119"
misc_feature complement(order(2423..2425,2429..2434,2438..2446,
2450..2455,2459..2461,2489..2494,2537..2539))
/locus_tag="Halhy_0003"
/note="DNA binding residues [nucleotide binding]"
/db_xref="CDD:100119"
gene 3126..4547
/locus_tag="Halhy_0004"
/db_xref="GeneID:10584154"
CDS 3126..4547
/locus_tag="Halhy_0004"
/note="COGs: COG5337 Spore coat assembly protein;
InterPro IPR014867;
KEGG: gau:GAU_1784 hypothetical protein;
PFAM: Spore coat protein CotH;
SPTR: uncharacterized protein;
IMG reference gene:2504769353;
PFAM: CotH protein"
/codon_start=1
/transl_table=11
/product="spore coat protein CotH"
/protein_id="YP_004444791.1"
/db_xref="GI:332662003"
/db_xref="InterPro:IPR014867"
/db_xref="GeneID:10584154"
/translation="MKYSALVAIVFLGFLGINSCSKDAAIDNPDRDVTEVDPQSYNPD
WAESSHGNVTPDYATAFPQSSVNQIEITLGTNKWTAIRNNMKAIFGYDFGARANAGGG
MVNTESEYVDATLKFNNKTWKNVGFRLKGNSTLNQAWGQGNYKLPFRLNFDKFEDEYP
GIKNQHFYGFEELTFSPGAKDQSLIREKVAADIFRMAGVPAAQTAFYRVYIDFGAGMK
YCGVYTAVEIPEDKMVKSQFGEEKGNVYKPESRLATFIQAEFEKKNNEEAADYTDVQA
FISALNSSTRSSNPIQWRSNLEATFHVDHYLKYLAVNNAIVNWDSYGAIAHNYYLYNH
TQNKLTWIPWDHNEALSGSPGISGSVSSGPGGMGRNAVSLSMNEVSSTWPLLKYVAED
PTYLATYKSYLKSFKDNVFTESAMNALFEKYHSLISPYVVGANGEQGGYTYLSSSTSF
AAALSELKAHVSNRRVLISSYVP"
misc_feature 3507..4448
/locus_tag="Halhy_0004"
/note="CotH protein; Region: CotH; pfam08757"
/db_xref="CDD:149727"
gene complement(4642..5334)
/locus_tag="Halhy_0005"
/db_xref="GeneID:10584155"
CDS complement(4642..5334)
/locus_tag="Halhy_0005"
/note="COGs: COG2836 conserved hypothetical protein;
KEGG: cpi:Cpin_0686 hypothetical protein;
SPTR: Membrane protein, ;
IMG reference gene:2504769354"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444792.1"
/db_xref="GI:332662004"
/db_xref="GeneID:10584155"
/translation="MLYSAFLLGFLGSLHCVGMCGPIALALPNASKGWGAVAGALLYN
LGRILTYLLLGLIIGAFGRGLFLAGVQSWFSVILGILLIVVAVLSLNIESYIKQFPPV
QRLQNWVSRNMAKLLRREGLQTNFLIGALNGLLPCGLVYVAIAGAVLSDTWIQSALYM
GGFGAGTLPLMLGTALAGQFISLNWRQRLRRLSPILLGLFGLYFMARGINFHLPETMR
FWEIGQEIPVCH"
misc_feature complement(4726..5325)
/locus_tag="Halhy_0005"
/note="Family description; Region: DsbD_2; pfam13386"
/db_xref="CDD:205564"
gene complement(5339..5779)
/locus_tag="Halhy_0006"
/db_xref="GeneID:10584156"
CDS complement(5339..5779)
/locus_tag="Halhy_0006"
/note="KEGG: lby:Lbys_2756 FixH family protein;
SPTR: uncharacterized protein;
IMG reference gene:2504769355;
PFAM: FixH"
/codon_start=1
/transl_table=11
/product="nitrogen fixation protein FixH"
/protein_id="YP_004444793.1"
/db_xref="GI:332662005"
/db_xref="InterPro:IPR008620"
/db_xref="GeneID:10584156"
/translation="MKFNWGTGIAVFYSLFVITMVYSVYRSTQFDNSLVSDQYYADDL
KYQERFDKLSNAQSLKQDLEIQTAESGSQVELFFPGELGRVHGEIHFFCPSDQGSDFK
VNIAPNLNHRQVISTSGLKSGLWRVKVDWSDGKKAYYKEEVIQI"
misc_feature complement(5345..5770)
/locus_tag="Halhy_0006"
/note="FixH; Region: FixH; pfam05751"
/db_xref="CDD:147738"
gene complement(5876..7396)
/locus_tag="Halhy_0007"
/db_xref="GeneID:10584157"
CDS complement(5876..7396)
/locus_tag="Halhy_0007"
/note="COGs: COG0348 Polyferredoxin;
InterPro IPR001450:IPR014116;
KEGG: chu:CHU_1141 ferredoxin;
PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup;
SPTR: Cytochrome c oxidase accessory protein CcoG;
TIGRFAM: Cytochrome c oxidase cbb3 type, accessory protein
FixG;
IMG reference gene:2504769356;
PFAM: Ubp3 associated protein Bre5;
TIGRFAM: cytochrome c oxidase accessory protein FixG"
/codon_start=1
/transl_table=11
/product="cytochrome c oxidase accessory protein CcoG"
/protein_id="YP_004444794.1"
/db_xref="GI:332662006"
/db_xref="InterPro:IPR012285"
/db_xref="InterPro:IPR013783"
/db_xref="InterPro:IPR017896"
/db_xref="InterPro:IPR017900"
/db_xref="GeneID:10584157"
/translation="MREITPFEDSEEYRDHIATVDDRGKRIWVYPKKPKGKFTSARTY
LSCAFLIFLFGAPFVKINGEPMLLFDILKRHFIIFGVNFAPQDFHLFVLAMLTFVVFI
ILFTVIYGRLFCGWVCPQTVFMEMVFRKIEYWIEGDANAQRRLNNAPWTNEKILKKGA
KQAIFFAISVLIANTFLAYIIGLDEVLKIASEPVSQNLAGFIALMVFSFAFFFVFSWM
REQICIAICPYGRLQGVLLDKSSIVVHYDHVRGEPRGKIKRDAPKPESPLTSIQSSVR
QSEQAVALEMVEALPNAANPIEAVQKSLGDCIDCKLCIHVCPTGIDIRNGTQLECVNC
TACIDACDEVMDKVQRPRGLIRYASATSIETKTQKIFTTRVKAYTVVLALMVILNIVL
LSTRSEVEVLLLRTPGMLYQKVGTTHISNLYNYEIINKTRDTFPVEFRLVNPSGRVKL
IGKTPFTKASDITKGAMFVEIERKKLTGRKTRIEVDIYSNGKKLDRVKTNFLGPMN"
misc_feature complement(5888..7285)
/locus_tag="Halhy_0007"
/note="cytochrome c oxidase accessory protein FixG;
Region: ccoG_rdxA_fixG; TIGR02745"
/db_xref="CDD:162996"
misc_feature complement(7004..7126)
/locus_tag="Halhy_0007"
/note="4Fe-4S binding domain; Region: Fer4_5; pfam12801"
/db_xref="CDD:205081"
misc_feature complement(5885..6229)
/locus_tag="Halhy_0007"
/note="Ubp3 associated protein Bre5; Region: Bre5;
pfam11614"
/db_xref="CDD:204690"
gene complement(7513..8427)
/locus_tag="Halhy_0008"
/db_xref="GeneID:10584158"
CDS complement(7513..8427)
/locus_tag="Halhy_0008"
/note="InterPro IPR003088;
KEGG: fbc:FB2170_03705 cytochrome-c oxidase FixP chain;
PFAM: Cytochrome c, class I;
SPTR: Cytochrome-c oxidase fixP chain;
IMG reference gene:2504769357;
PFAM: Cytochrome c;
TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III"
/codon_start=1
/transl_table=11
/product="cytochrome c class I"
/protein_id="YP_004444795.1"
/db_xref="GI:332662007"
/db_xref="InterPro:IPR003088"
/db_xref="InterPro:IPR009056"
/db_xref="GeneID:10584158"
/translation="MKKNKLKKQIVITIIALFSSSLAFAQGAAATASGTSQANSEVYN
SLLSNGLIFFAGLTMLGAVLALFHLLSMMIKVQQIKIYQEQGIEAYQEKVKESQEPLW
KRQYKAWTNVVPIEKENTVMLDHNYDGIKELDNSLPPWWVAMFYITIFLGVIFFAYYH
VLGGPSQADEYNAEMKVAEQAKAAFAATQANQIDEDNLEASTDPQDLAIGKTIYATNC
VACHLANGEGSVGPNLTDEFWIHGGGITNIYKTVKNGVPEKGMIAWSAQLKPADMYKV
SSYILSLQGTNPPNAKAPQGDKYVPETE"
misc_feature complement(<7549..8055)
/locus_tag="Halhy_0008"
/note="cytochrome c oxidase, cbb3-type, subunit III;
Region: ccoP; TIGR00782"
/db_xref="CDD:129864"
misc_feature complement(7588..7815)
/locus_tag="Halhy_0008"
/note="Cytochrome C oxidase, cbb3-type, subunit III;
Region: Cytochrome_CBB3; pfam13442"
/db_xref="CDD:205620"
gene complement(8414..8617)
/locus_tag="Halhy_0009"
/db_xref="GeneID:10584159"
CDS complement(8414..8617)
/locus_tag="Halhy_0009"
/note="IMG reference gene:2504769358"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444796.1"
/db_xref="GI:332662008"
/db_xref="GeneID:10584159"
/translation="MYKYILEGVGDINWMAISALLTFVAVFTVSAVMAFRSPLAYLNK
MSNLPLDDSILQTSETDIRHEEK"
gene complement(8702..10834)
/locus_tag="Halhy_0010"
/db_xref="GeneID:10584160"
CDS complement(8702..10834)
/locus_tag="Halhy_0010"
/note="COGs: COG3278 Cbb3-type cytochrome oxidase subunit
1;
InterPro IPR000883:IPR003468:IPR004677;
KEGG: mtt:Ftrac_1616 cytochrome c oxidase, cbb3-type,
subunit I;
PFAM: Cytochrome C oxidase, monohaem subunit/FixO;
Cytochrome c oxidase, subunit I;
PRIAM: Cytochrome-c oxidase;
SPTR: Cytochrome c oxidase, cbb3-type;
TIGRFAM: Cytochrome c oxidase cbb3-type, subunit I;
Cytochrome C oxidase, monohaem subunit/FixO;
IMG reference gene:2504769359;
PFAM: Cytochrome C oxidase, mono-heme subunit/FixO;
Cytochrome C and Quinol oxidase polypeptide I;
TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II;
cytochrome c oxidase, cbb3-type, subunit I"
/codon_start=1
/transl_table=11
/product="cytochrome c oxidase, cbb3-type subunit I"
/protein_id="YP_004444797.1"
/db_xref="GI:332662009"
/db_xref="InterPro:IPR000883"
/db_xref="InterPro:IPR003468"
/db_xref="InterPro:IPR009056"
/db_xref="GeneID:10584160"
/translation="MAQVETFYYDNAIVRKFTYATMLWSVVGMLVGLIAAFQLIMPDL
NLGIPYTTFGRIRPLHTNAAIFAFVGNGIFMGVYYSLQRLLKTRMFSNTLSNIHFWGW
QLIIVLAAVTLPLGITSSKEYAELEWPIDIAIALVWVVFGINMFGTIIKRRENHMYVA
IWFYIATWITVTVLHIGNNIEIPVSATKSYGIFAGVQDALVQWWYGHNAVAFFLTTPY
LGLMYYFLPKAANRPVYSYRLSIIHFWALIFIYIWAGPHHLLYTSLPDWAQSLGSVFS
IMLIAPSWGGMLNGLLTLRGAWDRVRQDPVLKFMVVAITAYGMATFEGPMLSIKSVNA
ISHFTDWTIGHVHIGTLGWNGFLTFGILYWLIPRLFNTNLYSLKLANAHFWIGTLGIA
FYAIPLYWAGWAQSLMWKEFTPDGFLKYGNFLETVTQIMPMYYLRALGGTLFFAGTLV
MIYNLIKTIKQGAFIGDEAAEAPARVATADVHKGEHWHRWIERRPMQMLILSAIAILI
GGIIEITPMVMIESNVPKIASVKPYTPLELHGRDLYIREGCVGCHSQMVRPFRSETER
YGEYSKSGEYIYDRPFLWGSKRTGPDLHREGGKYPDSWHYNHMVDPQSMSPGSIMPPY
PWMLRDEMDLGTLPRKIKVLRSLGTPYPAGFEDRAVADLKEQAAGIAARLRADGIEDE
KLEKRDIIALIAYLQRLGTDIKPKAATN"
misc_feature complement(8717..10831)
/locus_tag="Halhy_0010"
/note="putative bifunctional cbb3-type cytochrome c
oxidase subunit I/II; Provisional; Region: PRK14485"
/db_xref="CDD:184703"
misc_feature complement(9458..10831)
/locus_tag="Halhy_0010"
/note="Cytochrome cbb3 oxidase subunit I. Cytochrome cbb3
oxidase, the terminal oxidase in the respiratory chains of
proteobacteria, is a multi-chain transmembrane protein
located in the cell membrane. Like other cytochrome
oxidases, it catalyzes the reduction...; Region:
cbb3_Oxidase_I; cd01661"
/db_xref="CDD:29932"
misc_feature complement(order(9539..9541,9653..9655,9782..9784,
9794..9796,10787..10789))
/locus_tag="Halhy_0010"
/note="Low-spin heme binding site [chemical binding];
other site"
/db_xref="CDD:29932"
misc_feature complement(order(9608..9610,9821..9826,9836..9838,
10235..10240,10253..10255))
/locus_tag="Halhy_0010"
/note="Putative water exit pathway; other site"
/db_xref="CDD:29932"
misc_feature complement(order(9800..9802,10061..10066,10214..10216))
/locus_tag="Halhy_0010"
/note="Binuclear center (active site) [active]"
/db_xref="CDD:29932"
misc_feature complement(order(9605..9610,9821..9826,10061..10063))
/locus_tag="Halhy_0010"
/note="Putative proton exit pathway; other site"
/db_xref="CDD:29932"
misc_feature complement(8723..9373)
/locus_tag="Halhy_0010"
/note="Cytochrome C oxidase, mono-heme subunit/FixO;
Region: FixO; pfam02433"
/db_xref="CDD:111339"
gene complement(10847..11008)
/locus_tag="Halhy_0011"
/db_xref="GeneID:10584161"
CDS complement(10847..11008)
/locus_tag="Halhy_0011"
/note="InterPro IPR004714;
KEGG: dfe:Dfer_5324 cytochrome oxidase maturation protein,
cbb3-type;
PFAM: Cytochrome oxidase maturation protein cbb3-type;
SPTR: Cytochrome oxidase maturation protein, cbb3-type;
TIGRFAM: Cytochrome oxidase maturation protein cbb3-type;
IMG reference gene:2504769360;
PFAM: Cytochrome oxidase maturation protein cbb3-type;
TIGRFAM: cytochrome oxidase maturation protein, cbb3-type"
/codon_start=1
/transl_table=11
/product="cbb3-type cytochrome oxidase maturation protein"
/protein_id="YP_004444798.1"
/db_xref="GI:332662010"
/db_xref="InterPro:IPR004714"
/db_xref="GeneID:10584161"
/translation="MTVIFLLILVSLILALGFLGAFFWAVKGGQYDDDYTPSVRILLE
DDKPTDTKL"
misc_feature complement(10871..>10939)
/locus_tag="Halhy_0011"
/note="Cytochrome oxidase maturation protein cbb3-type;
Region: CcoS; pfam03597"
/db_xref="CDD:202697"
gene complement(11194..12045)
/locus_tag="Halhy_0012"
/db_xref="GeneID:10584162"
CDS complement(11194..12045)
/locus_tag="Halhy_0012"
/note="COGs: COG0412 Dienelactone hydrolase;
InterPro IPR002925;
KEGG: hch:HCH_00119 dienelactone hydrolase;
PFAM: Dienelactone hydrolase;
PRIAM: Carboxymethylenebutenolidase;
SPTR: Dienelactone hydrolase and related enzyme;
IMG reference gene:2504769361;
PFAM: Dienelactone hydrolase"
/codon_start=1
/transl_table=11
/product="carboxymethylenebutenolidase"
/protein_id="YP_004444799.1"
/db_xref="GI:332662011"
/db_xref="InterPro:IPR002925"
/db_xref="GeneID:10584162"
/translation="MDQRIINLYDEYTHKPLTRKAFMQQLVMLTGSTAAAMSLLPMLE
SDYNTANITTEGELFTEYITYPGVQGEMKAYVARPEKKKKYPAVLVIHENRGLNAHIE
DVARRAANAGYLAIAPNALAPLTKPGMTEDEARQLFSTLKAEDNTANFMSCIDYLPAR
EDWNGKFGCVGFCWGGAMANTLAVKVPALGAAVAFYGRQPDAKDVPNIKAAVQLHYGS
LDERVNAGMAAYEEALKANKITYEQYVYEGVNHAFHNDTSEARYNAESAKLAWDRTIA
FFKKHIG"
misc_feature complement(11197..11865)
/locus_tag="Halhy_0012"
/note="Dienelactone hydrolase and related enzymes
[Secondary metabolites biosynthesis, transport, and
catabolism]; Region: COG0412"
/db_xref="CDD:30761"
misc_feature complement(11197..>11310)
/locus_tag="Halhy_0012"
/note="Esterases and lipases (includes fungal lipases,
cholinesterases, etc.) These enzymes act on carboxylic
esters (EC: 3.1.1.-). The catalytic apparatus involves
three residues (catalytic triad): a serine, a glutamate or
aspartate and a histidine.These...; Region:
Esterase_lipase; cl12031"
/db_xref="CDD:211462"
gene complement(12054..12740)
/locus_tag="Halhy_0013"
/db_xref="GeneID:10584163"
CDS complement(12054..12740)
/locus_tag="Halhy_0013"
/note="COGs: COG4636 conserved hypothetical protein;
InterPro IPR008538;
KEGG: sli:Slin_1327 protein of unknown function DUF820;
PFAM: Protein of unknown function DUF820;
SPTR: uncharacterized protein;
IMG reference gene:2504769362;
PFAM: Protein of unknown function (DUF820)"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444800.1"
/db_xref="GI:332662012"
/db_xref="InterPro:IPR008538"
/db_xref="InterPro:IPR011335"
/db_xref="InterPro:IPR012296"
/db_xref="GeneID:10584163"
/translation="MPSTSLEKDLLEIPDLPMLLERLHHRLDDEKIQRQEFRSWVSDE
VKAEFINGQVVMHSPAADDHNEATGHLYRAVSFYVDLHKLGKVRVEKALIGMTRNDYE
PDIAFWRKEIANRFHPEMNVYPTPDLVIEVLLPGKENIKRDTVTKFADYASHGIPEYW
IVDPKKKSVEQYLLSDTQTGTYELFKKVTINDYIESVLLPGFIISVKAIFDAEENALT
IQKFLTNIKE"
misc_feature complement(12129..12608)
/locus_tag="Halhy_0013"
/note="Domain of unknown function (DUF820). This family
consists of hypothetical proteins that are greatly
expanded in cyanobacteria. The proteins are found
sporadically in other bacteria. They have been predicted
to belong to the PD-(D/E)xK superfamily of...; Region:
DUF820; cd06260"
/db_xref="CDD:99749"
misc_feature complement(order(12288..12290,12300..12302,12348..12350,
12429..12431,12549..12551))
/locus_tag="Halhy_0013"
/note="putative active site [active]"
/db_xref="CDD:99749"
gene 12870..13634
/locus_tag="Halhy_0014"
/db_xref="GeneID:10584164"
CDS 12870..13634
/locus_tag="Halhy_0014"
/note="InterPro IPR002559;
KEGG: sli:Slin_3747 transposase IS4 family protein;
PFAM: Transposase, IS4-like;
SPTR: Transposase IS4 family protein;
IMG reference gene:2504769363;
PFAM: Transposase DDE domain"
/codon_start=1
/transl_table=11
/product="transposase IS4 family protein"
/protein_id="YP_004444801.1"
/db_xref="GI:332662013"
/db_xref="InterPro:IPR002559"
/db_xref="GeneID:10584164"
/translation="MTGKYQRMTDPQWEVIAKYLPVQRKREINLRDVMDAIRFIVCTG
IQWRNLPEYFPKWNAVYYYFQKWTADQTLFRLNAALNELDRINQGKEAKPSLLLVDSQ
SVKLAPMIGTDRGFDAHKKINGRKRQLLTDSEGRIWDACAHAANLYDADGASLLFDES
RMELWWPRLQKFLTDQHYQGTFSVMATDLGIHFEIRGKIGDAKGFEVIPIRWVIERTI
SWSNFCRRLVKDYERTIQNSVSWTICSNIYRILRRV"
misc_feature 12891..13103
/locus_tag="Halhy_0014"
/note="Putative transposase of IS4/5 family (DUF4096);
Region: DUF4096; pfam13340"
/db_xref="CDD:205520"
misc_feature 13140..13592
/locus_tag="Halhy_0014"
/note="Transposase DDE domain; Region: DDE_Tnp_1;
pfam01609"
/db_xref="CDD:201886"
misc_feature <13431..13592
/locus_tag="Halhy_0014"
/note="Transposase DDE domain; Region: DDE_Tnp_1_2;
pfam13586"
/db_xref="CDD:205764"
gene complement(13682..15574)
/locus_tag="Halhy_0015"
/db_xref="GeneID:10584165"
CDS complement(13682..15574)
/locus_tag="Halhy_0015"
/note="InterPro IPR011647;
KEGG: cki:Calkr_1515 kwg repeat protein;
PFAM: KWG Leptospira;
SPTR: KWG repeat domain protein;
IMG reference gene:2504769364;
PFAM: KWG Leptospira"
/codon_start=1
/transl_table=11
/product="KWG repeat-containing protein"
/protein_id="YP_004444802.1"
/db_xref="GI:332662014"
/db_xref="InterPro:IPR011647"
/db_xref="GeneID:10584165"
/translation="MKNIKFFLFLVCSFYLCSSSNGQNNLLKIIENQRYGYIDTSGKK
IIPAIYHNLGECKEGLIAARENGLFGYIDPAGKYQIEPRFEYATAFSQGLALVYDQGI
PYFINKQGEKVISSIGEAMNSFECGVAHVFTSSGKVGLIDSKGSFVLDTLYDYIGSFD
QGVAVVSIHKKDFVTRYDAKYGVIDSTGKFIVPFGFYAEIEGFNNGLAKVLGKRKDWQ
GLIDRKGKLILRISKGELDLYNIDQLERIQVLLDQKVKKDDLSSLYHGFVNKKGELVI
NNPANRWVTSFSKSRAFVHENDLWHLVDTNGTKVHPEAFDEVLDGIFVDGITWVKRKE
SSFWESIDQTGRTLFKSNFKAINRIPNSDLLMYNDPLLDEKTESLIDRFGLASANGAI
ITSAIYAHFDRNGYRNGALLVIEDERYMYITRDGKSIWQEPKHTQNCVLNIDYMLRGS
FYAASERHPSDNGGFAKNDNFPQAIPAGLDFEQGLSISIRQNQSITEDCHSVIFISNL
SDSNQYFNAQDGRLYMKLQAKDSAGQWRDIEYLPSSWCGNSYHTLILRSQTYWYFPMP
NFEGSFSTVLRAELKVIDPTDMSSDKVKREYTIYSHEFQGAVNPAQFWRKLEYSPLGL
MDPYVE"
gene complement(15754..17265)
/locus_tag="Halhy_0016"
/db_xref="GeneID:10584166"
CDS complement(15754..17265)
/locus_tag="Halhy_0016"
/note="COGs: COG1292 Choline-glycine betaine transporter;
InterPro IPR000060;
KEGG: has:Halsa_0523 BCCT transporter;
PFAM: BCCT transporter;
SPTR: BCCT transporter;
IMG reference gene:2504769365;
PFAM: BCCT family transporter"
/codon_start=1
/transl_table=11
/product="BCCT transporter"
/protein_id="YP_004444803.1"
/db_xref="GI:332662015"
/db_xref="InterPro:IPR000060"
/db_xref="GeneID:10584166"
/translation="MPKIKLPVFLPPAILLVVSMLYSLYDPADFLVQVKAANDWILYH
FGWLFSGGTLVFLLLCVWIYFSPLAKVRIGGKNAQPILTRWQWFSITLCTTIAIGILF
WATAEPLYHLHTPPGGIGVKANSPESARFAMSTMFLHWTFTPYSIYTVAGLMFAIAYY
NLKQPFSLGSMLFPLIGERKPGAWSHAIDAICLYSLVAGMAASLGAGILTVAGGMERF
FGLKDSPMLLLLIALVIVASFIISAITGLFNGIRILSNINTYAFFVLALFVLVFGPTR
YLFQYGIEGMGDYASTFFPRSLSLQVDKSWADSWTVFYWANWLAWTPVTALFLGRVAI
GYTVRDFIHYNLILPSLFSVVWMVIFSGSAIHMDFVAHTANLYGTLQSQGPESVIYGV
LDQLPLAELTGLSFLATAFLSYVAGADANTSAMSSLSSSGISPESPEAPVWIKIVWGS
LVGLIAWVMVANAGIEGIKMASTLGGFPALFLVLAVALGLVKILLKPGRYVLE"
misc_feature complement(15832..17244)
/locus_tag="Halhy_0016"
/note="BCCT family transporter; Region: BCCT; pfam02028"
/db_xref="CDD:145290"
gene 17341..18168
/locus_tag="Halhy_0017"
/db_xref="GeneID:10584167"
CDS 17341..18168
/locus_tag="Halhy_0017"
/note="COGs: COG0491 Zn-dependent hydrolase including
glyoxylase;
KEGG: phe:Phep_3002 beta-lactamase domain protein;
SPTR: Beta-lactamase domain protein;
IMG reference gene:2504769366;
PFAM: Metallo-beta-lactamase superfamily"
/codon_start=1
/transl_table=11
/product="beta-lactamase domain-containing protein"
/protein_id="YP_004444804.1"
/db_xref="GI:332662016"
/db_xref="InterPro:IPR001279"
/db_xref="GeneID:10584167"
/translation="MKLISINSGFFKLDGGAMFGVVPKRMWQKLSTPDENNLCTWAMR
CLLIDTGERKILVDTGIGTKQDPKFRSHFIPWGQDVFLQDLAAKGYRAEDITDVLLTH
LHFDHVGGAIQLDAKGNPEPTFPKARYWSNPLHFAWAERPNAREAASFLKENFMPLRD
WGLLEMIDPSDKDVEWLPGIRLRFVNGHTEAMMLPIIDTPEGSVVYCADLIPSAWHIR
MPYIMAYDVRPLETLREKEFLLDEAVDGNYTLLFEHDPIRESGRVVRDQNGAVILDS"
misc_feature 17368..18141
/locus_tag="Halhy_0017"
/note="Zn-dependent hydrolases, including glyoxylases
[General function prediction only]; Region: GloB; COG0491"
/db_xref="CDD:30837"
misc_feature 17473..17979
/locus_tag="Halhy_0017"
/note="Metallo-beta-lactamase superfamily; Region:
Lactamase_B; pfam00753"
/db_xref="CDD:201425"
gene complement(18175..18246)
/locus_tag="Halhy_R0001"
/db_xref="GeneID:10584168"
tRNA complement(18175..18246)
/locus_tag="Halhy_R0001"
/product="tRNA-Asn"
/note="IMG reference gene:2504769367"
/db_xref="GeneID:10584168"
gene complement(18334..19074)
/locus_tag="Halhy_0018"
/db_xref="GeneID:10584169"
CDS complement(18334..19074)
/locus_tag="Halhy_0018"
/note="COGs: COG3279 Response regulator of the LytR/AlgR
family;
InterPro IPR001789:IPR007492;
KEGG: dfe:Dfer_0733 two component transcriptional
regulator, LytTR family;
PFAM: Signal transduction response regulator, receiver
region; LytTr DNA-binding region;
SMART: Signal transduction response regulator, receiver
region;
SPTR: Two-component system response regulator protein;
IMG reference gene:2504769368;
PFAM: Response regulator receiver domain; LytTr
DNA-binding domain"
/codon_start=1
/transl_table=11
/product="LytTR family two component transcriptional
regulator"
/protein_id="YP_004444805.1"
/db_xref="GI:332662017"
/db_xref="InterPro:IPR001789"
/db_xref="InterPro:IPR007492"
/db_xref="InterPro:IPR011006"
/db_xref="GeneID:10584169"
/translation="MITPEVSTPQMYRCLIVDDEPQARVVLRRHIEALDMLQLVGECP
NALAAFQILQQQELDLLFLDIQMPRVSGLELLRSLQHPPKVIFTTAHREHAAEAYELD
VVDYLLKPVAFERFLKAIQKAFRFVPLPLAEDHQSNPGQAPFLYFRADRRMIKVFLHE
ILHVESLKDYVRIVTIKGESIVTKQSISGLESTLPAHRFFRIHRSFIVNLQHVSAFNA
TEVEMGTQKLPVGRLYRSAWLELNKTFL"
misc_feature complement(18364..19044)
/locus_tag="Halhy_0018"
/note="Response regulator of the LytR/AlgR family
[Transcription / Signal transduction mechanisms]; Region:
LytT; COG3279"
/db_xref="CDD:33090"
misc_feature complement(18703..19032)
/locus_tag="Halhy_0018"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature complement(order(18745..18750,18757..18759,18808..18810,
18859..18861,18883..18885,19018..19023))
/locus_tag="Halhy_0018"
/note="active site"
/db_xref="CDD:29071"
misc_feature complement(18883..18885)
/locus_tag="Halhy_0018"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature complement(order(18859..18867,18871..18876))
/locus_tag="Halhy_0018"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature complement(18742..18750)
/locus_tag="Halhy_0018"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
misc_feature complement(18364..18624)
/locus_tag="Halhy_0018"
/note="LytTr DNA-binding domain; Region: LytTR;
smart00850"
/db_xref="CDD:197918"
gene complement(19071..20168)
/locus_tag="Halhy_0019"
/db_xref="GeneID:10584170"
CDS complement(19071..20168)
/locus_tag="Halhy_0019"
/note="COGs: COG3275 regulator of cell autolysis;
InterPro IPR010559;
KEGG: dfe:Dfer_4523 signal transduction histidine kinase,
LytS;
PFAM: Signal transduction histidine kinase, internal
region;
SPTR: Signal transduction histidine kinase, LytS;
IMG reference gene:2504769369;
PFAM: Histidine kinase"
/codon_start=1
/transl_table=11
/product="signal transduction histidine kinase"
/protein_id="YP_004444806.1"
/db_xref="GI:332662018"
/db_xref="InterPro:IPR010559"
/db_xref="GeneID:10584170"
/translation="MLESLVFSPRWTFRLGRHLLYWLFWWFLLALIYGTKFALEDPNI
WWGINRSYWIAAMDMSPNLLAIALFMYGLQYGIIPHTYPRGKWLLLAVGSLLLAAVCI
TIETQIALHVINPWKQIIGRSFNVGWMAYFFAFTNLLKHGSATSGLAAAIRLLKQNLR
EREINSQLQQRQLETELEMLRLQLHPHFLFNNLNNIYGLIMDGDKRQAGDVVIRLSGL
LRYMLHESAAPLVPLDKELEHLHSYVLLEQIRCADRLELGYSVQGKAAGKQIAPLILL
PFVENSFKHGLANALEGGWINIDIQIREHSLHCWIANSKPEQVETTNGCGIGLKNSRK
RLELLYPNQYTLKIADLEDSFSVTLEIPLHT"
misc_feature complement(19398..19616)
/locus_tag="Halhy_0019"
/note="Histidine kinase; Region: His_kinase; pfam06580"
/db_xref="CDD:203479"
gene 20413..20838
/locus_tag="Halhy_0020"
/db_xref="GeneID:10584171"
CDS 20413..20838
/locus_tag="Halhy_0020"
/note="KEGG: cse:Cseg_0880 dehydrogenase;
SPTR: dehydrogenase;
IMG reference gene:2504769370"
/codon_start=1
/transl_table=11
/product="dehydrogenase"
/protein_id="YP_004444807.1"
/db_xref="GI:332662019"
/db_xref="GeneID:10584171"
/translation="MKTRLLFFILLLCASVLQLHAQTENPEMKAVEKTLRAYMEGDSL
QFASAFHPEGQMMYIKDEKLTVVPLSEFRTRGKNGKKPERKTRILGIQIYGNAAQAQL
ELETSELIFHDYMSLLKTPEGWKIVSKIFYREDKKKGGS"
misc_feature 20488..20808
/locus_tag="Halhy_0020"
/note="Putative lumazine-binding; Region: Lumazine_bd_2;
pfam12893"
/db_xref="CDD:205129"
gene complement(20846..21406)
/locus_tag="Halhy_0021"
/db_xref="GeneID:10584172"
CDS complement(20846..21406)
/locus_tag="Halhy_0021"
/note="KEGG: ppn:Palpr_1034 hypothetical protein;
SPTR: uncharacterized protein;
IMG reference gene:2504769371"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444808.1"
/db_xref="GI:332662020"
/db_xref="GeneID:10584172"
/translation="MPIDTPLTLKFERKSGRYQAKMYNPGNFIDYPSAPIFILDGKVT
RDADFVARLKTNQIEQIDLFYQPDQLFANFKAIGRSGVVNIRSKSGMAIPADEEADVF
RINGLQTPVEFPTLLSDQLRTKTGQPFFRPQVYWNPNLETDAQGLARFSFVQTDDWSH
FRIEVLVQAENGAFGRVVAEYTVKGK"
gene 21675..22985
/locus_tag="Halhy_0022"
/db_xref="GeneID:10584173"
CDS 21675..22985
/locus_tag="Halhy_0022"
/note="KEGG: sli:Slin_3122 hypothetical protein;
SPTR: uncharacterized protein;
IMG reference gene:2504769372"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444809.1"
/db_xref="GI:332662021"
/db_xref="InterPro:IPR011040"
/db_xref="GeneID:10584173"
/translation="MIKLFASFYLILVSFVAFFNPQPVEKAEPMGAMPMCNTLPEGEE
SQLSAVAPAVVVQPVETSTAGLELDTAKIYSMPLLSKTQSNDVMLTWTEKDAQGMVSL
CLAISRDFGKNFSEKKIIYSGTGIGNSRLMRAKVLSKKDGTLVAVFSNRTAAPATSTP
PKRGGRSLDIVYAESKDGGNTWTSPQSVDADKTTGIVRGFFDAILMSNDEVAVAYLKD
VANSTKHEERDLRLVITKNGVFQPERVIDPVVCDCCNINLLVDANGALNVYYRDNNDD
IRDIARMTSFDNAETFSKPQIVHDDQWKINGCPHSGATSIKSGKSTLIAWFSGTDKEP
GIRLVTNEGKKLLILADPTAKNVFLLGTAQTSVMLWEQVQGEIPQLAYRKIKNNSVSE
TAWIEGSANGSNPCGLVVDGQLLLAYEVKQGTGKPQLKLSTVGI"
misc_feature 21861..>22277
/locus_tag="Halhy_0022"
/note="Sialidases or neuraminidases function to bind and
hydrolyze terminal sialic acid residues from various
glycoconjugates as well as playing roles in pathogenesis,
bacterial nutrition and cellular interactions. They have a
six-bladed, beta-propeller fold...; Region: Sialidase;
cl01922"
/db_xref="CDD:92329"
gene 22982..23170
/locus_tag="Halhy_0023"
/db_xref="GeneID:10584174"
CDS 22982..23170
/locus_tag="Halhy_0023"
/note="IMG reference gene:2504769373"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444810.1"
/db_xref="GI:332662022"
/db_xref="GeneID:10584174"
/translation="MIFFELPDFLVWVGYTAHTKILDEILYFSVSGTDDQQDKANQQH
FIAILRQLINSDEVRQNA"
gene complement(23316..23867)
/locus_tag="Halhy_0024"
/db_xref="GeneID:10584175"
CDS complement(23316..23867)
/locus_tag="Halhy_0024"
/note="COGs: COG2128 conserved hypothetical protein;
InterPro IPR003779:IPR010195;
KEGG: aca:ACP_0439 peroxidase;
PFAM: Carboxymuconolactone decarboxylase;
SPTR: Peroxidase;
TIGRFAM: Uncharacterised peroxidase-related;
IMG reference gene:2504769374;
PFAM: Carboxymuconolactone decarboxylase;
TIGRFAM: uncharacterized peroxidase-related enzyme;
alkylhydroperoxidase AhpD family core domain"
/codon_start=1
/transl_table=11
/product="peroxidase-like protein"
/protein_id="YP_004444811.1"
/db_xref="GI:332662023"
/db_xref="InterPro:IPR003779"
/db_xref="GeneID:10584175"
/translation="MAYINVPEGLPGIRGLMAFRPETAHYINGLAEVLLRDDDNTLSR
GERELIATYVSHLNDCFFCQNAHGGIAQHYLQCDMEFIDNIKADYAAMPISDKLKALL
SIAESVQRGGKAVRPEQIDTAKNLGATEKEIHDTVLISALFCMCNRYVDGLGTSANPD
RQFYVDRGKLRAEEGYLHFDPHQ"
misc_feature complement(<23655..23807)
/locus_tag="Halhy_0024"
/note="Carboxymuconolactone decarboxylase family; Region:
CMD; pfam02627"
/db_xref="CDD:202318"
misc_feature complement(23436..>23588)
/locus_tag="Halhy_0024"
/note="Carboxymuconolactone decarboxylase family; Region:
CMD; cl00460"
/db_xref="CDD:213098"
gene complement(23973..24518)
/locus_tag="Halhy_0025"
/db_xref="GeneID:10584176"
CDS complement(23973..24518)
/locus_tag="Halhy_0025"
/note="COGs: COG2128 conserved hypothetical protein;
InterPro IPR003779:IPR010195:IPR004675;
KEGG: tcu:Tcur_4562 peroxidase-like protein;
PFAM: Carboxymuconolactone decarboxylase;
SPTR: Uncharacterized peroxidase-related enzyme;
TIGRFAM: Uncharacterised peroxidase-related;
Alkylhydroperoxidase AhpD core;
IMG reference gene:2504769375;
PFAM: Carboxymuconolactone decarboxylase;
TIGRFAM: uncharacterized peroxidase-related enzyme;
alkylhydroperoxidase AhpD family core domain"
/codon_start=1
/transl_table=11
/product="peroxidase-like protein"
/protein_id="YP_004444812.1"
/db_xref="GI:332662024"
/db_xref="InterPro:IPR003779"
/db_xref="GeneID:10584176"
/translation="MAHISLQDGVPGIRSLVLYRPDTGKPLYELAQVLLRADSPLSPG
ERELIAAYVSAQNECVFCSCSHAAAARYLYQDEEQIVDLVLADYQSAPISDKIKALLS
IAGKVQADARTVSEADVALARSCGASDRDIHDTVLIAAAFCMFNRYVDGLGTSTPSDP
DAYRLMGERMGSLGYVPPVQL"
misc_feature complement(24060..>24410)
/locus_tag="Halhy_0025"
/note="Carboxymuconolactone decarboxylase family; Region:
CMD; cl00460"
/db_xref="CDD:213098"
gene complement(24524..25765)
/locus_tag="Halhy_0026"
/db_xref="GeneID:10584177"
CDS complement(24524..25765)
/locus_tag="Halhy_0026"
/note="COGs: COG2814 Arabinose efflux permease;
InterPro IPR011701;
KEGG: nde:NIDE1155 major facilitator superfamily
transporter;
PFAM: Major facilitator superfamily MFS-1;
SPTR: Major facilitator superfamily transporter;
IMG reference gene:2504769376;
PFAM: Major Facilitator Superfamily"
/codon_start=1
/transl_table=11
/product="major facilitator superfamily protein"
/protein_id="YP_004444813.1"
/db_xref="GI:332662025"
/db_xref="InterPro:IPR005829"
/db_xref="InterPro:IPR011701"
/db_xref="InterPro:IPR016196"
/db_xref="InterPro:IPR020846"
/db_xref="GeneID:10584177"
/translation="MQAFSLKNKAFPAFVLCMLSYLLAGTVATLMSTYLPVAIPELLG
KSVDEAQLGQIGAYLNTAFLVGWMLGGLCLGMVGDKIGRIKTLAFSIFVYGFFTLLTV
FVINWETLLFYRFLAGIGVGGVLVFSTVYISEIWPESTRPIALGILAVSFPIGIVLTG
SLNIVFAYWRSAFWLGFIPMFLAVVTLMFIPESEQWHQAKPKQMGLQESIFSAPHKKR
LIAGSLVFGSVLIGLWAIFSWFPTWIQSLLGAGVDGQQERGLSMMLLGLGGITGGFFS
GFLIKKLGSRHTLMFTFAGCFLACCLLFLTNVRFTPIIYFETALLSLFFGISQGALSS
YIPELFPINIRATATGFCFNIGRFFTATAVFFVGSLVSFFGGFGNALLFFSITFLVAL
LVAFNDRAPEPESVPSSSCLK"
misc_feature complement(<25193..25726)
/locus_tag="Halhy_0026"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature complement(order(25298..25300,25316..25321,25328..25333,
25367..25369,25376..25381,25388..25393,25400..25405,
25541..25546,25550..25555,25565..25567,25574..25579,
25586..25588,25658..25663,25667..25675,25682..25684))
/locus_tag="Halhy_0026"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
gene complement(25892..28654)
/locus_tag="Halhy_0027"
/db_xref="GeneID:10584178"
CDS complement(25892..28654)
/locus_tag="Halhy_0027"
/note="COGs: COG1629 Outer membrane receptor protein
mostly Fe transport;
InterPro IPR012910:IPR000531;
KEGG: cpi:Cpin_3725 TonB-dependent receptor;
PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent
receptor, plug;
SPTR: TonB-dependent receptor;
manually curated;
IMG reference gene:2504769377;
PFAM: TonB dependent receptor; TonB-dependent Receptor
Plug Domain"
/codon_start=1
/transl_table=11
/product="TonB-dependent receptor"
/protein_id="YP_004444814.1"
/db_xref="GI:332662026"
/db_xref="InterPro:IPR000531"
/db_xref="InterPro:IPR008969"
/db_xref="InterPro:IPR012910"
/db_xref="InterPro:IPR014766"
/db_xref="GeneID:10584178"
/translation="MKKIVTLTILLLQAIFAMAQTISGTISDAATQKPLSGVNIGIQG
KNEGTITDAEGKFVLNSSTKPPFTLVVSLLGYASQELSINAATTLNITLNAKAEELDQ
VVVSASRVEERILRSPVSIEKMDAKAIQQSPSANFYDALLNMKSVDLVTSSLTYKQIN
TRGFNTTGNSRFLQLVDGVDNQSAGLGFAMGNLFGPHDLDVHSVELIPGAASALYGPI
AFNGMLQTRTKNPFDFQGLSVQSKVGVNHLNDGTDFGAKPFYDLALRYAKAFNDRFAF
KLNAAYLTGTDWYANDYTDIDPNTPVASRGPNNPGRNALNIYGDEVAQTIQGIGRVSR
TGYEEKDLAQYGVYSLKLNGALHYRLSNGMELTYQANYNQGIAQYTGSSRFVINGFNL
VQHRVELKGNNFYVRAYSNKENSQDSYNSRSLGQLINRSWVKDLNGNQVTPDKADATW
FQRYTAAFNGNVNGVSAQNHLSARSFADEGRLLPGSEAFDAASERLITTQGLSGAGIY
SHCGLKHVEGLYDFSPYIKVLNVQIGGNLRRYTLDTQGTLFDDKDKNLSNDEYGAFVQ
VSKDMLNEKLKLTVSGRYDKNENFVGRFTPRASVVFSPSEQHNFRASYQTGFRNPTIG
DQYIKLNVGPIIILGGAPINSQGLNAYENSFTAASVGAFANAFGAQVAQGVPFPTAVA
NNKDKLVKSNVPYIQPEQVQSFEIGYKGFFSQKILFDVNYYLSQYQDFLINTVVIRPD
SEVLLEDGKVNTAAATDILGGKTQAFQLYTNAADQVSIQGISAGVSFILPKNYRLHTN
ATWTEFNLQDANPSNIPAFNTPSWKTNVMFSNPRLSDQLGFSVAWHWQSAFDWYGTFT
SLTPGRIDAYSLFDAQISYKVPKLKTMVKLGAANLTNNYVVQAYGSPAVGGLYYLSLN
FDDLLR"
misc_feature complement(28340..28594)
/locus_tag="Halhy_0027"
/note="Cna protein B-type domain; Region: Cna_B_2;
pfam13715"
/db_xref="CDD:205890"
misc_feature complement(25937..28357)
/locus_tag="Halhy_0027"
/note="TonB-dependent heme/hemoglobin receptor family
protein; Region: TonB-hemin; TIGR01785"
/db_xref="CDD:162536"
misc_feature complement(25907..28297)
/locus_tag="Halhy_0027"
/note="TonB dependent/Ligand-Gated channels are created by
a monomeric 22 strand (22,24) anti-parallel beta-barrel.
Ligands apparently bind to the large extracellular loops.
The N-terminal 150-200 residues form a plug from the
periplasmic end of barrel; Region: ligand_gated_channel;
cd01347"
/db_xref="CDD:73259"
misc_feature complement(order(27971..27997,28031..28054,28058..28066,
28112..28135,28163..28180,28211..28240,28268..28297))
/locus_tag="Halhy_0027"
/note="N-terminal plug; other site"
/db_xref="CDD:73259"
misc_feature complement(order(27209..27211,27290..27292))
/locus_tag="Halhy_0027"
/note="ligand-binding site [chemical binding]; other site"
/db_xref="CDD:73259"
gene complement(28767..29336)
/locus_tag="Halhy_0028"
/db_xref="GeneID:10584179"
CDS complement(28767..29336)
/locus_tag="Halhy_0028"
/note="InterPro IPR003779;
KEGG: aca:ACP_0439 peroxidase;
PFAM: Carboxymuconolactone decarboxylase;
SPTR: Peroxidase;
IMG reference gene:2504769378;
PFAM: Carboxymuconolactone decarboxylase;
TIGRFAM: uncharacterized peroxidase-related enzyme;
alkylhydroperoxidase AhpD family core domain"
/codon_start=1
/transl_table=11
/product="carboxymuconolactone decarboxylase"
/protein_id="YP_004444815.1"
/db_xref="GI:332662027"
/db_xref="InterPro:IPR003779"
/db_xref="GeneID:10584179"
/translation="MPHIPLESHLPGITGLLEYRKDTAAPIRELTQIILRGPSTLSEA
ERELIASLVSSRNECRFCTAAHTAAANILLGESETCAQVIQDFEHAALGEKMKALLAI
AALVQQSGKNVTTTAIERAKNAGASDREIHDTVLIAALFCLYNKYVDGLASVTPNEGA
FYQKLGERITSNGYNRLPGGYDQLKNQEV"
misc_feature complement(28899..>29216)
/locus_tag="Halhy_0028"
/note="Carboxymuconolactone decarboxylase family; Region:
CMD; cl00460"
/db_xref="CDD:213098"
gene complement(29451..30068)
/locus_tag="Halhy_0029"
/db_xref="GeneID:10584180"
CDS complement(29451..30068)
/locus_tag="Halhy_0029"
/note="IMG reference gene:2504769379"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444816.1"
/db_xref="GI:332662028"
/db_xref="GeneID:10584180"
/translation="MRKKREIILQKRCSYKFFSIFASMKRLVAILLLGLMLFNSFGYY
LLFAYERQQARDLAIVNTPEALFDVIKIKVALYTSVSDTDFEFVDEELTVENKTYQIV
KKRIKNDTAELYYFRDFHQEALRKTLNDIVVSQTQDDQPGSNQPIKHLLKSFLKDYIH
DEVFAFSLNSTESTTFEPVVLNATAHVLKASAFLSLHAPPPEPMV"
gene 30084..30488
/locus_tag="Halhy_0030"
/db_xref="GeneID:10584181"
CDS 30084..30488
/locus_tag="Halhy_0030"
/note="IMG reference gene:2504769380"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444817.1"
/db_xref="GI:332662029"
/db_xref="GeneID:10584181"
/translation="MVYQTFSNSRMKAFQHQFLSFSQPPALLVLLVLSAYFNWVCPEE
TPQQTRSDGTVLVDLARPNPDRVYPRAFEFGFRTSAVFAYGSFSFQAYLQIYNCSLTA
RWRQLTRAQDLLPAVLSSRLLLIQLPRSQEFI"
gene 30585..30791
/locus_tag="Halhy_0031"
/db_xref="GeneID:10584182"
CDS 30585..30791
/locus_tag="Halhy_0031"
/note="IMG reference gene:2504769381"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444818.1"
/db_xref="GI:332662030"
/db_xref="GeneID:10584182"
/translation="MKKKLFKALRLLGLALLIVLAVLGVGLTGAAVAFQPKRRPLDPE
VKIELIEKKRDETKDAKKLDIVKR"
gene 30917..32173
/locus_tag="Halhy_0032"
/db_xref="GeneID:10584183"
CDS 30917..32173
/locus_tag="Halhy_0032"
/note="KEGG: sli:Slin_3395 hypothetical protein;
SPTR: uncharacterized protein;
IMG reference gene:2504769382"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444819.1"
/db_xref="GI:332662031"
/db_xref="InterPro:IPR016196"
/db_xref="GeneID:10584183"
/translation="MSISRRDFTLTLWAAVAAFGTYTCMYAFRKGITAATFEGMEYWG
ISYKIWLVNLQVFGYALSKLIGIKVVSEVAVRMRGWYILVLVSIAGLSLVGFAFVPPP
YNMFFFFLNGLPLGMIYGLVLGFLEGRRQTDILVASLTASFIFASGFVKTVGLYVMQN
WGISEFHMPMVTAALFIPAIAVFLTLLMRLPAPDAKDEELRTVRIPMNRDERRRFVQT
FYQGIVLFIIGFVMLTVLRDFRDNFGVEIFKEQGVSNAAVFSQVETPIALGILVLLSM
MARVKDNFRAFTIINGITFLGVLIAVAGTLLFQTKQIGVELWMLSVGAGMYMGYVPVN
GIYFDRILGAFRYPGTVGFIVTLADTWGYMGSFGLQLYKNFGQANISYTTFLIYAVYV
MLGGYGVLVLFSYRYFQKRFIELAKI"
gene complement(32178..32720)
/locus_tag="Halhy_0033"
/db_xref="GeneID:10584184"
CDS complement(32178..32720)
/locus_tag="Halhy_0033"
/note="KEGG: mtt:Ftrac_0129 hypothetical protein;
SPTR: uncharacterized protein;
IMG reference gene:2504769383"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444820.1"
/db_xref="GI:332662032"
/db_xref="GeneID:10584184"
/translation="MTPKVLAQLDQLDADLAQLLDRLMQEPHSVLAHKLSPERWSAYE
VLQHLMLSEAGSLRYLKKKSQGLSQMKKAGYRAALRSWLVTVTLKSPLKFKTPKGTGV
EVFSPVESFALLSGQWQKQREEMRQFLSELPLEIFEKEAYRHPRGGMLTIGGMLQFFK
VHFERHSLQIARTIHEVTPR"
misc_feature complement(32211..32642)
/locus_tag="Halhy_0033"
/note="DinB superfamily; Region: DinB_2; pfam12867"
/db_xref="CDD:205116"
gene complement(32744..33124)
/locus_tag="Halhy_0034"
/db_xref="GeneID:10584185"
CDS complement(32744..33124)
/locus_tag="Halhy_0034"
/note="KEGG: cat:CA2559_12903 hypothetical cytosolic
protein;
SPTR: Hypothetical Cytosolic Protein;
IMG reference gene:2504769384;
PFAM: Protein of unknown function (DUF2847);
TIGRFAM: bacillithiol system protein YtxJ"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444821.1"
/db_xref="GI:332662033"
/db_xref="InterPro:IPR012335"
/db_xref="InterPro:IPR012336"
/db_xref="InterPro:IPR022551"
/db_xref="GeneID:10584185"
/translation="MGYLENFNQAQKSEVFEGWKVLQDEQQLEEILEASKQKPIVIFK
HSTRCGTSERAKYTLMDNWDFAGHELDFYYLDLLKFRTISNRIATDYNITHQSPQVLL
VKDGKVAFHTSHHRISITGLRENL"
misc_feature complement(32753..33025)
/locus_tag="Halhy_0034"
/note="bacillithiol system protein YtxJ; Region:
B_thiol_YtxJ; TIGR04019"
/db_xref="CDD:188534"
gene 33212..34459
/locus_tag="Halhy_0035"
/db_xref="GeneID:10584186"
CDS 33212..34459
/locus_tag="Halhy_0035"
/note="COGs: COG1864 DNA/RNA endonuclease G NUC1;
InterPro IPR020821:IPR001604;
KEGG: cts:Ctha_1807 DNA/RNA non-specific endonuclease;
PFAM: DNA/RNA non-specific endonuclease;
SMART: Extracellular Endonuclease, subunit A;
SPTR: DNA/RNA non-specific endonuclease;
IMG reference gene:2504769385;
PFAM: DNA/RNA non-specific endonuclease"
/codon_start=1
/transl_table=11
/product="DNA/RNA non-specific endonuclease"
/protein_id="YP_004444822.1"
/db_xref="GI:332662034"
/db_xref="InterPro:IPR001604"
/db_xref="InterPro:IPR018524"
/db_xref="InterPro:IPR020821"
/db_xref="GeneID:10584186"
/translation="MRTILFFLLLSPFFLKSQHVNEQLKSLELKLDNLRQQQKEVELE
IEGLKMQKVRTDLMPLLPALEPGEELINHSLMSLVYAEAYEQARWVGHIITPDVVNGG
VGRTNDFRIDPKIKTGSAVEQDYFVKTLQADSAYVYDGFGYDRGHLAPSADFRWSEQA
LSESYYYSNMSPQLAEFNRGIWSDLEGTLRAYLFRNPSTQLVVFTGPVLRPGLPVIPR
AKNKLAIPEQYWKIALDVQNRKAIAFIVPQKTGGYPLASFATSIDEVEKITGIDFFAG
MENGLEETMEKQIDKNAFLTTIAAGDVEPLSAVTLPPAHFNTVQAKLYMGRNQEIKVC
GKVVSARASRKGNILLNLDQQYPNELFTVFINKEQLVNFSYDPITAWKDKYIVVKGKV
NSLGGVPVIYVEKENQLGEFLGK"
misc_feature 33422..34033
/locus_tag="Halhy_0035"
/note="DNA/RNA non-specific endonuclease; prokaryotic and
eukaryotic double- and single-stranded DNA and RNA
endonucleases also present in phosphodiesterases. They
exists as monomers and homodimers; Region: NUC; cd00091"
/db_xref="CDD:28975"
misc_feature 33428..34039
/locus_tag="Halhy_0035"
/note="DNA/RNA non-specific endonuclease; Region:
Endonuclease_NS; smart00892"
/db_xref="CDD:197960"
misc_feature order(33641..33646,33650..33652,33743..33745,33767..33769,
33779..33781)
/locus_tag="Halhy_0035"
/note="active site"
/db_xref="CDD:28975"
misc_feature order(33641..33646,33779..33781)
/locus_tag="Halhy_0035"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:28975"
misc_feature 33743..33745
/locus_tag="Halhy_0035"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:28975"
gene 34479..34643
/locus_tag="Halhy_0036"
/db_xref="GeneID:10584187"
CDS 34479..34643
/locus_tag="Halhy_0036"
/note="IMG reference gene:2504769386"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444823.1"
/db_xref="GI:332662035"
/db_xref="GeneID:10584187"
/translation="MTKKGKKKSNQLTVCHIFVKKNLSFFLKKDLKGYKHSPQNALKF
VLQRLITGLD"
gene complement(34796..35059)
/locus_tag="Halhy_0037"
/db_xref="GeneID:10584188"
CDS complement(34796..35059)
/locus_tag="Halhy_0037"
/note="KEGG: TonB-dependent receptor plug;
SPTR: ferric enterobactin receptor;
IMG reference gene:2504769387"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444824.1"
/db_xref="GI:332662036"
/db_xref="GeneID:10584188"
/translation="MGIGLKPAPNFNITLDYYNIALQASKKSAVALNINNLFNVLPEW
EFKAENPAGETLLKDAAALKLNSNLITFNQRYAITTYDGSHFS"
gene complement(35310..36479)
/locus_tag="Halhy_0038"
/db_xref="GeneID:10584189"
CDS complement(35310..36479)
/locus_tag="Halhy_0038"
/note="COGs: COG2152 glycosylase;
KEGG: rmr:Rmar_2440 glycosidase PH1107-related protein;
SPTR: Glycosidase PH1107-related protein;
IMG reference gene:2504769388"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444825.1"
/db_xref="GI:332662037"
/db_xref="GeneID:10584189"
/translation="MQTTYDTRLFQLASEYEHLMRRSNYYKGLGNGILDRYEHPVLTI
GHLPLTWQYDLNPDANPNLMLRQGVLSIANAGAITVGDKIALVTRLQSFDGQFFFALA
ESSTGVDRFRFRNYPTVLPIMTTVRTNIFNLRLTPHEDGWIYALYNLRQKDQNSAATY
HHAVARTKDLQEWESLPDLSFDAPAQRLCLLHPALINGKYMVYSQQIDQLQTGFSRMP
ITISSFDDWAHSACTEENTVHGIAFPEIETPAYLLGPCPIKTPIGWIHLCAGLRRSSY
GWRHILQVFLTDLNDPSKVLSQPGGHFLELNEKDKSSPALRMLHSNGWAVFQNKVHLY
YTNLDNRVQVVSMPLERLLDYVSNTPQNQTDASTSLKLRMEMIKENQAFMNRFHL"
misc_feature complement(35400..36329)
/locus_tag="Halhy_0038"
/note="Glycosyl hydrolase families: GH43, GH62, GH32,
GH68; Region: GH43_62_32_68; cl14647"
/db_xref="CDD:209879"
misc_feature complement(order(35721..35723,35916..35918,36258..36260))
/locus_tag="Halhy_0038"
/note="active site"
/db_xref="CDD:185718"
gene complement(36617..37486)
/locus_tag="Halhy_0039"
/db_xref="GeneID:10584190"
CDS complement(36617..37486)
/locus_tag="Halhy_0039"
/note="COGs: COG1946 Acyl-CoA thioesterase;
InterPro IPR003703;
KEGG: ppr:PBPRA0973 acyl-CoA thioesterase II;
PFAM: Acyl-CoA thioesterase;
PRIAM: Choloyl-CoA hydrolase;
SPTR: acyl-CoA thioesterase II;
TIGRFAM: Acyl-CoA thioesterase;
IMG reference gene:2504769389;
PFAM: Acyl-CoA thioesterase;
TIGRFAM: acyl-CoA thioesterase II"
/codon_start=1
/transl_table=11
/product="acyl-CoA thioesterase"
/protein_id="YP_004444826.1"
/db_xref="GI:332662038"
/db_xref="InterPro:IPR003703"
/db_xref="GeneID:10584190"
/translation="MKHINELLSLLELEQLEDNLFRGHSKSVGNSTVFGGQVLAQSLY
AAMKTVPADRQVHSLHSYFILPGDLEIPIVFQVERIRDGGSFTTRRVKAIQKGEPIFF
MSASFQLEQEGFDHQITMPNVSPPDWLVSWEDLAQKFGDMLPENIRKFLNLERPIEFR
PVELVNPALPTKSQPFRHIWMKAKGEMPSDPQMHQCVLAYSSDYNLLTTALLPHGAEA
SFGNVKIASLDHAMWFHRPFRMDEWLLYAIDSPSASNARGFTRGNIFTQDGHLVASVV
QEGLIRPKMVDRG"
misc_feature complement(36635..37426)
/locus_tag="Halhy_0039"
/note="Acyl-CoA thioesterase [Lipid metabolism]; Region:
TesB; COG1946"
/db_xref="CDD:32129"
misc_feature complement(37163..37426)
/locus_tag="Halhy_0039"
/note="Thioesterase II (TEII) is thought to regenerate
misprimed nonribosomal peptide synthetases (NRPSs) as well
as modular polyketide synthases (PKSs) by hydrolyzing
acetyl groups bound to the peptidyl carrier protein (PCP)
and acyl carrier protein (ACP)...; Region:
Thioesterase_II_repeat2; cd03445"
/db_xref="CDD:48040"
misc_feature complement(order(37172..37174,37310..37312,37319..37321,
37358..37363,37370..37372))
/locus_tag="Halhy_0039"
/note="active site"
/db_xref="CDD:48040"
misc_feature complement(36644..36958)
/locus_tag="Halhy_0039"
/note="Thioesterase II (TEII) is thought to regenerate
misprimed nonribosomal peptide synthetases (NRPSs) as well
as modular polyketide synthases (PKSs) by hydrolyzing
acetyl groups bound to the peptidyl carrier protein (PCP)
and acyl carrier protein (ACP)...; Region:
Thioesterase_II_repeat1; cd03444"
/db_xref="CDD:48039"
misc_feature complement(order(36656..36658,36797..36799,36806..36808,
36878..36883,36890..36892))
/locus_tag="Halhy_0039"
/note="catalytic triad [active]"
/db_xref="CDD:48039"
misc_feature complement(order(36647..36649,36659..36661,36704..36706,
36731..36733,36782..36784,36788..36805))
/locus_tag="Halhy_0039"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:48039"
gene 37777..38130
/locus_tag="Halhy_0040"
/db_xref="GeneID:10584191"
CDS 37777..38130
/locus_tag="Halhy_0040"
/note="InterPro IPR002372;
PFAM: Pyrrolo-quinoline quinone repeat;
IMG reference gene:2504769390;
PFAM: PQQ enzyme repeat"
/codon_start=1
/transl_table=11
/product="pyrrolo-quinoline quinone repeat-containing
protein"
/protein_id="YP_004444827.1"
/db_xref="GI:332662039"
/db_xref="InterPro:IPR002372"
/db_xref="InterPro:IPR011047"
/db_xref="GeneID:10584191"
/translation="MAFKDYSNAGMWRNAIKRYGIPKDPDSEVSALEGSGVVYVGWDG
RVFALDPENGNKRWCRTLRSYGLAAVESQQIDMAFQAGALYAIWNNRIFKLDPSNGQI
LNIRRADAHLAILFV"
misc_feature 37864..37950
/locus_tag="Halhy_0040"
/note="beta-propeller repeat; Region: PQQ; smart00564"
/db_xref="CDD:128836"
gene 38345..39730
/locus_tag="Halhy_0041"
/db_xref="GeneID:10584192"
CDS 38345..39730
/locus_tag="Halhy_0041"
/note="COGs: COG0006 Xaa-Pro aminopeptidase;
InterPro IPR007865:IPR000994;
KEGG: cpi:Cpin_5101 peptidase M24;
PFAM: Peptidase M24, structural domain; Peptidase M24B,
X-Pro dipeptidase/aminopeptidase P N-terminal;
SPTR: Peptidase M24;
IMG reference gene:2504769391;
PFAM: Aminopeptidase P, N-terminal domain;
Metallopeptidase M24"
/codon_start=1
/transl_table=11
/product="peptidase M24"
/protein_id="YP_004444828.1"
/db_xref="GI:332662040"
/db_xref="InterPro:IPR000994"
/db_xref="InterPro:IPR001131"
/db_xref="InterPro:IPR007865"
/db_xref="GeneID:10584192"
/translation="MFSANTYTHRRAELMHRVGRGLIFLLGNELSPMNYQDNTFPFRQ
DSNFLYYIGLDHPHLAAILDTETGECILFGDELSLDDIIWMGPQPPLTEQALVVGIQE
VQPFDLLLEVLTAARKQNRAIHFLPPYRAENKINLAYWLHLPMLELTSSASIPLIQAI
VAQRSVKTTEEIAEMDKALHTTKAMYLAAMKQTRPGIKEAQLAGIAEGIAVAGGGNLA
YPIIMTVNGQVLHNHHHHNTLKSGQLVLADMGAETAMHYAADITRTWPVDGSFTQQQK
EIYQIVLDAQMAGIAAMRPGLRNLDAHLTAAKVITNGLKSLGLMQGDTDEIVQAGAHA
LFFPHGLGHMIGLDVHDMEDLGEKYTGYHEGLERSTQFGLRSLRMARTLEPGFVMTIE
PGIYFIPELIDRWQQEGRFNQYINYAALAAYRGFSGIRIEDDVLVTQGEPKVLGPGIP
KEIGEIEALRS"
misc_feature 38348..38740
/locus_tag="Halhy_0041"
/note="Aminopeptidase P, N-terminal domain; Region: AMP_N;
smart01011"
/db_xref="CDD:198079"
misc_feature 38363..39721
/locus_tag="Halhy_0041"
/note="proline aminopeptidase P II; Provisional; Region:
PRK10879"
/db_xref="CDD:182804"
misc_feature 38858..39682
/locus_tag="Halhy_0041"
/note="Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro
dipeptidase, X-Pro dipeptidase, proline dipeptidase.,
imidodipeptidase, peptidase D, gamma-peptidase. Catalyses
hydrolysis of Xaa-Pro dipeptides; also acts on
aminoacyl-hydroxyproline analogs. No action on...; Region:
Prolidase; cd01087"
/db_xref="CDD:29972"
misc_feature order(39035..39037,39086..39088,39122..39124,39371..39373,
39518..39520,39638..39640)
/locus_tag="Halhy_0041"
/note="active site"
/db_xref="CDD:29972"
gene complement(39849..40076)
/locus_tag="Halhy_0042"
/db_xref="GeneID:10584193"
CDS complement(39849..40076)
/locus_tag="Halhy_0042"
/note="IMG reference gene:2504769392"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444829.1"
/db_xref="GI:332662041"
/db_xref="GeneID:10584193"
/translation="MVTNKLKRRLLRARVVLNQAIRQILEINRIRKQLPFFQNREAKE
KEIEQDLKLLNKIAQQQAVLIRKYEEELETS"
gene complement(40340..41206)
/locus_tag="Halhy_0043"
/db_xref="GeneID:10584194"
CDS complement(40340..41206)
/locus_tag="Halhy_0043"
/note="COGs: COG1082 Sugar phosphate isomerase/epimerase;
InterPro IPR012307;
KEGG: sli:Slin_1892 xylose isomerase domain protein TIM
barrel;
PFAM: Xylose isomerase, TIM barrel domain;
SPTR: Xylose isomerase domain protein TIM barrel;
IMG reference gene:2504769393;
PFAM: Xylose isomerase-like TIM barrel"
/codon_start=1
/transl_table=11
/product="xylose isomerase domain-containing protein"
/protein_id="YP_004444830.1"
/db_xref="GI:332662042"
/db_xref="InterPro:IPR012307"
/db_xref="InterPro:IPR013022"
/db_xref="GeneID:10584194"
/translation="MDRRTFNQLALSGSMAALLPDFLLGNKRIMSVQLYSVRDDMQKD
LVGTLKAVRKMGYRLVEGAGYNDGKFYGKTPSEFKMILSDLGLSMPSGHFGFGSANYN
PQTRMINDAYKKAIDSAAEIGHEYVIAPYMIDSDRKGGALKQYIEGLNIAGEYAKKAG
VKFGYHNHAFEFEKENGRVIYDMILQDTDPNLVLIQMDLYWTEKGKANTIELLKKNAG
RVHLVHVKDMAKTEKQETVEVGDGSINFNEIFKYTPAAGVKYYVVELEHYVTTPMAGI
AKAYKGLKKLKF"
misc_feature complement(40475..41062)
/locus_tag="Halhy_0043"
/note="Xylose isomerase-like TIM barrel; Region:
AP_endonuc_2; pfam01261"
/db_xref="CDD:201692"
gene 41419..42906
/locus_tag="Halhy_0044"
/db_xref="GeneID:10584195"
CDS 41419..42906
/locus_tag="Halhy_0044"
/note="COGs: COG0154 Asp-tRNAAsn/Glu-tRNAGln
amidotransferase A subunit and related amidase;
InterPro IPR000120;
KEGG: sli:Slin_3918 amidase;
PFAM: Amidase;
SPTR: Amidase;
IMG reference gene:2504769394;
PFAM: Amidase"
/codon_start=1
/transl_table=11
/product="amidase"
/protein_id="YP_004444831.1"
/db_xref="GI:332662043"
/db_xref="InterPro:IPR000120"
/db_xref="InterPro:IPR020556"
/db_xref="GeneID:10584195"
/translation="MLSYEEYRQYDATGLAELVRKKEASAAELLQTAIQRAESVNPQI
NAIIHPLYESAKATVAAESLSGPFAGVPFLVKDLGLEMKDTPLRVGCKGYTGYTSSVD
SYAIQKIKAAGLVIMGKTNTPEFGLTPYTEPELFGPTLNPWNLAHSPGGSSGGSGAAV
AAGIVPMATASDGGGSIRIPASCCGLFGLKPTRGRISLGPIYGEMWSGAVVESCVSRS
VRDTAAYLDALAGSLSGDPYQLSNPSAAYLAELGQHPGSLRIAFSTVHPLGLPVDQAC
KDAVAKMAKQLSDLGHRVEEALPLPYFKEDLLERFLVVVSGESAAELQQLSKHLQRRA
TTADVETNTYALALLGRTFNAGDFAQAKKGWNEIAQRVAQFHQQYDLLLTPTLASRPI
KIGALQNSAAEQTLLKFINSLNLGFMVKASIGQLADKAFGYIPWTPFANMTGQPSMNI
PTLWTEENLPVGTMFTALQGREDLLLRLAAQLEQVMPWGDKIPDL"
misc_feature 41449..42870
/locus_tag="Halhy_0044"
/note="amidase; Provisional; Region: PRK06529"
/db_xref="CDD:180608"
misc_feature 41500..42846
/locus_tag="Halhy_0044"
/note="Amidase; Region: Amidase; pfam01425"
/db_xref="CDD:201788"
gene 43125..45842
/locus_tag="Halhy_0045"
/db_xref="GeneID:10584196"
CDS 43125..45842
/locus_tag="Halhy_0045"
/note="COGs: COG1640 4-alpha-glucanotransferase;
InterPro IPR002044:IPR003385;
KEGG: ppn:Palpr_0895 4-alpha-glucanotransferase;
PFAM: Glycoside hydrolase, family 77; Glycoside hydrolase,
carbohydrate-binding;
PRIAM: 4-alpha-glucanotransferase;
SPTR: 4-alpha-glucanotransferase;
IMG reference gene:2504769395;
PFAM: 4-alpha-glucanotransferase; Starch binding domain"
/codon_start=1
/transl_table=11
/product="4-alpha-glucanotransferase"
/protein_id="YP_004444832.1"
/db_xref="GI:332662044"
/db_xref="InterPro:IPR002044"
/db_xref="InterPro:IPR003385"
/db_xref="InterPro:IPR013781"
/db_xref="InterPro:IPR013783"
/db_xref="InterPro:IPR013784"
/db_xref="InterPro:IPR017853"
/db_xref="GeneID:10584196"
/translation="MYETMTITFQIHYQTNWGQQMAIVGNLPELGSGNEQQAQTMQYI
GGGYWRVSIPLKKAPSTLEYQYLLKDNASLSLLTAEWGNRRKLRISRLAGDHLFLKDS
WRAVDHPENAFYTAAFSKVIFKPQAQYKGNSITPDPLRLGIRFQLRAVQVPAGLQLAI
LGSLPELGAWDYGRPVLLSNADFPLWTGEISVGFRQGFEYKYGLYDPTVQRIIELETG
PNRKLDGAPLDALVNSTIVNDEYYANPAGNWKGAGVAVPVFSLRTAESMGVGEFNDLK
KMIDWAQKAGLRMVQILPVNDTSANHTWTDSYPYAAITVFGLHPQFLHLDVLEGINTK
KVATERKKLNLHPAVDYEAVNKAKLSLAREAFNKTQKTFLSSPDFLSFFAESKHWLEP
YAVFCYLRDKFKSVEFAENWGAYAQYTPALLEELASPTATDYADVAFHYYLQYHLDKQ
LREASDYARSKGLILKGDLPIGIYRHSVDAWVAPHLYNMDGQAGAPPDPFSDNGQNWG
FPTYNWAEMAKDGYLWWRQRMGQLSRYFDAYRIDHILGFFRIWQIPLDQVEGTLGFFN
PALPIMREELDARGIWFDQERYCKPFITKQLLDERFGEDVDDVRTQFLDEIRFNYFAF
KPQYDTQRKIEQFFQAAENQDKIHLQPGLYKLISNVLLLEIPGSNGRAFHPRIDLNKT
YSFQNLDAVQQAKLQELYIDYFYRRQEDFWRAQAMQKLPALKASTDMLICGEDLGMVP
ACVPGVMRELGILTLEIQRMSKNPATEFLQEEDIPYLSVASPSTHDMAPIRAWWEEED
RALISRFFHNELKFMGQEPYTCEPFLAKAVVEKHLRWPSMWTVFPLQDLLAMDLKLRR
ENPAEERINVPAIMPYYWRYRMHLDLEDLIAAEGYNAMLHDLLHRYDRA"
misc_feature 43134..45785
/locus_tag="Halhy_0045"
/note="4-alpha-glucanotransferase; Region: PLN02950"
/db_xref="CDD:178536"
misc_feature 43143..43391
/locus_tag="Halhy_0045"
/note="The family 20 carbohydrate-binding module (CBM20),
also known as the starch-binding domain, is found in a
large number of starch degrading enzymes including
alpha-amylase, beta-amylase, glucoamylase, and CGTase
(cyclodextrin glucanotransferase). CBM20 is...; Region:
CBM20; cd05467"
/db_xref="CDD:119437"
misc_feature order(43167..43184,43251..43253,43263..43265,43269..43271)
/locus_tag="Halhy_0045"
/note="starch-binding site 2 [chemical binding]; other
site"
/db_xref="CDD:119437"
misc_feature order(43221..43223,43317..43319,43365..43367,43374..43376)
/locus_tag="Halhy_0045"
/note="starch-binding site 1 [chemical binding]; other
site"
/db_xref="CDD:119437"
misc_feature 43551..43793
/locus_tag="Halhy_0045"
/note="Starch binding domain; Region: CBM_2; smart01065"
/db_xref="CDD:198133"
misc_feature order(43578..43595,43662..43664,43674..43676,43680..43682)
/locus_tag="Halhy_0045"
/note="starch-binding site 2 [chemical binding]; other
site"
/db_xref="CDD:119437"
misc_feature order(43632..43634,43725..43727,43767..43772,43782..43784)
/locus_tag="Halhy_0045"
/note="starch-binding site 1 [chemical binding]; other
site"
/db_xref="CDD:119437"
misc_feature 43830..45821
/locus_tag="Halhy_0045"
/note="4-alpha-glucanotransferase; Region: Glyco_hydro_77;
cl00711"
/db_xref="CDD:207176"
gene complement(46233..47216)
/locus_tag="Halhy_0046"
/db_xref="GeneID:10584197"
CDS complement(46233..47216)
/locus_tag="Halhy_0046"
/note="KEGG: mca:MCA0752 hypothetical protein;
SPTR: uncharacterized protein;
IMG reference gene:2504769396"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444833.1"
/db_xref="GI:332662045"
/db_xref="InterPro:IPR006029"
/db_xref="InterPro:IPR006202"
/db_xref="GeneID:10584197"
/translation="MPKRLLHQALIAFFLFLLPFGAAQAADKKPKPQKVYTGIYLMNV
YDLDINGYSYYADFYLWFRWKGKFDPTNIEFVNSIEKWGVTQTMFHDSTKVLPDGYSY
NGMRFEGRFYHSFELSDFPMDRHPLDIRIENVEFPKDSLVYVPDTSKNLLREGFNIPG
WKIKKAEIVTHDNTYKTNFGEPTGPPTFSNFTFKLTIGRPLSYFLLKLLLPLLVMLMA
SLLGLFIHPDYIDARISLPIGGLLSCVFLQQSYSTALPDVGYMVLMDRIYLVAYVLIA
IIMMRIIRGSNLLTDREQRENIQKIWASDRRRGYQLMFFIALAILTLVLIR"
gene 47294..47725
/locus_tag="Halhy_0047"
/db_xref="GeneID:10584198"
CDS 47294..47725
/locus_tag="Halhy_0047"
/note="IMG reference gene:2504769397"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444834.1"
/db_xref="GI:332662046"
/db_xref="GeneID:10584198"
/translation="MSLFLGLTLFCGLFSSLNHYVDQAQESKLLLMQYRYIDGNNNAW
NISKKWIEYKPISKVLSSSGNYSGGEPFQAKITTRQYRAIRSLLQNAMSNTAIHLPNR
LMGSGTIIEFTEEDDQTATCYLPMNSPEKAAIEDWLNQLKN"
gene 47725..48153
/locus_tag="Halhy_0048"
/db_xref="GeneID:10584199"
CDS 47725..48153
/locus_tag="Halhy_0048"
/note="IMG reference gene:2504769398"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444835.1"
/db_xref="GI:332662047"
/db_xref="GeneID:10584199"
/translation="MEELILPKQGVPSPALAAQIQEWINALPSEGLWNWVSRVCKEEQ
MLPLHSTSIYIWALRPDGQVLCMDHEAFSHPIDREIDPLKIYAVLQQGTRTYPELSML
IPPSPPGIRQCESCAGLGWVKLPEAAYADTCIRCDGFGWY"
gene 48170..48580
/locus_tag="Halhy_0049"
/db_xref="GeneID:10584200"
CDS 48170..48580
/locus_tag="Halhy_0049"
/note="InterPro IPR000182;
KEGG: vsa:VSAL_I1419 acetyltransferase;
PFAM: GCN5-related N-acetyltransferase;
SPTR: GCN5-related N-acetyltransferase;
IMG reference gene:2504769399;
PFAM: Acetyltransferase (GNAT) family"
/codon_start=1
/transl_table=11
/product="N-acetyltransferase GCN5"
/protein_id="YP_004444836.1"
/db_xref="GI:332662048"
/db_xref="InterPro:IPR000182"
/db_xref="InterPro:IPR016181"
/db_xref="GeneID:10584200"
/translation="MLTYQIENNLSVAEFQAVLLASTLGERRPIDQPERLQKMLEHAN
LIVTARADGKLVGISRALTDFAFCTYLSDLAVDEEYQHQGIGTELIRQTKLASPEAKL
ILLSAPKATGYYPKIGMTRHEHCYFLDREGDLKP"
misc_feature 48206..48523
/locus_tag="Halhy_0049"
/note="putative acetyltransferase; Provisional; Region:
PRK03624"
/db_xref="CDD:179611"
misc_feature 48305..>48445
/locus_tag="Halhy_0049"
/note="N-Acyltransferase superfamily: Various enzymes that
characteristically catalyze the transfer of an acyl group
to a substrate; Region: NAT_SF; cd04301"
/db_xref="CDD:173926"
misc_feature order(48389..48397,48425..48430)
/locus_tag="Halhy_0049"
/note="Coenzyme A binding pocket [chemical binding]; other
site"
/db_xref="CDD:173926"
gene complement(48622..49317)
/locus_tag="Halhy_0050"
/db_xref="GeneID:10584201"
CDS complement(48622..49317)
/locus_tag="Halhy_0050"
/note="IMG reference gene:2504769400"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444837.1"
/db_xref="GI:332662049"
/db_xref="GeneID:10584201"
/translation="MFYSHTYDFLAKLLLIALMVAAFFILQIDHWQQFMMTHWGLREG
QVLFFIIVTITAFFVLPLFVFVYLPFLAPAAAWCYLRFSLKTPVSWALAKKTESLFRP
TLKRLQWFPMKGLKETPQEKREEVLLLFFNEVQSNPDLYGNKSWIDEYLRQNLSKNGY
RAFHITLIPIALWVLYGTFDQSGIPGWLSQLQANYLFAGNHYPMLSFVFAMVFFTFLL
AGPFLLFSRMVRR"
gene complement(49379..49570)
/locus_tag="Halhy_0051"
/db_xref="GeneID:10584202"
CDS complement(49379..49570)
/locus_tag="Halhy_0051"
/note="IMG reference gene:2504769401"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444838.1"
/db_xref="GI:332662050"
/db_xref="GeneID:10584202"
/translation="MKRPCISVFVSHLKEIKTNFPNLPSFLIVEDASKAYLMAALRFK
VSLFFTLPIKNLELRQSIP"
gene complement(49760..50278)
/locus_tag="Halhy_0052"
/db_xref="GeneID:10584203"
CDS complement(49760..50278)
/locus_tag="Halhy_0052"
/note="COGs: COG1670 Acetyltransferase including
N-acetylase of ribosomal protein;
InterPro IPR000182;
KEGG: bbe:BBR47_22110 hypothetical protein;
PFAM: GCN5-related N-acetyltransferase;
SPTR: uncharacterized protein;
IMG reference gene:2504769402;
PFAM: Acetyltransferase (GNAT) family"
/codon_start=1
/transl_table=11
/product="N-acetyltransferase GCN5"
/protein_id="YP_004444839.1"
/db_xref="GI:332662051"
/db_xref="InterPro:IPR000182"
/db_xref="InterPro:IPR016181"
/db_xref="GeneID:10584203"
/translation="MTEILQTDRLILRTLTLDDATFIVELVNSPGWIKYIGYRNINTL
EDARNYLNNGPLKSYVVYGFGLWAIVLKDEGIPIGMCGLIKRDGLEDADLGYAVLPAY
EGQGYITEATRSALHYIFDTLKIKKVLAITNVDNAGSIRVLEKIGFQFLRYMTMPGED
KAVRLFEVVEMD"
misc_feature complement(49832..50221)
/locus_tag="Halhy_0052"
/note="Acetyltransferase (GNAT) domain; Region:
Acetyltransf_3; pfam13302"
/db_xref="CDD:205482"
misc_feature complement(49832..50068)
/locus_tag="Halhy_0052"
/note="Acetyltransferase (GNAT) family; Region:
Acetyltransf_1; pfam00583"
/db_xref="CDD:201324"
gene complement(50342..51055)
/locus_tag="Halhy_0053"
/db_xref="GeneID:10584204"
CDS complement(50342..51055)
/locus_tag="Halhy_0053"
/note="COGs: COG3279 Response regulator of the LytR/AlgR
family;
InterPro IPR001789:IPR007492;
KEGG: cat:CA2559_04910 two-component system response
regulator;
PFAM: LytTr DNA-binding region; Signal transduction
response regulator, receiver region;
SMART: Signal transduction response regulator, receiver
region;
SPTR: Two-component system response regulator;
IMG reference gene:2504769403;
PFAM: Response regulator receiver domain; LytTr
DNA-binding domain"
/codon_start=1
/transl_table=11
/product="LytTR family two component transcriptional
regulator"
/protein_id="YP_004444840.1"
/db_xref="GI:332662052"
/db_xref="InterPro:IPR001789"
/db_xref="InterPro:IPR007492"
/db_xref="InterPro:IPR011006"
/db_xref="GeneID:10584204"
/translation="MAASYRCLILEDEPPAARVLLRYLQEYPEWTCLGVHHSPQSAIA
ALESHHPDLLFLDIHLPDISGLNVLRQLSQPPLVVFTTAYPQYAVEGFELAALDYLLK
PISPERFQKAMERAQERLEQERILENTGQDSGFLSFRADRKVHRLPFQRIIYLQALDD
YVKIISTEGTFLPKITLSQLEKELPQQLFLRIHRSYIVNLKKVQFFDHQELGIGDKKL
PIGKSSRDQVLARLKAEVI"
misc_feature complement(50360..51040)
/locus_tag="Halhy_0053"
/note="Response regulator of the LytR/AlgR family
[Transcription / Signal transduction mechanisms]; Region:
LytT; COG3279"
/db_xref="CDD:33090"
misc_feature complement(50708..51034)
/locus_tag="Halhy_0053"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature complement(order(50747..50752,50759..50761,50813..50815,
50861..50863,50885..50887,51020..51025))
/locus_tag="Halhy_0053"
/note="active site"
/db_xref="CDD:29071"
misc_feature complement(50885..50887)
/locus_tag="Halhy_0053"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature complement(order(50861..50869,50873..50878))
/locus_tag="Halhy_0053"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature complement(50744..50752)
/locus_tag="Halhy_0053"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
misc_feature complement(50363..50632)
/locus_tag="Halhy_0053"
/note="LytTr DNA-binding domain; Region: LytTR;
smart00850"
/db_xref="CDD:197918"
gene complement(51055..51633)
/locus_tag="Halhy_0054"
/db_xref="GeneID:10584205"
CDS complement(51055..51633)
/locus_tag="Halhy_0054"
/note="COGs: COG0127 Xanthosine triphosphate
pyrophosphatase;
HAMAP: Nucleoside-triphosphatase rdgB;
InterPro IPR002637;
KEGG: bvu:BVU_1146 deoxyribonucleoside-triphosphatase;
PFAM: Ham1-like protein;
PRIAM: Nucleoside-triphosphatase;
SPTR: Nucleoside-triphosphatase;
TIGRFAM: Ham1-like protein;
IMG reference gene:2504769404;
PFAM: Ham1 family;
TIGRFAM: non-canonical purine NTP pyrophosphatase,
rdgB/HAM1 family"
/codon_start=1
/transl_table=11
/product="nucleoside-triphosphatase rdgB"
/protein_id="YP_004444841.1"
/db_xref="GI:332662053"
/db_xref="InterPro:IPR002637"
/db_xref="InterPro:IPR020922"
/db_xref="GeneID:10584205"
/translation="MKTLIFASSNPNKIKEVREMLDGLFEVKGLLDIGCTKDIPETAD
TIEGNALLKARYVVENYGLNCFSEDTGLEVFALKGAPGVHSARYSGEGRDPQANIDLL
QQNLAPHADRSARFKTVIALILDGKEHLFEGLVYGQIRKEQHGSGGFGYDPVFVPDGY
ALSFAEMDKTEKNRISHRGRAVQKLLDFLKEG"
misc_feature complement(51070..51624)
/locus_tag="Halhy_0054"
/note="NTPase/HAM1. This family consists of the HAM1
protein and pyrophosphate-releasing xanthosine/ inosine
triphosphatase. HAM1 protects the cell against mutagenesis
by the base analog 6-N-hydroxylaminopurine (HAP) in E.
Coli and S. cerevisiae. A...; Region: HAM1; cd00515"
/db_xref="CDD:29953"
misc_feature complement(order(51100..51105,51178..51183,51187..51189,
51286..51288,51376..51381,51418..51426,51586..51588,
51595..51600,51604..51606))
/locus_tag="Halhy_0054"
/note="active site"
/db_xref="CDD:29953"
misc_feature complement(order(51373..51375,51382..51384,51391..51393,
51400..51405,51505..51513))
/locus_tag="Halhy_0054"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29953"
gene complement(51797..52663)
/locus_tag="Halhy_0055"
/db_xref="GeneID:10584206"
CDS complement(51797..52663)
/locus_tag="Halhy_0055"
/note="COGs: COG3631 Ketosteroid isomerase-related
protein;
InterPro IPR009959;
KEGG: rsl:RPSI07_2290 hypothethical protein;
PFAM: Protein of unknown function DUF1486;
SPTR: uncharacterized protein;
IMG reference gene:2504769405;
PFAM: SnoaL-like polyketide cyclase"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444842.1"
/db_xref="GI:332662054"
/db_xref="InterPro:IPR009959"
/db_xref="GeneID:10584206"
/translation="MKNVSIFCLALFLLISFVPFVSAQDNIARDKANIQKAYDALNRR
DWATFESLCTPNFTDYNVGPGPVVGVKAAIELYKQFQGGFPDFNIKIHEIAAVGNGRY
LLRVTITGTNNGTFMMLPPTGRPIKFDDSDVVELNAEGKCFSHTITNAGEPLRQIGYG
SMINPNTQVVIAVYEKFGKGDVPGILAMCNDDVKFDIQDRMFDAKARMFKGKAGVGQF
FQELGSKFQYSKFQPTRFVADGEDVFVLVEVEYKYISTGKIYASTYTHHFKVQNGKVA
FFRGLDDFQTMK"
misc_feature complement(52241..52564)
/locus_tag="Halhy_0055"
/note="Nuclear transport factor 2 (NTF2-like) superfamily.
This family includes members of the NTF2 family,
Delta-5-3-ketosteroid isomerases, Scytalone Dehydratases,
and the beta subunit of Ring hydroxylating dioxygenases.
This family is a classic example of...; Region: NTF2_like;
cl09109"
/db_xref="CDD:211454"
misc_feature complement(51836..52156)
/locus_tag="Halhy_0055"
/note="SnoaL-like domain; Region: SnoaL_2; pfam12680"
/db_xref="CDD:205015"
gene complement(52815..53270)
/locus_tag="Halhy_0056"
/db_xref="GeneID:10584207"
CDS complement(52815..53270)
/locus_tag="Halhy_0056"
/note="InterPro IPR018726;
KEGG: bba:Bd3624 hypothetical protein;
PFAM: Protein of unknown function DUF2266, transmembrane;
SPTR: uncharacterized protein;
IMG reference gene:2504769406;
PFAM: Domain of unknown function (DUF1772)"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444843.1"
/db_xref="GI:332662055"
/db_xref="InterPro:IPR013901"
/db_xref="GeneID:10584207"
/translation="MALTLVRLLNIIIAALLAGVSFGIWMGFNPLSLSPSTYVEQQQN
MLGGLKVLMISLVFIATLITIVSAFLQKKNKPVFIVLLIAAVFFIACILITRFGNKPI
DDVVMTWTADALPDNWTALRDKWWSLHIMRTIAEMIALFLVTWASIRKN"
misc_feature complement(52833..53180)
/locus_tag="Halhy_0056"
/note="Domain of unknown function (DUF1772); Region:
DUF1772; pfam08592"
/db_xref="CDD:192084"
gene complement(53273..53557)
/locus_tag="Halhy_0057"
/db_xref="GeneID:10584208"
CDS complement(53273..53557)
/locus_tag="Halhy_0057"
/note="KEGG: afw:Anae109_1576 hypothetical protein;
SPTR: uncharacterized protein;
IMG reference gene:2504769407"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444844.1"
/db_xref="GI:332662056"
/db_xref="GeneID:10584208"
/translation="MVVLQIEHKVQNFDSWKKAFENDPIDRKKSGVRSYRIYRPGDDP
NYVIIDLEFENLETAQNALSALRNLWTKVEGTVMFNPQIRILDLVETKVY"
gene complement(53741..55192)
/locus_tag="Halhy_0058"
/db_xref="GeneID:10584209"
CDS complement(53741..55192)
/locus_tag="Halhy_0058"
/note="InterPro IPR000326;
KEGG: sus:Acid_5127 phosphoesterase, PA-phosphatase
related;
PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase;
SPTR: PAP2 superfamily protein;
IMG reference gene:2504769408;
PFAM: PAP2 superfamily"
/codon_start=1
/transl_table=11
/product="phosphoesterase PA-phosphatase-like protein"
/protein_id="YP_004444845.1"
/db_xref="GI:332662057"
/db_xref="InterPro:IPR000326"
/db_xref="InterPro:IPR016119"
/db_xref="GeneID:10584209"
/translation="MRLAGIIDIPTLLVYSNVLFIDVPLKGFPEINSIAQNTSFMQRK
SPILVAMLLLAAQLFAQVEPTAGNWKTWFIPSGQTYRLPAPPAYKDEIAQVLSLQQKL
DAADRQQIMHWNAGAPGYHWQHLMGKLWMNDASYNGALANMLLNVAIYDATIVAWDTK
YAHNRPRPFVADKRIKALILNPQSPSYPCEHSVAAGVATTIIAHFYPALADSVQRMAQ
RMMASRIAAGVVFPSDTRAGFELGKKIAEKEIKHTKDFTNKKVWDGKMPTQAGLWKGK
YAVLPLAGLNKTVVLDSSSQFRPGPPPDFAKDMEELKKYKPSFSSIANAFHFASESVW
EDLLEKKIFENNLHLNPPRAARIYAIAAVGIYDGFTACWDAKYTYWGTRPDQYDTTFQ
PVLIHTPPFPGYPSGHAAIGGVMGELYAYFFPAESAFFRQRAKDGAESRFQGGIHFRT
DNEVGLELGRKVGAMIIQKVRADGADNLLMGQN"
misc_feature complement(54455..54979)
/locus_tag="Halhy_0058"
/note="PAP2_like_1 proteins, a sub-family of PAP2,
containing bacterial acid phosphatase, vanadium
chloroperoxidases and vanadium bromoperoxidases; Region:
PAP2_like_1; cd03380"
/db_xref="CDD:48085"
misc_feature complement(54467..>54808)
/locus_tag="Halhy_0058"
/note="Membrane-associated phospholipid phosphatase [Lipid
metabolism]; Region: PgpB; COG0671"
/db_xref="CDD:31015"
misc_feature complement(order(54491..54493,54503..54505,54521..54523,
54620..54628,54692..54694,54713..54715))
/locus_tag="Halhy_0058"
/note="active site"
/db_xref="CDD:48085"
misc_feature complement(53789..54343)
/locus_tag="Halhy_0058"
/note="PAP2, haloperoxidase_like subfamily.
Haloperoxidases catalyze the oxidation of halides such as
bromide or chloride by hydrogen peroxide, which results in
subsequent halogenation of organic substrates, or
halide-assisted disproportionation of hydrogen...; Region:
PAP2_haloperoxidase; cd03398"
/db_xref="CDD:48102"
misc_feature complement(order(53840..53842,53852..53854,53870..53872,
53969..53977,54044..54046,54065..54067))
/locus_tag="Halhy_0058"
/note="active site"
/db_xref="CDD:48102"
gene 55297..56340
/locus_tag="Halhy_0059"
/db_xref="GeneID:10584210"
CDS 55297..56340
/locus_tag="Halhy_0059"
/note="COGs: COG3275 regulator of cell autolysis;
InterPro IPR010559;
KEGG: cpi:Cpin_3789 signal transduction histidine kinase,
LytS;
PFAM: Signal transduction histidine kinase, internal
region;
SPTR: Signal transduction histidine kinase, LytS;
IMG reference gene:2504769409;
PFAM: Histidine kinase"
/codon_start=1
/transl_table=11
/product="signal transduction histidine kinase"
/protein_id="YP_004444846.1"
/db_xref="GI:332662058"
/db_xref="InterPro:IPR010559"
/db_xref="GeneID:10584210"
/translation="MSIGINKERVKLYLYLAGISLLLSALIDFASDPETALKSSVNYT
WLMLYVVVLHFILFEYTLPFIQFKWKRLLVAPILIFVHLMLYAFGTFAWRYIGIQLYV
YSPLKEYASIIEGVRDHFGNTIGSVLFFGISRHIYDYRKLRKTAQQLRIEKQEAELNY
LKSQTNPHFLFNTLNNIYSLARDKSDLAPESILRLSKILRFMLYEAGGAFIAIEQELK
IITDYIALEQLRYDDSLHVNFNYDVEDMKQALPPLLLIPLVENAFKHGVSESRHQPFV
DIHLSVNKRQLTFLVKNSAEVFPEEGRVKENIGLANLRRQLALLFADYQLLVQQDEHV
FTATLKINLASHV"
misc_feature 55765..56013
/locus_tag="Halhy_0059"
/note="Histidine kinase; Region: His_kinase; pfam06580"
/db_xref="CDD:203479"
gene 56333..57025
/locus_tag="Halhy_0060"
/db_xref="GeneID:10584211"
CDS 56333..57025
/locus_tag="Halhy_0060"
/note="COGs: COG3279 Response regulator of the LytR/AlgR
family;
InterPro IPR001789:IPR007492;
KEGG: bth:BT_1319 two-component system response regulator;
PFAM: LytTr DNA-binding region; Signal transduction
response regulator, receiver region;
SMART: Signal transduction response regulator, receiver
region;
SPTR: Two-component system response regulator;
IMG reference gene:2504769410;
PFAM: Response regulator receiver domain; LytTr
DNA-binding domain"
/codon_start=1
/transl_table=11
/product="LytTR family two component transcriptional
regulator"
/protein_id="YP_004444847.1"
/db_xref="GI:332662059"
/db_xref="InterPro:IPR001789"
/db_xref="InterPro:IPR007492"
/db_xref="InterPro:IPR011006"
/db_xref="GeneID:10584211"
/translation="MSKITCIIIEDEPLAVKVLKDYIAEVPFLDLQGTFKDAILATDY
LRHHTVELMFLDIHLPKLKGMAFLKTLSHPPAVIITTAYHQYAVEGFDLNVTDYLLKP
FEFERFLIAVTKVKTTTKAIPQANEPIETKDFVFLNVQKKKVKVLFTEIVYIESQREY
IKIVCNKKEYLSKISTHEIEALLPANRFKRIHRSFIIAVEKIESYTAEVVEVNGVTIP
IGRGYREVIENL"
misc_feature 56342..57004
/locus_tag="Halhy_0060"
/note="Response regulator of the LytR/AlgR family
[Transcription / Signal transduction mechanisms]; Region:
LytT; COG3279"
/db_xref="CDD:33090"
misc_feature 56351..56665
/locus_tag="Halhy_0060"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature order(56360..56365,56498..56500,56522..56524,56573..56575,
56624..56626,56633..56638)
/locus_tag="Halhy_0060"
/note="active site"
/db_xref="CDD:29071"
misc_feature 56498..56500
/locus_tag="Halhy_0060"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature order(56507..56512,56516..56524)
/locus_tag="Halhy_0060"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature 56633..56641
/locus_tag="Halhy_0060"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
misc_feature 56753..57013
/locus_tag="Halhy_0060"
/note="LytTr DNA-binding domain; Region: LytTR;
smart00850"
/db_xref="CDD:197918"
gene complement(57039..57452)
/locus_tag="Halhy_0061"
/db_xref="GeneID:10584212"
CDS complement(57039..57452)
/locus_tag="Halhy_0061"
/note="KEGG: amr:AM1_C0331 hypothetical protein;
SPTR: uncharacterized protein;
IMG reference gene:2504769411"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444848.1"
/db_xref="GI:332662060"
/db_xref="GeneID:10584212"
/translation="MGIWGITNFENDAAVEWVAEFSEKQSIDKIEGLFTDAVEEDEPD
AELGAAVLAAAELLAISQGNEPEEFDGALLEDYEIDLESIHEWIDADLINLALNAVEK
ISQVEDSALRQVWEEEDELDHWLHVVEDLKKRVKG"
misc_feature complement(57078..57449)
/locus_tag="Halhy_0061"
/note="Domain of unknown function (DUF4259); Region:
DUF4259; pfam14078"
/db_xref="CDD:206248"
gene complement(57516..59024)
/locus_tag="Halhy_0062"
/db_xref="GeneID:10584213"
CDS complement(57516..59024)
/locus_tag="Halhy_0062"
/note="COGs: COG0063 sugar kinase;
InterPro IPR004443:IPR000631;
KEGG: dfe:Dfer_5089 carbohydrate kinase, YjeF related
protein;
PFAM: Uncharacterised protein family, carbohydrate
kinase-related; YjeF-related protein, N-terminal;
SPTR: YjeF family protein;
TIGRFAM: Uncharacterised protein family, carbohydrate
kinase-related; YjeF-related protein, N-terminal;
IMG reference gene:2504769412;
PFAM: YjeF-related protein N-terminus; Carbohydrate
kinase;
TIGRFAM: yjeF N-terminal region; yjeF C-terminal region,
hydroxyethylthiazole kinase-related"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444849.1"
/db_xref="GI:332662061"
/db_xref="InterPro:IPR000631"
/db_xref="InterPro:IPR004443"
/db_xref="InterPro:IPR017953"
/db_xref="GeneID:10584213"
/translation="MKILNATQIRELDAYTIARETIASIDLMERAAETFCSWFVEQFP
DQNVPVHIFCGPGNNGGDGLAVARMLHYAFYEVKLYICHLSPNKSADFQKNIEQLPKF
EAISLQDISEGSVLPPLPPQGIIIDALLGTGASRPIEGYWAVFINNLSQYSGIKIAID
LPSGLQADKNTTGTTFCADYTFSFELPKLAFMLPENESRVGEWTFASIGLDKNFIQNA
ETPFHYLTLNDLGGVLKLRMRHAHKGQFGHALLIAGSQGMMGAALLSGRAALRSGTGL
LTIHTPSCGYSILQMGLPEAMVSSDRHQFNFSELPEMSKYTAIGIGCGLGTKDFSIRG
LDELLGAIGQKPLVLDADALNIIAQQNWQNRIPRGAIISPHPKEFTRLFGTAPDDFAG
LELLRASAIKYGLYIIRKGANTAIALPDGQVWFNSSGNPGMATGGSGDVLTGVLTGLL
AQGYTAEQACKLGVFLHGLAGDLAAESLGHEALLASDIVDHLGKAFQLLKKS"
misc_feature complement(57549..59009)
/locus_tag="Halhy_0062"
/note="putative carbohydrate kinase; Provisional; Region:
PRK10565"
/db_xref="CDD:182554"
misc_feature complement(58455..58961)
/locus_tag="Halhy_0062"
/note="YjeF-related protein N-terminus; Region: YjeF_N;
pfam03853"
/db_xref="CDD:202785"
misc_feature complement(57549..58310)
/locus_tag="Halhy_0062"
/note="B.subtilis YXKO protein of unknown function and
related proteins. Based on the conservation of the ATP
binding site, the substrate binding site and the
Mg2+binding site and structural homology this group is a
member of the ribokinase-like superfamily; Region:
YXKO-related; cd01171"
/db_xref="CDD:29355"
misc_feature complement(order(57705..57707,57714..57716,58233..58235))
/locus_tag="Halhy_0062"
/note="putative substrate binding site [chemical binding];
other site"
/db_xref="CDD:29355"
misc_feature complement(order(57621..57623,57699..57701,57708..57713,
57795..57797,57900..57902))
/locus_tag="Halhy_0062"
/note="putative ATP binding site [chemical binding]; other
site"
/db_xref="CDD:29355"
gene complement(59269..60741)
/locus_tag="Halhy_0063"
/db_xref="GeneID:10584214"
CDS complement(59269..60741)
/locus_tag="Halhy_0063"
/note="COGs: COG4784 Zn-dependent protease;
InterPro IPR001915;
KEGG: sli:Slin_4877 peptidase M48 Ste24p;
PFAM: Peptidase M48, Ste24p;
SPTR: Peptidase M48 Ste24p;
IMG reference gene:2504769413;
PFAM: Peptidase M48"
/codon_start=1
/transl_table=11
/product="peptidase M48 Ste24p"
/protein_id="YP_004444850.1"
/db_xref="GI:332662062"
/db_xref="InterPro:IPR001915"
/db_xref="GeneID:10584214"
/translation="MRKPLFQHLLTTLTLALVLLLNSCAVVNPVTGKKQLMVMSEQEE
IALGASANPQVLAEFGIYDDPKLQAFINEKGQQMAKVSHRPTLPFYFKIVDSDVVNAF
ALPGGYVYFTRGIMAHFNNEAEFAGVLGHEIGHVTGRHGALQQRSQIFSSIGLIGVLI
AVPGAAQLIEPLSQGMQLLLLKNGRDHESQSDELGVEYSTKVGYDAKEMAGFFSTIDR
LSGGPEGRVPNFLSTHPNPMDRFKRVGELAEAEQKKTNNFNLAVNRDAYLRRIDGIVY
GPDPQQGYTDNNVFYHPVLKFQFPVPADWQLQNSPQQVVMAPKDGKAAIIFNLAAEKS
LREAANNTITKDSLKLVDSQNLTVNGFPAVAMVAEQVSQTQQGTQTLRILIYVIQYDN
MIYRFYGMAKAADYNTYNLSFQNTFKNFRELTDRSKINVFAERVKIKTVPRSTTLAEA
LRSFGVPEKRLEEHAILNGMQQKETVTAGMLIKVVEKGSN"
misc_feature complement(59287..60663)
/locus_tag="Halhy_0063"
/note="Putative Zn-dependent protease [General function
prediction only]; Region: COG4784"
/db_xref="CDD:34395"
misc_feature complement(60013..60639)
/locus_tag="Halhy_0063"
/note="Peptidase family M48; Region: Peptidase_M48;
pfam01435"
/db_xref="CDD:201797"
gene complement(60914..63346)
/locus_tag="Halhy_0064"
/db_xref="GeneID:10584215"
CDS complement(60914..63346)
/locus_tag="Halhy_0064"
/note="COGs: COG3391 conserved hypothetical protein;
InterPro IPR007312:IPR011964;
KEGG: sli:Slin_6217 40-residue YVTN family beta-propeller
repeat protein;
PFAM: Phosphoesterase;
SPTR: 40-residue YVTN family beta-propeller repeat
protein;
TIGRFAM: YVTN beta-propeller repeat;
IMG reference gene:2504769414;
PFAM: Phosphoesterase; 3-carboxy-cis,cis-muconate
lactonizing enzyme;
TIGRFAM: 40-residue YVTN family beta-propeller repeat"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444851.1"
/db_xref="GI:332662063"
/db_xref="InterPro:IPR007312"
/db_xref="InterPro:IPR011048"
/db_xref="InterPro:IPR015943"
/db_xref="InterPro:IPR017850"
/db_xref="InterPro:IPR019405"
/db_xref="GeneID:10584215"
/translation="MRHKYPLFFGFLVIIALTSACNKTKQASLTLGRYGKVEKLLLPN
GWSLTPLGKQIELGDLPLNLVLSADQTRAAISNNGQSKHSLMWIDVPNQKVLHELDIP
KAWYGLALTKDAKTLYASAGYDNMIKVYSIENDRLKLKDSLVLGNRWPRGAASPAGLA
LSADEQHLYCVTKGDSALYDFNVGNKTLFKKTKLKAPAYTCNLGPDGKKLYITLWGAS
SVGVYDTETAQMETEIAVGSHPNEMVFSKNGALLFVASADDNAVSVIDLTEKRVVETI
VASLYPDAPIGSTSNSIAISEDGKTLAVANADNNCLALFDVSEPRKSKSLGFVPTGWY
PTSVRFSNNNLLVINGKGLTSKANPNGPNPYKARTKETEYIAGLFKGTLSVIPVPTRE
ELPAFTRLVYQNTPYEKNKELVTEGEAGNPIPRKVGEPSPIKYVFYIIKENRTYDQVF
GDMKEGNGDPSLCLFPDTVSPNMHALAREFVLLDNFYVDAEVSADGHNWSTSAYANDY
VEKNWPTSYGGRGGTYDYEGSKSIAWSKGGFLWDKCKEAGLSYRSYGIWADYGQTYMP
NLKGHLCTTFAGYNLAIQDILRFERWKTDFDSLQAINQVPRMNFVRFGNDHTAGARVG
VPSPAAMVADNDLAVGRFVEHLSKSKIWKESAVFVVEDDAQNGPDHVDAHRSPCLVIS
PYTKRKHIEHSMYSTSSVLRTMELILGLTPMSQYDAAAKPMYACFTRTPDYAPYEAKA
NQISLTARNTIDDYWSKLSYQFNLEKEDRAPDMAFTEVIWKAVRGRNAVVPAPRRSAF
VIPIEVEAEDED"
misc_feature complement(62297..63031)
/locus_tag="Halhy_0064"
/note="WD40 domain, found in a number of eukaryotic
proteins that cover a wide variety of functions including
adaptor/regulatory modules in signal transduction,
pre-mRNA processing and cytoskeleton assembly; typically
contains a GH dipeptide 11-24 residues from...; Region:
WD40; cl02567"
/db_xref="CDD:207648"
misc_feature complement(order(62303..62305,62357..62362,62399..62404,
62423..62425,62435..62437,62510..62515,62549..62554,
62570..62572,62588..62590,62636..62638,62675..62680,
62696..62698,62711..62713,62765..62770,62807..62812,
62825..62827,62837..62839,62915..62920,62954..62959,
62975..62977,62987..62989))
/locus_tag="Halhy_0064"
/note="structural tetrad; other site"
/db_xref="CDD:29257"
misc_feature complement(61217..>61924)
/locus_tag="Halhy_0064"
/note="Phosphoesterase family; Region: Phosphoesterase;
cl15450"
/db_xref="CDD:199586"
gene 63575..64855
/locus_tag="Halhy_0065"
/db_xref="GeneID:10584216"
CDS 63575..64855
/locus_tag="Halhy_0065"
/note="IMG reference gene:2504769415"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444852.1"
/db_xref="GI:332662064"
/db_xref="InterPro:IPR011990"
/db_xref="InterPro:IPR013026"
/db_xref="GeneID:10584216"
/translation="MKTEIKELVAEGKLDEALDRLVAYLEGQIEQFSPLYRAARVAQS
EFNQSKEKELQGILSEDQIRLSNNLAINRILEILEQLERRPADAPSTAVSNKWWWYAA
GGAGAVVAIFFIWKGLNPNQNVKPEQPQNPVDSTLVVEKPPFPCPSFDEEAEYSIAIF
NFTTLDPKDSISDKFLVEEIDTIFLRNRFKGDATLVEKINGSVDVALAKSMIKNCRAK
MIIWGRVFENHEIDLNFYAPSINNEQQDELDSLLQFREQGNFQASIKHAALIIASRVL
VMNNANGAVAVAEEAYEKTVKKSTTTASSKTKPKSSESMATMTLANAHASRKDYKKSI
QYYDELLRKNTKDTVARKNLAIVQIKVNDVASATKTIDTLRQYKKKEDPVFLDKAGDA
LQEKGWTRKGAELKRDAKQAIQDQKVVPKILPKE"
misc_feature 64532..>64663
/locus_tag="Halhy_0065"
/note="TPR repeat; Region: TPR_11; pfam13414"
/db_xref="CDD:205592"
gene 64915..66009
/locus_tag="Halhy_0066"
/db_xref="GeneID:10584217"
CDS 64915..66009
/locus_tag="Halhy_0066"
/note="COGs: COG1994 Zn-dependent protease;
InterPro IPR008915:IPR000644;
KEGG: ote:Oter_3626 peptidase M50;
PFAM: Peptidase M50; Cystathionine beta-synthase, core;
SPTR: Peptidase M50;
IMG reference gene:2504769416;
PFAM: CBS domain; Peptidase M50"
/codon_start=1
/transl_table=11
/product="peptidase M50"
/protein_id="YP_004444853.1"
/db_xref="GI:332662065"
/db_xref="InterPro:IPR000644"
/db_xref="InterPro:IPR008915"
/db_xref="InterPro:IPR016483"
/db_xref="GeneID:10584217"
/translation="MKWSLKIARVAGIDVFLHWTFIVLLVGVLVAGVRTLGQEGGSLN
GFWFILLLFLFVLLHEFGHALMGKRFGVKTNHITLLPIGGVAAMEHIPEKPWQEMLIA
LAGPAVNFVLAIGFLIFLGLSGHIPAFSDWWSPVSNDNMVYSLFTTNVMLFSFNLIPA
FPMDGGRVLRALLAMKYGRYKATNIAVRIGQLLAIGLILFGLSGNIWLVFIGVFIYLG
AGAEGNYESTRSALSKYKVQDAIMHHFTPLQSTDTIGMAVRLLLDGQEKEFVVLENQT
VVGTLTRNEMIEGLGHFGKEAALSEVMKKVILNLEPQMPLDDVYDQMTDENVEIAPVF
ENKKLIGVLNRDNIMELLIIDNAQPHLRLS"
misc_feature 64939..65580
/locus_tag="Halhy_0066"
/note="SpoIVFB Site-2 protease (S2P), a zinc
metalloprotease (MEROPS family M50B), regulates
intramembrane proteolysis (RIP), and is involved in the
pro-sigmaK pathway of bacterial spore formation. In this
subgroup, SpoIVFB (sporulation protein, stage IV cell...;
Region: S2P-M50_SpoIVFB_CBS; cd06164"
/db_xref="CDD:100085"
misc_feature order(65101..65103,65380..65382,65404..65406)
/locus_tag="Halhy_0066"
/note="active site"
/db_xref="CDD:100085"
misc_feature 65380..65391
/locus_tag="Halhy_0066"
/note="putative substrate binding region [chemical
binding]; other site"
/db_xref="CDD:100085"
misc_feature 65644..65967
/locus_tag="Halhy_0066"
/note="The CBS domain, named after human CBS, is a small
domain originally identified in cystathionine
beta-synthase and is subsequently found in a wide range of
different proteins. CBS domains usually occur in tandem
repeats. They associate to form a so-called...; Region:
CBS_pair; cl15354"
/db_xref="CDD:210083"
misc_feature 65665..65961
/locus_tag="Halhy_0066"
/note="FOG: CBS domain [General function prediction only];
Region: COG0517"
/db_xref="CDD:30863"
gene complement(66098..67084)
/locus_tag="Halhy_0067"
/db_xref="GeneID:10584218"
CDS complement(66098..67084)
/locus_tag="Halhy_0067"
/note="COGs: COG0022 Pyruvate/2-oxoglutarate dehydrogenase
complex dehydrogenase (E1) component eukaryotic type beta
subunit;
InterPro IPR005475:IPR005476;
KEGG: chu:CHU_2680 pyruvate dehydrogenase E1 component;
PFAM: Transketolase-like, pyrimidine-binding domain;
Transketolase, C-terminal;
PRIAM: Pyruvate dehydrogenase (acetyl-transferring);
SPTR: Pyruvate dehydrogenase E1 component;
IMG reference gene:2504769417;
PFAM: Transketolase, C-terminal domain; Transketolase,
pyrimidine binding domain"
/codon_start=1
/transl_table=11
/product="pyruvate dehydrogenase"
/protein_id="YP_004444854.1"
/db_xref="GI:332662066"
/db_xref="InterPro:IPR005475"
/db_xref="InterPro:IPR005476"
/db_xref="InterPro:IPR009014"
/db_xref="InterPro:IPR015941"
/db_xref="GeneID:10584218"
/translation="MSRELTLRDALREALIEEMRRDDTVFLMGEEVAQYDGAYKVSKG
LLDEFGARRVIDTPIAELGFAGIGVGAAMNGLRPVIEFMTWNFAILAFDQIVNNAAKT
LSQSAGQFNCPIVFRGPSGAAGQLAQQHSQTFESWMANVPGLKVISCIDPADAKGLLK
AAIRDNNPVCMMESEIMYGHKGPVPEGEYIVPIGKAAVRREGKDVTLVSYNKMTLVAL
DAAVELAKEGISAEVIDLRTIRPLDVETIINSVKKTNRCIIVDEAWPFASVSSEVAYT
VQRLAFDYLDAPVVRVSSADTSLPYASTLVDEFMPNPSKVIKAVKEVMYVKG"
misc_feature complement(66101..67078)
/locus_tag="Halhy_0067"
/note="pyruvate dehydrogenase subunit beta; Validated;
Region: PRK09212"
/db_xref="CDD:169719"
misc_feature complement(66560..67060)
/locus_tag="Halhy_0067"
/note="Pyrimidine (PYR) binding domain of the beta
subunits of the E1 components of human pyruvate
dehydrogenase complex (E1- PDHc) and related proteins;
Region: TPP_PYR_E1-PDHc-beta_like; cd07036"
/db_xref="CDD:132919"
misc_feature complement(order(66584..66589,66650..66655,66698..66700,
66707..66709,66773..66778,66803..66808,66815..66817,
66872..66880,66884..66889,66896..66913,66917..66919,
66926..66928,66992..66994,67010..67012,67016..67018))
/locus_tag="Halhy_0067"
/note="alpha subunit interface [polypeptide binding];
other site"
/db_xref="CDD:132919"
misc_feature complement(order(66815..66817,66824..66826,66902..66904,
66908..66910,66995..66997))
/locus_tag="Halhy_0067"
/note="TPP binding site [chemical binding]; other site"
/db_xref="CDD:132919"
misc_feature complement(order(66659..66661,66665..66670,66674..66676,
66698..66703,66707..66709,66773..66775,66782..66784,
66794..66796,66809..66811,66815..66820,66902..66913,
66917..66919,66992..66994))
/locus_tag="Halhy_0067"
/note="heterodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:132919"
misc_feature complement(66134..66505)
/locus_tag="Halhy_0067"
/note="Transketolase, C-terminal domain; Region:
Transketolase_C; pfam02780"
/db_xref="CDD:202391"
gene 67254..67412
/locus_tag="Halhy_0068"
/db_xref="GeneID:10584219"
CDS 67254..67412
/locus_tag="Halhy_0068"
/note="IMG reference gene:2504769418"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444855.1"
/db_xref="GI:332662067"
/db_xref="GeneID:10584219"
/translation="MKSQIKKSQHTLLACAVLVLCFSCNRGYGCPTNFSFTDLITEAI
KTVFSLFF"
gene 67432..68115
/locus_tag="Halhy_0069"
/db_xref="GeneID:10584220"
CDS 67432..68115
/locus_tag="Halhy_0069"
/note="COGs: COG4121 conserved hypothetical protein;
InterPro IPR008471;
KEGG: coc:Coch_1602 protein of unknown function DUF752;
PFAM: Protein of unknown function DUF752;
SPTR: uncharacterized protein;
IMG reference gene:2504769419;
PFAM: Protein of unknown function (DUF752)"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444856.1"
/db_xref="GI:332662068"
/db_xref="InterPro:IPR008471"
/db_xref="GeneID:10584220"
/translation="MSDGADENEIFVTQDGSHSITAAKFGVSYHSRYGAITESRHVFI
EAGLYPLLVNTPAELSILEIGLGTGLNVLLTYHELDKRPITVYYEALEGFPISPAIAQ
NLNYPSLIEGPRLQAVFQQLHEGEWNKPIALSPHFQVLKRLGQLEEQSFSPVFDLIYF
DAFAPSAQPELWGEEIMQKMYAALKPGGVLVTYCAKGEFKRTLKKVGFTVERLPGPPG
KREMTKAVK"
misc_feature 67474..68112
/locus_tag="Halhy_0069"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cl16911"
/db_xref="CDD:213141"
gene complement(68218..68859)
/locus_tag="Halhy_0070"
/db_xref="GeneID:10584221"
CDS complement(68218..68859)
/locus_tag="Halhy_0070"
/note="InterPro IPR001471;
KEGG: rer:RER_24720 hypothetical protein;
PFAM: Pathogenesis-related transcriptional factor/ERF,
DNA-binding;
SPTR: Endonuclease;
IMG reference gene:2504769420;
PFAM: AP2 domain"
/codon_start=1
/transl_table=11
/product="Pathogenesis-related transcriptional factor and
ERF protein"
/protein_id="YP_004444857.1"
/db_xref="GI:332662069"
/db_xref="InterPro:IPR001471"
/db_xref="InterPro:IPR016177"
/db_xref="GeneID:10584221"
/translation="MLYKVKLKNAEESVLLDDKIYEFLTTDPYLTKVDFINNLRRHSS
GCAVFQKTWKKADGGYKTETIYLHKLIAEKFLVDTKGGDKNLVGAKNGNKLDCRMENL
IYRSRSVASRKRKTSSKVGYTGVYKENNRYRAVISVNRKSVHIGMFATAEEAAMAYNK
MSRKLYGDDGKLNAIKSSRKGEEETPIDLSQVIEVPNTGIKSKRGRKPKNASQ"
misc_feature complement(68341..68496)
/locus_tag="Halhy_0070"
/note="DNA-binding domain found in transcription
regulators in plants such as APETALA2 and EREBP (ethylene
responsive element binding protein). In EREBPs the domain
specifically binds to the 11bp GCC box of the ethylene
response element (ERE), a promotor...; Region: AP2;
cl00033"
/db_xref="CDD:206792"
misc_feature complement(order(68419..68421,68428..68430,68434..68436,
68449..68451,68455..68457,68467..68469,68470..68472,
68476..68478,68482..68484,68488..68493))
/locus_tag="Halhy_0070"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:28902"
gene 69167..70222
/locus_tag="Halhy_0071"
/db_xref="GeneID:10584222"
CDS 69167..70222
/locus_tag="Halhy_0071"
/note="COGs: COG0117 Pyrimidine deaminase;
InterPro IPR002125:IPR002734:IPR004794;
KEGG: cpi:Cpin_2221 riboflavin biosynthesis protein RibD;
PFAM: CMP/dCMP deaminase, zinc-binding; Bacterial
bifunctional deaminase-reductase, C-terminal;
PRIAM: Diaminohydroxyphosphoribosylaminopyrimidine
deaminase., 5-amino-6-(5-phosphoribosylamino)uracil
reductase;
SPTR: Riboflavin biosynthesis protein RibD;
TIGRFAM: Riboflavin biosynthesis protein RibD;
IMG reference gene:2504769421;
PFAM: RibD C-terminal domain; Cytidine and deoxycytidylate
deaminase zinc-binding region;
TIGRFAM: riboflavin-specific deaminase C-terminal domain;
riboflavin biosynthesis protein RibD"
/codon_start=1
/transl_table=11
/product="riboflavin biosynthesis protein RibD"
/protein_id="YP_004444858.1"
/db_xref="GI:332662070"
/db_xref="InterPro:IPR002125"
/db_xref="InterPro:IPR002734"
/db_xref="InterPro:IPR004794"
/db_xref="InterPro:IPR016192"
/db_xref="InterPro:IPR016193"
/db_xref="GeneID:10584222"
/translation="MVKDINRYITRCFDLARMGAGSVSPNPMVGAVLVYDNKIIGEGY
HQKYGGAHAEVNALASVSLSNRPLIPESTLYVSLEPCCIFGKTPPCTNLIIQEKIPRV
VISCLDLTPEVKGRGVELLRAHGIEVTTGVLEKEGQALAATRNVSVSQQRPYVILKMA
ITSNGYFAPLDRSQFWITQTLTKRLVHRWRMESDAILVGTTTALMDDPQLDNRLYYGK
SPLRIVLDRRLQLPNSLKVFSDGQPTLIITEREKSINSASHLHYLSMNFGETFWPDLL
AILWREYKLGVILVEGGQKVLSSLIDTGLWDEARVLIGQKSLTVGIPSPTLPGSPEKN
LKLGFDELKIYQHVQRS"
misc_feature 69197..70174
/locus_tag="Halhy_0071"
/note="riboflavin biosynthesis protein RibD; Region:
eubact_ribD; TIGR00326"
/db_xref="CDD:211570"
misc_feature 69197..69541
/locus_tag="Halhy_0071"
/note="Riboflavin-specific deaminase. Riboflavin
biosynthesis protein RibD
(Diaminohydroxyphosphoribosylaminopyrimidine deaminase)
catalyzes the deamination of
2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone
5'-phosphate, which is an intermediate step in the...;
Region: Riboflavin_deaminase-reductase; cd01284"
/db_xref="CDD:29827"
misc_feature order(69320..69328,69404..69409,69434..69436)
/locus_tag="Halhy_0071"
/note="catalytic motif [active]"
/db_xref="CDD:29827"
misc_feature order(69320..69322,69326..69328,69407..69409,69434..69436)
/locus_tag="Halhy_0071"
/note="Zn binding site [ion binding]; other site"
/db_xref="CDD:29827"
misc_feature 69614..70213
/locus_tag="Halhy_0071"
/note="Pyrimidine reductase, riboflavin biosynthesis
[Coenzyme metabolism]; Region: RibD; COG1985"
/db_xref="CDD:32168"
gene 70356..70988
/locus_tag="Halhy_0072"
/db_xref="GeneID:10584223"
CDS 70356..70988
/locus_tag="Halhy_0072"
/note="COGs: COG2143 Thioredoxin-related protein;
InterPro IPR004879;
KEGG: rbi:RB2501_11362 SoxW;
SPTR: SoxW, ;
IMG reference gene:2504769422;
PFAM: Protein of unknown function, DUF255"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444859.1"
/db_xref="GI:332662071"
/db_xref="InterPro:IPR004879"
/db_xref="InterPro:IPR012335"
/db_xref="InterPro:IPR012336"
/db_xref="InterPro:IPR017936"
/db_xref="InterPro:IPR017937"
/db_xref="GeneID:10584223"
/translation="MSRLGACLAIFLLIGLNVTESIAQENLLGKKGTTPKSGVTAKGI
TPRTPSRSQATTVNWVTWDEAIELNKKEKKKILLDVFTYWCGWCKKMDAETFTNPYLI
KYLNDNYYLVKFDAESKETLAYKGKEFRYVRTSKGGHHELAEEFLRGHLSFPSLVFLD
ENLEVIQPIPGYRDAEELLMISSYFGSGKYKETPWSIFQKDFKIPEGFKR"
misc_feature 70593..70892
/locus_tag="Halhy_0072"
/note="Thioredoxin-like domain; Region: Thioredoxin_2;
pfam13098"
/db_xref="CDD:205279"
gene complement(71102..71965)
/locus_tag="Halhy_0073"
/db_xref="GeneID:10584224"
CDS complement(71102..71965)
/locus_tag="Halhy_0073"
/note="COGs: COG1705 Muramidase (flagellum-specific);
InterPro IPR013338:IPR002901;
KEGG: phe:Phep_0071 mannosyl-glycoprotein
endo-beta-N-acetylglucosamidase;
PFAM: Mannosyl-glycoprotein
endo-beta-N-acetylglucosamidase;
SMART: Lysozyme subfamily 2;
SPTR: Mannosyl-glycoprotein
endo-beta-N-acetylglucosaminidase;
IMG reference gene:2504769423;
PFAM: Mannosyl-glycoprotein
endo-beta-N-acetylglucosaminidase"
/codon_start=1
/transl_table=11
/product="mannosyl-glycoprotein
endo-beta-N-acetylglucosamidase"
/protein_id="YP_004444860.1"
/db_xref="GI:332662072"
/db_xref="InterPro:IPR002901"
/db_xref="GeneID:10584224"
/translation="MKPTYTRNTPTDFSLVSSVNQLIEWINRNWFNAILLYLAGHLLF
QRDLSLQINMERDGAKKYASTPVSTRTSLGNAPNTQQAVFVPAINISQLVKKSLPKSS
TVPAAEKSKEPTFSVSNLTPALSPDYVERKGGGSSNFAEKQQVLQDYIEKYAPAAIRA
MNNYGIPASITLAQGLLESNAGGSKLARESNNHFGIKCRRKCRGCTCRNYTDDDVYDM
FRVFNSVWESYEEHSILLRSPRYQHLQKFGKDYKSWAYGLKQAGYATDKTYAQKLIRI
IRNLKLDQYDK"
misc_feature complement(71120..71509)
/locus_tag="Halhy_0073"
/note="Mannosyl-glycoprotein
endo-beta-N-acetylglucosaminidase; Region:
Glucosaminidase; pfam01832"
/db_xref="CDD:201998"
gene 72137..72995
/locus_tag="Halhy_0074"
/pseudo
/db_xref="GeneID:10584225"
gene 73041..74027
/locus_tag="Halhy_0075"
/db_xref="GeneID:10584226"
CDS 73041..74027
/locus_tag="Halhy_0075"
/note="COGs: COG0205 6-phosphofructokinase;
HAMAP: 6-phosphofructokinase;
InterPro IPR000023:IPR012828;
KEGG: sli:Slin_4275 6-phosphofructokinase;
PFAM: Phosphofructokinase;
PRIAM: 6-phosphofructokinase;
SPTR: 6-phosphofructokinase;
TIGRFAM: 6-phosphofructokinase;
IMG reference gene:2504769425;
PFAM: Phosphofructokinase;
TIGRFAM: 6-phosphofructokinase"
/codon_start=1
/transl_table=11
/product="6-phosphofructokinase"
/protein_id="YP_004444861.1"
/db_xref="GI:332662073"
/db_xref="InterPro:IPR000023"
/db_xref="InterPro:IPR012003"
/db_xref="InterPro:IPR015912"
/db_xref="InterPro:IPR022953"
/db_xref="GeneID:10584226"
/translation="MKTDIKRIAVFTSGGDAPGMNAAIRAVVRTASFHDLHVYGISRG
YEGMIDGDFKRLERKDVANIIHRGGTVLKTARSKRFMTPEGRKTAYESLKAFDIDACI
AIGGNGTFTGANIFAQEHPIPIIGLPGTIDNDLFGTDYTIGFDTAVNTAIDAVDKIRD
TADSHDRVFFVEVMGRHAGYIALHTGIASGAESVVTPEIDTTIEDVVGVLQRSAKRKK
LFSLIIVAEGSRLGNANEIAAKVNERLPGVFDIRVAVIGHLQRGGAPSHLDRMLASRM
GHAAVEGLVEGKADVMAGIVNDEIVYTPFYDAIFTEKTINNQLIKMAGILAM"
misc_feature 73053..74024
/locus_tag="Halhy_0075"
/note="6-phosphofructokinase; Provisional; Region:
PRK03202"
/db_xref="CDD:179553"
misc_feature order(73083..73085,73173..73175,73266..73268,73359..73367,
73371..73376,73428..73430,73434..73436,73440..73442,
73560..73568,73719..73721,73812..73814,73821..73823)
/locus_tag="Halhy_0075"
/note="active site"
/db_xref="CDD:29437"
misc_feature order(73083..73085,73173..73175,73266..73268,73359..73367,
73371..73376)
/locus_tag="Halhy_0075"
/note="ADP/pyrophosphate binding site [chemical binding];
other site"
/db_xref="CDD:29437"
misc_feature order(73113..73115,73125..73127,73212..73214,73227..73229,
73236..73238,73458..73460,73494..73496,73506..73508,
73515..73517,73599..73604,73608..73610,73692..73694,
73848..73853,73863..73865,73884..73886,73929..73931,
74013..74015)
/locus_tag="Halhy_0075"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29437"
misc_feature order(73113..73115,73125..73127,73212..73217,73224..73229,
73515..73517,73608..73610,73614..73616,73686..73688,
73692..73700)
/locus_tag="Halhy_0075"
/note="allosteric effector site; other site"
/db_xref="CDD:29437"
misc_feature order(73428..73430,73434..73436,73440..73442,73539..73541,
73560..73568,73719..73721,73794..73796,73812..73814,
73821..73823)
/locus_tag="Halhy_0075"
/note="fructose-1,6-bisphosphate binding site; other site"
/db_xref="CDD:29437"
gene complement(74101..75015)
/locus_tag="Halhy_0076"
/db_xref="GeneID:10584227"
CDS complement(74101..75015)
/locus_tag="Halhy_0076"
/note="KEGG: cat:CA2559_12198 hypothetical protein;
SPTR: uncharacterized protein;
IMG reference gene:2504769426"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444862.1"
/db_xref="GI:332662074"
/db_xref="GeneID:10584227"
/translation="MKGSPYLYSLKTQTLRYRTFQLFNFSSFQLLQTAAVGLLLGRAW
QHIFWDAPYRELLWDEYWMKDIVAQILGLSWSEYVSNPLYDERIQIFTQGIGWFYVIS
ALAAVGIHWFPRLARGILNVSGCALFLLALIAWKEYSWQIGQLLEYSLQWATPLLLAA
SSKGSIPEKWIRYATRTAISATFIGHGLYAIGYYPVPGNFIEMTMRSLGIAEDAAKMF
LFSIGILDILAALGVIWPGRFKTAIFAYLILWGLLTSLARVWSYFSIDFFENWWQMWI
HELLIRFPHFLLPWFLWRKELESLGLKS"
gene 75161..75802
/locus_tag="Halhy_0077"
/db_xref="GeneID:10584228"
CDS 75161..75802
/locus_tag="Halhy_0077"
/note="IMG reference gene:2504769427"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444863.1"
/db_xref="GI:332662075"
/db_xref="GeneID:10584228"
/translation="MKKIFLIAVLFLLMQSCITSLFPLYTDASLVAKNELIATWKGKD
SFYWKFYKVDDSKLYSLRCRTGRFTAEYSAGLVKIGDNYFMDLKMLGTPLSDDEKKRI
EADEAAKKKAGKDETSDGSELGLLAMNVACHNFYKLGFKGEKIYVYPFNEDYLKELFN
QRKIRIKHEKVDEYTTLLTASTKELQDFFQKYGNDPKLFQDDPEILTKYINTK"
gene 75811..76848
/locus_tag="Halhy_0078"
/db_xref="GeneID:10584229"
CDS 75811..76848
/locus_tag="Halhy_0078"
/note="COGs: COG3275 regulator of cell autolysis;
InterPro IPR010559;
KEGG: dfe:Dfer_5361 signal transduction histidine kinase,
LytS;
PFAM: Signal transduction histidine kinase, internal
region;
SPTR: two-component system sensor but no kinase domain;
IMG reference gene:2504769428;
PFAM: Histidine kinase"
/codon_start=1
/transl_table=11
/product="signal transduction histidine kinase"
/protein_id="YP_004444864.1"
/db_xref="GI:332662076"
/db_xref="InterPro:IPR010559"
/db_xref="GeneID:10584229"
/translation="MLLAIVQFRFLQHLLFWAVAGFIIYRITAYSASPSQTDIYYTFL
FLLPASWVVYWNISLIDRLLPKHLYWRFFLSTLLLLGSGVLGYYLMMEYLVDYIFPGY
YFISYYQPGEILLFLSAFWALSTLLNLSKGWFREQEQKQKIQHLEKQKTQAELDALKA
QLDPHFLFNNLNSLYSLALEENPKTPEAILKLSENLRYVLYEGIGPEVALQKEIQHLS
NYFQLQQWRFGEEMEITLDIDVEKNEESIAPLLLLPLVENSFKHVGRNRTGQYAVRGK
IRLRESKMIFSLQNTIGEKPMLLNTPMSGGIGLVNLQKRLEILYPNRYYFNTLNTDNE
FIAKLELQLKP"
misc_feature 76270..76518
/locus_tag="Halhy_0078"
/note="Histidine kinase; Region: His_kinase; pfam06580"
/db_xref="CDD:203479"
gene complement(76889..78586)
/locus_tag="Halhy_0079"
/db_xref="GeneID:10584230"
CDS complement(76889..78586)
/locus_tag="Halhy_0079"
/note="KEGG: chu:CHU_3120 hypothetical protein;
SPTR: uncharacterized protein;
IMG reference gene:2504769429"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444865.1"
/db_xref="GI:332662077"
/db_xref="GeneID:10584230"
/translation="MGNNYNIKHNVPEPSSEDIAKFMDFDALLEAHRKIESSQEGGVI
RQFTSPREGQIGPRMRRWMVMGAGLAAAAAVALLLIVRSLNDLPTPAQSLAVADAYFA
KQPYVNPPLTKVVPAGRPIKVDVAAGATLDLDEGTRLVIPRTAFQTDRGQLIESGEVD
IYYREMHDAVDFFVAGVPMSYDSAGTRHYLQSAGMVEIIALQNGQPVGMAPGKTIRIE
LQSSISAQADGSWPSFKVYHLDATARSWVFHGKSSMLFEEEPQVLITPGMSLEQKINA
EKEAILAADPMPQAPAKPVKPDGKSVSFELDLKDGELPLEPGSEEAVASLQEGAIWQV
LPNSPAFNVNALNQVWKSARLKRLSETAYELTLLDDGEQLRLLVQPVITGKEFENALQ
QYDEALAAYQKELADWEKRTGEKITAVEARYLKTEETNANPAPSLRRVRHVFDINAFG
IWNCDSPAPLSSNSFRIRVIEDQNGNTYPNQTAYLSDQSGQSIYQLHTGRGSTVYFDS
QKEYLLWLLTPEGKIALVKTKAEWAKSNPKKGVKLKVQTINHTIRNEADIRRALNPD"
gene complement(78653..79273)
/locus_tag="Halhy_0080"
/db_xref="GeneID:10584231"
CDS complement(78653..79273)
/locus_tag="Halhy_0080"
/note="COGs: COG1595 DNA-directed RNA polymerase
specialized sigma subunit sigma24 homolog;
InterPro IPR007627:IPR013249:IPR014284;
KEGG: chu:CHU_2649 RNA polymerase, sigma-E factor; heat
shock and oxidative stress;
PFAM: RNA polymerase sigma-70 region 2; RNA polymerase
sigma factor 70, region 4 type 2;
SPTR: RNA polymerase, sigma-E factor; heat shock and
oxidative stress;
TIGRFAM: RNA polymerase sigma-70;
IMG reference gene:2504769430;
PFAM: Sigma-70, region 4; Sigma-70 region 2;
TIGRFAM: RNA polymerase sigma factor, sigma-70 family"
/codon_start=1
/transl_table=11
/product="ECF subfamily RNA polymerase sigma-24 subunit"
/protein_id="YP_004444866.1"
/db_xref="GI:332662078"
/db_xref="InterPro:IPR007627"
/db_xref="InterPro:IPR013249"
/db_xref="InterPro:IPR013324"
/db_xref="InterPro:IPR013325"
/db_xref="GeneID:10584231"
/translation="MFANLQISRTLAKNEWMDRSAKTVSESALHQEWEEIRAAQGNPA
LFRPLYERYYESVFRLIHRRTTDMELSGDLCSQVFLKALQKISTYTFQGVPFSAWLFR
IAVNEVSQHFRQQQSNRVVSVNDLHLHDLIDEIGSDPEEQELLRRKMMGALENLKTDD
MQLIEMRFFEQRSFKEIAEILGMTENNAKVKVHRILERLKRRLSGG"
misc_feature complement(78665..79138)
/locus_tag="Halhy_0080"
/note="RNA polymerase sigma factor, sigma-70 family;
Region: sigma70-ECF; TIGR02937"
/db_xref="CDD:211770"
misc_feature complement(78926..79129)
/locus_tag="Halhy_0080"
/note="Sigma-70 region 2; Region: Sigma70_r2; pfam04542"
/db_xref="CDD:146937"
misc_feature complement(78674..78838)
/locus_tag="Halhy_0080"
/note="Sigma70, region (SR) 4 refers to the most
C-terminal of four conserved domains found in Escherichia
coli (Ec) sigma70, the main housekeeping sigma, and
related sigma-factors (SFs). A SF is a dissociable subunit
of RNA polymerase, it directs bacterial or...; Region:
Sigma70_r4; cd06171"
/db_xref="CDD:100119"
misc_feature complement(order(78686..78688,78692..78697,78701..78709,
78713..78718,78722..78724,78752..78757,78773..78775,
78803..78805))
/locus_tag="Halhy_0080"
/note="DNA binding residues [nucleotide binding]"
/db_xref="CDD:100119"
gene complement(79441..80814)
/locus_tag="Halhy_0081"
/db_xref="GeneID:10584232"
CDS complement(79441..80814)
/locus_tag="Halhy_0081"
/note="KEGG: sli:Slin_1383 hypothetical protein;
SPTR: uncharacterized protein;
IMG reference gene:2504769431"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444867.1"
/db_xref="GI:332662079"
/db_xref="GeneID:10584232"
/translation="MRSLERLSMLILLASLLACQTQRKIEPPMAIYASEPEEKRSVLH
IPIELKISDLEETLNNELQGVLFNDNSFDDGDNMKIKATKLNKIGFKADNTSISFALP
LALSIQYNGGIFGTLDATGDISLDLKTEYSIQPDWSIVTKTEISSYRWLRRPTLQMGS
INVPIGSLVDLVLNKTRKSIGREIDDVVKDYLGLSRVIQDTWDMMFQPLLVSPEYSAW
LQVNPTSIGMTPVGIVNNALSTTIVIEARPLVNIGPRPEDKEAMQLPPLTMYTALAPG
MEMYLNTTIAWEEAEKIAKQYVLGETYSSGKRKVTVQDLKLYGTNESKVVVNTRLTGS
YNGSIYLNGSPEYDLSANKIKIKDLDFTLDTKNVLMKGGAWMLRSTIKNRIQDNMNFL
LKYNLEEMKNMLQAELNNYRLGSGLRMSGNIDRLEIGKLRLGPNGFNIGIEILGNLKV
MVEEKKK"
misc_feature complement(79459..80706)
/locus_tag="Halhy_0081"
/note="Domain of unknown function (DUF4403); Region:
DUF4403; pfam14356"
/db_xref="CDD:206524"
gene complement(81001..83988)
/locus_tag="Halhy_0082"
/db_xref="GeneID:10584233"
CDS complement(81001..83988)
/locus_tag="Halhy_0082"
/note="COGs: COG4886 Leucine-rich repeat (LRR) protein;
InterProIPR003591:IPR003579:IPR000157:IPR001611:IPR
013684:IPR005225;
KEGG: npu:Npun_F6039 Miro domain-containing protein;
PFAM: MIRO-like; Leucine-rich repeat;
SMART: Ras small GTPase, Rab type; Leucine-rich repeat,
typical subtype; Toll-Interleukin receptor;
SPTR: Miro domain protein;
TIGRFAM: Small GTP-binding protein;
IMG reference gene:2504769432;
PFAM: Leucine Rich Repeat; Ras family"
/codon_start=1
/transl_table=11
/product="small GTP-binding protein"
/protein_id="YP_004444868.1"
/db_xref="GI:332662080"
/db_xref="InterPro:IPR000157"
/db_xref="InterPro:IPR001611"
/db_xref="InterPro:IPR001806"
/db_xref="InterPro:IPR013753"
/db_xref="InterPro:IPR020859"
/db_xref="GeneID:10584233"
/translation="MTKLAQELIEREKEERTGYLDLGRCGLRELPDLSDLYWLDTLIV
SNEWYDAEQRKWFESRNKMSPNYLNKVTDNYLPTGLTKIVLNGEWGKNWGISDGDFLK
NLTNLSELYLSSNRIRDWSFLENLTNLSLLNLSDNKIRDGDFLEKLTNLSLLDISYNN
IRDGDFLENLTNLSALYLGSNYINVWFFLEKLTKLSLLDLSRNKIKDAGFLNKVTSLE
ILDLSFNKIKDIGFLEKMTSLKTLDLTFNKIKDIGLLEKLTSLRKIDLAYNQLNNLAP
IKYFFQEKGMKVICRSPYETKYWEINVQGNPLQTPPEDVVQQGNVAILEYFRQLEKTG
AAPLLEAKLILLGDGRAGKTSLANRLLGKAMPKETDRTLGVDIVIGEYGFPVAEGRQF
KLHIWDFAGQDKYKPLHQFFYTEGAVYVLVADSGNRGTDYDDWLQTAQLFGGGSPLLA
VLNEFKDGIGYGTFDPEHWQKRFPGLLKQHFLVNLLSEKNVDILKNAIHLYAQSLPHT
LVEYPKNWAAIRRELEHRRDENFISFGEYLKICRQNELPEKESALILSSVLHKIGVCL
HYQQSDLLRQYVILKNEWATDAVYKILEDRIVAEEKKGFFDWEDLRRIWSDDTYSEMR
PQLLELMQQFKMAYPLPNVSEFVAPPLLSPRPPKGWELPPEASLELYVEYEFLPKALL
TQFIVTRHTDIDQGRTLVWRNGVVLRWPDALAEVVKAKSQGRDAFGIRAQGRNRKGLL
TAILKTLRDLHSSYKGIKVAEIVPCPCSGCRNGKNKQHFFDFDNLKNRLEKGRRVVEC
DKSLEEVELLQLLGDLLVFDNLRVGEPVVMKDTQAPVKTGGENKAPLAFFSHSNSEQD
LKHLEELHKQLIPLVRSGKIRLWDKRKISAGAERDKEINQALGTADIVFLLLSSDFLA
KDDIWDTEMAEVMRRHEAGTARVIPIKLRVCSCEDTPFSKLQGLPRNYTAISAAPDRD
SVWTEVLEEIKQVLSDWKGAQVK"
misc_feature complement(83440..83673)
/locus_tag="Halhy_0082"
/note="Leucine rich repeat; Region: LRR_8; pfam13855"
/db_xref="CDD:206026"
misc_feature complement(83173..>83556)
/locus_tag="Halhy_0082"
/note="Leucine-rich repeats (LRRs), ribonuclease inhibitor
(RI)-like subfamily. LRRs are 20-29 residue sequence
motifs present in many proteins that participate in
protein-protein interactions and have different functions
and cellular locations. LRRs correspond...; Region:
LRR_RI; cl15309"
/db_xref="CDD:199167"
misc_feature complement(order(83194..83196,83254..83256,83260..83262,
83317..83319,83515..83517))
/locus_tag="Halhy_0082"
/note="Substrate binding site [chemical binding]; other
site"
/db_xref="CDD:29015"
misc_feature complement(83218..83346)
/locus_tag="Halhy_0082"
/note="Leucine Rich repeats (2 copies); Region: LRR_4;
pfam12799"
/db_xref="CDD:205079"
misc_feature complement(83155..83280)
/locus_tag="Halhy_0082"
/note="Leucine Rich repeats (2 copies); Region: LRR_4;
pfam12799"
/db_xref="CDD:205079"
misc_feature complement(82495..82971)
/locus_tag="Halhy_0082"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:213113"
misc_feature complement(<82705..82971)
/locus_tag="Halhy_0082"
/note="GTPase SAR1 and related small G proteins [General
function prediction only]; Region: COG1100"
/db_xref="CDD:31297"
misc_feature complement(82927..82950)
/locus_tag="Halhy_0082"
/note="G1 box; other site"
/db_xref="CDD:206648"
misc_feature complement(order(82531..82539,82621..82623,82627..82632,
82786..82788,82924..82944))
/locus_tag="Halhy_0082"
/note="GTP/Mg2+ binding site [chemical binding]; other
site"
/db_xref="CDD:206648"
misc_feature complement(82873..82875)
/locus_tag="Halhy_0082"
/note="G2 box; other site"
/db_xref="CDD:206648"
misc_feature complement(82855..82863)
/locus_tag="Halhy_0082"
/note="Switch I region; other site"
/db_xref="CDD:206648"
misc_feature complement(82786..82797)
/locus_tag="Halhy_0082"
/note="G3 box; other site"
/db_xref="CDD:206648"
misc_feature complement(order(82735..82740,82786..82791))
/locus_tag="Halhy_0082"
/note="Switch II region; other site"
/db_xref="CDD:206648"
misc_feature complement(82621..82632)
/locus_tag="Halhy_0082"
/note="G4 box; other site"
/db_xref="CDD:206648"
misc_feature complement(82531..82539)
/locus_tag="Halhy_0082"
/note="G5 box; other site"
/db_xref="CDD:206648"
misc_feature complement(81112..81450)
/locus_tag="Halhy_0082"
/note="TIR domain; Region: TIR_2; pfam13676"
/db_xref="CDD:205852"
gene complement(84179..86029)
/locus_tag="Halhy_0083"
/db_xref="GeneID:10584234"
CDS complement(84179..86029)
/locus_tag="Halhy_0083"
/note="COGs: COG2272 Carboxylesterase type B;
InterPro IPR002018;
KEGG: cse:Cseg_2440 carboxylesterase;
PFAM: Carboxylesterase, type B;
PRIAM: Carboxylesterase;
SPTR: carboxylesterase;
IMG reference gene:2504769433;
PFAM: Carboxylesterase"
/codon_start=1
/transl_table=11
/product="carboxylesterase"
/protein_id="YP_004444869.1"
/db_xref="GI:332662081"
/db_xref="InterPro:IPR002018"
/db_xref="InterPro:IPR019819"
/db_xref="InterPro:IPR019826"
/db_xref="GeneID:10584234"
/translation="MKQFSTILFLSLWATLFFAQTTVSTTYGPISGSTEEGTLAFKGI
PYAKPPVGNLRWQAPQAPSAWTTAKMATAFAPKCPQKNFESTNPDTAIIEGQEDCLYL
NVWTPALSGKRPVMFFIHGGGNQQGSASETVNGTLLYTGKFLASRKDVVVVTINYRLG
ALGYLAHPAVAAASTSKTSGNYGTMDQVFALEWVKNNIERFGGDPNNVMVFGESAGAV
NTSVLLTVPSAKNLFHRAGIQSGSPIASPYLLGENFGKSFASRMGCATGTLEQQLACL
KALPIDKIIAELESPLSGGKVSLGWGPVVDGLVIPKDPASVILSGQHHKMPVMLGSNA
DEMSASSPLVVTPAQVRTLFDTQVPEAYEAEGLTLYPPGTTNAQARQSYIQALTDAQF
TAPARRLARGLDLFQTEPVWRYLFSHSQAGLGSIYGAAHGLELAFIFQSVEETNYGKG
AFYNNNDKVVAKAMLDYWTNFARTGNPNSSGLTIWPTYDWQKDPYLDIKSPVASAEGL
RTQKSDYWDRARGVSTSTRQPLSLLGVNMKMPTLYQEGARVSLSLEEDLTLQIEVYNL
LGQKISTVFQGNLSAGEHLLALKIPEAARGMLLLRAQAGGRSLGVKIWKE"
misc_feature complement(84482..85966)
/locus_tag="Halhy_0083"
/note="Carboxylesterase family; Region: COesterase;
pfam00135"
/db_xref="CDD:201026"
misc_feature complement(84527..85966)
/locus_tag="Halhy_0083"
/note="Esterases and lipases (includes fungal lipases,
cholinesterases, etc.) These enzymes act on carboxylic
esters (EC: 3.1.1.-). The catalytic apparatus involves
three residues (catalytic triad): a serine, a glutamate or
aspartate and a histidine.These...; Region:
Esterase_lipase; cl12031"
/db_xref="CDD:211462"
misc_feature complement(order(84725..84727,84734..84736,84869..84871,
84956..84961,84971..84973,85376..85378,85385..85393,
85661..85669))
/locus_tag="Halhy_0083"
/note="substrate binding pocket [chemical binding]; other
site"
/db_xref="CDD:29383"
misc_feature complement(order(84737..84739,85022..85024,85388..85390))
/locus_tag="Halhy_0083"
/note="catalytic triad [active]"
/db_xref="CDD:29383"
gene complement(86200..86562)
/locus_tag="Halhy_0084"
/db_xref="GeneID:10584235"
CDS complement(86200..86562)
/locus_tag="Halhy_0084"
/note="IMG reference gene:2504769434"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444870.1"
/db_xref="GI:332662082"
/db_xref="GeneID:10584235"
/translation="MKANRDLSELFRQQAPKPLERPGVNVWRRLQRRLDTYDRWHKNA
QRISMQIVLFFLLLVAIVAPTIIGISIEEQKRADLRNPPVILQVLSPMDTLPETRRFL
ELESGHPGDTIILEWEKE"
gene complement(86559..87158)
/locus_tag="Halhy_0085"
/db_xref="GeneID:10584236"
CDS complement(86559..87158)
/locus_tag="Halhy_0085"
/note="COGs: COG1595 DNA-directed RNA polymerase
specialized sigma subunit sigma24 homolog;
InterPro IPR007627:IPR013249:IPR014284;
KEGG: mtt:Ftrac_1351 RNA polymerase, sigma-24 subunit, ecf
subfamily;
PFAM: RNA polymerase sigma-70 region 2; RNA polymerase
sigma factor 70, region 4 type 2;
SPTR: RNA polymerase sigma-70 factor, ECF subfamily;
TIGRFAM: RNA polymerase sigma-70;
IMG reference gene:2504769435;
PFAM: Sigma-70, region 4; Sigma-70 region 2;
TIGRFAM: RNA polymerase sigma factor, sigma-70 family"
/codon_start=1
/transl_table=11
/product="ECF subfamily RNA polymerase sigma-24 subunit"
/protein_id="YP_004444871.1"
/db_xref="GI:332662083"
/db_xref="InterPro:IPR007627"
/db_xref="InterPro:IPR011991"
/db_xref="InterPro:IPR013249"
/db_xref="InterPro:IPR013324"
/db_xref="InterPro:IPR013325"
/db_xref="GeneID:10584236"
/translation="MSEKDLINACRQRDRRAQQALYDRFAPHMFGVCKRYVKTQEDAE
DVLIEAFFKVLTNIEQYKGEGSFEGWIRRIVVNESLMALRKRVNFSQTLELTDIDVQV
TTSVLQELVAKDILNLIDLLPIGYRTVFNLYVIEGYKHREIAQILGISINTSKSQLIL
SKKRLKSLLEQIRYPGIELFDIEEEEEEVEVPVKITTKP"
misc_feature complement(86700..87098)
/locus_tag="Halhy_0085"
/note="RNA polymerase sigma factor, sigma-70 family;
Region: sigma70-ECF; TIGR02937"
/db_xref="CDD:211770"
misc_feature complement(86901..87098)
/locus_tag="Halhy_0085"
/note="Sigma-70 region 2; Region: Sigma70_r2; pfam04542"
/db_xref="CDD:146937"
misc_feature complement(<86700..86819)
/locus_tag="Halhy_0085"
/note="Sigma70, region (SR) 4 refers to the most
C-terminal of four conserved domains found in Escherichia
coli (Ec) sigma70, the main housekeeping sigma, and
related sigma-factors (SFs). A SF is a dissociable subunit
of RNA polymerase, it directs bacterial or...; Region:
Sigma70_r4; cd06171"
/db_xref="CDD:100119"
misc_feature complement(order(86700..86705,86709..86711,86739..86744,
86760..86762,86790..86792))
/locus_tag="Halhy_0085"
/note="DNA binding residues [nucleotide binding]"
/db_xref="CDD:100119"
gene 87370..88599
/locus_tag="Halhy_0086"
/db_xref="GeneID:10584237"
CDS 87370..88599
/locus_tag="Halhy_0086"
/note="COGs: COG0019 Diaminopimelate decarboxylase;
InterPro IPR000183:IPR002986;
KEGG: coc:Coch_2136 diaminopimelate decarboxylase;
PFAM: Orn/DAP/Arg decarboxylase 2;
PRIAM: Diaminopimelate decarboxylase;
SPTR: Diaminopimelate decarboxylase;
TIGRFAM: Diaminopimelate decarboxylase;
IMG reference gene:2504769436;
PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet
domain; Pyridoxal-dependent decarboxylase, pyridoxal
binding domain;
TIGRFAM: diaminopimelate decarboxylase"
/codon_start=1
/transl_table=11
/product="diaminopimelate decarboxylase"
/protein_id="YP_004444872.1"
/db_xref="GI:332662084"
/db_xref="InterPro:IPR000183"
/db_xref="InterPro:IPR002986"
/db_xref="InterPro:IPR009006"
/db_xref="InterPro:IPR022643"
/db_xref="InterPro:IPR022644"
/db_xref="InterPro:IPR022653"
/db_xref="GeneID:10584237"
/translation="MKFENGHYLLSGGINPLKLVEKYGSPLYVYEAETIERQYQRLKA
AFQVEKLKISYACKALTNISILKFIKQLGSTIDCVSIQEVQMALRAGFAPVDVLYTPS
GVHFSEIEEAVALGVRINLDNIPAIEKFGEIYPHIPICVRINPHIMAGGNLKTSVGHI
DSKFGISYQQMPLVQGILETTGMKLEGLHMHTGSDILNPDAFIAGADVMLNLAKDYPD
LDYIDFGSGFKVPYKPNDLETNIEELGEKLSAKFNTFCQEYGRAITMVFEPGKFLVSE
AGSFLVTVNVVKHGVTTVFAGVDSGLNHLIRPMFYDAYHRISNLSNPEGKTQTYNVVG
YICETDTFATKREIPEIAPGDVLCMHNAGAYCYSMASNYNSRLRPAEVLIYQGKDFLI
RERETIEDLFKHQIDVF"
misc_feature 87379..88587
/locus_tag="Halhy_0086"
/note="diaminopimelate decarboxylase; Region: lysA;
TIGR01048"
/db_xref="CDD:188105"
misc_feature 87436..88521
/locus_tag="Halhy_0086"
/note="Type III Pyridoxal 5-phosphate (PLP)-Dependent
Enzyme Diaminopimelate Decarboxylase; Region:
PLPDE_III_DapDC; cd06828"
/db_xref="CDD:143501"
misc_feature order(87535..87537,87541..87543,87598..87600,87667..87669,
87793..87795,87934..87936,87940..87942,87949..87951,
88045..88050,88171..88182,88288..88290,88300..88302,
88378..88380,88462..88464,88474..88476,88486..88488)
/locus_tag="Halhy_0086"
/note="active site"
/db_xref="CDD:143501"
misc_feature order(87535..87537,87541..87543,87598..87600,87667..87669,
87793..87795,87934..87936,87940..87942,87949..87951,
88045..88050,88171..88182,88378..88380,88462..88464)
/locus_tag="Halhy_0086"
/note="pyridoxal 5'-phosphate (PLP) binding site [chemical
binding]; other site"
/db_xref="CDD:143501"
misc_feature order(87541..87543,87940..87942,87949..87951,88180..88182,
88288..88290,88300..88302,88378..88383,88462..88464,
88474..88476,88486..88488)
/locus_tag="Halhy_0086"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:143501"
misc_feature order(87541..87543,88378..88380)
/locus_tag="Halhy_0086"
/note="catalytic residues [active]"
/db_xref="CDD:143501"
misc_feature order(87556..87561,87604..87609,87613..87618,87673..87681,
87691..87693,87733..87735,87742..87744,87853..87864,
88225..88227,88231..88233,88252..88254,88258..88260,
88369..88386,88387..88389,88471..88479,88483..88494,
88501..88503)
/locus_tag="Halhy_0086"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:143501"
gene 88690..91425
/locus_tag="Halhy_0087"
/db_xref="GeneID:10584238"
CDS 88690..91425
/locus_tag="Halhy_0087"
/note="COGs: COG0525 Valyl-tRNA synthetase;
HAMAP: Valyl-tRNA synthetase;
InterPro IPR002300:IPR013155:IPR019499:IPR002303;
KEGG: phe:Phep_1244 valyl-tRNA synthetase;
PFAM: Aminoacyl-tRNA synthetase, class Ia;
Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I,
anticodon-binding; Valyl-tRNA synthetase, class Ia, tRNA
binding arm;
PRIAM: Valine--tRNA ligase;
SPTR: Valyl-tRNA synthetase;
TIGRFAM: Valyl-tRNA synthetase, class Ia;
IMG reference gene:2504769437;
PFAM: tRNA synthetases class I (I, L, M and V);
Anticodon-binding domain; Valyl tRNA synthetase tRNA
binding arm;
TIGRFAM: valyl-tRNA synthetase"
/codon_start=1
/transl_table=11
/product="valyl-tRNA synthetase"
/protein_id="YP_004444873.1"
/db_xref="GI:332662085"
/db_xref="InterPro:IPR001412"
/db_xref="InterPro:IPR002300"
/db_xref="InterPro:IPR002303"
/db_xref="InterPro:IPR009008"
/db_xref="InterPro:IPR009080"
/db_xref="InterPro:IPR013155"
/db_xref="InterPro:IPR014729"
/db_xref="InterPro:IPR019499"
/db_xref="GeneID:10584238"
/translation="MSLSTRYTPQEIESKWYQHWLERRYFHSEPDDREPFTVVIPPPN
VTGVLHMGHMLNNTIQDILIRKARLDGKNACWIPGTDHASIATEAKVVQQLRAQGIRK
TDIGREAFLQHAFEWKDKYGGIILDQLKRLGASCDWERTRFTMEDSLSEAVIRVFVDL
YGKKRIYRDWRITNWDPEAKTVLSNEEVIYSEENAQLFHLRYALEGDASQGIVIATQR
PETIMADVAVAVHPDDERFQHLIGKNVLIPLIDRAIPIIADTYVDREFGTGALKITPA
HDQNDYEIGQRFKLPVIDILTEDGKLNEKARILIGEDRFVARKKIRKLLEESGHLIKL
EDYRTKIGRSERTSAVVEPRLTLQWFVDMKKFAHSALEAVRSGEVKFYPEHFWNMYNS
WLNEDNVRDWCISRQLWWGQRIPAWYLATERMGEENHIFVADTAEDALAQAREKTGNA
DLSLADLRQEEDVVDTWFSSWLWPISVFDGFKTQEELKYYYPTSILVTGWDIMFFWVA
RMIMSGYEWAPELIPDVVKEKGAMPFRGVYFTGMVRDNLRRKMSKSLGNSPDALALLD
NYGADGVRFGMLSSAAAGNDIIFDAPIGKDGVLNESKLCEQGRNFCNKMWNALRLIKS
WEVTDKAVDGETEQVNQLAATWMEHKLNQTLAQVEVMFTEYRLSEALMTLYKFIWDDF
CAWYLEMIKPAYEAPIDRQTLEQSIALFERMMTLLHPFMPFVTEEIWHQLRERPTGDD
CVISTYLKAAAFDAVFIEKIERAKGLVTGVREIRNNNGLKQKELLKVFAQETPSSREL
LVMEGLLPMVVKMASLEFLQITSAEISNGVAFLVGNEKFYVELEQAIDVEEERKRLQK
ELEYYQGFVKSVQNKLSNEKFVSGAPAEVVNKEKQKLADGEMKMKNLAEELGKLG"
misc_feature 88690..91422
/locus_tag="Halhy_0087"
/note="valyl-tRNA synthetase; Reviewed; Region: valS;
PRK05729"
/db_xref="CDD:180225"
misc_feature 88789..>89253
/locus_tag="Halhy_0087"
/note="nucleotidyl transferase superfamily; Region:
nt_trans; cl00015"
/db_xref="CDD:212170"
misc_feature 88837..88848
/locus_tag="Halhy_0087"
/note="active site"
/db_xref="CDD:173912"
misc_feature 88837..88848
/locus_tag="Halhy_0087"
/note="HIGH motif; other site"
/db_xref="CDD:173912"
misc_feature order(88837..88839,88846..88848)
/locus_tag="Halhy_0087"
/note="nucleotide binding site [chemical binding]; other
site"
/db_xref="CDD:173912"
misc_feature 89335..89667
/locus_tag="Halhy_0087"
/note="Leucyl-tRNA synthetase, Domain 2; Region:
tRNA-synt_1_2; pfam13603"
/db_xref="CDD:205781"
misc_feature <89719..90456
/locus_tag="Halhy_0087"
/note="catalytic core domain of valyl-tRNA synthetases;
Region: ValRS_core; cd00817"
/db_xref="CDD:185677"
misc_feature order(90088..90090,90097..90099,90181..90186,90190..90195,
90205..90207,90307..90318,90340..90342)
/locus_tag="Halhy_0087"
/note="active site"
/db_xref="CDD:185677"
misc_feature 90337..90351
/locus_tag="Halhy_0087"
/note="KMSKS motif; other site"
/db_xref="CDD:185677"
misc_feature 90484..90885
/locus_tag="Halhy_0087"
/note="Anticodon-binding domain of valyl tRNA synthetases;
Region: Anticodon_Ia_Val; cd07962"
/db_xref="CDD:153416"
misc_feature order(90487..90489,90493..90498,90508..90510,90514..90519,
90526..90531,90538..90543,90547..90552,90694..90696,
90703..90705,90724..90726,90748..90753,90760..90762)
/locus_tag="Halhy_0087"
/note="tRNA binding surface [nucleotide binding]; other
site"
/db_xref="CDD:153416"
misc_feature order(90529..90531,90538..90543,90547..90552,90736..90738,
90748..90753,90760..90762)
/locus_tag="Halhy_0087"
/note="anticodon binding site; other site"
/db_xref="CDD:153416"
misc_feature <91273..91422
/locus_tag="Halhy_0087"
/note="Valyl tRNA synthetase tRNA binding arm; Region:
Val_tRNA-synt_C; pfam10458"
/db_xref="CDD:151031"
gene complement(91446..92741)
/locus_tag="Halhy_0088"
/db_xref="GeneID:10584239"
CDS complement(91446..92741)
/locus_tag="Halhy_0088"
/note="COGs: COG0809
S-adenosylmethionine:tRNA-ribosyltransferase-isomerase
(queuine synthetase);
InterPro IPR003699;
KEGG: pdi:BDI_3759 S-adenosylmethionine:tRNA
ribosyltransferase-isomerase;
PFAM: Queuosine biosynthesis protein;
SPTR: S-adenosylmethionine:tRNA
ribosyltransferase-isomerase 1;
IMG reference gene:2504769438;
PFAM: Queuosine biosynthesis protein;
TIGRFAM: S-adenosylmethionine:tRNA
ribosyltransferase-isomerase"
/codon_start=1
/transl_table=11
/product="Queuosine biosynthesis protein"
/protein_id="YP_004444874.1"
/db_xref="GI:332662086"
/db_xref="InterPro:IPR003699"
/db_xref="GeneID:10584239"
/translation="MRVQDIRIEDYQYVLPEGRIAKYPLPLRDASKLLVAIDVASGFQ
EDIYANIHHYIPNGALMLFNNTKVIPARLHMAKPTGGMVEIFCLEPIGELSVEMARHG
ETTWKCFVGGAKKWKEGTVTAVWGTDSYREYLLSAEVIERTDTYFHIKFRWQPSEFTF
AEVLSAIGQIPLPPYLDREAEELDRERYQTIYANLEGSVAAPTAGLHFTEKVFDDLRA
KNIDLAYVTLHVGAGTFKPVSATTIGNHDMHAEYFDVSRYLIQDLYTAYSEKRPVIAV
GTTTLRTLESLFLMGCKLLDASASLSNRASASLSNRASASLSDLSHEDLEIKQWDAYQ
LAHETTDVPRALSALLDWMDQQGLDRMVAKTQLLIAPGYTIRMISGLCTNFHQPGSTL
LLLVAALMGNRWKEMYQYALEHDYRFLSYGDGCYIELKS"
misc_feature complement(<91884..92723)
/locus_tag="Halhy_0088"
/note="Queuosine biosynthesis protein; Region:
Queuosine_synth; cl00523"
/db_xref="CDD:212234"
misc_feature complement(91458..>91652)
/locus_tag="Halhy_0088"
/note="Queuosine biosynthesis protein; Region:
Queuosine_synth; cl00523"
/db_xref="CDD:212234"
gene complement(92823..95447)
/locus_tag="Halhy_0089"
/db_xref="GeneID:10584240"
CDS complement(92823..95447)
/locus_tag="Halhy_0089"
/note="KEGG: fps:FP0087 glycosyl hydrolase;
SPTR: BNR/Asp-box repeat domain protein;
IMG reference gene:2504769439"
/codon_start=1
/transl_table=11
/product="glycosyl hydrolase"
/protein_id="YP_004444875.1"
/db_xref="GI:332662087"
/db_xref="InterPro:IPR015943"
/db_xref="GeneID:10584240"
/translation="MKKHLFRATALLLWFTTCCTFSAYAQPWVDLMEKGDKASFEAAK
NQFKEFWKDKTPEKGKGYKPFLRWQNYWEDRLMPDGSLPKAGTTEEEFKNYQKARGFA
PGEVTSSLTPVGTWSPMGPTSSTGGYAGIGRLNAIAFDPTNSSIIYVGSAGGGVWKTT
NGGTSWTALTDFGPSLGVSSILVDPATPNTIYLSTGDGDGRDSPSVGILKSTDGGATW
STTGLNWVRSDVRYTRKLVKNPSGRILVATSIGIFYTDDAGANWTQANTGVFYDLEQM
PGSAGTFYATAVNGTTAQVFRSTDNGVTWTQVHSLTASNRAELTVSPANTDYVGVVYS
KSSDSGFNGFYSSTNGGTAWALKASTPNLLGWNATGNDAGGQGWYDLTIVTDPTNANV
IYLGGVNTWKSTNGGTSWTINTMWTSSGSVPVVHADKHALEFQNNTTLFQGNDGGIYR
TTNGGTSWTDLTNTMAISQLYRLGVAQTSATLIGGLQDNGTKLRSATGTWTDEIGGDG
MDCAINPSNGNYMYGELYYGDIKRSANGGSTWTTIKPSTTEQGGWITPFALAPSAPAT
IYIGFKNIWKSTTGTSSNVRWTKIGSNSTSGPSIRAIAVAPNNANVVYYSFDADLSAG
AQLRKTTSGSNSWTTLTNPTNVGRVGSIAIDNTNSNNIWVTVSGYNAGQKVFKSTNGG
SSWTNVTGTLPNIPANCVAYSNGSNGGVYLGMDVGVYYRDNTMSDWILFNAQLPNVEI
ADLEIQYSLGKIRAATYGRGVWESDLYGTTPFIAPEIASKLSDKELQNTNFKVYPNPA
QDVLNVEFYAAEGGTSRLYILDLMGRVQTKDQVVEMVQGFNKVNLQINDLPNGIYYLT
NGKGKSMRFVKTSSTAQP"
misc_feature complement(92847..93071)
/locus_tag="Halhy_0089"
/note="Por secretion system C-terminal sorting domain;
Region: Por_Secre_tail; TIGR04183"
/db_xref="CDD:200434"
gene complement(95903..96505)
/locus_tag="Halhy_0090"
/db_xref="GeneID:10584241"
CDS complement(95903..96505)
/locus_tag="Halhy_0090"
/note="SPTR: uncharacterized protein;
IMG reference gene:2504769440"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444876.1"
/db_xref="GI:332662088"
/db_xref="GeneID:10584241"
/translation="MEMKLVQKLLIVGLFCSVLPVLVPAQILRDTFVRTSAEDWRVHP
WKEYKSIEGKFQVLTPGDFDKAVDSVYTDIGKLAYHILIYNNTQKNAENLFYMITFCD
YPPGTIHSDSTELLKDFFDASIDQAIKSVNGELAYQNDITLKGFPGKLWRINYLRGEA
LIKTRAFMVGNRFYTIQTVTVKDMAINAASDRFFDSFIVL"
gene 96632..98077
/locus_tag="Halhy_0091"
/db_xref="GeneID:10584242"
CDS 96632..98077
/locus_tag="Halhy_0091"
/note="COGs: COG1488 Nicotinic acid
phosphoribosyltransferase;
InterPro IPR015977:IPR006405;
KEGG: wch:wcw_0536 nicotinate phosphoribosyltransferase;
PFAM: Nicotinate phosphoribosyltransferase-like;
PRIAM: Nicotinate phosphoribosyltransferase;
SPTR: Nicotinate phosphoribosyltransferase;
TIGRFAM: Nicotinate phosphoribosyltransferase
IMG reference gene:2504769441;
PFAM: Nicotinate phosphoribosyltransferase (NAPRTase)
family;
TIGRFAM: nicotinate phosphoribosyltransferase"
/codon_start=1
/transl_table=11
/product="nicotinate phosphoribosyltransferase"
/protein_id="YP_004444877.1"
/db_xref="GI:332662089"
/db_xref="InterPro:IPR002638"
/db_xref="InterPro:IPR007229"
/db_xref="InterPro:IPR015977"
/db_xref="GeneID:10584242"
/translation="MTNTSHLSTVYREKFALVADLYHLTMAYGFWKNGLQDRPSVFQL
YYRRNPFGNPYAIATGLGLAIDYLQQFRFTVEDIHYLGSLNGADGKPLFDIGFLNYLQ
RLEFKCDVYAIPEGTAVFPNQPLIRVEGPLLQAQIIESALLNLINFSTLIATKAARVV
QAAPGDQILEFGLRRAQGLDGALTASRAAYIGGCHATSNLLAGKYYRIPVRGTHAHSW
VMSYGDELKSYRGFASAMPNNCIFLVDTYDTISGIKNAIEVGKELRTTGHDLIGIRLD
SGDLGALSKIARQMLDEAGFNNTAILASDCLDENSIKKLKNEGAPINIWGVGTELITG
GTQAALGGVYKLAAIQDNDGAWEYRIKKSEDLYKMSNPGIHQVRRYYNAAGIPQADVL
FELGKQEPEQELIEMHNGKASPLPSPAPFEDLLVPIFKTGALVYTVPELHQVRERSIQ
QQLLFKDAEQDFIHGLDRYLYDLKQRFAQKN"
misc_feature 96677..97990
/locus_tag="Halhy_0091"
/note="nicotinate phosphoribosyltransferase; Validated;
Region: PRK09243"
/db_xref="CDD:181722"
misc_feature 96677..97672
/locus_tag="Halhy_0091"
/note="Nicotinate phosphoribosyltransferase (NAPRTase),
subgroup A. Nicotinate phosphoribosyltransferase catalyses
the formation of NAMN and PPi from 5-phosphoribosy
-1-pyrophosphate (PRPP) and nicotinic acid, this is the
first, and also rate limiting, reaction...; Region:
NAPRTase_A; cd01570"
/db_xref="CDD:29617"
misc_feature order(97148..97156,97220..97225,97457..97459,97541..97546,
97607..97609,97613..97618,97625..97627)
/locus_tag="Halhy_0091"
/note="active site"
/db_xref="CDD:29617"
gene 98158..98883
/locus_tag="Halhy_0092"
/db_xref="GeneID:10584243"
CDS 98158..98883
/locus_tag="Halhy_0092"
/note="COGs: COG1051 ADP-ribose pyrophosphatase;
InterPro IPR000086;
KEGG: syp:SYNPCC7002_A2383 NUDIX hydrolase;
PFAM: NUDIX hydrolase domain;
SPTR: Nudix hydrolase;
IMG reference gene:2504769442;
PFAM: NUDIX domain"
/codon_start=1
/transl_table=11
/product="NUDIX hydrolase"
/protein_id="YP_004444878.1"
/db_xref="GI:332662090"
/db_xref="InterPro:IPR000086"
/db_xref="InterPro:IPR015797"
/db_xref="InterPro:IPR020084"
/db_xref="InterPro:IPR020476"
/db_xref="GeneID:10584243"
/translation="MKYCYEYPRPAVTVDCIIFGLDESQVLKVLLIQRGHDPYLGHWA
LPGGFVDLEEDLEFAALRELEEETGVRNVFIEQLFTFGAPHRDPRGRVISVAYYALVN
LTDHPVHPSTDAQSAEWFPITALPQLAFDHDVILETALNRLRAKVRYQPIGFELLPEK
FTLTQLQNLYETILGLPKNDQLNKRNFRTRIQKMDVLKEVGIQEGVSHRPAKLYSFDK
ERYEELQKMKYKELVRRGLDFEI"
misc_feature 98176..98589
/locus_tag="Halhy_0092"
/note="ADP-ribose pyrophosphatase [Nucleotide transport
and metabolism]; Region: COG1051"
/db_xref="CDD:31251"
misc_feature order(98299..98307,98335..98361)
/locus_tag="Halhy_0092"
/note="nudix motif; other site"
/db_xref="CDD:72880"
gene 98967..99464
/locus_tag="Halhy_0093"
/db_xref="GeneID:10584244"
CDS 98967..99464
/locus_tag="Halhy_0093"
/note="COGs: COG2062 Phosphohistidine phosphatase SixA;
InterPro IPR013078;
KEGG: sku:Sulku_1674 phosphohistidine phosphatase, SixA;
PFAM: Phosphoglycerate mutase;
SPTR: phosphohistidine phosphatase, SixA;
IMG reference gene:2504769443;
PFAM: Phosphoglycerate mutase"
/codon_start=1
/transl_table=11
/product="phosphohistidine phosphatase, SixA"
/protein_id="YP_004444879.1"
/db_xref="GI:332662091"
/db_xref="InterPro:IPR013078"
/db_xref="GeneID:10584244"
/translation="MKTVYFVRHAKSSWDNASIKDIDRPLNERGLRDAPEMGLKLKQL
DAKIGLIVSSPAKRAYTTATYFAAALGISPDQVVTEPRLYEAMSEDVLEVVSGLSDDF
DTVAIFGHNPTLTFIANLFTEDFIDNVPTCGVFRVDANVASWDQFGENSGRLTEFHFP
KQFYH"
misc_feature 98973..99380
/locus_tag="Halhy_0093"
/note="Histidine phosphatase domain found in
phosphoglycerate mutases and related proteins, mostly
phosphatases; contains a His residue which is
phosphorylated during the reaction; Region: HP_PGM_like;
cd07067"
/db_xref="CDD:132718"
misc_feature order(98988..98993,99138..99140,99294..99299)
/locus_tag="Halhy_0093"
/note="catalytic core [active]"
/db_xref="CDD:132718"
gene 99464..99775
/locus_tag="Halhy_0094"
/db_xref="GeneID:10584245"
CDS 99464..99775
/locus_tag="Halhy_0094"
/note="IMG reference gene:2504769444"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444880.1"
/db_xref="GI:332662092"
/db_xref="GeneID:10584245"
/translation="MKLLRIALLPIFLGLFACNVGQQKLPIPEKKLIQILTDAHYAEA
ALQDVYGTQKDSLKKVYYEEIFQLYQTSEEELTKAMDILRKDPARLDKVYQEVVKNLN
G"
misc_feature 99542..99769
/locus_tag="Halhy_0094"
/note="Domain of unknown function (DUF4296); Region:
DUF4296; pfam14129"
/db_xref="CDD:206298"
gene 99904..100587
/locus_tag="Halhy_0095"
/db_xref="GeneID:10584246"
CDS 99904..100587
/locus_tag="Halhy_0095"
/note="COGs: COG0745 Response regulators consisting of a
CheY-like receiver domain and a winged-helix DNA-binding
domain;
InterPro IPR001789:IPR001867;
KEGG: zpr:ZPR_0499 two-component system response
regulator;
PFAM: Signal transduction response regulator, receiver
region; Signal transduction response regulator,
C-terminal;
SMART: Signal transduction response regulator, receiver
region;
SPTR: Two-component system response regulator;
IMG reference gene:2504769445;
PFAM: Response regulator receiver domain; Transcriptional
regulatory protein, C terminal"
/codon_start=1
/transl_table=11
/product="winged helix family two component
transcriptional regulator"
/protein_id="YP_004444881.1"
/db_xref="GI:332662093"
/db_xref="InterPro:IPR001789"
/db_xref="InterPro:IPR001867"
/db_xref="InterPro:IPR011006"
/db_xref="InterPro:IPR011991"
/db_xref="InterPro:IPR016032"
/db_xref="GeneID:10584246"
/translation="MDNIKILIVDDEPDILEILQYNLEKEGYQVVTASSGEEALVVAE
KEQPNLIVLDIMMPKIDGVEVCRILRTKPEFDRTAITFLTAREEDYSQIAALDVGGDD
YITKPIRPRVFISRIKALLRRSDRLPQEEGLDVIKIGGLSIDRDRVSVQKGEEVIELA
KKEFELLFLLVSKPGKVFSREEIFNKVWGTDVIVGNRTIDVHIRKLREKIGDDYIKTI
KGIGYKFEF"
misc_feature 99916..100581
/locus_tag="Halhy_0095"
/note="Response regulators consisting of a CheY-like
receiver domain and a winged-helix DNA-binding domain
[Signal transduction mechanisms / Transcription]; Region:
OmpR; COG0745"
/db_xref="CDD:31088"
misc_feature 99922..100266
/locus_tag="Halhy_0095"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature order(99931..99936,100063..100065,100087..100089,
100153..100155,100210..100212,100219..100224)
/locus_tag="Halhy_0095"
/note="active site"
/db_xref="CDD:29071"
misc_feature 100063..100065
/locus_tag="Halhy_0095"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature order(100072..100077,100081..100089)
/locus_tag="Halhy_0095"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature 100219..100227
/locus_tag="Halhy_0095"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
misc_feature 100309..100578
/locus_tag="Halhy_0095"
/note="Effector domain of response regulator. Bacteria and
certain eukaryotes like protozoa and higher plants use
two-component signal transduction systems to detect and
respond to changes in the environment. The system consists
of a sensor histidine kinase and...; Region: trans_reg_C;
cd00383"
/db_xref="CDD:29475"
misc_feature order(100381..100383,100438..100443,100495..100497,
100504..100506,100528..100533,100552..100554,
100567..100569)
/locus_tag="Halhy_0095"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:29475"
gene 100587..101639
/locus_tag="Halhy_0096"
/db_xref="GeneID:10584247"
CDS 100587..101639
/locus_tag="Halhy_0096"
/note="COGs: COG5002 Signal transduction histidine kinase;
InterPro IPR003661:IPR003594;
KEGG: cpi:Cpin_1223 histidine kinase;
PFAM: ATP-binding region, ATPase-like; Signal transduction
histidine kinase, subgroup 1, dimerisation/phosphoacceptor
region;
SMART: ATP-binding region, ATPase-like; Signal
transduction histidine kinase, subgroup 1,
dimerisation/phosphoacceptor region;
SPTR: Histidine kinase;
IMG reference gene:2504769446;
PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like
ATPase; His Kinase A (phosphoacceptor) domain"
/codon_start=1
/transl_table=11
/product="integral membrane sensor signal transduction
histidine kinase"
/protein_id="YP_004444882.1"
/db_xref="GI:332662094"
/db_xref="InterPro:IPR003594"
/db_xref="InterPro:IPR003661"
/db_xref="InterPro:IPR004358"
/db_xref="InterPro:IPR005467"
/db_xref="InterPro:IPR009082"
/db_xref="GeneID:10584247"
/translation="MLKNPTPRQIAIASAALITAVGVLIFLMVRFLRWDAYPWLEYLT
WVLIFFILTYRVVLFFLQNYIYRKIKLIYKTIHQEKINPAEKNKTINADAKIFEEVGE
QVAAWAANQQKEIDQLRSWSEYRRAFLGDISHELKTPIFNIQGYIESLIDSGVEDPVF
SLSFLKKAAKNVDRLQTIIQDLETISKLETGNMLLEITSFDIRELGKEVFEELEIKAA
ERNISLDFKEGANQNFRVKADREKIRQVLINLVHNSIKYGIPNGRIKFAFYDMDKRVL
IEVADNGIGIPKEHLAHVFDRFYRVDKSRSRTQGGSGLGLSIVKHIIEAHAQTINVRS
TPNLGSTFGFTLDKAG"
misc_feature 100653..101633
/locus_tag="Halhy_0096"
/note="Signal transduction histidine kinase [Signal
transduction mechanisms]; Region: BaeS; COG0642"
/db_xref="CDD:30987"
misc_feature 100959..101147
/locus_tag="Halhy_0096"
/note="Histidine Kinase A (dimerization/phosphoacceptor)
domain; Histidine Kinase A dimers are formed through
parallel association of 2 domains creating 4-helix
bundles; usually these domains contain a conserved His
residue and are activated via...; Region: HisKA; cd00082"
/db_xref="CDD:119399"
misc_feature order(100968..100970,100980..100982,100992..100994,
101001..101003,101013..101015,101022..101024,
101076..101078,101088..101090,101097..101099,
101109..101111,101118..101120,101130..101132)
/locus_tag="Halhy_0096"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119399"
misc_feature 100986..100988
/locus_tag="Halhy_0096"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:119399"
misc_feature 101313..101624
/locus_tag="Halhy_0096"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:28956"
misc_feature order(101331..101333,101343..101345,101352..101354,
101421..101423,101427..101429,101433..101435,
101439..101444,101523..101534,101580..101582,
101586..101588,101601..101606,101610..101612)
/locus_tag="Halhy_0096"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28956"
misc_feature 101343..101345
/locus_tag="Halhy_0096"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:28956"
misc_feature order(101433..101435,101439..101441,101523..101525,
101529..101531)
/locus_tag="Halhy_0096"
/note="G-X-G motif; other site"
/db_xref="CDD:28956"
gene 101815..103746
/locus_tag="Halhy_0097"
/db_xref="GeneID:10584248"
CDS 101815..103746
/locus_tag="Halhy_0097"
/note="COGs: COG0488 ATPase components of ABC transporter
with duplicated ATPase domains;
InterPro IPR003593:IPR003439;
KEGG: coc:Coch_0378 ABC transporter related;
PFAM: ABC transporter-like;
SMART: ATPase, AAA+ type, core;
SPTR: ABC transporter, ATP-binding protein;
IMG reference gene:2504769447;
PFAM: ABC transporter"
/codon_start=1
/transl_table=11
/product="ABC transporter"
/protein_id="YP_004444883.1"
/db_xref="GI:332662095"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR017871"
/db_xref="GeneID:10584248"
/translation="MLNITNVYIQYGDRILLNRINLTIGEKDKVGLVGRNGAGKSTLL
KIIAGEMSPHDGKISRPSGASLGFLHQEMDIPKGRSVLDEVMTAFAEAKDLEIRIAEI
HEEMETRTDYESQEYMDLLEEFAHVNDRFHYLGGESAQGEAERVLKGLGFKQTDLSRL
TDEFSGGWQMRVELAKMLLRRPDFLLLDEPTNHLDIESIIWLETFLKDYTGAVILISH
DKEFLDNVTLRTIEVELGNVFDYKAPYTKFVEMRRERREKQRASYENQQKVIAEKERT
ISRFMAKATKTKMAQSMQKQLDKIERIEIDDEDIAAMNIRFPTAPRAGQIVVEAHHLE
KRYGDLLILDKVEFKMDRGDRVAFVGQNGQGKTTLAKIVVNEIPLSGGKLTLGHNVKI
GYYAQNQSETLKSSETLLETMENAAPPEMRSRVRHILGAFMFSGEDADKKVSVLSGGE
RARLALACLLLNPFNLLVLDEPTNHLDIISKDVLKAALMEYDGSLIVVSHDRDFLSGL
TNRTVEFRDRHLYNHIGDVNAFLEKRQLDNMRQVELSTKTTTPAVVASSNGTSNGTPA
RELSFEERKRLQRNVSNAEKKIERLEEDLVKFQKLMSDPEFYSKPDSTKTMQAYEAKK
KELEGAMEEWEMATMELEG"
misc_feature 101815..103416
/locus_tag="Halhy_0097"
/note="ATPase components of ABC transporters with
duplicated ATPase domains [General function prediction
only]; Region: Uup; COG0488"
/db_xref="CDD:30834"
misc_feature 101818..>102027
/locus_tag="Halhy_0097"
/note="ABCF_EF-3 Elongation factor 3 (EF-3) is a
cytosolic protein required by fungal ribosomes for in
vitro protein synthesis and for in vivo growth. EF-3
stimulates the binding of the EF-1: GTP: aa-tRNA ternary
complex to the ribosomal A site by facilitated...; Region:
ABCF_EF-3; cd03221"
/db_xref="CDD:72980"
misc_feature <102298..102516
/locus_tag="Halhy_0097"
/note="ABCF_EF-3 Elongation factor 3 (EF-3) is a
cytosolic protein required by fungal ribosomes for in
vitro protein synthesis and for in vivo growth. EF-3
stimulates the binding of the EF-1: GTP: aa-tRNA ternary
complex to the ribosomal A site by facilitated...; Region:
ABCF_EF-3; cd03221"
/db_xref="CDD:72980"
misc_feature 102505..>102705
/locus_tag="Halhy_0097"
/note="ABC transporter; Region: ABC_tran_2; pfam12848"
/db_xref="CDD:205105"
misc_feature 102796..103371
/locus_tag="Halhy_0097"
/note="ABCF_EF-3 Elongation factor 3 (EF-3) is a
cytosolic protein required by fungal ribosomes for in
vitro protein synthesis and for in vivo growth. EF-3
stimulates the binding of the EF-1: GTP: aa-tRNA ternary
complex to the ribosomal A site by facilitated...; Region:
ABCF_EF-3; cd03221"
/db_xref="CDD:72980"
gene complement(103908..107738)
/locus_tag="Halhy_0098"
/db_xref="GeneID:10584249"
CDS complement(103908..107738)
/locus_tag="Halhy_0098"
/note="InterPro IPR003088:IPR013428:IPR013427;
KEGG: dfe:Dfer_0279 membrane-bound dehydrogenase domain
protein;
PFAM: Cytochrome c, class I;
SPTR: Membrane-bound dehydrogenase domain protein;
TIGRFAM: membrane-bound dehydrogenase; haem-binding
region;
IMG reference gene:2504769448;
PFAM: Cytochrome c;
TIGRFAM: membrane-bound dehydrogenase domain;
heme-binding domain, Pirellula/Verrucomicrobium type"
/codon_start=1
/transl_table=11
/product="membrane-bound dehydrogenase domain-containing
protein"
/protein_id="YP_004444884.1"
/db_xref="GI:332662096"
/db_xref="InterPro:IPR003088"
/db_xref="InterPro:IPR009056"
/db_xref="InterPro:IPR011041"
/db_xref="InterPro:IPR011042"
/db_xref="InterPro:IPR011989"
/db_xref="InterPro:IPR016024"
/db_xref="GeneID:10584249"
/translation="MTSKLYAFSLALLACAWFTLAPKALKPKGTPANATEFRLVQDEA
LGTIAVFTAKGKTPVLTQNAKADFRPFLHPIIAPDGNGVLTEYSPGHHKHQTGIYWGF
TRVNGRDYFHHPEGDYWRRVSATVIKAKGPEVKWETVYDLLDEKGNTVLTETQTWTMR
EQDGKYLLDLEWAGEAQTDVTIGKYDYGGLFVRMPWKAGIQGEVINAARQRNEKAEGQ
RAGWVDVGMQIEGRNDWGHIAILDHPENKGFPQTWRVDGQLGIGPARARTADWQIPKG
KVEVIKYQLVLYTGTLDDVKMNSIWSAYSGQDMMYSLWGIAQAEGRDAKFLSPEEAVK
AMTLKEGFKVNTWASEPMMTQPMAFCWDDRGRLWVAENRDYESRGYGFSKAGNSRILI
LEDTDHDGVADSKKVFLEGIAFPAAIAVGFDGLFLGAPPNLLFVPDRNHDDVADMDNI
EVRLTGWGIRDRHETLNSLHWGPDGWLYGCQGFATPSKVRKPTGKGRIYKHNDPFPED
ILNAEGVDINGGVWRYHPVKDKFEVVAHGFSNPWGIDYDAKGQLFISACVIPHMWHII
PGGVYHRQGGQHFNPYLYSDIRTIAEHSHRSAHGGARVYQSDAFPTEHQGRIFMANIH
EHAVLSDILENKGSGFVAKHGDDLLLANNAQWVGFSMEVGPDGGLYVLDWHDADICGK
EVLNGETGRVFRIMPTTSLAQNWEGRYADLTKLSDVQLVELQKSPSDWHSRRARLILQ
ARASKTALDKTAVANLQSIFQSHPNPDYRLRGMWSLHTTGNLTAEKLLTSLSDADPHI
RAWAIQLLCEDKAPSSAAVEKFVAMAKADPSPVVRLYLASAMQRLDKDSAWKIAEQLA
KHGEDQEDHNLPKMIWFGLEPLVKANPERALALAGQAEIPLISRYVARRIIDANAPDV
LVSALAKNPKRKINMLEGMRDGLEARYDLKAPANWAALYAKFRQAKGPVQDLATQIAQ
RFGDTEATQKALITLKNKNALLAQRQQALKTMAARKRTELVAEIPALLNEPALRLDVI
QAIADYDVESLAKLLIAQYPNFNAAEKQQAIQSLSSRPRYGWQLTQALKTEAIPKRDV
PPYAARQLLRVVGSGFIEVWGPIEQEPSLEKAYSKYQRMITEKALLSANAAKGELVFQ
AACGSCHKMYGKGGNIGPDLTGSNRANLDYILFNVLNPSGEIQDDYKLVVLTTRDGRT
YSGNVVSENERQLTFRTVGQEAVVLDKSAIQSREVMPTSLMPVGLFDPLSETEVLDLV
KYLRTTEGGKVGKK"
misc_feature complement(106827..107576)
/locus_tag="Halhy_0098"
/note="Methane oxygenase PmoA; Region: PmoA; pfam14100"
/db_xref="CDD:206269"
misc_feature complement(105648..106718)
/locus_tag="Halhy_0098"
/note="putative membrane-bound dehydrogenase domain;
Region: Piru_Ver_Nterm; TIGR02604"
/db_xref="CDD:162945"
misc_feature complement(105216..105482)
/locus_tag="Halhy_0098"
/note="HEAT repeats; Region: HEAT_2; pfam13646"
/db_xref="CDD:205823"
misc_feature complement(103938..104333)
/locus_tag="Halhy_0098"
/note="putative heme-binding domain,
Pirellula/Verrucomicrobium type; Region: CxxCH_TIGR02603"
/db_xref="CDD:131652"
misc_feature complement(<104181..104333)
/locus_tag="Halhy_0098"
/note="Cytochrome C oxidase, cbb3-type, subunit III;
Region: Cytochrome_CBB3; pfam13442"
/db_xref="CDD:205620"
gene 108186..110735
/locus_tag="Halhy_0099"
/db_xref="GeneID:10584250"
CDS 108186..110735
/locus_tag="Halhy_0099"
/note="InterPro IPR019734:IPR002182:IPR001440;
KEGG: pph:Ppha_1712 TPR repeat-containing protein;
PFAM: NB-ARC; Tetratricopeptide TPR-1;
SPTR: TPR repeat-containing protein;
IMG reference gene:2504769449;
PFAM: NB-ARC domain"
/codon_start=1
/transl_table=11
/product="NB-ARC domain-containing protein"
/protein_id="YP_004444885.1"
/db_xref="GI:332662097"
/db_xref="InterPro:IPR002182"
/db_xref="InterPro:IPR011990"
/db_xref="InterPro:IPR013026"
/db_xref="InterPro:IPR019734"
/db_xref="GeneID:10584250"
/translation="MDCILGAYWTLTRFLLSSPQDQKAKTMALPQYLSKIRQLIADDE
LPAALRQLHSLLENSRKLDEVIQQSGRFTHILKQIRLGTVHFEDATVTRNQISAALLE
LLSEIEKEGIKPELKAELKKAVSIVNSKNVASGTFSAGGDIKIGDTTTHVHNYRGVEI
PRLLTPPPFLPEIFLGRTDDLLRIHELLFAPNGNLLLLVNGEGGVGKTSIASKYFHTY
QEEYAHVAWVFKENSIADALLLLAMPLGVSFDEKWNTAQRLEVLLRAMLNLKKPCLLI
IDNANELHDLNAYLPQLQRCSNFHVLLTTRISEQGHAARYKIEALPQDLALHAFKSHY
KAFEASEEALFFDIYRAVQGNTLVLELLAKNLNNFNNKLKKRYLLADLKQELEQGLLK
LSKISTVDTRYQAKGTGLRNESIEVIIMAMYDLGDLSETENQLLAVFAVLPAESIPFE
RLETLLPEFAEIDTQLLALAQKGWIEYNADTAAFKCSPVVQEVVCMKQGDLLGNCQPL
IDGLIKELGRDKIHVDNYLHSSMFARYAEALINALSVVNYNLARLCEALGNFHREIGD
LNKSMALFQKAQEILLELLDAEPENSSFKYALAIMVCWIGMTYRDLGDLKKALTFFED
YNTLNKELYTVYPQNADFKHGLAISYTKLGETHRDLGNLQQALTFFEEYNTLEKELYA
AYPQDVSFKNNLAISYEKLGETHRDLGNLQQTLTFFELDIELSKELYAAYPQNVSFKN
GLAISYEKLGQTHRDLGNLPLALTFFEHFNTLEKELYTAYPQNVSFKNGLAYSFKFLG
LFYRDQKEDLQKAKEYFQQCYTLWQELSEVYPAYVEFSRNFEWAKEAMGEE"
misc_feature 109824..110078
/locus_tag="Halhy_0099"
/note="Tetratricopeptide repeat; Region: TPR_12;
pfam13424"
/db_xref="CDD:205602"
misc_feature 110121..110342
/locus_tag="Halhy_0099"
/note="Tetratricopeptide repeat; Region: TPR_12;
pfam13424"
/db_xref="CDD:205602"
misc_feature 110409..110657
/locus_tag="Halhy_0099"
/note="Tetratricopeptide repeat; Region: TPR_12;
pfam13424"
/db_xref="CDD:205602"
gene complement(111097..112299)
/locus_tag="Halhy_0100"
/db_xref="GeneID:10584251"
CDS complement(111097..112299)
/locus_tag="Halhy_0100"
/note="COGs: COG1960 Acyl-CoA dehydrogenase;
InterPro IPR006092:IPR006091:IPR006090;
KEGG: dal:Dalk_2466 acyl-CoA dehydrogenase domain protein;
PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA
oxidase/dehydrogenase, central region; Acyl-CoA
dehydrogenase, N-terminal;
PRIAM: (R)-benzylsuccinyl-CoA dehydrogenase;
SPTR: Acyl-CoA dehydrogenase domain protein;
IMG reference gene:2504769450;
PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA
dehydrogenase, middle domain; Acyl-CoA dehydrogenase,
N-terminal domain"
/codon_start=1
/transl_table=11
/product="(R)-benzylsuccinyl-CoA dehydrogenase"
/protein_id="YP_004444886.1"
/db_xref="GI:332662098"
/db_xref="InterPro:IPR006090"
/db_xref="InterPro:IPR006091"
/db_xref="InterPro:IPR006092"
/db_xref="InterPro:IPR009075"
/db_xref="InterPro:IPR009100"
/db_xref="InterPro:IPR013786"
/db_xref="GeneID:10584251"
/translation="MLTELIKSARVKALLPDIQAFMAAEVFPYDLAWSKLPFGELEPI
LEALREKVKARGWWLPCFDAHYGGMGLSLMEHAFISEAIGGSPFGYYLFNCQAPDIGN
MELLHLAGTEAQKEQFLQPLAEGQFRSCFAMTEPEFAGSNPVRMGTIAKRVGDEYIIN
GHKWFTTGFDGSELTIVMAVTDPEAAPYQRASMIIVPTDTPGLQLIRNLSIMGHAGSG
WPSHSEIRFENVRIPVENLLGGEGTGFMLAQVRLGPGRIHHCMRWMGICERAFDMMCR
YAATREIEDGVFLGEKQMVQQMIAESRAEIDAAKLMVLSTALLIEKAGQRAAAEQISA
IKFFTAKVLGDVLDRAIQVHGGLGITDDTILALYYREERAARIYDGTDETHKASLARK
ILKKYRGG"
misc_feature complement(111100..112278)
/locus_tag="Halhy_0100"
/note="Acyl-CoA dehydrogenases [Lipid metabolism]; Region:
CaiA; COG1960"
/db_xref="CDD:32143"
misc_feature complement(111115..112275)
/locus_tag="Halhy_0100"
/note="Acyl-CoA dehydrogenase; Region: ACAD; cl09933"
/db_xref="CDD:209100"
misc_feature complement(order(111151..111153,111157..111159,
111163..111171,111799..111801,111805..111807,
111901..111903,111907..111909,111997..111999))
/locus_tag="Halhy_0100"
/note="active site"
/db_xref="CDD:173838"
gene complement(112499..113566)
/locus_tag="Halhy_0101"
/db_xref="GeneID:10584252"
CDS complement(112499..113566)
/locus_tag="Halhy_0101"
/note="COGs: COG3173 aminoglycoside phosphotransferase;
InterPro IPR002575;
KEGG: sli:Slin_1393 aminoglycoside phosphotransferase;
PFAM: Aminoglycoside phosphotransferase;
SPTR: Aminoglycoside phosphotransferase;
IMG reference gene:2504769451;
PFAM: Phosphotransferase enzyme family"
/codon_start=1
/transl_table=11
/product="aminoglycoside phosphotransferase"
/protein_id="YP_004444887.1"
/db_xref="GI:332662099"
/db_xref="InterPro:IPR000719"
/db_xref="InterPro:IPR002575"
/db_xref="InterPro:IPR011009"
/db_xref="GeneID:10584252"
/translation="MTNIRLDAATEPRVGEELPLEKLNDYLHAAIPGFGNIIKVGQFG
GGYSNLTYQLQTADQTYVLRRPPFGAKDIKKGHNMAREYQILSTLHQAGYNKVPQVLL
CCEDESLLGFPFYLMEKIEGVILRGKMAHKIQIPAEQMRQLSISLIDALVELHQIDIE
QTGLIQLGKPEGYIRRQVEGWSQRYAAAQTDEIPQMEELSSWLIANLPAEGKPSFIHN
DFKYDNAILHPESLEISAILDWEMSTVGDPMMDFGTSLSYWCEAGDGDFEKSFNVSWL
PGNLTRQEVAEYYSEKSGRDTSNALYFYVFGLFKNAVIMQQIYSRYKKGYTQDERFAM
LIWGVQVLAKKAIQALEEDKI"
misc_feature complement(112562..113524)
/locus_tag="Halhy_0101"
/note="Predicted aminoglycoside phosphotransferase
[General function prediction only]; Region: COG3173"
/db_xref="CDD:32986"
misc_feature complement(112790..113455)
/locus_tag="Halhy_0101"
/note="Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal
domain, and similar proteins. This subfamily is part of a
larger superfamily that includes the catalytic domains of
other kinases, such as the typical
serine/threonine/tyrosine protein kinases (PKs); Region:
ACAD10_11_like; cd05154"
/db_xref="CDD:88617"
misc_feature complement(order(112793..112795,112850..112855,
112889..112891,112895..112900,112910..112912,
113207..113218,113273..113275,113375..113377,
113381..113383,113414..113416,113426..113428))
/locus_tag="Halhy_0101"
/note="putative active site [active]"
/db_xref="CDD:88617"
misc_feature complement(order(112793..112795,112910..112912,
113426..113428))
/locus_tag="Halhy_0101"
/note="putative substrate binding site [chemical binding];
other site"
/db_xref="CDD:88617"
misc_feature complement(order(112850..112855,112889..112891,
112895..112900,112910..112912,113207..113218,
113273..113275,113375..113377,113381..113383,
113414..113416))
/locus_tag="Halhy_0101"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:88617"
gene complement(113619..114173)
/locus_tag="Halhy_0102"
/db_xref="GeneID:10584253"
CDS complement(113619..114173)
/locus_tag="Halhy_0102"
/note="COGs: COG4636 conserved hypothetical protein;
InterPro IPR008538;
KEGG: cyh:Cyan8802_1423 protein of unknown function
DUF820;
PFAM: Protein of unknown function DUF820;
SPTR: uncharacterized protein;
IMG reference gene:2504769452;
PFAM: Protein of unknown function (DUF820)"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444888.1"
/db_xref="GI:332662100"
/db_xref="InterPro:IPR008538"
/db_xref="InterPro:IPR011335"
/db_xref="InterPro:IPR012296"
/db_xref="GeneID:10584253"
/translation="MATQIQKRLFTVAEYHKMGEVGILPERGVELINGEIIEMSPIGS
KHAKVVKKLNKMLGKIFGDEAIISIQDPIIANDLSEPEPDVAVLKYRADFYEDELPHG
EDVLLIIEVADTTLVYDSKVKLPLYAASGIPECWVIDLRKKEIQVYWQADDNAYRYLE
LFHLEDAIHAKTINLELSVAEIFG"
misc_feature complement(113664..114089)
/locus_tag="Halhy_0102"
/note="Domain of unknown function (DUF820). This family
consists of hypothetical proteins that are greatly
expanded in cyanobacteria. The proteins are found
sporadically in other bacteria. They have been predicted
to belong to the PD-(D/E)xK superfamily of...; Region:
DUF820; cd06260"
/db_xref="CDD:99749"
misc_feature complement(order(113793..113795,113805..113807,
113844..113846,113922..113924,114036..114038))
/locus_tag="Halhy_0102"
/note="putative active site [active]"
/db_xref="CDD:99749"
gene 114272..115234
/locus_tag="Halhy_0103"
/db_xref="GeneID:10584254"
CDS 114272..115234
/locus_tag="Halhy_0103"
/note="COGs: COG0604 NADPH:quinone reductase and related
Zn-dependent oxidoreductase;
InterPro IPR013154:IPR013149;
KEGG: sli:Slin_5560 alcohol dehydrogenase zinc-binding
domain protein;
PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol
dehydrogenase GroES-like;
PRIAM: NADPH:quinone reductase;
SPTR: Alcohol dehydrogenase zinc-binding domain protein;
IMG reference gene:2504769453;
PFAM: Alcohol dehydrogenase GroES-like domain;
Zinc-binding dehydrogenase"
/codon_start=1
/transl_table=11
/product="NADPH:quinone reductase"
/protein_id="YP_004444889.1"
/db_xref="GI:332662101"
/db_xref="InterPro:IPR002085"
/db_xref="InterPro:IPR011032"
/db_xref="InterPro:IPR013149"
/db_xref="InterPro:IPR013154"
/db_xref="InterPro:IPR016040"
/db_xref="GeneID:10584254"
/translation="MKALVLSDQHTPPTYQQAPDPILEPGEVLVEIKAAALNHRDLFV
TQGKYAGIRFPIILGSDGAGICEGKEVVINPALDWGTSDRFQSKDFQILGLPRNGTLA
EKIAIPESQIYPKPHHLNWKEAAALPLAGLTAYRALFTKGRCAAGDRVLITGIGGGVA
LFALQFAKAVDAEVWVTSSSDEKIERAIALGASGGVNYTTPDWNKQLETAGGFDIVID
GAGGEGFGLLLKLCKSGARVVSYGGTIGVVPNFSPQILFWKQLEILGSTMGTEEEFGE
MLAFVAEHKIHPVIDQVFSLKDGAQAFQRMDEGGQFGKIVLKVH"
misc_feature 114272..115228
/locus_tag="Halhy_0103"
/note="Medium chain reductase/dehydrogenase
(MDR)/zinc-dependent alcohol dehydrogenase-like family;
Region: MDR; cl16912"
/db_xref="CDD:211475"
misc_feature 114272..115228
/locus_tag="Halhy_0103"
/note="NADPH:quinone reductase and related Zn-dependent
oxidoreductases [Energy production and conversion /
General function prediction only]; Region: Qor; COG0604"
/db_xref="CDD:30949"
misc_feature order(114383..114391,114398..114400,114656..114658,
114668..114670,114731..114742,114746..114751,
114803..114808,114818..114820,114863..114865,
114926..114931,114992..114997,115067..115075)
/locus_tag="Halhy_0103"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:176178"
gene complement(115246..116517)
/locus_tag="Halhy_0104"
/db_xref="GeneID:10584255"
CDS complement(115246..116517)
/locus_tag="Halhy_0104"
/note="COGs: COG1914 Mn2+ and Fe2+ transporter of the
NRAMP family;
KEGG: sli:Slin_6795 natural resistance-associated
macrophage protein;
SPTR: Natural resistance-associated macrophage protein;
IMG reference gene:2504769454;
PFAM: Natural resistance-associated macrophage protein;
TIGRFAM: NRAMP (natural resistance-associated macrophage
protein) metal ion transporters"
/codon_start=1
/transl_table=11
/product="natural resistance-associated macrophage
protein"
/protein_id="YP_004444890.1"
/db_xref="GI:332662102"
/db_xref="InterPro:IPR001046"
/db_xref="GeneID:10584255"
/translation="MNKRTQRKNKLYRFWKVLGPGLITGASDDDPSGIATYSQAGAAF
GLSTLWTALIAFPLMAALQQMCAKIGLVTGHGLTGALKEHYSRPVLYVMLLFSFPAIV
MNIGADIAAMGAVGNLLFPAIETTYFSVFFTILLLVLIVYLPYQKIASILKYLCLVLL
VYLIVPFLYPQDWLAVLKATFIPSIKFDKEFISILVGILGTTISPYLFFWQASMEVEE
MKHKSKHLVVNKKVIHEMEQDVDFGMSFSGLVMFFIILTTGTVLFKGGIHQIDTVEQA
ALALKPLAGNAAYLLFAIGVIGTGLLAIPVLSGCLSYIITETFGWEQGLDKKFHEAKA
FYLVIAVSLLLGLSLNYIGISPIQALIYSAIFYGMTAPVLIAIILHIANNKAIMGKHT
NTTTANVLGFAALTIMTVSAVVLLLFQFGVL"
misc_feature complement(115258..116511)
/locus_tag="Halhy_0104"
/note="manganese transport protein MntH; Reviewed; Region:
PRK00701; cl15845"
/db_xref="CDD:210245"
misc_feature complement(115336..116418)
/locus_tag="Halhy_0104"
/note="Natural resistance-associated macrophage protein;
Region: Nramp; pfam01566"
/db_xref="CDD:201864"
gene 116636..117925
/locus_tag="Halhy_0105"
/db_xref="GeneID:10584256"
CDS 116636..117925
/locus_tag="Halhy_0105"
/note="KEGG: dfe:Dfer_2270 hypothetical protein;
SPTR: uncharacterized protein;
IMG reference gene:2504769455"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444891.1"
/db_xref="GI:332662103"
/db_xref="GeneID:10584256"
/translation="MAEISEKHDLASYLELLEAKLNWGSSQYWVNYDFEKLSQEIEHK
TGVTLSVTTLKRIWGKVKYPHAPTLTTLNTLAQYLDYDDWRAFTQALKLRAQNLERSE
VAQNAELPLPEKRRTWLKRPWLLLAVLLLLTIFAVSPVVPDFFAFKVDQHQYQFKANK
IVAEGVPNTVIFNYDASASPTDSVYIVQTWDMRRKTRVPKDKHAHSAIYYYPGFFRTK
LIVGNSIVKTHDLQISSDGWLALVEQEPVPIYFKKEDYLKADGVDIGTTTLKKYNLAL
LPNPPKIRVFNQGDMGELMNDNFTFETTVKNAFSEGSNACQFVEVLIQCKDDIIIIPL
ADKACAGDLRIYAAGAPAESKYADLSGFGCDLNEWTTLKVVTKDKKMSFYVNGKKAHS
LTFPNTPTGIVGVQYRFNGLGAVKDAKFSHGDFEVKL"
misc_feature 117515..>117835
/locus_tag="Halhy_0105"
/note="Laminin G domain; Laminin G-like domains are
usually Ca++ mediated receptors that can have binding
sites for steroids, beta1 integrins, heparin, sulfatides,
fibulin-1, and alpha-dystroglycans. Proteins that contain
LamG domains serve a variety of...; Region: LamG; cl00102"
/db_xref="CDD:206838"
gene 118009..118515
/locus_tag="Halhy_0106"
/db_xref="GeneID:10584257"
CDS 118009..118515
/locus_tag="Halhy_0106"
/note="COGs: COG0622 phosphoesterase;
InterPro IPR004843:IPR000979;
KEGG: cpi:Cpin_2013 phosphodiesterase, MJ0936 family;
PFAM: Metallophosphoesterase;
SPTR: Phosphodiesterase, MJ0936 family;
TIGRFAM: Uncharacterised protein family UPF0025;
IMG reference gene:2504769456;
TIGRFAM: phosphoesterase, MJ0936 family"
/codon_start=1
/transl_table=11
/product="phosphodiesterase"
/protein_id="YP_004444892.1"
/db_xref="GI:332662104"
/db_xref="GeneID:10584257"
/translation="MLRIGLLSDTHSYLDETIFDFFTECDEIWHAGDIGNPEIADRLE
AFRPFKAVFGNIDDKDIRLRYPEDLRFTCEGLDVFMTHIGGYPGKYNQRVREILRADP
PKLFICGHSHILKVMPDPGLGLLHINPGACGQEGFHKMRTIIRFSIDQGKPKDLQVIE
LGKRGALI"
misc_feature 118015..118461
/locus_tag="Halhy_0106"
/note="Escherichia coli YfcE and related proteins,
metallophosphatase domain; Region: MPP_YfcE; cd00841"
/db_xref="CDD:163617"
misc_feature order(118033..118035,118039..118041,118105..118107,
118171..118176,118252..118254,118336..118338,
118342..118344)
/locus_tag="Halhy_0106"
/note="active site"
/db_xref="CDD:163617"
misc_feature order(118033..118035,118039..118041,118105..118107,
118171..118173,118252..118254,118336..118338,
118342..118344)
/locus_tag="Halhy_0106"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:163617"
misc_feature order(118084..118089,118156..118158,118165..118179,
118204..118239,118258..118260)
/locus_tag="Halhy_0106"
/note="homotetramer interface [polypeptide binding]; other
site"
/db_xref="CDD:163617"
gene 118643..119821
/locus_tag="Halhy_0107"
/db_xref="GeneID:10584258"
CDS 118643..119821
/locus_tag="Halhy_0107"
/note="COGs: COG1092 SAM-dependent methyltransferase;
InterPro IPR002478:IPR003402;
KEGG: sli:Slin_0528 methyltransferase;
PFAM: Protein of unknown function Met10;
PRIAM: rRNA (guanine-N(2)-)-methyltransferase;
SMART: Pseudouridine synthase/archaeosine
transglycosylase;
SPTR: Methyltransferase;
IMG reference gene:2504769457;
PFAM: S-adenosylmethionine-dependent methyltransferase"
/codon_start=1
/transl_table=11
/product="rRNA (guanine-N(2)-)-methyltransferase"
/protein_id="YP_004444893.1"
/db_xref="GI:332662105"
/db_xref="InterPro:IPR002478"
/db_xref="InterPro:IPR015947"
/db_xref="InterPro:IPR019614"
/db_xref="GeneID:10584258"
/translation="MKQIFLKDKRDAAVLRFHPWVFSGAVARKSGAIEDGEWVEVRSH
KSDLLGMGHYQDGSICVRLLSFQPAEIDQSFWTKKIANAYQYRKAIELTDRELINCYR
LVHGEGDGLPGLVIDIYGEVAVVQCHSIGMHKDRTFIAQALQDVYGAKLKAVFDKSAE
SLPKDYAGKMQNGYLYGTGGEPVVKEYGALFSIDWETGQKTGFFLDQRENRRLLGEYA
TGKKVLNAFCYTGGFSIYALKAGAHSVDSVDVSAKAMELTDKNVALNGYDDSRHQSYT
SDVLDFLRKTHNTYDLMIVDPPAFAKNMEKRHNAVQGYKRLNAQAMEKINPGGILFTF
SCSQVVNKQLFYDTIVAAALEAGRQVRVMHQLSQGPDHPVNMFHPEGEYLKGLVLYVE
"
misc_feature 118652..119818
/locus_tag="Halhy_0107"
/note="Predicted SAM-dependent methyltransferases [General
function prediction only]; Region: COG1092"
/db_xref="CDD:31289"
misc_feature 118862..119173
/locus_tag="Halhy_0107"
/note="Middle domain of the SAM-dependent
methyltransferase RlmI and related proteins; Region:
RlmI_M_like; cd11572"
/db_xref="CDD:211413"
misc_feature order(118946..118948,119018..119020)
/locus_tag="Halhy_0107"
/note="putative RNA binding site [nucleotide binding];
other site"
/db_xref="CDD:211413"
misc_feature 119306..119641
/locus_tag="Halhy_0107"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cd02440"
/db_xref="CDD:100107"
misc_feature order(119318..119338,119387..119392,119471..119479,
119528..119530)
/locus_tag="Halhy_0107"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
gene 119946..122213
/locus_tag="Halhy_0108"
/db_xref="GeneID:10584259"
CDS 119946..122213
/locus_tag="Halhy_0108"
/note="COGs: COG0542 ATPase with chaperone activity
ATP-binding subunit;
InterPro IPR003593:IPR013093:IPR019489;
KEGG: hch:HCH_05499 chaperone activity ATPase ATP-binding
subunit;
PFAM: ATPase associated with various cellular activities,
AAA-2; Clp ATPase, C-terminal;
SPTR: Chaperone ClpB, ;
IMG reference gene:2504769458;
PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small
domain, of ClpB protein"
/codon_start=1
/transl_table=11
/product="ATPase AAA"
/protein_id="YP_004444894.1"
/db_xref="GI:332662106"
/db_xref="InterPro:IPR001270"
/db_xref="InterPro:IPR013093"
/db_xref="InterPro:IPR019489"
/db_xref="GeneID:10584259"
/translation="MERLHYPILYYPISDQAVLGLLVGSEQQAIAANVDTLKLKFQNH
LQREYKKTGTYPEIRINEAKLKVFTISFRPSLRDSSGVYPLPREVVIPIPAVFGASDS
GFYHCYLPVFQEGFIYYSPEHFEALTDYVAISNLNRSTPEDIYKLMRYGNPGLTSIEL
RVNPRNNYYWKSNWNFRNQQTTLSRLGEAYPPLKATRRLNRLAPDVAWEREAIIEQVV
EKVLSSRANVLIIGNPGSGKSAVLQAAIRKMTNKAKSAKLKLNFWRILPQRITNSAKY
LGEWQATCEELIEEAASTNSILWVVSMVRLLMSGGTGPEDSVAAFFRPVLNQGKVQMI
GEATPQELESMRRLMPGFVDAFHLIHLEEMAEFQVQNVLAKYALFAQNTLKINIEKAA
LDLSYRLLSRFYPYESFPGKAVKFLGKCMADARLNRSETIGVEDINEHFIQQTGLPEL
LLNDDLEWDEAELLRFFHDRIIGQPRAVEQLCSLVKIFKAGINNPQRPIATLIFAGPT
GVGKTACAKTLAEYFFGKGQQKTPLIRIDMSEYQHAFQIDRLIGADREPGQLVKEVRE
KPFAVLLLDEIEKADPAIFDALLAVLDDGMLVDGFGRVTHFKNTIIIMTSNLGASSRR
SMSFSDTTSAENRYLSAIMQHFRPEFVNRIDSVVVFDELSKEGIRNLAKRELHELGRR
EGFTKKKIQLQFSERLIDYLVTIGFDERYGARPMQRAIEQGVIGPLALWLLENPDTTN
HTLVVDYEGGIVIQS"
misc_feature <120573..122204
/locus_tag="Halhy_0108"
/note="ATP-binding subunits of Clp protease and DnaK/DnaJ
chaperones [Posttranslational modification, protein
turnover, chaperones]; Region: clpA; COG0542"
/db_xref="CDD:30888"
misc_feature 120597..>120719
/locus_tag="Halhy_0108"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:213113"
misc_feature 121428..121931
/locus_tag="Halhy_0108"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature 121461..121484
/locus_tag="Halhy_0108"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature order(121464..121487,121668..121670,121794..121796)
/locus_tag="Halhy_0108"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature 121656..121673
/locus_tag="Halhy_0108"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature 121902..121904
/locus_tag="Halhy_0108"
/note="arginine finger; other site"
/db_xref="CDD:99707"
misc_feature 121932..122180
/locus_tag="Halhy_0108"
/note="C-terminal, D2-small domain, of ClpB protein;
Region: ClpB_D2-small; pfam10431"
/db_xref="CDD:204486"
gene 122232..123365
/locus_tag="Halhy_0109"
/db_xref="GeneID:10584260"
CDS 122232..123365
/locus_tag="Halhy_0109"
/note="COGs: COG5505 integral membrane protein;
InterPro IPR008537;
KEGG: ssm:Spirs_3917 protein of unknown function DUF819;
PFAM: Protein of unknown function DUF819;
SPTR: Conserved uncharacterized protein;
IMG reference gene:2504769459;
PFAM: Protein of unknown function (DUF819)"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444895.1"
/db_xref="GI:332662107"
/db_xref="InterPro:IPR008537"
/db_xref="GeneID:10584260"
/translation="METLHILVQVLVMLIFPFVAQRSKHWGQFGNFLSPVVLCYIFGM
ILSNFNLVQTPLTFRETCSQISIALALPLLLYSSDLSFVYRNLKVFMLSFVLAVLSAV
VATGAISYLFFANFPFIHQAAGMLLAVYVGGTVNLFATGYGLEASADFIGLVNAADIV
VGGSYLLILTSVGPKLVALVLRRKVSNEYTHVEEDEKAGTLSMGMIAACLLSSVLILA
ISVGTSFLVFGNMKNGTFLILCLTTLSIAASRLEIIKKLRGSFQVGEYLLLMFCVGLG
LLADLEQLVGGGFQIVLLTIATILGTVGLHLILAKIFKVDDEAFLVTSTATIFGPPFI
PQIAATIGNPKVILPGIAAALMGIMLANYLGISLGWFLAWLLN"
misc_feature <122577..123356
/locus_tag="Halhy_0109"
/note="Protein of unknown function (DUF819); Region:
DUF819; cl02317"
/db_xref="CDD:121235"
gene 123506..124345
/locus_tag="Halhy_0110"
/db_xref="GeneID:10584261"
CDS 123506..124345
/locus_tag="Halhy_0110"
/note="InterPro IPR002559;
KEGG: npu:Npun_BR171 transposase, IS4 family protein;
PFAM: Transposase, IS4-like;
SPTR: Transposase, IS4 family protein;
IMG reference gene:2504769460;
PFAM: Transposase DDE domain"
/codon_start=1
/transl_table=11
/product="transposase IS4 family protein"
/protein_id="YP_004444896.1"
/db_xref="GI:332662108"
/db_xref="InterPro:IPR002559"
/db_xref="GeneID:10584261"
/translation="MKYFTVAIYITISDMLQAMHHKEDEQRRIDDATIITTLVVSSRY
FGGNIQNTLSYMKSDHCPGMLSKSQFNRRMHHIKDLIQAVFEVFSSVFKQENERQYYL
LDSFPVKVCHNIRISRNRLLGYNDIFRGKNASKREYFYGFKAGVLCTEEGIPVEIALL
PGSYHDARFLNRMDFNIPPEASIFGDNAFENHDLEDNSGQMGQIIWETMRKKNTSRGD
IYQIRLWKKAIRRQIESVFSAICAAMPKTIHAVTPDGFNLKTFMFIFAYALSFLFNEQ
EFV"
misc_feature 123803..124219
/locus_tag="Halhy_0110"
/note="DDE superfamily endonuclease; Region: DDE_4;
cl15789"
/db_xref="CDD:211471"
gene 124443..125225
/locus_tag="Halhy_0111"
/db_xref="GeneID:10584262"
CDS 124443..125225
/locus_tag="Halhy_0111"
/note="COGs: COG0384 epimerase PhzC/PhzF homolog;
InterPro IPR003719;
KEGG: axy:AXYL_04316 phenazine biosynthesis protein PhzF
family protein 3;
PFAM: Phenazine biosynthesis PhzC/PhzF protein;
SPTR: Phenazine biosynthesis protein PhzF family protein
3;
TIGRFAM: Phenazine biosynthesis PhzC/PhzF protein;
IMG reference gene:2504769461;
PFAM: Phenazine biosynthesis-like protein;
TIGRFAM: phenazine biosynthesis protein PhzF family"
/codon_start=1
/transl_table=11
/product="phenazine biosynthesis protein PhzF family
protein"
/protein_id="YP_004444897.1"
/db_xref="GI:332662109"
/db_xref="InterPro:IPR003719"
/db_xref="GeneID:10584262"
/translation="MELSIYQVDAFANAVFQGNPAAVVPLDAWLPDAVLQNIATENNL
SETAYFVPEGEGYHLRWFTPAMEVRLCGHATLASAHVLFAHLGYNKASISFNTLGGNL
LVRKVADQYVMDFPTDEPQPFHVLRNLEETLGVQILEMAKGTDDYLAMIESEEMLMAL
RPNFRMLSELKTRGLIVTAPGTSTDIATRCFFPSFGIDEDPVTGSAHTLLTPFWAKKL
GKTSISAIQGGARKGQLHCELKGDRVELMGKAQTYLIGKIWV"
misc_feature 124443..125216
/locus_tag="Halhy_0111"
/note="Predicted epimerase, PhzC/PhzF homolog [General
function prediction only]; Region: COG0384"
/db_xref="CDD:30733"
gene complement(125235..126179)
/locus_tag="Halhy_0112"
/db_xref="GeneID:10584263"
CDS complement(125235..126179)
/locus_tag="Halhy_0112"
/note="COGs: COG1092 SAM-dependent methyltransferase;
KEGG: cpi:Cpin_6906 methyltransferase type 11;
PRIAM: rRNA (guanine-N(2)-)-methyltransferase;
SPTR: Methyltransferase type 11;
IMG reference gene:2504769462;
PFAM: S-adenosylmethionine-dependent methyltransferase"
/codon_start=1
/transl_table=11
/product="rRNA (guanine-N(2)-)-methyltransferase"
/protein_id="YP_004444898.1"
/db_xref="GI:332662110"
/db_xref="InterPro:IPR017244"
/db_xref="InterPro:IPR019614"
/db_xref="GeneID:10584263"
/translation="MATQEFENRLQKVDRHISKWARRQGVTCYRVYDDDLTNFPLVID
RYEEALHVAEYHRQHDLDEFQHQQWLEDCLDSISKVMVVPRHLIFFKERKRQKGQQQY
EKVDAEKHQRLVRENGLNFLVNLSDYVDTGLFLDHRNTRQMIREQAEGKHFLNLFAYT
GAFTIYAAAGGARSTTTVDLSNTYLDWARANLNINNFGQQIDKTHFLVRADVKQYLDT
LRPHQFDLVLIDPPTFSNSKMMKEVLDTQRDHVDLLNKVIYATIPGGTIYFSTNYRSF
KLDAEALKGVEIEEISQRSIPMDFRDKKIHRCFRMQRV"
misc_feature complement(125370..125723)
/locus_tag="Halhy_0112"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cd02440"
/db_xref="CDD:100107"
misc_feature complement(order(125490..125492,125544..125552,
125640..125645,125694..125714))
/locus_tag="Halhy_0112"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
gene complement(126179..127291)
/locus_tag="Halhy_0113"
/db_xref="GeneID:10584264"
CDS complement(126179..127291)
/locus_tag="Halhy_0113"
/note="COGs: COG3616 amino acid aldolase or racemase;
InterPro IPR001608;
KEGG: dfe:Dfer_1026 alanine racemase domain protein;
PFAM: Alanine racemase, N-terminal;
SPTR: Alanine racemase domain protein;
IMG reference gene:2504769463;
PFAM: Alanine racemase, N-terminal domain"
/codon_start=1
/transl_table=11
/product="alanine racemase"
/protein_id="YP_004444899.1"
/db_xref="GI:332662111"
/db_xref="InterPro:IPR001608"
/db_xref="GeneID:10584264"
/translation="MDNNWFLLKDTTPIDSPALLLYKDRVASNINLMLQIAGSAERLI
PHVKTYKMTELVRMQLMQGITRFKCATIAEAEMTARAGASTVIIAHQLVGPKIERLAQ
LVQTFPKVEFISLVDCAESASAHQVVFSSHRLTANILVDVNNAMDRSGHPLNDELFPF
YQSLFRYPYLKVLGLHVYDGSFRDADFAARKAKSDQAFQGVSVLLQQISAAGLPDPLV
IAGGSPAQNVHAQREGVHLSPGTCLVWDWGYGEGLPDQPFQWAGLVFTRVISKPKPGY
LTVDLGHKAIAAENSIDKRVKFLNLDQYSFVSQSEEHLVLEVADWEKWKVGDALYGVP
YHICPTINLYEEALVIQNGEWVDTWQVVARKRKISI"
misc_feature complement(126185..127270)
/locus_tag="Halhy_0113"
/note="Type III Pyridoxal 5-phosphate (PLP)-Dependent
Enzyme D-Threonine Aldolase; Region: PLPDE_III_D-TA;
cd06821"
/db_xref="CDD:143495"
misc_feature complement(126203..127255)
/locus_tag="Halhy_0113"
/note="Predicted amino acid aldolase or racemase [Amino
acid transport and metabolism]; Region: COG3616"
/db_xref="CDD:33415"
misc_feature complement(order(126239..126241,126440..126445,
126452..126454,126458..126460,126464..126466,
126476..126487,126842..126853,126920..126922,
126932..126934,126941..126943,127004..127006,
127052..127054,127070..127075,127079..127084,
127142..127144,127148..127150,127244..127246))
/locus_tag="Halhy_0113"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:143495"
misc_feature complement(order(126443..126445,126569..126580,
126617..126622,126758..126760,126848..126850,
126869..126871,127025..127027,127088..127090,
127148..127150,127154..127156))
/locus_tag="Halhy_0113"
/note="active site"
/db_xref="CDD:143495"
misc_feature complement(order(126569..126580,126617..126622,
126758..126760,126869..126871,127025..127027,
127088..127090,127148..127150,127154..127156))
/locus_tag="Halhy_0113"
/note="pyridoxal 5'-phosphate (PLP) binding site [chemical
binding]; other site"
/db_xref="CDD:143495"
misc_feature complement(order(126569..126571,126758..126760,
126848..126850,127148..127150))
/locus_tag="Halhy_0113"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:143495"
misc_feature complement(127148..127150)
/locus_tag="Halhy_0113"
/note="catalytic residue [active]"
/db_xref="CDD:143495"
gene 127488..128444
/locus_tag="Halhy_0114"
/db_xref="GeneID:10584265"
CDS 127488..128444
/locus_tag="Halhy_0114"
/note="COGs: COG1397 ADP-ribosylglycohydrolase;
InterPro IPR005502;
KEGG: cpi:Cpin_0076 ADP-ribosylation/crystallin J1;
PFAM: ADP-ribosylation/Crystallin J1;
SPTR: ADP-ribosylation/Crystallin J1;
IMG reference gene:2504769464;
PFAM: ADP-ribosylglycohydrolase"
/codon_start=1
/transl_table=11
/product="ADP-ribosylation/Crystallin J1"
/protein_id="YP_004444900.1"
/db_xref="GI:332662112"
/db_xref="InterPro:IPR005502"
/db_xref="GeneID:10584265"
/translation="MNIVRDALLGLAVADALGVPVEFQSREALAENPVIGMRGYGTYS
QPAGTWSDDSSLTFCLAESLLQGFDLANMAQKFVDWSNARIWTPYGTVFDIGITTREA
MEVLEDILTTGDHEALLYLHQEADEMSNGNGSLMRILPLLFYLKDQPADTWFETTWRV
SALTHGHIRAAVACWYYLRMAWHLWQNKDKRAAHLEVRTEARELFKKHNISFSEQRIF
SRVVEHNISFLPSSEIQSAGYVMHSLEAALWCLLRYNTYEETVLAAVNLGHDTDTTAA
IVGGLAGILYGADAIPSEWQNQLARLPDVLQLCDDVYARWLK"
misc_feature 127545..128372
/locus_tag="Halhy_0114"
/note="ADP-ribosylglycohydrolase; Region: ADP_ribosyl_GH;
pfam03747"
/db_xref="CDD:202756"
gene complement(128602..129075)
/locus_tag="Halhy_0115"
/db_xref="GeneID:10584266"
CDS complement(128602..129075)
/locus_tag="Halhy_0115"
/note="InterPro IPR000086;
KEGG: dfe:Dfer_2836 NUDIX hydrolase;
PFAM: NUDIX hydrolase domain;
SPTR: NUDIX hydrolase;
IMG reference gene:2504769465;
PFAM: NUDIX domain"
/codon_start=1
/transl_table=11
/product="NUDIX hydrolase"
/protein_id="YP_004444901.1"
/db_xref="GI:332662113"
/db_xref="InterPro:IPR000086"
/db_xref="InterPro:IPR015797"
/db_xref="InterPro:IPR020084"
/db_xref="GeneID:10584266"
/translation="MISVLINEKRFNYRIAAVILNEGRVLVHRGEQEDFWSLPGGRCE
MMEFSADTLKREMMEEIGEELEIGKLLWLVENMHVFNDREVHELCFFYQANLSANSPL
LKEYEFIGYEPDAKLIYQWQDLAQIQSLDLKPAFLQTGLVNLPLHIEHICVSLSE"
misc_feature complement(128665..129042)
/locus_tag="Halhy_0115"
/note="Nudix hydrolase is a superfamily of enzymes found
in all three kingdoms of life, and it catalyzes the
hydrolysis of NUcleoside DIphosphates linked to other
moieties, X. Enzymes belonging to this superfamily require
a divalent cation, such as Mg2+ or Mn2+...; Region:
Nudix_Hydrolase; cl00447"
/db_xref="CDD:212606"
misc_feature complement(order(128893..128919,128947..128955))
/locus_tag="Halhy_0115"
/note="nudix motif; other site"
/db_xref="CDD:72880"
gene 129290..130000
/locus_tag="Halhy_0116"
/db_xref="GeneID:10584267"
CDS 129290..130000
/locus_tag="Halhy_0116"
/note="IMG reference gene:2504769466"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444902.1"
/db_xref="GI:332662114"
/db_xref="GeneID:10584267"
/translation="MKKQSAHRQYNFPDADLYLLCMERIRDAHRDLQYFEQYGYSLDR
LKGFKTLCDQLNTLADDDELVGEQMLMTEKKDAAAEKLKTAVRSLMTRVAMKYNNRSG
RYRKFGTAKMGDMTDAQLLFCGRRVVRVARQQIDFLAEVGVNETQIQRVVDAHQEFEN
ALNIQQDKIADRDISVERRIDQGNKLYQELIVLCNIGKDIWAERDVSKYESYTIYESN
NDQKIARKAKLSQEGISS"
gene 130175..130606
/locus_tag="Halhy_0117"
/db_xref="GeneID:10584268"
CDS 130175..130606
/locus_tag="Halhy_0117"
/note="IMG reference gene:2504769467"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444903.1"
/db_xref="GI:332662115"
/db_xref="GeneID:10584268"
/translation="MNMFKAFKLKSWVFAALVLATTMLACDSKDDAKPDQSKVEGKWK
LESISGGFAGNGYTADWNYLEMNANKTYRRLQNDTLRYQGTYELQEKDGKTYIDFKVG
ATPSNSPFEDQDKEVAFDKDKLILSDPCCDLYQYEFSKAKN"
misc_feature 130388..>130579
/locus_tag="Halhy_0117"
/note="acetylornithine aminotransferase; Provisional;
Region: PRK04260"
/db_xref="CDD:179803"
gene complement(130666..131193)
/locus_tag="Halhy_0118"
/db_xref="GeneID:10584269"
CDS complement(130666..131193)
/locus_tag="Halhy_0118"
/note="COGs: COG0229 Conserved domain frequently
associated with peptide methionine sulfoxide reductase;
HAMAP: Peptide methionine sulfoxide reductase msrB;
InterPro IPR002579;
KEGG: lbl:LBL_2533 methionine sulfoxide reductase B;
PFAM: Methionine sulphoxide reductase B;
PRIAM: Peptide-methionine (R)-S-oxide reductase;
SPTR: methionine sulfoxide reductase, SelR;
TIGRFAM: Methionine sulphoxide reductase B;
IMG reference gene:2504769468;
PFAM: SelR domain;
TIGRFAM: methionine-R-sulfoxide reductase"
/codon_start=1
/transl_table=11
/product="peptide methionine sulfoxide reductase"
/protein_id="YP_004444904.1"
/db_xref="GI:332662116"
/db_xref="InterPro:IPR002579"
/db_xref="InterPro:IPR011057"
/db_xref="GeneID:10584269"
/translation="MIIRTSFLFIVTLLVFFSCNRAQPTSKNEVDPQGKFVSLKGEIL
GPVIKTDEEWKKELDELEFHVLRQAGTEQAFTGKLWDNHEQGVYTCRGCDLPLFDAET
KFESGTGWPSFWEVYMKGNVAKKSDNTLGMMRTEVFCARCGGHLGHVFPDGPKPTGLR
YCINSVSLKFVAEKK"
misc_feature complement(130669..131007)
/locus_tag="Halhy_0118"
/note="methionine sulfoxide reductase B; Provisional;
Region: PRK00222"
/db_xref="CDD:178935"
misc_feature complement(130669..131004)
/locus_tag="Halhy_0118"
/note="methionine sulfoxide reductase B; Provisional;
Region: PRK05508"
/db_xref="CDD:180121"
gene complement(131224..131688)
/locus_tag="Halhy_0119"
/db_xref="GeneID:10584270"
CDS complement(131224..131688)
/locus_tag="Halhy_0119"
/note="IMG reference gene:2504769469"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444905.1"
/db_xref="GI:332662117"
/db_xref="GeneID:10584270"
/translation="MKETANSSWANIANPIFQALIAFGGVVLVNLSAIALEWMGAWVL
EERFSYLTAASFLLCFAMFNSVLSLLAPNTLQYWGKSIYCFLGLVLSSVTLARALSGL
RLSEAGSYWWILIVVTFGYLVFLALVNTIRSIVTFAQKEEWNQPRFRRGNRK"
gene complement(131778..133091)
/locus_tag="Halhy_0120"
/db_xref="GeneID:10584271"
CDS complement(131778..133091)
/locus_tag="Halhy_0120"
/note="COGs: COG0621 2-methylthioadenine synthetase;
HAMAP: Ribosomal protein S12 methylthiotransferase RimO;
InterProIPR006638:IPR005840:IPR013848:IPR007197:IPR
005839;
KEGG: mtt:Ftrac_1929 SSU ribosomal protein s12p
methylthiotransferase;
PFAM: Methylthiotransferase, N-terminal; Radical SAM;
SMART: Elongator protein 3/MiaB/NifB;
SPTR: SSU ribosomal protein S12P methylthiotransferase;
TIGRFAM: Ribosomal protein S12 methylthiotransferase RimO;
Methylthiotransferase;
IMG reference gene:2504769470;
PFAM: Radical SAM superfamily; Uncharacterized protein
family UPF0004;
TIGRFAM: ribosomal protein S12 methylthiotransferase RimO;
radical SAM methylthiotransferase, MiaB/RimO family"
/codon_start=1
/transl_table=11
/product="30S ribosomal protein S12 methylthiotransferase"
/protein_id="YP_004444906.1"
/db_xref="GI:332662118"
/db_xref="InterPro:IPR002792"
/db_xref="InterPro:IPR005839"
/db_xref="InterPro:IPR005840"
/db_xref="InterPro:IPR007197"
/db_xref="InterPro:IPR012340"
/db_xref="InterPro:IPR013848"
/db_xref="InterPro:IPR020612"
/db_xref="GeneID:10584271"
/translation="MKARTLKADKVNVITLGCSKNLVDSENLITQLRGNDFDVVHDSQ
EEDANVVIINTCGFIDLAKQESIDTILEYAEVKKAGGIDKLFVTGCLSQRYKEDLELE
IPEVDAYFGTLELPGLLAKLNADYKHELIGERLITTPMHYAYLKISEGCNRTCSFCAI
PLMRGGHVSRPIEELVKEAQSLARRGVKEIMLIAQELTYYGLDIYKKRDLPRLLHALA
DVEGIEWIRLHYAYPSKFPLEILDVIAERPEICNYLDMPLQHASNSVLERMRRQITRE
ETTELIQQARLRIPNLTLRTTMLVGYPQESDQEFQELCDFVQEMEFDRMGVFQYSHEE
STRAYDVDDDVPAEVKAERANALMEIQQEISTRKNFEKVGKTFKTLFDRKEGGYFVGR
TEGDSPEVDNEVLVPAKKNFARIGDFAQVRIAEASEYDIFGEIIA"
misc_feature complement(131793..133064)
/locus_tag="Halhy_0120"
/note="ribosomal protein S12 methylthiotransferase RimO;
Region: TIGR01125"
/db_xref="CDD:162211"
misc_feature complement(132759..133064)
/locus_tag="Halhy_0120"
/note="Uncharacterized protein family UPF0004; Region:
UPF0004; pfam00919"
/db_xref="CDD:201505"
misc_feature complement(132048..132659)
/locus_tag="Halhy_0120"
/note="Radical SAM superfamily. Enzymes of this family
generate radicals by combining a 4Fe-4S cluster and
S-adenosylmethionine (SAM) in close proximity. They are
characterized by a conserved CxxxCxxC motif, which
coordinates the conserved iron-sulfur cluster; Region:
Radical_SAM; cd01335"
/db_xref="CDD:100105"
misc_feature complement(order(132102..132107,132195..132197,
132321..132323,132399..132407,132504..132509,
132513..132515,132615..132623,132627..132629,
132633..132635,132639..132641))
/locus_tag="Halhy_0120"
/note="FeS/SAM binding site; other site"
/db_xref="CDD:100105"
gene complement(133098..133454)
/locus_tag="Halhy_0121"
/db_xref="GeneID:10584272"
CDS complement(133098..133454)
/locus_tag="Halhy_0121"
/note="KEGG: gliding motility protein gldc;
SPTR: Gliding motility protein GldC;
IMG reference gene:2504769471;
TIGRFAM: gliding motility-associated protein GldC"
/codon_start=1
/transl_table=11
/product="gliding motility protein GldC"
/protein_id="YP_004444907.1"
/db_xref="GI:332662119"
/db_xref="GeneID:10584272"
/translation="MDQVATEKEIRIKVGLDDKNMPVRINWDADDNPSGMETQDSKAM
MISLFDREHLETIKIDLWVKDMQVGEMDRFFFQTLRGMADTYFRATQNSDLARDMQKF
VQYFGEQTQIISKDQP"
misc_feature complement(133119..133430)
/locus_tag="Halhy_0121"
/note="gliding motility-associated protein GldC; Region:
GldC; TIGR03515"
/db_xref="CDD:132554"
gene 133732..133807
/locus_tag="Halhy_R0002"
/db_xref="GeneID:10584273"
tRNA 133732..133807
/locus_tag="Halhy_R0002"
/product="tRNA-Gly"
/note="IMG reference gene:2504769472"
/db_xref="GeneID:10584273"
gene 133934..134009
/locus_tag="Halhy_R0003"
/db_xref="GeneID:10584274"
tRNA 133934..134009
/locus_tag="Halhy_R0003"
/product="tRNA-Gly"
/note="IMG reference gene:2504769473"
/db_xref="GeneID:10584274"
gene 134459..135064
/locus_tag="Halhy_0122"
/db_xref="GeneID:10584275"
CDS 134459..135064
/locus_tag="Halhy_0122"
/note="KEGG: mtt:Ftrac_1196 hypothetical protein;
SPTR: uncharacterized protein;
IMG reference gene:2504769474"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444908.1"
/db_xref="GI:332662120"
/db_xref="GeneID:10584275"
/translation="MKKPILLFFFSLLVSFAFTQSTLFSPIHESRLDKQRKGMLVLGS
WALGNMALGAIRLGQTTGENRAFQQMQIGWGAVNLGIATLGYLGTMHTDYSSWDTYRS
VQEHYKIQKILLFNAGLDVGYMLGGAYLLERGQRDVKNAERLRGFGRSILIQGAFLFV
FDLSLHAILANDNPKLKSILSQSSIGFSPNQVQLHIALNKP"
gene 135109..135972
/locus_tag="Halhy_0123"
/db_xref="GeneID:10584276"
CDS 135109..135972
/locus_tag="Halhy_0123"
/note="COGs: COG2819 hydrolase of the alpha/beta
superfamily;
InterPro IPR000801;
KEGG: fba:FIC_01752 alpha-dextrin
endo-1,6-alpha-glucosidase;
PFAM: esterase;
SPTR: alpha-dextrin endo-1, 6-alpha-glucosidase;
IMG reference gene:2504769475;
PFAM: esterase"
/codon_start=1
/transl_table=11
/product="esterase"
/protein_id="YP_004444909.1"
/db_xref="GI:332662121"
/db_xref="InterPro:IPR000801"
/db_xref="GeneID:10584276"
/translation="MNILLLIILSTMSGITARNKKAFAQSLATPHHFQESTAAANVKI
LATDFEIPQLQRKRRIWVYLPLDYEQGKKRYPVLYMQDGQNLFDAKTSFAGEWRVDET
LNNLAQTQNKSCIVVGIDNGSEKRMGEYAPWDHPRFGKGEGVAYTKFMVETLKPYIDK
NFRTLKGPESTAVIGSSMGGLIAFYAALEYPEVFGRAGVFSPSFWHSEAAFEFAKTKG
PEAKKLKIYMFTGALEGKAEMVAPMERMAKILKEAGFTKRRLYTALPKDGNHSEAFWA
REFEGAYSWLF"
misc_feature 135214..135966
/locus_tag="Halhy_0123"
/note="Predicted hydrolase of the alpha/beta superfamily
[General function prediction only]; Region: COG2819"
/db_xref="CDD:32647"
misc_feature 135268..135966
/locus_tag="Halhy_0123"
/note="Putative esterase; Region: Esterase; pfam00756"
/db_xref="CDD:201428"
gene complement(135980..137332)
/locus_tag="Halhy_0124"
/db_xref="GeneID:10584277"
CDS complement(135980..137332)
/locus_tag="Halhy_0124"
/note="KEGG: dfe:Dfer_4143 Mn2+ and Fe2+ transporters of
the NRAMP family-like protein;
SPTR: Mn2+ and Fe2+ transporters of the NRAMP family-like
protein;
IMG reference gene:2504769476"
/codon_start=1
/transl_table=11
/product="Mn2+ and Fe2+ transporters of the NRAMP
family-like protein"
/protein_id="YP_004444910.1"
/db_xref="GI:332662122"
/db_xref="InterPro:IPR001046"
/db_xref="GeneID:10584277"
/translation="MSDPYLLRVDAIQEPPVSFAQRLKHLGPGFILSAAIVGSGELIA
TTALGAKAGFVAFWVIILSCLVKVAVQVQFAKHTILTGQTAMQTLDMLPGPRIGKARW
TVVLYFLIMLIKLIQMGGIIGGVALVMYMMLPQVSVATWALIMAPLTSLLVYRGYYGF
IEKTSLILITGFTLFAIAAVFFLQYTPYALSWNQLATGLSFSLPASAVIYAFGAFGIT
GIGGEEIIYYNYWCLEKGYAAHTGPRDDSAEWEARARGWIQVMNTDAICSMVLYTTVT
AAFFILGAAILHTRQVVPEGYQLLEVLSSIFTESLGPWARVFFMVGAFFVLYSTLFSA
LAGWGRLFSDMFSQFGWIDFYDVKQRQRSIAILSWIFPLIWAALFIFIKLPLIMVLSG
GIAGSVLLIMVVYATWYFRYRCSTGKFDVSWPSDVLFWISILAILGVGVYGVYQVFLG
"
misc_feature complement(135983..137302)
/locus_tag="Halhy_0124"
/note="Mn2+ and Fe2+ transporters of the NRAMP family
[Inorganic ion transport and metabolism]; Region: MntH;
COG1914"
/db_xref="CDD:32098"
misc_feature complement(<136736..137281)
/locus_tag="Halhy_0124"
/note="manganese transport protein MntH; Reviewed; Region:
PRK00701; cl15845"
/db_xref="CDD:210245"
gene 137379..137882
/locus_tag="Halhy_0125"
/db_xref="GeneID:10584278"
CDS 137379..137882
/locus_tag="Halhy_0125"
/note="COGs: COG0652 Peptidyl-prolyl cis-trans isomerase
(rotamase) - cyclophilin family;
InterPro IPR002130;
KEGG: ppiA; peptidyl-prolyl cis-trans isomerase A;
PFAM: Peptidyl-prolyl cis-trans isomerase,
cyclophilin-type;
SPTR: Peptidylprolyl isomerase;
IMG reference gene:2504769477;
PFAM: Cyclophilin type peptidyl-prolyl cis-trans
isomerase/CLD"
/codon_start=1
/transl_table=11
/product="cyclophilin type peptidyl-prolyl cis-trans
isomerase"
/protein_id="YP_004444911.1"
/db_xref="GI:332662123"
/db_xref="InterPro:IPR002130"
/db_xref="InterPro:IPR015891"
/db_xref="GeneID:10584278"
/translation="MFAKNIRFMQQWSTPPAMQIDTTKSYVATLSTDKGDIVIQLFPE
HAPKTVNNFVFLASQGFYDGITFHRVISNFMIQGGDPTGTGRGGAGYKFADEFAGNPL
THTAGALSMANAGPNSNGSQFFITHSPQPHLNGKHTVFGQVKEGQEVVDTIRQGDKIV
KVSIVEG"
misc_feature 137463..137849
/locus_tag="Halhy_0125"
/note="cyclophilin: cyclophilin-type peptidylprolyl cis-
trans isomerases. This family contains eukaryotic,
bacterial and archeal proteins which exhibit a
peptidylprolyl cis- trans isomerases activity (PPIase,
Rotamase) and in addition bind the...; Region:
cyclophilin; cd00317"
/db_xref="CDD:29390"
misc_feature order(137583..137585,137589..137591,137598..137603,
137607..137609,137712..137717,137742..137744,
137748..137750,137772..137777,137787..137789)
/locus_tag="Halhy_0125"
/note="active site"
/db_xref="CDD:29390"
gene complement(137986..138678)
/locus_tag="Halhy_0126"
/db_xref="GeneID:10584279"
CDS complement(137986..138678)
/locus_tag="Halhy_0126"
/note="COGs: COG3279 Response regulator of the LytR/AlgR
family;
InterPro IPR001789:IPR007492;
KEGG: sli:Slin_0421 two component transcriptional
regulator, LytTR family;
PFAM: Signal transduction response regulator, receiver
region; LytTr DNA-binding region;
SMART: Signal transduction response regulator, receiver
region;
SPTR: Two component transcriptional regulator, LytTR
family;
IMG reference gene:2504769478;
PFAM: Response regulator receiver domain; LytTr
DNA-binding domain"
/codon_start=1
/transl_table=11
/product="LytTR family two component transcriptional
regulator"
/protein_id="YP_004444912.1"
/db_xref="GI:332662124"
/db_xref="InterPro:IPR001789"
/db_xref="InterPro:IPR007492"
/db_xref="InterPro:IPR011006"
/db_xref="GeneID:10584279"
/translation="MINAIAIDDEPSALEVLERYAAKVPFVQLKKVFYSTADALAYLH
AEPIQLIFLDIQMPDMLGTDFARLIQLEKVQVIFTTAHAEFALEGFDLKALDYLLKPF
GFGRFLQACNRVLELVANKPNEEESSIFVKEGYDWVRVNLDEVLYIQSDTNLLFIHEH
QRRITTRMTVAEMLSILPPERFVRVHKSYIVALEAVQKIEKHQLTLGKHTVPLAAAYR
DAVEERLLRKKK"
misc_feature complement(138004..138678)
/locus_tag="Halhy_0126"
/note="Response regulator of the LytR/AlgR family
[Transcription / Signal transduction mechanisms]; Region:
LytT; COG3279"
/db_xref="CDD:33090"
misc_feature complement(138334..138660)
/locus_tag="Halhy_0126"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature complement(order(138376..138381,138388..138390,
138439..138441,138493..138495,138517..138519,
138652..138657))
/locus_tag="Halhy_0126"
/note="active site"
/db_xref="CDD:29071"
misc_feature complement(138517..138519)
/locus_tag="Halhy_0126"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature complement(order(138493..138501,138505..138510))
/locus_tag="Halhy_0126"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature complement(138373..138381)
/locus_tag="Halhy_0126"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
misc_feature complement(138007..138267)
/locus_tag="Halhy_0126"
/note="LytTr DNA-binding domain; Region: LytTR;
smart00850"
/db_xref="CDD:197918"
gene complement(138675..139724)
/locus_tag="Halhy_0127"
/db_xref="GeneID:10584280"
CDS complement(138675..139724)
/locus_tag="Halhy_0127"
/note="COGs: COG3275 regulator of cell autolysis;
InterPro IPR010559;
KEGG: sli:Slin_0422 signal transduction histidine kinase,
LytS;
PFAM: Signal transduction histidine kinase, internal
region;
SPTR: Signal transduction histidine kinase, LytS;
IMG reference gene:2504769479;
PFAM: Histidine kinase"
/codon_start=1
/transl_table=11
/product="signal transduction histidine kinase"
/protein_id="YP_004444913.1"
/db_xref="GI:332662125"
/db_xref="InterPro:IPR010559"
/db_xref="GeneID:10584280"
/translation="MKEYCKIALGLFSALFITLVLGYLSWRFLQVFIAEFDQDSVAIY
RLMRYLLGVLIELFLVWGIAHLNFRLVFLKFFSHNASSIRGLYWVWIALLALLWFALL
EWRTFYEPNYADENVLLTFLLTAFVIGYAYSADYFRTRRLQLTLLKEKKEAELNVLKA
QIKPHFLFNTLNIIYNSAQKHDDEETAQLILELSQLLRFSIQEATQAYTSLQSEVSFL
ERYIHFQRLRLPQKSNVDIQIKLEGAFNEGQIAPLLLIPFVENAFQYGVSMNEPCFIH
VDLMVQNKLLSLHVRNSISPNASAKSGLGTGIHNTRERLALLYPQRHSLHIQADEKVF
QVELTLDLSPENPTP"
misc_feature complement(139014..139247)
/locus_tag="Halhy_0127"
/note="Histidine kinase; Region: His_kinase; pfam06580"
/db_xref="CDD:203479"
gene complement(139726..140121)
/locus_tag="Halhy_0128"
/db_xref="GeneID:10584281"
CDS complement(139726..140121)
/locus_tag="Halhy_0128"
/note="KEGG: sli:Slin_0423 hypothetical protein;
SPTR: uncharacterized protein;
IMG reference gene:2504769480;
PFAM: Protein of unknown function (DUF2846)"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444914.1"
/db_xref="GI:332662126"
/db_xref="InterPro:IPR022548"
/db_xref="GeneID:10584281"
/translation="MLKYSFFVGLLLLFSAGENAEKATFVLYRGREFLGHAYEIKFNN
HLVATIETNSFIEVVITPGKINIEASAFRGTKKTLTVTAEAGQVYFVKAYEEIDFWDH
YLVMHLMDAEKAKKEVKKCLEIKVAKQPD"
misc_feature complement(139819..>140058)
/locus_tag="Halhy_0128"
/note="Protein of unknown function (DUF2846); Region:
DUF2846; pfam11008"
/db_xref="CDD:151455"
gene complement(140126..140830)
/locus_tag="Halhy_0129"
/db_xref="GeneID:10584282"
CDS complement(140126..140830)
/locus_tag="Halhy_0129"
/note="KEGG: sli:Slin_0424 hypothetical protein;
SPTR: uncharacterized protein;
IMG reference gene:2504769481"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444915.1"
/db_xref="GI:332662127"
/db_xref="GeneID:10584282"
/translation="MKKLLCLTGFLLLTFSSLKAQVDSIQSIPLEIKKGSFARIGFFG
STFNCIWMNHMHSFLKKNDFEGLFNNPFTIPFEGGFRLNNWFAGFKIEVPTYDFERLE
NKLNIRALFVERSVIKTRNYRFNVGLGVSQFDYSIAFTQKEPTRQVDFDDLLYSNFNT
SPRLRNTGGAYDFFISYMHREKRKIAIADYVRVGYRKGFKAYSWKTDYFQLLDAPMDQ
LDMVYFQYMISISRNK"
gene 141053..142192
/locus_tag="Halhy_0130"
/db_xref="GeneID:10584283"
CDS 141053..142192
/locus_tag="Halhy_0130"
/note="KEGG: mtt:Ftrac_1450 phospholipid/glycerol
acyltransferase;
SPTR: Phospholipid/glycerol acyltransferase;
IMG reference gene:2504769482;
PFAM: Acyltransferase"
/codon_start=1
/transl_table=11
/product="phospholipid/glycerol acyltransferase"
/protein_id="YP_004444916.1"
/db_xref="GI:332662128"
/db_xref="InterPro:IPR002123"
/db_xref="GeneID:10584283"
/translation="MQETPFRLEPFRDDEIEAAIDELFSYPGFLDGMKLFLPEPLLQH
ILQAKEEIHTAADFQTKIVAPFLKVIQKASISELSASGFEHLNPNERYLFISNHRDIV
LDSAFLNMVLFENGFDTSQIAIGDNLMMHRISELLFRINKSFVVKRTGTPRELYGYSM
QLSTYIHDLINNKIASVWIAQREGRAKDGNDRTQVGLLTMLGLSGKKHLVQHFQKLNI
VPVSISYEYDPCGLLKTQEYLNKLADPDFKKNFQQDVEYMLLGIKGQKGRVHFHFGEV
LNDTLEELKEESNSKKQLETLAEMIDKSVHLHYELRPVNYIAYDLLNESRTYIQHYTL
EELEWHTHFFEDQIKLLKNDADDDAGRKYLLEMYANPLINANSYV"
misc_feature 141329..141877
/locus_tag="Halhy_0130"
/note="N-Acyltransferase superfamily: Various enyzmes that
characteristicly catalyze the transfer of an acyl group to
a substrate; Region: NAT_SF; cl00357"
/db_xref="CDD:213096"
misc_feature order(141344..141346,141356..141358,141362..141364,
141425..141436,141599..141607)
/locus_tag="Halhy_0130"
/note="putative acyl-acceptor binding pocket; other site"
/db_xref="CDD:153244"
gene complement(142324..142764)
/locus_tag="Halhy_0131"
/db_xref="GeneID:10584284"
CDS complement(142324..142764)
/locus_tag="Halhy_0131"
/note="COGs: COG4232 Thiol:disulfide interchange protein;
InterPro IPR013766:IPR004879:IPR000866;
KEGG: sli:Slin_4066 thioredoxin domain protein;
SPTR: disulphide-isomerase;
IMG reference gene:2504769483;
PFAM: Thioredoxin"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444917.1"
/db_xref="GI:332662129"
/db_xref="InterPro:IPR005746"
/db_xref="InterPro:IPR012335"
/db_xref="InterPro:IPR012336"
/db_xref="InterPro:IPR013766"
/db_xref="InterPro:IPR017936"
/db_xref="InterPro:IPR017937"
/db_xref="GeneID:10584284"
/translation="MRILVSSLFVLFLCGSCKYQIALSPPWQKTPHNGVVAFQTAAFQ
AKLDSARLNKRPVFLDFYTSWCGPCKLMDRETFTDQDVANLLNKEFISLKINAEKGEG
IALAKAYDVEVYPTLVFIDKDGEVVKREGLHSAGKFIKAAKRAL"
misc_feature complement(142342..142617)
/locus_tag="Halhy_0131"
/note="Thioredoxin-like domain; Region: Thioredoxin_2;
pfam13098"
/db_xref="CDD:205279"
gene 142872..145229
/locus_tag="Halhy_0132"
/db_xref="GeneID:10584285"
CDS 142872..145229
/locus_tag="Halhy_0132"
/note="COGs: COG5373 membrane protein;
InterPro IPR019286;
KEGG: hypothetical protein;
PFAM: Protein of unknown function DUF2339, transmembrane;
SPTR: Conserved hypothetical transmembrane protein;
IMG reference gene:2504769484;
PFAM: Predicted membrane protein (DUF2339)"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444918.1"
/db_xref="GI:332662130"
/db_xref="InterPro:IPR019286"
/db_xref="GeneID:10584285"
/translation="MADNQHTLQQLLEKLNALLQKQESFAKEIEALRTEIEALKRNPG
NKETYQANLSSHIIPPSPVPKIHRSVPAIDDPVVTETNSTQQKTDAKPLVDFNLESFI
GENLSNKIGIIIIVLGVGIGLKYAIDHHLISPLFRIILSYLAGLTLMGFAIRFKNKYV
EYSAVLLSGAMCILYFTTYAAYSFFHLFSFPVAFSTMCLFTVFTVLAAMYYNRSIIAL
LGLVGAYAVPFLLGFHPNQYTFLFSYIAVINLGILALAVSRDWWVLKLVTFAWTWVIF
IYWYAVYYFRQDDFGLFWFFLLVFFCTFYATILANTLVKRGKFGALNIFLLLFNSIAF
FWMGYAACIPHPLAQHLLGLLTLGNALIHFIVGYNLYQQNPDEKGNHRFILAMGLAFF
TLAIPIQFDAPWVSILWVLEAGFLFGMGRIKAWSFWEKTAYVLMGLACISMAQDWLYL
YNTYSSKSPETRIPLFLNSIFLSSLMFCGSLGFINSLQHHKLYRSPWQHDQDKNELLS
FLLATALILGIYFTFFCEISTYWSQAYKDTYSQHRAPGQTLPIIYSRLDLERFRGVWL
INYTLFFVSVLALVNLQKIKSAALGVVSVGLNIAVLLLFLTLGLTLLHQLQDSYLNQA
VHSYFYHGPFNLGIRYVSLGFLALLLVTGGLLLRKSGLSKDLVVAYELCIYGAVIWWC
SDELILWMSKLNVDKAYKLSLSILWGSYALFMVVMGIWKRKPHLRISAIFLFSITLLK
LFLYDIAHLNTIPKTIIFIALGILLLIVSFLYIKYKDWIEQDLLK"
misc_feature 143175..>144224
/locus_tag="Halhy_0132"
/note="Predicted membrane protein (DUF2339); Region:
DUF2339; pfam10101"
/db_xref="CDD:150741"
gene complement(145232..145918)
/locus_tag="Halhy_0133"
/db_xref="GeneID:10584286"
CDS complement(145232..145918)
/locus_tag="Halhy_0133"
/note="COGs: COG2884 ATPase involved in cell division;
InterPro IPR003593:IPR003439;
KEGG: ran:Riean_1007 ABC transporter related protein;
PFAM: ABC transporter-like;
PRIAM: Phosphonate-transporting ATPase;
SMART: ATPase, AAA+ type, core;
SPTR: ABC transporter related protein;
IMG reference gene:2504769485;
PFAM: ABC transporter"
/codon_start=1
/transl_table=11
/product="phosphonate-transporting ATPase"
/protein_id="YP_004444919.1"
/db_xref="GI:332662131"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR017871"
/db_xref="GeneID:10584286"
/translation="MSKLIVRLQDVVIKQGDQEVLGGVNLRVNEGEFTYLIGKTGSGK
SSLLKALYGALPLVQGQGEVAGFDLNQLNRNTIPLLRRKLGIVFQDFNLLNDRSVYNN
LLFTLKATGWSKRQEIQARIDEVLQQVGLAGQGPKMPHQLSGGEQQRVVIARALLNTP
ALIIADEPTGNLDPETSDEILLLMRHLSKQNNAAVLFATHDYRILENFPARIIRCLNG
KIFDDQEISL"
misc_feature complement(145262..145876)
/locus_tag="Halhy_0133"
/note="cell division ATP-binding protein FtsE; Region:
FtsE; TIGR02673"
/db_xref="CDD:131721"
misc_feature complement(145259..145858)
/locus_tag="Halhy_0133"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:213113"
misc_feature complement(145784..145807)
/locus_tag="Halhy_0133"
/note="Walker A/P-loop; other site"
/db_xref="CDD:72971"
misc_feature complement(order(145319..145321,145418..145423,
145652..145654,145781..145789,145793..145798))
/locus_tag="Halhy_0133"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:72971"
misc_feature complement(145652..145663)
/locus_tag="Halhy_0133"
/note="Q-loop/lid; other site"
/db_xref="CDD:72971"
misc_feature complement(145466..145495)
/locus_tag="Halhy_0133"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:72971"
misc_feature complement(145418..145435)
/locus_tag="Halhy_0133"
/note="Walker B; other site"
/db_xref="CDD:72971"
misc_feature complement(145400..145411)
/locus_tag="Halhy_0133"
/note="D-loop; other site"
/db_xref="CDD:72971"
misc_feature complement(145313..145333)
/locus_tag="Halhy_0133"
/note="H-loop/switch region; other site"
/db_xref="CDD:72971"
gene 146158..146556
/locus_tag="Halhy_0134"
/db_xref="GeneID:10584287"
CDS 146158..146556
/locus_tag="Halhy_0134"
/note="KEGG: cpi:Cpin_3077 hypothetical protein;
SPTR: uncharacterized protein;
IMG reference gene:2504769486;
PFAM: CcmE"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444920.1"
/db_xref="GI:332662132"
/db_xref="InterPro:IPR004329"
/db_xref="InterPro:IPR012340"
/db_xref="GeneID:10584287"
/translation="MKRIYLIAGVMVAIAIALLVNSAKDMSTYGSFADANTSSKKIKI
AGKLAKNKPMVYDPVKDPNHFSFFIKDSAGEEHKVVLLKAKPQDFEMSEQIVVTGRMK
DGVFVATDLLMKCPSKYKDEEIAIKSKQNG"
misc_feature 146161..146553
/locus_tag="Halhy_0134"
/note="CcmE; Region: CcmE; cl00994"
/db_xref="CDD:186292"
gene 146558..149434
/locus_tag="Halhy_0135"
/db_xref="GeneID:10584288"
CDS 146558..149434
/locus_tag="Halhy_0135"
/note="COGs: COG1138 Cytochrome c biogenesis factor;
InterPro IPR002541;
KEGG: cpi:Cpin_3078 cytochrome c assembly protein;
PFAM: Cytochrome c assembly protein;
SPTR: Cytochrome c assembly protein;
IMG reference gene:2504769487;
PFAM: Cytochrome C assembly protein"
/codon_start=1
/transl_table=11
/product="cytochrome c assembly protein"
/protein_id="YP_004444921.1"
/db_xref="GI:332662133"
/db_xref="InterPro:IPR002541"
/db_xref="InterPro:IPR003567"
/db_xref="GeneID:10584288"
/translation="MEKIQYIGETLLPGQIGQLGVLLGFVGALLSMVAYWFATQRQET
LEYEGWRKIGRIAFLAHGVGIFAVIGSLLYAMTHQLYEYQYVQGHVSEELPMKFIFSA
LWEGQEGSFLLWMFWHIVLGCILLVKGKSWETSTLTVLAAIQAVLGSMILGVYLGFGD
EASKIGSNPMLLLRQTIDAPIFAQADYVKLIKGNGLSPALQNYWMTIHPPTLFLGFAS
TAIPFAYAIAGLWTKRHTEWLKPALPWALFCGSILGTGILMGSAWAYEALNFGGYWAW
DPVENTSLVPWLIIIAGVHTNLISKATGHSVRSSYIFYLLSFLLVVYSTFLTRSGVLG
ETSVHAFTGSGLGNQLIFFIAAFTLPSLIMMIWRWRQIPSPKTEEATTSKEFWMFIGT
LILLFSAVLITGSTSLPVFNKIVQYFNPAYQGRVITEPVIHFNKYQLWIGVFIGYFSG
FAQYLRFREHNWSKNAQRFAIHVGAALAIAGVLTYLSSLLIQLPTWQYVLLTFSGYFT
IVTNLDYLINYLKGNLKAAGSVFAHIGFGLMLVGIMASGVNRKIISSNAFLMDGLIEG
GDEEMSKKNISLFKNVPTLMQDYMVTYVKDTLVDFTRTYTVNYQRKNKAGKVIEDFNL
YPTILYEKTFTKIATSNPDTRHYWTKDVFTHISALPEVEQNFELKKQREEELKYQPLE
LAQGRTVLLLDTLEVENRDTVFTRTFQISLESISRNPAHKDYKPEPGDLAFSTKLKIR
RSDDDSVYYANPAILLRGQLIYTYPDQIDDLSSKFKISQEAIEKVFAFDNQLKYEDLN
LRQGDVGTWQDLKISFTGFNKNPEHPDYTRKEGDLAVGAMLDISAPDGKVYHAEPIFL
IRDGQPLNVKVEVGELGLHLRFPLLNPGNETIQLMLAKSSAPSSIPIEVATDALPSNY
IVLEAMEFPGINVFWLGTLLMMFGLGFSIWNRMSTRRTAEVAAA"
misc_feature 146702..>148198
/locus_tag="Halhy_0135"
/note="Cytochrome C assembly protein; Region:
Cytochrom_C_asm; cl00504"
/db_xref="CDD:212230"
gene 149601..150368
/locus_tag="Halhy_0136"
/db_xref="GeneID:10584289"
CDS 149601..150368
/locus_tag="Halhy_0136"
/note="InterPro IPR004455:IPR018931;
KEGG: acd:AOLE_13460 NADP oxidoreductase coenzyme
F420-dependent family protein;
PFAM: Domain of unknown function DUF2520; NADP
oxidoreductase, coenzyme F420-dependent;
SPTR: uncharacterized protein;
IMG reference gene:2504769488;
PFAM: NADP oxidoreductase coenzyme F420-dependent; Domain
of unknown function (DUF2520)"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444922.1"
/db_xref="GI:332662134"
/db_xref="InterPro:IPR004455"
/db_xref="InterPro:IPR016040"
/db_xref="InterPro:IPR018931"
/db_xref="GeneID:10584289"
/translation="MTINIIGSGKVAFHLSKRLHACGLTIRQIYSRQLDPALQLATAI
NAQGISRWKDVQADGVDLIIIAVSDQAIPEVAKALAKHLPNPPLVVHTSGSSPLHWLS
DVLPRTGIFYPLQSFSWGREPNFAEIPMCIEAQHPADEKLLLELGQRISQKVQLTTEA
DRKTLHLAAVFVNNFVNELYQIGAAILAEKQLPFDLLLPLIQETAAKVQAQAPAEMQT
GPALRGDLATIERQLDLLEAHPEWRELYGLMTGLIRG"
misc_feature 149604..149879
/locus_tag="Halhy_0136"
/note="NADP oxidoreductase coenzyme F420-dependent;
Region: F420_oxidored; pfam03807"
/db_xref="CDD:202773"
misc_feature 149979..150350
/locus_tag="Halhy_0136"
/note="Domain of unknown function (DUF2520); Region:
DUF2520; pfam10728"
/db_xref="CDD:204549"
gene complement(150496..151893)
/locus_tag="Halhy_0137"
/db_xref="GeneID:10584290"
CDS complement(150496..151893)
/locus_tag="Halhy_0137"
/note="COGs: COG3344 Retron-type reverse transcriptase;
InterPro IPR000477:IPR013597;
KEGG: pth:PTH_2412 retron-type reverse transcriptase;
PFAM: RNA-directed DNA polymerase (reverse transcriptase);
Group II intron, maturase-specific;
SPTR: RNA-directed DNA polymerase (Reverse transcriptase);
IMG reference gene:2504769489;
PFAM: Group II intron, maturase-specific domain; Reverse
transcriptase (RNA-dependent DNA polymerase)"
/codon_start=1
/transl_table=11
/product="RNA-directed DNA polymerase"
/protein_id="YP_004444923.1"
/db_xref="GI:332662135"
/db_xref="InterPro:IPR000477"
/db_xref="InterPro:IPR013597"
/db_xref="InterPro:IPR015706"
/db_xref="GeneID:10584290"
/translation="MEDQSKLRNKYHQKDGAEGELPLFGKKKWEMSDAERVFSLQCKL
YQKAKQDKGYKFYVLYDKVFQKHMLSVAWKAVKANQGSPGIDGISINDIEQGGVENYL
EELGEELRTKRYRAQAVKRVMIPKANGGERPLGIPTVRDRIVQTACKLLIEPIFEADF
EESSYGFRPERSSGDALGAIKGYLQEGKSEVLDADLSKYFDTIPHDKLLIGLKERISD
GRILDLIGQWLKAPIYEDGQFKGGKKNKVGTPQGGVISPLLANIYLNLLDRIVNNPKS
LFYQGGVKIVRYADDFVLMGKQIGEQVKEQLKSLLSRMGLSLNEQKTRTVEAKAESFD
FLGFTIRYDKDLWDRNKRYWNIIPSQKSEQKIRDKIDTYLEAHGHYKGEQVSEDLNKL
LRGWLNYFDIKGVSYPAVSKRRLRHYLQERLNRYYNRKSQRKCRLYGQRAFEALVEKY
GLIDPTKYSSGGVRL"
misc_feature complement(150874..151536)
/locus_tag="Halhy_0137"
/note="RT_G2_intron: Reverse transcriptases (RTs) with
group II intron origin. RT transcribes DNA using RNA as
template. Proteins in this subfamily are found in
bacterial and mitochondrial group II introns. Their most
probable ancestor was a retrotransposable...; Region:
RT_G2_intron; cd01651"
/db_xref="CDD:73157"
misc_feature complement(150874..151524)
/locus_tag="Halhy_0137"
/note="Reverse transcriptase (RNA-dependent DNA
polymerase); Region: RVT_1; pfam00078"
/db_xref="CDD:200982"
misc_feature complement(order(150883..150888,151021..151026,
151030..151032,151138..151143,151294..151311))
/locus_tag="Halhy_0137"
/note="putative active site [active]"
/db_xref="CDD:73157"
misc_feature complement(order(151024..151026,151141..151143,
151294..151311))
/locus_tag="Halhy_0137"
/note="putative NTP binding site [chemical binding]; other
site"
/db_xref="CDD:73157"
misc_feature complement(151138..151140)
/locus_tag="Halhy_0137"
/note="putative nucleic acid binding site [nucleotide
binding]; other site"
/db_xref="CDD:73157"
misc_feature complement(150586..150804)
/locus_tag="Halhy_0137"
/note="Group II intron, maturase-specific domain; Region:
GIIM; pfam08388"
/db_xref="CDD:203926"
gene complement(152477..153910)
/locus_tag="Halhy_0138"
/db_xref="GeneID:10584291"
CDS complement(152477..153910)
/locus_tag="Halhy_0138"
/note="IMG reference gene:2504769490"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444924.1"
/db_xref="GI:332662136"
/db_xref="GeneID:10584291"
/translation="MLKRFFPLIVLLSNTLQAQNTIVAGKFPYQRNVPFSVEFISNQI
ILIDEWGKIADTSDANGHFKVSLQLDKPSIIRFSQNDFIELYLRPGDSLWVEMINARN
VSFAGTAAGENTLLMQVHNRPFIPLETAEDPLLFSQMIDTFYSAQMQGLAHYEADQPN
ADFVPLYLAKVYDRYLNDKIKIYNTLVREGLEGNLMDRLSRQIRSVPLVDEIRAEAYI
NTLHTLFTMETLKIMGQELEPQEIGQHTYPIGYTEVFQGHVKERLSAYPQLKQYFELQ
EIVYQIQMIKNVEQLADAASGLARLKKEEGYVSLYKLMQQTYRKKEIIYQLGKLPTAN
WLTPEGQVFQLNTSADQQTLVVFWDVNVPESVAALKYFQRESPIKPLGTMRYIWVQCG
GDKELWKRKIAEIPNTYSVQHCILEKPADLAALKPYFFRPELPISFTLSQDLTIKSMG
NKPSALLDEMWEVMSVGGRLIWKARRE"
gene complement(153941..154429)
/locus_tag="Halhy_0139"
/db_xref="GeneID:10584292"
CDS complement(153941..154429)
/locus_tag="Halhy_0139"
/note="InterPro IPR012867;
KEGG: mtt:Ftrac_3142 hypothetical protein;
PFAM: Protein of unknown function DUF1648;
SPTR: uncharacterized protein;
IMG reference gene:2504769491;
PFAM: Protein of unknown function (DUF1648)"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444925.1"
/db_xref="GI:332662137"
/db_xref="InterPro:IPR012867"
/db_xref="GeneID:10584292"
/translation="MFGQKTPFDYLIGFLALAFLLIQIILPVLYWDQLPERLPVHFNF
RGDPDRFGNKLSLFLLPAIGIGLFILLTVIGRNPQAMNHPVKISDENRDRVYRTGVQF
VHILRMLIGALFAYMLWGIIQVGLGGHYQLDIRVVYGFLGGTMLAMVWFFINVSKKDK
EA"
misc_feature complement(154232..>154348)
/locus_tag="Halhy_0139"
/note="Protein of unknown function (DUF1648); Region:
DUF1648; pfam07853"
/db_xref="CDD:203782"
gene complement(154469..155329)
/locus_tag="Halhy_0140"
/db_xref="GeneID:10584293"
CDS complement(154469..155329)
/locus_tag="Halhy_0140"
/note="KEGG: ppn:Palpr_1115 hypothetical protein;
SPTR: outer membrane protein;
IMG reference gene:2504769492"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444926.1"
/db_xref="GI:332662138"
/db_xref="InterPro:IPR008969"
/db_xref="InterPro:IPR014766"
/db_xref="GeneID:10584293"
/translation="MKKILSSLLCFCSFLILNAQDVVKGIILDQSKNAIPYVNIGVLN
TTIGTVSNENGRFELVVDKINPGDTVKISAIGFSSRVFQLQNLRKLLENNTELTLEAI
KYDLAEVTIKPLTFEEFGFERTSSNRNVNFSISSFPRQNLGGEIARKFKMKKYIQRSK
SKTCRIDALKFYLAYCDYDWAKLRVMAYRLDKGQPGETLLNENVIVEVKKGQTGWIEV
NLKPYDLIVDEDVAIGLEWIDHAPAGRRLSLPIVFPAVGSTHFYQFGSQNAWRKFPNM
STPMVIKVAY"
misc_feature complement(<155069..155263)
/locus_tag="Halhy_0140"
/note="Cna protein B-type domain; Region: Cna_B_2;
pfam13715"
/db_xref="CDD:205890"
gene 155405..156721
/locus_tag="Halhy_0141"
/db_xref="GeneID:10584294"
CDS 155405..156721
/locus_tag="Halhy_0141"
/note="COGs: COG3000 Sterol desaturase;
InterPro IPR006694;
KEGG: fjo:Fjoh_3509 sterol desaturase-like protein;
PFAM: Fatty acid hydroxylase;
SPTR: Sterol desaturase-like protein;
IMG reference gene:2504769493;
PFAM: Fatty acid hydroxylase superfamily"
/codon_start=1
/transl_table=11
/product="fatty acid hydroxylase"
/protein_id="YP_004444927.1"
/db_xref="GI:332662139"
/db_xref="InterPro:IPR006694"
/db_xref="GeneID:10584294"
/translation="MFFIAYKDFLYINQIAMEAYGAILNIVMPIFVLLFLVEKVVEWY
RGAQVIRGLDSVSSFSSGITNVVKDVLGVGISVITYEWLVQRVALTHMPANSIWAFAI
GFLVVDFQGYWVHRWSHEINFLWNRHIIHHSSEEFNLSCALRQSVSSFINYFTILLLP
AALLGVPTMVVAVIGPLHLFLQYWYHTQLINKMGVLEYILVTPSHHRVHHAMNKEYLD
KNYGQIFIFWDKWFGSFQEELPEVKPVYGVTRPVRTWNPIKINFQHLWLLMQDAWRTR
NWWDKVRVWFMPTGWRPADVVEKYPVDSIKDVYHFEKYDTKASRALIAWSWVQMFFNY
FLLAYFFANLVNIGSPGIFYYGGFLFLAIFAYTELMDRNPYAVYFETIKSALGLYLIY
QSGGDWFGANQNWGAWMTYLVTAYFVLSVITTVFFVEKEIKLTVAN"
misc_feature <155693..156166
/locus_tag="Halhy_0141"
/note="Sterol desaturase [Lipid metabolism]; Region: ERG3;
COG3000"
/db_xref="CDD:32818"
misc_feature 155702..156037
/locus_tag="Halhy_0141"
/note="Fatty acid hydroxylase superfamily; Region:
FA_hydroxylase; pfam04116"
/db_xref="CDD:202893"
gene complement(156718..157689)
/locus_tag="Halhy_0142"
/db_xref="GeneID:10584295"
CDS complement(156718..157689)
/locus_tag="Halhy_0142"
/note="COGs: COG4977 Transcriptional regulator containing
an amidase domain and an AraC-type DNA-binding HTH domain;
InterPro IPR018060:IPR002818:IPR000005;
KEGG: chu:CHU_3787 transcriptional regulator;
PFAM: Helix-turn-helix, AraC type; ThiJ/PfpI;
SMART: Helix-turn-helix, AraC domain;
SPTR: Transcriptional regulator, AraC family protein;
manually curated;
IMG reference gene:2504769494;
PFAM: DJ-1/PfpI family; Bacterial regulatory
helix-turn-helix proteins, AraC family"
/codon_start=1
/transl_table=11
/product="AraC family transcriptional regulator"
/protein_id="YP_004444928.1"
/db_xref="GI:332662140"
/db_xref="InterPro:IPR000005"
/db_xref="InterPro:IPR002818"
/db_xref="InterPro:IPR009057"
/db_xref="InterPro:IPR012287"
/db_xref="InterPro:IPR018060"
/db_xref="GeneID:10584295"
/translation="MKQVSILVPESAVMEAVADPRYMFTAANQFLVSAGKAPLFEVQL
VGQNKEVRLHDGVFSVHADKVLEEVKRTDLVVIPALFGDMQQAIEKNQAIIPWIVQQH
QKGAEVASLCVGAFLLASTGLLDGKKCSTHWAFYNEFRETFPQVEVTDGSIITDEHGL
YSSGGANSYWNLLLYLLEKYTDRDTAILAAKYFAIDIDRNNQSAFAMFKGQKDHKDKE
IKQTQDFIEANYQDKISVDQLADSVAVSRRSFERRFKQATGNTVVEYLQRVKIEAAKR
SFESSRKNINEVMYAVGYTDTKAFRTVFKKLTGLTPIEYRNKYNKEV"
misc_feature complement(156742..157683)
/locus_tag="Halhy_0142"
/note="Transcriptional regulator containing an amidase
domain and an AraC-type DNA-binding HTH domain
[Transcription]; Region: COG4977"
/db_xref="CDD:34583"
misc_feature complement(157102..157680)
/locus_tag="Halhy_0142"
/note="AraC transcriptional regulators having a Type 1
glutamine amidotransferase (GATase1)-like domain; Region:
GATase1_AraC_2; cd03138"
/db_xref="CDD:153232"
misc_feature complement(157354..157356)
/locus_tag="Halhy_0142"
/note="conserved cys residue [active]"
/db_xref="CDD:153232"
misc_feature complement(156889..157014)
/locus_tag="Halhy_0142"
/note="Bacterial regulatory helix-turn-helix proteins,
AraC family; Region: HTH_AraC; pfam00165"
/db_xref="CDD:143933"
misc_feature complement(156739..156864)
/locus_tag="Halhy_0142"
/note="Bacterial regulatory helix-turn-helix proteins,
AraC family; Region: HTH_AraC; pfam00165"
/db_xref="CDD:143933"
gene 157802..158242
/locus_tag="Halhy_0143"
/db_xref="GeneID:10584296"
CDS 157802..158242
/locus_tag="Halhy_0143"
/note="COGs: COG2764 conserved hypothetical protein;
InterPro IPR004360;
KEGG: lpa:lpa_03561 protein conserved in bacteria;
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase;
SPTR: Glyoxalase/bleomycin resistance protein/dioxygenase;
IMG reference gene:2504769495;
PFAM: 3-demethylubiquinone-9 3-methyltransferase"
/codon_start=1
/transl_table=11
/product="glyoxalase/bleomycin resistance
protein/dioxygenase"
/protein_id="YP_004444929.1"
/db_xref="GI:332662141"
/db_xref="GeneID:10584296"
/translation="MNQLIIYLTFNGNCREAMSFYQACLGGELEFQTIGESPMAEQLP
EKIKDFILHATLRNEHLLLMGTDMVGEQGLVKGNAMSILIECQNEAEIQVYYQLLSRG
GRTTHPIESTFWGALFGGLTDKYGNNWLLHCAKNQRLTQVEAAN"
misc_feature 157811..158197
/locus_tag="Halhy_0143"
/note="Escherichia coli PhnB and similar proteins; the E.
coli phnB gene is found next to an operon involved in the
cleavage of carbon-phosphorus bonds in unactivated
alkylphosphonates; Region: PhnB_like; cd06588"
/db_xref="CDD:176658"
misc_feature order(157811..157828,157874..157876,157979..157984,
157991..157993,158039..158056,158060..158062,
158072..158074,158159..158161,158189..158191)
/locus_tag="Halhy_0143"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:176658"
misc_feature 157829..158188
/locus_tag="Halhy_0143"
/note="Glyoxalase/Bleomycin resistance protein/Dioxygenase
superfamily; Region: Glyoxalase; pfam00903"
/db_xref="CDD:201499"
gene 158287..159651
/locus_tag="Halhy_0144"
/db_xref="GeneID:10584297"
CDS 158287..159651
/locus_tag="Halhy_0144"
/note="COGs: COG2942 N-acyl-D-glucosamine 2-epimerase;
InterPro IPR010819;
KEGG: htu:Htur_4659 N-acylglucosamine 2-epimerase;
PFAM: N-acylglucosamine 2-epimerase;
SPTR: N-acylglucosamine 2-epimerase superfamily;
IMG reference gene:2504769496;
PFAM: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)"
/codon_start=1
/transl_table=11
/product="N-acylglucosamine 2-epimerase"
/protein_id="YP_004444930.1"
/db_xref="GI:332662142"
/db_xref="InterPro:IPR008928"
/db_xref="InterPro:IPR010819"
/db_xref="InterPro:IPR012341"
/db_xref="GeneID:10584297"
/translation="MLIKNYIIFCTFVVFLAQCKTPSSHTDAITSIERAKLADTLEHL
LKSNLVDTWYPAAIDTQYGGYLSTFNATFKPVGNQDKMIVSQARHLWNNAKASQHWPG
EKKYRDFARHGFVFLQEKMWDKEYGGFFWQVDRAGKPRGDSSKTAYGNAFGLYAVSAY
YLASKDPAALALAQKSFRWLEQHSHDPIHGGYYQHLSKTGTIQKRLSTTPSTSDLGYK
DQNSSIHLLEAFTELYQIWPDPLVKTRLEEMIYLIRDKIVNEKGNLVLFFQPDWTPVS
FRDSSRASILRHHALDHISWGHDIETAYLLMEASHVACWHNDTITWRIAKKMTDQCLI
LGWDDAKGGFYDEGYFFTPDKITVTQDTKNWWTQAEALNTLLIMSDLYPRDPLNYYAK
FKKQWAYINQYLIDHQNGEWYDSGLDKDPRSAQRNKGHIWKAGYHQYRTLENCILRLR
EKHK"
misc_feature 158386..159612
/locus_tag="Halhy_0144"
/note="N-acyl-D-glucosamine 2-epimerase [Carbohydrate
transport and metabolism]; Region: COG2942"
/db_xref="CDD:32765"
misc_feature 158431..159642
/locus_tag="Halhy_0144"
/note="AGE domain; N-acyl-D-glucosamine 2-epimerase
domain; Responsible for intermediate epimerization during
biosynthesis of N-acetylneuraminic acid. Catalytic
mechanism is believed to be via nucleotide elimination and
readdition and is ATP modulated. AGE is...; Region: AGE;
cl00183"
/db_xref="CDD:185813"
misc_feature order(158536..158538,158548..158550,158557..158559,
158728..158730,158740..158742,158749..158751,
158947..158949,158956..158961,158968..158970,
159178..159180,159187..159189,159196..159201,
159379..159384,159394..159396,159580..159582,
159592..159597,159604..159606)
/locus_tag="Halhy_0144"
/note="putative active cleft [active]"
/db_xref="CDD:29324"
misc_feature order(158575..158577,158617..158619,159625..159627,
159637..159639)
/locus_tag="Halhy_0144"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29324"
gene 159814..161259
/locus_tag="Halhy_0145"
/db_xref="GeneID:10584298"
CDS 159814..161259
/locus_tag="Halhy_0145"
/note="COGs: COG0621 2-methylthioadenine synthetase;
HAMAP: tRNA-i(6)A37 modification enzyme MiaB;
InterProIPR006638:IPR006463:IPR013848:IPR007197:IPR
002792:IPR005839;
KEGG: phe:Phep_0249 (dimethylallyl)adenosine tRNA
methylthiotransferase;
PFAM: Methylthiotransferase, N-terminal; Radical SAM;
Deoxyribonuclease/rho motif-related TRAM;
SMART: Elongator protein 3/MiaB/NifB;
SPTR: tRNA-i(6)A37 thiotransferase enzyme MiaB;
TIGRFAM: Methylthiotransferase; tRNA-i(6)A37 modification
enzyme MiaB;
IMG reference gene:2504769497;
PFAM: TRAM domain; Radical SAM superfamily;
Uncharacterized protein family UPF0004;
TIGRFAM: tRNA-N(6)-(isopentenyl)adenosine-37
thiotransferase enzyme MiaB; radical SAM
methylthiotransferase, MiaB/RimO family"
/codon_start=1
/transl_table=11
/product="(dimethylallyl)adenosine tRNA
methylthiotransferase"
/protein_id="YP_004444931.1"
/db_xref="GI:332662143"
/db_xref="InterPro:IPR002792"
/db_xref="InterPro:IPR005839"
/db_xref="InterPro:IPR006463"
/db_xref="InterPro:IPR007197"
/db_xref="InterPro:IPR013848"
/db_xref="InterPro:IPR020612"
/db_xref="GeneID:10584298"
/translation="MHLYNDNPTLLDVQHQMNEEQQGEVFYKNTPEQPDSEAGKHFYI
ESYGCQMNFSDSEIVASILAEVGFKPTRNLELADLILVNTCSIREKAEETVRKRLRIF
DAIKRQKPGTLVGVLGCMAERLKSKFLEEERLVDLVVGPDAYRDLPKLVATAEDGDKG
VNVFLSREETYADISPLRLDSKGVSAFISIMRGCDNMCSFCVVPFTRGRERSRDAFSI
LAEAQELYERGYREVTLLGQNVDSYKWTNPETETLVNFAHLLEMVALVAPDLRVRFST
SHPKDITNEVLHTIAKYPNICKYIHLPVQSGNSNVLERMNRTYDREWYMERIEAIRQI
IPDCAISSDIIAGFCSETEAEHQDTLSMIEFADYSMSYMFFYSERPGTLAARKYPDDI
TLEVKKRRLQEIINLQSQVSYRHNQRDVGKVYEVLIEGDSRKSEQDFCGRNSQNKMIV
FPKVPGYQPGQYINVLIKAASSATLIGEAKI"
misc_feature 159853..161250
/locus_tag="Halhy_0145"
/note="(dimethylallyl)adenosine tRNA
methylthiotransferase; Provisional; Region: PRK14329"
/db_xref="CDD:184626"
misc_feature 159937..160233
/locus_tag="Halhy_0145"
/note="Uncharacterized protein family UPF0004; Region:
UPF0004; pfam00919"
/db_xref="CDD:201505"
misc_feature 160375..161028
/locus_tag="Halhy_0145"
/note="Radical SAM superfamily. Enzymes of this family
generate radicals by combining a 4Fe-4S cluster and
S-adenosylmethionine (SAM) in close proximity. They are
characterized by a conserved CxxxCxxC motif, which
coordinates the conserved iron-sulfur cluster; Region:
Radical_SAM; cd01335"
/db_xref="CDD:100105"
misc_feature order(160393..160395,160399..160401,160405..160407,
160411..160419,160519..160521,160525..160527,
160558..160560,160636..160644,160714..160716,
160846..160848,160936..160941)
/locus_tag="Halhy_0145"
/note="FeS/SAM binding site; other site"
/db_xref="CDD:100105"
misc_feature 161062..161253
/locus_tag="Halhy_0145"
/note="TRAM domain; Region: TRAM; pfam01938"
/db_xref="CDD:110897"
gene 161275..162666
/locus_tag="Halhy_0146"
/db_xref="GeneID:10584299"
CDS 161275..162666
/locus_tag="Halhy_0146"
/note="COGs: COG2204 Response regulator containing
CheY-like receiver AAA-type ATPase and DNA-binding
domains;
InterPro IPR003593:IPR002078:IPR002197;
KEGG: cpi:Cpin_5917 sigma54 specific transcriptional
regulator, fis family;
PFAM: RNA polymerase sigma factor 54, interaction;
Helix-turn-helix, Fis-type;
SMART: ATPase, AAA+ type, core;
SPTR: Sigma54 specific transcriptional regulator, Fis
family;
IMG reference gene:2504769498;
PFAM: Bacterial regulatory protein, Fis family; Sigma-54
interaction domain"
/codon_start=1
/transl_table=11
/product="Fis family transcriptional regulator"
/protein_id="YP_004444932.1"
/db_xref="GI:332662144"
/db_xref="InterPro:IPR002078"
/db_xref="InterPro:IPR002197"
/db_xref="InterPro:IPR009057"
/db_xref="InterPro:IPR020441"
/db_xref="GeneID:10584299"
/translation="MGSKFEGSALRYLEPWNPRTFEPSHMDNLLSVKQRFGIIGHSPL
LDRALSTAVRVANTDLTVLITGESGVGKEVFSKIIHALSARKHNQFIAINCGAIPEGT
INSELFGHEKGSFTGATSERKGYFESYDGGTIFLDEIAEMPMDTQAYLLRILESGEFI
RVGSNKTVRTDVRIIAATNVDLEDRIKKGKFREDLYFRLNTVSITVPALRDRADDVYL
LFRKFASDFAERHRSATVQLDERAQMLIKTYTWPGNVRELKNVAERVSVLSEERVITA
EALMEIEPRISTRNLPALVGNGTDAPGNMQERDILYKFLFEMKQDLNDLKSLVFELIK
SNDLRVTDLRPFRSLEPPRSMMPSPESRFNYPSNKETVPLHNGLADEEDYAEDLNPQV
IIPQVMPEHKTAASSAFGSVEILDDNYRIEDHEKNLIQKALRKYKGRRKEAAKELGIS
ERTLYRKIKQYDL"
misc_feature 161401..161880
/locus_tag="Halhy_0146"
/note="The AAA+ (ATPases Associated with a wide variety of
cellular Activities) superfamily represents an ancient
group of ATPases belonging to the ASCE (for additional
strand, catalytic E) division of the P-loop NTPase fold.
The ASCE division also includes ABC; Region: AAA; cd00009"
/db_xref="CDD:99707"
misc_feature 161455..161871
/locus_tag="Halhy_0146"
/note="ATPases associated with a variety of cellular
activities; Region: AAA; smart00382"
/db_xref="CDD:197690"
misc_feature 161470..161493
/locus_tag="Halhy_0146"
/note="Walker A motif; other site"
/db_xref="CDD:99707"
misc_feature order(161473..161496,161683..161685,161809..161811)
/locus_tag="Halhy_0146"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:99707"
misc_feature 161671..161688
/locus_tag="Halhy_0146"
/note="Walker B motif; other site"
/db_xref="CDD:99707"
misc_feature 161866..161868
/locus_tag="Halhy_0146"
/note="arginine finger; other site"
/db_xref="CDD:99707"
misc_feature 162532..162657
/locus_tag="Halhy_0146"
/note="Bacterial regulatory protein, Fis family; Region:
HTH_8; pfam02954"
/db_xref="CDD:202485"
gene 162663..163184
/locus_tag="Halhy_0147"
/db_xref="GeneID:10584300"
CDS 162663..163184
/locus_tag="Halhy_0147"
/note="KEGG: coc:Coch_0313 hypothetical protein;
SPTR: uncharacterized protein;
IMG reference gene:2504769499"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444933.1"
/db_xref="GI:332662145"
/db_xref="GeneID:10584300"
/translation="MTSVSSIIHCHAFKFGVILFLFLLNACSIKFNPADTGELKSYYI
PQFINNADNTLPNLPIQLSEALKDKIRLQSTLKYTDEDPDIELRGTLVDFRITSEAPR
VGETTAINRLTITLAVEYFNNRTQKEVWKRNFSFFYNYPSDQDFSTVQEIAIRTISNQ
LMEDIFNAAFSDW"
misc_feature 162828..163163
/locus_tag="Halhy_0147"
/note="Lipopolysaccharide-assembly; Region: LptE;
pfam04390"
/db_xref="CDD:202995"
gene 163205..164398
/locus_tag="Halhy_0148"
/db_xref="GeneID:10584301"
CDS 163205..164398
/locus_tag="Halhy_0148"
/note="COGs: COG2865 transcriptional regulator protein;
InterPro IPR007421;
KEGG: aca:ACP_2163 ATPase, AAA family;
PFAM: ATPase associated with various cellular activities,
AAA-4;
SPTR: ATPase, AAA family;
IMG reference gene:2504769500;
PFAM: Divergent AAA domain"
/codon_start=1
/transl_table=11
/product="transcriptional regulator"
/protein_id="YP_004444934.1"
/db_xref="GI:332662146"
/db_xref="InterPro:IPR007421"
/db_xref="GeneID:10584301"
/translation="MLSQQELNDLLTDLESDRVERTVSVNNTDKFSEAICAFSNDFPN
HKQAGYLIIGVDDKNGKPTGLTVTDQLLKDLAAIRNNGQVLPQPSITIQKYSLHGGEV
AVVEVFPSPSPPVRYKGRVWIRNGPTKAIANEAEELRLSEKRTASAKTYDATPAFDSN
LGDLNLELFKTTYLPNSIDREILAANHRDIKQQLASLRLYDIVRDCPTHAGLLTLGNN
PAFFIPGSYVQYVRFAGKGLESEILNEERFSGDILSLMQQLDMFVRNNIEQRPVAITA
LKEEIVKEYPYRAIRELLNNAIMHRNYESNAPVKFYEFSDRIEIANPGGLYGAARPDN
FPHQNDYRNPIIAEAMKIMGYVNKFNRGIETAKQELAANGNPEPVFEYTLPLHFGVTI
YKKVL"
misc_feature 163247..163603
/locus_tag="Halhy_0148"
/note="Divergent AAA domain; Region: AAA_4; pfam04326"
/db_xref="CDD:202973"
misc_feature 164123..164380
/locus_tag="Halhy_0148"
/note="ATP-dependent DNA helicase recG C-terminal; Region:
HATPase_c_4; pfam13749"
/db_xref="CDD:205923"
gene 164398..165378
/locus_tag="Halhy_0149"
/db_xref="GeneID:10584302"
CDS 164398..165378
/locus_tag="Halhy_0149"
/note="COGs: COG1192 ATPase involved in chromosome
partitioning;
KEGG: cja:CJA_1579 phage-related regulatory protein CII;
SPTR: Phage-related regulatory protein cII;
IMG reference gene:2504769501;
PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain"
/codon_start=1
/transl_table=11
/product="phage-related regulatory protein CII"
/protein_id="YP_004444935.1"
/db_xref="GI:332662147"
/db_xref="InterPro:IPR002586"
/db_xref="GeneID:10584302"
/translation="MKSIAFFNNKGGVGKTTTVYHLAWMLSEMGHQVLAIDLDPQSNL
SSMFLSEDRMEEVVLDETYSYTVLDAILPLSEGEGYQPVHIEQISERISLLIGDLALS
AFEDKLSDAWNKCLAGDVFGFKVSSVFKTLIDDAVARSGASWVLIDVGPNLGAINRAV
LIATQFIAMPVASDLFSLQGIKNLGQTLQEWREQWKKRVNEYPPRSNKSNIPDGEMSP
IGYILMQYTARQSRPVKSYIRWAEKIPGVYQEFVLNEEPSPNTSIKDDPHCLAQLKHY
HSLAPMSMEAHKPMFLLKPADGAIGAHVQAVMRSYDDFLNLTEHIIAVCM"
misc_feature 164398..165195
/locus_tag="Halhy_0149"
/note="ATPases involved in chromosome partitioning [Cell
division and chromosome partitioning]; Region: Soj;
COG1192"
/db_xref="CDD:31385"
misc_feature 164407..>164520
/locus_tag="Halhy_0149"
/note="ParA and ParB of Caulobacter crescentus belong to a
conserved family of bacterial proteins implicated in
chromosome segregation. ParB binds to DNA sequences
adjacent to the origin of replication and localizes to
opposite cell poles shortly following the...; Region:
ParA; cd02042"
/db_xref="CDD:73302"
misc_feature 164425..164445
/locus_tag="Halhy_0149"
/note="P-loop; other site"
/db_xref="CDD:73302"
misc_feature 164443..164445
/locus_tag="Halhy_0149"
/note="Magnesium ion binding site [ion binding]; other
site"
/db_xref="CDD:73302"
misc_feature <164827..164988
/locus_tag="Halhy_0149"
/note="ParA and ParB of Caulobacter crescentus belong to a
conserved family of bacterial proteins implicated in
chromosome segregation. ParB binds to DNA sequences
adjacent to the origin of replication and localizes to
opposite cell poles shortly following the...; Region:
ParA; cd02042"
/db_xref="CDD:73302"
misc_feature 164839..164841
/locus_tag="Halhy_0149"
/note="Magnesium ion binding site [ion binding]; other
site"
/db_xref="CDD:73302"
gene 165414..165875
/locus_tag="Halhy_0150"
/db_xref="GeneID:10584303"
CDS 165414..165875
/locus_tag="Halhy_0150"
/note="InterPro IPR000182;
KEGG: rlg:Rleg_2038 GCN5-related N-acetyltransferase;
PFAM: GCN5-related N-acetyltransferase;
SPTR: GCN5-related N-acetyltransferase;
IMG reference gene:2504769502;
PFAM: Acetyltransferase (GNAT) family"
/codon_start=1
/transl_table=11
/product="N-acetyltransferase GCN5"
/protein_id="YP_004444936.1"
/db_xref="GI:332662148"
/db_xref="InterPro:IPR000182"
/db_xref="InterPro:IPR016181"
/db_xref="GeneID:10584303"
/translation="MPFTPITISPVSPADEQVQKLITKLDQFQIALYGRENCHLDSIE
VLLQSGAHMLGAFSGDILVGMGAIKIMDGYAEVKRMYVEELHRGMGIAENILGRLEAY
AMEQEVNRICLETGVYHEAAMRLYRKLGYRVIEQFGEYKVNGLSVFFEKQI"
misc_feature 165459..165806
/locus_tag="Halhy_0150"
/note="Acetyltransferase (GNAT) domain; Region:
Acetyltransf_10; pfam13673"
/db_xref="CDD:205850"
misc_feature 165570..165755
/locus_tag="Halhy_0150"
/note="N-Acyltransferase superfamily: Various enzymes that
characteristically catalyze the transfer of an acyl group
to a substrate; Region: NAT_SF; cd04301"
/db_xref="CDD:173926"
misc_feature order(165651..165659,165687..165692)
/locus_tag="Halhy_0150"
/note="Coenzyme A binding pocket [chemical binding]; other
site"
/db_xref="CDD:173926"
gene 165931..166665
/locus_tag="Halhy_0151"
/db_xref="GeneID:10584304"
CDS 165931..166665
/locus_tag="Halhy_0151"
/note="KEGG: cpi:Cpin_1130 hypothetical protein;
SPTR: uncharacterized protein;
IMG reference gene:2504769503"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444937.1"
/db_xref="GI:332662149"
/db_xref="InterPro:IPR008969"
/db_xref="InterPro:IPR014766"
/db_xref="GeneID:10584304"
/translation="MKRPKYFLSINTPCNQNWAAMENVEAGKYCQNCAKNVIDFTKLT
DREVVQIIEQSKGKLCGRFKAEQLDRDYSIAIPPRPKPWLYKLLAGLFFLGTATKGSA
LGFKPIQNKVAIYVHNIPSQFIQTSASDSIPPLSSNNLVKGKIIDVDTKESLTNVAVQ
IKGTTLGNVTDDQGNFSLAIPDEFLSRQLVLSISYLGYDTIELAVENKRFPFSFSKAI
TMTPSENGLTGEVCIVKKRWRPFKKN"
misc_feature 166351..166623
/locus_tag="Halhy_0151"
/note="Cna protein B-type domain; Region: Cna_B_2;
pfam13715"
/db_xref="CDD:205890"
gene 166730..168064
/locus_tag="Halhy_0152"
/db_xref="GeneID:10584305"
CDS 166730..168064
/locus_tag="Halhy_0152"
/note="COGs: COG0160 4-aminobutyrate aminotransferase and
related aminotransferase;
InterPro IPR005814;
KEGG: pjd:Pjdr2_0216 4-aminobutyrate aminotransferase;
PFAM: Aminotransferase class-III;
PRIAM: Acetylornithine transaminase;
SPTR: 4-aminobutyrate aminotransferase;
IMG reference gene:2504769504;
PFAM: Aminotransferase class-III"
/codon_start=1
/transl_table=11
/product="acetylornithine transaminase"
/protein_id="YP_004444938.1"
/db_xref="GI:332662150"
/db_xref="InterPro:IPR005814"
/db_xref="InterPro:IPR015421"
/db_xref="InterPro:IPR015422"
/db_xref="InterPro:IPR015424"
/db_xref="GeneID:10584305"
/translation="MSTPVNQGENIRSLRAETTSSDFTNELIARDSSVFFHQTLSSPV
FNVVTKAEGAYIYDGEGKKYLDLHGNGVHTAGYNNPQVIAAIQKQITESLTFAPRRFT
NLPAVALAEKLVEIAPEGLNRVLFCPGGSEAIEMAVMLAKLYTGKWKTLSYYGSFHGA
GFQAVSIGADAHFREGLGPMMPGAIHLELPDYYRNPWGWTDQQQIDDEYLRQLSTQIA
HNPEIAALITEPIFYNSTVPTRYYWEQVKAICKVQGILLIFDEIYTAFGRTGKMFAAE
HFIPPDIIVIGKGFGGGIVPFAGIIGREELNVLEHKSIGHYTHEKNPLCAAVAKAVID
YVETEQLVAHAQKLGQYFRSGLEALQHEFALIGNISGLGLNLAVDLVKDRQSKARATE
EAQQLMAFCMNRGISFKLIQGNILNLKPALVITQQEIDLVLETLREGLRALN"
misc_feature 166742..168058
/locus_tag="Halhy_0152"
/note="4-aminobutyrate aminotransferase; Provisional;
Region: PRK06082"
/db_xref="CDD:180390"
misc_feature 166808..168049
/locus_tag="Halhy_0152"
/note="Acetyl ornithine aminotransferase family. This
family belongs to pyridoxal phosphate (PLP)-dependent
aspartate aminotransferase superfamily (fold I). The major
groups in this CD correspond to ornithine
aminotransferase, acetylornithine aminotransferase;
Region: OAT_like; cd00610"
/db_xref="CDD:99735"
misc_feature order(167114..167122,167198..167203,167207..167209,
167414..167416,167507..167509,167513..167518,
167591..167593)
/locus_tag="Halhy_0152"
/note="inhibitor-cofactor binding pocket; inhibition site"
/db_xref="CDD:99735"
misc_feature order(167117..167122,167198..167203,167414..167416,
167507..167509,167516..167518,167591..167593)
/locus_tag="Halhy_0152"
/note="pyridoxal 5'-phosphate binding site [chemical
binding]; other site"
/db_xref="CDD:99735"
misc_feature 167591..167593
/locus_tag="Halhy_0152"
/note="catalytic residue [active]"
/db_xref="CDD:99735"
gene complement(168069..168575)
/locus_tag="Halhy_0153"
/db_xref="GeneID:10584306"
CDS complement(168069..168575)
/locus_tag="Halhy_0153"
/note="KEGG: dfe:Dfer_2902 hypothetical protein;
SPTR: uncharacterized protein;
IMG reference gene:2504769505"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444939.1"
/db_xref="GI:332662151"
/db_xref="GeneID:10584306"
/translation="MKNTMLPLILGLLLPACQQQTKPVDFEKEKAAIQAVIAKETESY
YKQDFEAWKSTYLESPAFRKYAYWEGFPEKVTFNNGFESLKQEKKSQFEADATLWKGS
TEERANENFRITPEMAWYTFEQFSYEKDTRKLLGKSLETRVLEKENGEWKIAYLGYHY
FPDTLLTK"
gene complement(168667..169722)
/locus_tag="Halhy_0154"
/db_xref="GeneID:10584307"
CDS complement(168667..169722)
/locus_tag="Halhy_0154"
/note="COGs: COG1231 Monoamine oxidase;
InterPro IPR002937;
KEGG: cpi:Cpin_6047 amine oxidase;
PFAM: Amine oxidase;
SPTR: oxidoreductase;
IMG reference gene:2504769506;
PFAM: Flavin containing amine oxidoreductase"
/codon_start=1
/transl_table=11
/product="amine oxidase"
/protein_id="YP_004444940.1"
/db_xref="GI:332662152"
/db_xref="InterPro:IPR002937"
/db_xref="GeneID:10584307"
/translation="MKNVIILGAGLTGLTLAYQLKKAGIAATLIEARNRSGGRIHTLC
NEGEAPLEMGATWLGEKHESLRALLNELELPVFEQYLQGYTFYEPISTSPPQVFLLPD
QAPNYRIADGSSALITKLLSQLDPAQVILGQRIQKVEYQDGVFVLESADRRFSCNLLI
STIPPKILVERLEFTPKLPPELVQKAQHTHTWMGESIKVAITYPRAFWREKNYSGSVF
SNVGPISELYDHSNVEQSLFALKGFMSAALHGATQEQRKALAIDQLAKYFGEVARAYT
TYFDCVWQHEPDTFAPYGGYILPHQHNGDPIFRANYFEGNFIIAGTETASVFPGYMDG
AVVSGMESAARVRNFFI"
misc_feature complement(169507..169671)
/locus_tag="Halhy_0154"
/note="NAD(P)-binding Rossmann-like domain; Region:
NAD_binding_8; pfam13450"
/db_xref="CDD:205628"
misc_feature complement(168682..>169656)
/locus_tag="Halhy_0154"
/note="Monoamine oxidase [Amino acid transport and
metabolism]; Region: COG1231"
/db_xref="CDD:31424"
gene 169816..170661
/locus_tag="Halhy_0155"
/db_xref="GeneID:10584308"
CDS 169816..170661
/locus_tag="Halhy_0155"
/note="KEGG: dfe:Dfer_1452 xylose isomerase domain protein
TIM barrel;
SPTR: AP endonuclease, family 2;
IMG reference gene:2504769507"
/codon_start=1
/transl_table=11
/product="xylose isomerase domain-containing protein"
/protein_id="YP_004444941.1"
/db_xref="GI:332662153"
/db_xref="InterPro:IPR013022"
/db_xref="GeneID:10584308"
/translation="MKYMLYIILFLMSGVHTFAQDIFAQNNLTAWCIVPFDKVKRGPE
ERVMMLEKLGFKQYVYDWRSEHIPTFDQEIKLAKQHNIVMEGVWLWVNSNVDKTGQLS
ADNLKVIDIVAKNNLKTTFWVGFDNGFFDGLSHHEKVAKGAAFLTYLHSVLAPLKCKM
ALYNHGGWFGEPENEIEIIKKSGLKGIGIVYSFHHGHHQINRFHSMLKNMLPYLVAIN
LDGMDLNKGQILPIGTGKSEKEMIHLIRESGFKGRIGILGHRDDQDVEMILQENLAGL
KGILK"
gene complement(170686..173361)
/locus_tag="Halhy_0156"
/db_xref="GeneID:10584309"
CDS complement(170686..173361)
/locus_tag="Halhy_0156"
/note="InterPro IPR013737:IPR008902;
KEGG: bth:BT_2524 alpha-rhamnosidase;
PFAM: Bacterial alpha-L-rhamnosidase; Bacterial
alpha-L-rhamnosidase N-terminal;
SPTR: Alpha-rhamnosidase;
IMG reference gene:2504769508;
PFAM: Bacterial alpha-L-rhamnosidase; Alpha-L-rhamnosidase
N-terminal domain"
/codon_start=1
/transl_table=11
/product="alpha-L-rhamnosidase"
/protein_id="YP_004444942.1"
/db_xref="GI:332662154"
/db_xref="InterPro:IPR008902"
/db_xref="InterPro:IPR008928"
/db_xref="InterPro:IPR008979"
/db_xref="InterPro:IPR013737"
/db_xref="GeneID:10584309"
/translation="MKFTLFSLLLLFTNILLQVDSFAKPIDLRCEYLQNPLGVDVSAP
RFSWRLDDARPGATQSAYQLWVGTDSVGLLQGKGLAWTSGKVLSSQTLVAYAGKPLPA
FSKYFWAVAAWGNDGQRSLSTTAHFETGVMHASNWKGAWISDTRDVKIKPAPYFRKAF
GLSKKIKSARAYIAVAGLYELSINGQIIGNHRLDPMYTRFDRRTLYVTHDVTAQLQQG
KNAIGVLLGNGWYNHQSTAVWYFHEAPWRNRPTFCMDLRIVYTDGSVETISSGKDWKT
ALSPVIFNSIYTAEHYDARLEQVGWNTADFDDTKWKSVIFRAAPSSNVVSQLMHPIRN
VEEIAVKKMSKINDTTYLFDLGRNISGVSSLRVRGGAGTQIRLRHTERLNDQGRADMS
NIDVHYRPTDNSDPFQTDIFILKGGGEESFMPRFNYKGFQYVEVSANQPISLSASSLK
GYFMHTDLPQLGQVSSSNPTLDKIWWATNNAYLSNLFGYPTDCPQREKNGWTGDAHIA
SETGLYNYDGITVYEKWLADHRDEQQPNGVLPSIIPTSGWGYEWGNGPDWTSTIAIIP
WNIYLFYGDAKLLSDCYDNIKRYVDAITAQSTDGLTTWGLGDWVPVKSKAPVELTSSI
YYFVDATILAKAAKLLKKPADYEKYTALAQKIQNAINAKYLNAETGIYGSGTQTELSA
PLHWGLVPPILKAKVAANLAQRVKADNAHLDVGLLGTKTILNALSDNGYADLAYQIAA
QEDFPSWGWWIKNGATTLFENWPIDAKSDISMNHIMFGEIGAWYYKALGGIKPDPAMP
GFKNILLHPHFVAGLEEFKASFKTPQGELVSNWEKTAAGIRYVLTVPPNSSATLRLDV
QAGQTVSHKGQVWPSEAKTSFVRNLKAGHYELLIK"
misc_feature complement(172354..172872)
/locus_tag="Halhy_0156"
/note="Alpha-L-rhamnosidase N-terminal domain; Region:
Bac_rhamnosid_N; pfam08531"
/db_xref="CDD:149548"
misc_feature complement(170800..172329)
/locus_tag="Halhy_0156"
/note="Bacterial alpha-L-rhamnosidase; Region:
Bac_rhamnosid; pfam05592"
/db_xref="CDD:147646"
gene complement(173394..174044)
/locus_tag="Halhy_0157"
/db_xref="GeneID:10584310"
CDS complement(173394..174044)
/locus_tag="Halhy_0157"
/note="KEGG: lby:Lbys_3570 hypothetical protein;
SPTR: uncharacterized protein;
IMG reference gene:2504769509"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444943.1"
/db_xref="GI:332662155"
/db_xref="InterPro:IPR008960"
/db_xref="InterPro:IPR015922"
/db_xref="GeneID:10584310"
/translation="MDQPSNQAIIIQQGHWTPLESTRFFHATDGAAADFPTVVKLKAD
EEFLHVSFVCEKDTYVEQNFYVEHNQPLYNQEVFEVFIAPGTADPDQYLELEINPNNA
IWVGQISNPSRGDQSGISAEMVEPSNSKILHSAKKGKKSWSGTLSIPWTLISAEKATQ
YRINFYRIVSTQSQTQKDWKCNVDNCAFLCWNSTMSGKKPAFHRPRRFGLLTILEK"
misc_feature complement(173418..173999)
/locus_tag="Halhy_0157"
/note="DOMON-like type 9 carbohydrate binding module;
Region: CBM9_like_3; cd09620"
/db_xref="CDD:187678"
misc_feature complement(order(173559..173561,173742..173744,
173748..173750,173808..173810))
/locus_tag="Halhy_0157"
/note="putative ligand binding site [chemical binding];
other site"
/db_xref="CDD:187678"
gene 174404..175546
/locus_tag="Halhy_0158"
/db_xref="GeneID:10584311"
CDS 174404..175546
/locus_tag="Halhy_0158"
/note="COGs: COG0513 Superfamily II DNA and RNA helicase;
InterPro IPR014001:IPR001650:IPR011545;
KEGG: sli:Slin_2449 DEAD/DEAH box helicase domain protein;
PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal;
DNA/RNA helicase, C-terminal;
SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase,
C-terminal;
SPTR: DEAD/DEAH box helicase domain protein;
IMG reference gene:2504769510;
PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box
helicase"
/codon_start=1
/transl_table=11
/product="DEAD/DEAH box helicase"
/protein_id="YP_004444944.1"
/db_xref="GI:332662156"
/db_xref="InterPro:IPR000629"
/db_xref="InterPro:IPR001650"
/db_xref="InterPro:IPR011545"
/db_xref="InterPro:IPR014014"
/db_xref="InterPro:IPR014021"
/db_xref="GeneID:10584311"
/translation="MTFKELNLIDPILHALESEGYTIPTPIQQKAIPVLLERKDLLGC
AQTGTGKTAAFAIPILQLLYQDKGLSKGPRQLKALILTPTRELAIQISESFGAYGRNC
GLKHAVIFGGVNQSKQVEAIRGGLDILVATPGRLLDLMNQQLLSLQHINTFVLDEADR
MLDMGFVHDVKRIITRLPQRRQSLFFSATMPPEIQKLANTILSNPVKVEVSPISSTTE
MVEQMVYFVEKRDKRNLLIQLLRSPNVKSALVFTRTKHGADKINRDIVKAGIRSNAIH
GNKSQNARQSALNGFKEGKLRVLVATDIAARGIDVDNLSHVINYDLPNIPETYVHRIG
RTGRAGASGIALSFCDSEERAYLRDISKLIAKNIPSVNYHPEMELK"
misc_feature 174410..175030
/locus_tag="Halhy_0158"
/note="DEAD-box helicases. A diverse family of proteins
involved in ATP-dependent RNA unwinding, needed in a
variety of cellular processes including splicing, ribosome
biogenesis and RNA degradation. The name derives from the
sequence of the Walker B motif; Region: DEADc; cd00268"
/db_xref="CDD:28928"
misc_feature 174449..175048
/locus_tag="Halhy_0158"
/note="DEAD-like helicases superfamily; Region: DEXDc;
smart00487"
/db_xref="CDD:197756"
misc_feature 174545..174559
/locus_tag="Halhy_0158"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28928"
misc_feature 174869..174880
/locus_tag="Halhy_0158"
/note="Mg++ binding site [ion binding]; other site"
/db_xref="CDD:28928"
misc_feature 174962..174970
/locus_tag="Halhy_0158"
/note="motif III; other site"
/db_xref="CDD:28928"
misc_feature 175061..175447
/locus_tag="Halhy_0158"
/note="Helicase superfamily c-terminal domain; associated
with DEXDc-, DEAD-, and DEAH-box proteins, yeast
initiation factor 4A, Ski2p, and Hepatitis C virus NS3
helicases; this domain is found in a wide variety of
helicases and helicase related proteins; may...; Region:
HELICc; cd00079"
/db_xref="CDD:28960"
misc_feature order(175160..175171,175229..175234,175307..175315)
/locus_tag="Halhy_0158"
/note="nucleotide binding region [chemical binding]; other
site"
/db_xref="CDD:28960"
misc_feature order(175331..175333,175394..175396,175406..175408,
175415..175417)
/locus_tag="Halhy_0158"
/note="ATP-binding site [chemical binding]; other site"
/db_xref="CDD:28960"
gene complement(175738..175851)
/locus_tag="Halhy_0159"
/db_xref="GeneID:10584312"
CDS complement(175738..175851)
/locus_tag="Halhy_0159"
/note="IMG reference gene:2504769511"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444945.1"
/db_xref="GI:332662157"
/db_xref="GeneID:10584312"
/translation="MVQLRKELHKTWKNQMNNLAVGVYERKKENWGNQVFV"
gene 175911..176330
/locus_tag="Halhy_0160"
/db_xref="GeneID:10584313"
CDS 175911..176330
/locus_tag="Halhy_0160"
/note="IMG reference gene:2504769512"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444946.1"
/db_xref="GI:332662158"
/db_xref="GeneID:10584313"
/translation="MSLAKKVNLIIYRFRERGLEIFLVNSPDSEEWAIPQKHAEENNP
LKTDVDRFIELDPVQPENGAPEEAFAVEGEWHDIPSLKSMLFEDAVYLKDKLKNEMDQ
GAFVVFKEAFKKVMPHQYAFLKELKDILTDRNSVKDL"
misc_feature 175935..176171
/locus_tag="Halhy_0160"
/note="Nudix hydrolase is a superfamily of enzymes found
in all three kingdoms of life, and it catalyzes the
hydrolysis of NUcleoside DIphosphates linked to other
moieties, X. Enzymes belonging to this superfamily require
a divalent cation, such as Mg2+ or Mn2+...; Region:
Nudix_Hydrolase; cl00447"
/db_xref="CDD:212606"
gene complement(176347..177045)
/locus_tag="Halhy_0161"
/db_xref="GeneID:10584314"
CDS complement(176347..177045)
/locus_tag="Halhy_0161"
/note="IMG reference gene:2504769513"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444947.1"
/db_xref="GI:332662159"
/db_xref="GeneID:10584314"
/translation="MLPVKSSHFIVALLSFVLVNFFACSPDRNAQNWVRKTERQWVKL
EKKQPAWLETLDAHSLNNQLQFLSMSQEQAVAWVGKPLNPAIKKNIENLDRRLKRAQT
RLKLQQNDPSIYNLGLRLYTLYGHDQKLETAKVEMLEKYLDQAPQYYRQARQKLASPE
ASRCDSAVLQHIASVTFLRGALSKQLDGSQITVEKTKVLYKKINRACFYMKDYLAWCR
SVAFEARQLSKFTK"
gene complement(177060..177731)
/locus_tag="Halhy_0162"
/db_xref="GeneID:10584315"
CDS complement(177060..177731)
/locus_tag="Halhy_0162"
/note="COGs: COG0283 Cytidylate kinase;
HAMAP: Cytidylate kinase;
InterPro IPR003136:IPR000623:IPR011994;
KEGG: cat:CA2559_10343 cytidylate kinase;
PFAM: Cytidylate kinase region; Shikimate kinase;
SPTR: Cytidylate kinase;
TIGRFAM: Cytidylate kinase;
IMG reference gene:2504769514;
PFAM: Cytidylate kinase;
TIGRFAM: cytidylate kinase"
/codon_start=1
/transl_table=11
/product="cytidylate kinase"
/protein_id="YP_004444948.1"
/db_xref="GI:332662160"
/db_xref="InterPro:IPR003136"
/db_xref="InterPro:IPR011994"
/db_xref="GeneID:10584315"
/translation="MFQIAIDGHSSCGKSTLARALARELGYIYIDSGAMYRAVTLFFL
ENRVDLYDQQQIMDNLHKLEVSFVLAEAGNRTLLNGRDVEDRIREMDVAAKVSPVATI
PEVRRKMVKRQRELAQNQGVVMDGRDIGSVVFPKAALKIFLTATVDRRVERRQRQLLE
QGHVIDYEDILHNLYERDYIDSTRSDSPLMKAPDAIVIDNSNLSPEEQLAICALLARH
RLFHV"
misc_feature complement(177072..177728)
/locus_tag="Halhy_0162"
/note="cytidylate kinase; Provisional; Region: cmk;
PRK00023"
/db_xref="CDD:178800"
misc_feature complement(177129..177725)
/locus_tag="Halhy_0162"
/note="Cytidine monophosphate kinase (CMPK) catalyzes the
reversible phosphorylation of cytidine monophosphate (CMP)
to produce cytidine diphosphate (CDP), using ATP as the
preferred phosphoryl donor; Region: CMPK; cd02020"
/db_xref="CDD:73296"
misc_feature complement(order(177180..177182,177348..177353,
177414..177416))
/locus_tag="Halhy_0162"
/note="CMP-binding site; other site"
/db_xref="CDD:73296"
misc_feature complement(order(177189..177191,177201..177203))
/locus_tag="Halhy_0162"
/note="The sites determining sugar specificity; other
site"
/db_xref="CDD:73296"
gene complement(177931..178155)
/locus_tag="Halhy_0163"
/db_xref="GeneID:10584316"
CDS complement(177931..178155)
/locus_tag="Halhy_0163"
/note="KEGG: phe:Phep_2575 hypothetical protein;
SPTR: uncharacterized protein;
IMG reference gene:2504769515;
PFAM: Protein of unknown function (DUF2795)"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444949.1"
/db_xref="GI:332662161"
/db_xref="InterPro:IPR021527"
/db_xref="GeneID:10584316"
/translation="MYWTLDLASHLEDAPYPATRDELIDYAIRSGSPKEVIENLQAME
DDGEEEYESIEDIWPDYPKKDDFLFNDDEY"
misc_feature complement(<178027..178125)
/locus_tag="Halhy_0163"
/note="Protein of unknown function (DUF2795); Region:
DUF2795; pfam11387"
/db_xref="CDD:204636"
gene complement(178248..179417)
/locus_tag="Halhy_0164"
/db_xref="GeneID:10584317"
CDS complement(178248..179417)
/locus_tag="Halhy_0164"
/note="KEGG: phe:Phep_0833 hypothetical protein;
SPTR: uncharacterized protein;
IMG reference gene:2504769516"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444950.1"
/db_xref="GI:332662162"
/db_xref="GeneID:10584317"
/translation="MQIFLHLFTLLLFFGNLAQAETRTVEFIFYTEKIRINFNTDILQ
VVKPSIEGKSIKNHYLSLQRTTHQSLLTDLKLQREAFALSDWLYAELVRGTVDQILSG
RSNAEKNLLIWFCLSESGFDTRVTFRDQRVFVCVFTKDEIYEAPLIEDRGRTFVNLSA
IAQIKADEEGVFLLDFAAKPNGRAFSFQLGTFPGIKPLLEKKTLNFRFKEQQFPLEVN
FDRNWVRIMERHPLIDEREYLKAPMSEVLRSSLLPQLTVLIKGKSSTEALELITAFTR
SCFKYKEDKEFFGRSKPMIPDEVFHYPYSDCEDRSALYYALVKELLGWPMLIIGFPDH
LTIAVSIPDFNGDAIEYQGRKYYFCDPTGPANSYEIGRLPEEFIGQEYEILGQFN"
gene complement(179512..180576)
/locus_tag="Halhy_0165"
/db_xref="GeneID:10584318"
CDS complement(179512..180576)
/locus_tag="Halhy_0165"
/note="COGs: COG0809
S-adenosylmethionine:tRNA-ribosyltransferase-isomerase
(queuine synthetase);
HAMAP: S-adenosylmethionine:tRNA
ribosyltransferase-isomerase;
InterPro IPR003699;
KEGG: cpi:Cpin_1529
S-adenosylmethionine/tRNA-ribosyltransferase-iso merase;
PFAM: Queuosine biosynthesis protein;
SPTR: S-adenosylmethionine:tRNA
ribosyltransferase-isomerase;
TIGRFAM: Queuosine biosynthesis protein;
IMG reference gene:2504769517;
PFAM: Queuosine biosynthesis protein;
TIGRFAM: S-adenosylmethionine:tRNA
ribosyltransferase-isomerase"
/codon_start=1
/transl_table=11
/product="S-adenosylmethionine--tRNA
ribosyltransferase-isomerase"
/protein_id="YP_004444951.1"
/db_xref="GI:332662163"
/db_xref="InterPro:IPR003699"
/db_xref="GeneID:10584318"
/translation="MRTKLSQFTYELPKKLIAQYPADSRHEARMMVVNRQTGTIEHKV
FKDVLNIFSEGDVMVFNNTKVFPARLYGRKEKTGAKIEVFLLRELNNESRLWDVLVDP
ARKIRVGNKLYFSDDNDNDILVAEVVDNTTSRGRTIRFLYDGTDDEFQRELATLGNTP
LPKYIIRPAEDVDRDRYQTVYAKEIGAVAAPTAGLHFSRELMKRLELKGIDFAELTLH
VGLGTFRSIDVEDLSKHKMDAEYFRIPAVSVDLVNSAKERNHRICAVGTTSMRAIESA
VSAEGLLKPAEGWTNKFIYPPYEFSIADSMITNFHLPKSSLLIMICAFGGYELIMQAY
EEAVKEEYRFFSYGDSMLII"
misc_feature complement(179515..180567)
/locus_tag="Halhy_0165"
/note="Queuosine biosynthesis protein; Region:
Queuosine_synth; pfam02547"
/db_xref="CDD:202279"
misc_feature complement(179515..180567)
/locus_tag="Halhy_0165"
/note="S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; Provisional; Region: queA;
PRK00147"
/db_xref="CDD:178900"
gene 180803..182059
/locus_tag="Halhy_0166"
/db_xref="GeneID:10584319"
CDS 180803..182059
/locus_tag="Halhy_0166"
/note="COGs: COG0577 ABC-type antimicrobial peptide
transport system permease component;
InterPro IPR003838;
KEGG: cpi:Cpin_3371 protein of unknown function DUF214;
PFAM: Protein of unknown function DUF214, permase
predicted;
SPTR: uncharacterized protein;
IMG reference gene:2504769518;
PFAM: Predicted permease"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444952.1"
/db_xref="GI:332662164"
/db_xref="InterPro:IPR003838"
/db_xref="GeneID:10584319"
/translation="MGIVLRIIYESIVQALGQLNANRLRSFLSLLGITIGIFCIIGVF
SAVDSLEDNVRGSLAKLGDDVIYIQKISWAENPDNWFKYLRRPNVDYEDYEVIKEKVR
SAQLTTFYVGIGQKTVKYFQSSAERAYMLGVTQEFSEMFKLNYEQGRFFSPNEYHRGA
NKCVLGFKVSEAVFGSLDPIGKSVKINGRSYEVIGVLEKSGESIINVMNFDEVVLVSY
ELARKIANLKSNSLFGDVSICVKAAEGVSVEQMKDEITGKLRAHRRLKPKQDDNFSLN
QLSIISNFLSGFFNVLNVLGVFIGGFAILVGMFSVANIMFVSVKERTRLIGIKKALGA
KRYIILLEFLIESIILCILGGLAGLALVMVAMAGLSQITDSFQMYLSFNNAALGIILS
TVIGVLAGMIPAMQASRMDPVEAMRK"
misc_feature 180845..181570
/locus_tag="Halhy_0166"
/note="MacB-like periplasmic core domain; Region:
MacB_PCD; pfam12704"
/db_xref="CDD:205030"
misc_feature 180869..182056
/locus_tag="Halhy_0166"
/note="ABC-type antimicrobial peptide transport system,
permease component [Defense mechanisms]; Region: SalY;
COG0577"
/db_xref="CDD:30922"
misc_feature 181691..182038
/locus_tag="Halhy_0166"
/note="FtsX-like permease family; Region: FtsX; pfam02687"
/db_xref="CDD:202350"
gene 182312..183667
/locus_tag="Halhy_0167"
/db_xref="GeneID:10584320"
CDS 182312..183667
/locus_tag="Halhy_0167"
/note="COGs: COG0513 Superfamily II DNA and RNA helicase;
InterPro IPR014001:IPR001650:IPR011545;
KEGG: cpi:Cpin_3971 DEAD/DEAH box helicase domain protein;
PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal;
DNA/RNA helicase, C-terminal;
SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase,
C-terminal;
SPTR: DEAD/DEAH box helicase domain protein;
IMG reference gene:2504769519;
PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box
helicase"
/codon_start=1
/transl_table=11
/product="DEAD/DEAH box helicase"
/protein_id="YP_004444953.1"
/db_xref="GI:332662165"
/db_xref="InterPro:IPR000629"
/db_xref="InterPro:IPR001650"
/db_xref="InterPro:IPR011545"
/db_xref="InterPro:IPR014014"
/db_xref="InterPro:IPR014021"
/db_xref="GeneID:10584320"
/translation="MNFTEFGLHPDLLDGVDAMNYKTATPIQEKAIPIILEGKDLIGI
AQTGTGKTAAFILPVLNEIIESGEANFIQTLVIVPTRELAVQIDQVIEAYSYFTGVSS
IAIYGGGDGKEFAQEKNALVSGVDIVIATPGRLISHLNMGYVNFSKLRFLVLDEADRM
MDMGFQPDLMRIIGKIPQKRQTLLFSATMPESVMKLARQLTHNAESVSIALSKPAEGV
TQRAYVVYEEQKLQLVTELLKDRKGQRIVVFCSSKASVSSLYSKLHRKNLSVGQMSSD
VEQDQREETMLAFRNSKIDIIVATDVISRGIDVDGIDLVVNYDVPRDPEDYVHRVGRT
ARAERKGEAITLVSPGDQLRFRRIEKLIDKDIEKLGPPQNLGPGPEYAPNARRGKTFG
PPHRQANAQGKGGNNQHSNRSNSGGGGGGPHKKKSGSGSSRWNNKPKPSGERTEPRRD
V"
misc_feature 182318..183520
/locus_tag="Halhy_0167"
/note="ATP-dependent RNA helicase RhlB; Provisional;
Region: PRK04837"
/db_xref="CDD:179884"
misc_feature 182318..182935
/locus_tag="Halhy_0167"
/note="DEAD-box helicases. A diverse family of proteins
involved in ATP-dependent RNA unwinding, needed in a
variety of cellular processes including splicing, ribosome
biogenesis and RNA degradation. The name derives from the
sequence of the Walker B motif; Region: DEADc; cd00268"
/db_xref="CDD:28928"
misc_feature 182453..182467
/locus_tag="Halhy_0167"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28928"
misc_feature 182774..182785
/locus_tag="Halhy_0167"
/note="Mg++ binding site [ion binding]; other site"
/db_xref="CDD:28928"
misc_feature 182867..182875
/locus_tag="Halhy_0167"
/note="motif III; other site"
/db_xref="CDD:28928"
misc_feature 182978..183349
/locus_tag="Halhy_0167"
/note="Helicase superfamily c-terminal domain; associated
with DEXDc-, DEAD-, and DEAH-box proteins, yeast
initiation factor 4A, Ski2p, and Hepatitis C virus NS3
helicases; this domain is found in a wide variety of
helicases and helicase related proteins; may...; Region:
HELICc; cd00079"
/db_xref="CDD:28960"
misc_feature order(183062..183073,183131..183136,183209..183217)
/locus_tag="Halhy_0167"
/note="nucleotide binding region [chemical binding]; other
site"
/db_xref="CDD:28960"
misc_feature order(183233..183235,183296..183298,183308..183310,
183317..183319)
/locus_tag="Halhy_0167"
/note="ATP-binding site [chemical binding]; other site"
/db_xref="CDD:28960"
gene 183746..184714
/locus_tag="Halhy_0168"
/db_xref="GeneID:10584321"
CDS 183746..184714
/locus_tag="Halhy_0168"
/note="COGs: COG0385 Na+-dependent transporter;
InterPro IPR002657;
KEGG: na+-dependent transporter-like protein;
PFAM: Bile acid:sodium symporter;
SPTR: Possible lipoprotein transmembrane protein;
IMG reference gene:2504769520;
PFAM: Sodium Bile acid symporter family"
/codon_start=1
/transl_table=11
/product="bile acid:sodium symporter"
/protein_id="YP_004444954.1"
/db_xref="GI:332662166"
/db_xref="InterPro:IPR002657"
/db_xref="InterPro:IPR016833"
/db_xref="GeneID:10584321"
/translation="MKPKIDKFVLAIIGVVLLAYFVPQWGSSASRIPLNQIGSIGISM
IFFFYGLKLSPEQIKTGLKNWKLHLLVQSSTFLIFPLIVLLFYPFMQSAQGQTVWLAF
LFLAALPSTVSSSVVMVSIAKGNLPAAIFNASISGLIGIVITPLWMGLFMQHSAGDFN
LGGIYLKLITEILLPVTIGVILQRYWGKFAREYSRYLTLFDKTIILLIIYKSFAESFS
ENVFSSVDAMDLLLISVAATVLFYVVYFLTGYLSDRLGFSEEDRITVQFCGSKKSLVH
GTVFSKILFQHMASVGIMLLPLMLFHAIQIFIVSVVAAKLSARKKT"
misc_feature 183755..184711
/locus_tag="Halhy_0168"
/note="Predicted Na+-dependent transporter [General
function prediction only]; Region: COG0385"
/db_xref="CDD:30734"
misc_feature 183761..184699
/locus_tag="Halhy_0168"
/note="SBF-like CPA transporter family (DUF4137); Region:
DUF4137; pfam13593"
/db_xref="CDD:205771"
gene 184711..187896
/locus_tag="Halhy_0169"
/db_xref="GeneID:10584322"
CDS 184711..187896
/locus_tag="Halhy_0169"
/note="InterPro IPR002860;
KEGG: sli:Slin_1570 glycosyl hydrolase BNR
repeat-containing protein;
PFAM: BNR repeat;
SPTR: glycosyl hydrolase, BNR repeat;
IMG reference gene:2504769521;
PFAM: BNR/Asp-box repeat"
/codon_start=1
/transl_table=11
/product="glycosyl hydrolase"
/protein_id="YP_004444955.1"
/db_xref="GI:332662167"
/db_xref="InterPro:IPR002860"
/db_xref="GeneID:10584322"
/translation="MTTHPIKKPSAITPSLIFIYRFDHYPFGTILTIFSMKKLLLTLC
GLALLGALQAQNPTTFTNPYEAKYFEKFKWRNIGPMRGGRSLGCTGSPGRTNEYYFGA
TGGGLWKTTDGGQEWFPVTDGQITCSSIGAVAVAETNPDIVYIGGGEVQLRGSITQGD
GVYKSTDGGKTWRHIGLKETQAIARIRVHPTNPDIVYVSALGHPYGDNEERGVFRSTD
GGNTWKKVLYVSPKTGSVDLIIDRVNPKIIYATTWQVYRKTWKMWGGGPECKLWKSVD
GGDTWIDLSKNPGMPTGTLGKIGITVSPVDNNRLWAIVEANEGGVYRSDDGGWSWKKV
NEERKLRQRAFYYSRIYADPFDKNTVYGLNVDFYKSTDGGVTFDKEITGQHGDYHDLW
IDPNNPQRMIVSDDGGGSVSVNGGQSWTEQDYCTTQLYHVTVTSDVPYHVAGAQQDNS
TLAIPSDGWDHMLAGGPNHGWYYEVGGGESGYITQHPVNKDIFYAGSQGALLTRYDRS
NGQNRDIQVYPRFFSGEPSSALPERWQWTYPIVFSPKDPNQLFTCSQHVWRTKDDGQS
WEKISPDLTYADPETLGPTGGEITKDMNGPEIYATVYALAPSNHDVNTIWAGSDDGRI
HITRDGGKSWQEITPKDLPKHSVVSIIDESKHQSGTAYVAVYRYQVDDRQPYVYRTRD
FGKTWTKIITGIANGHFARAVREDHVRPGLLFLGTEHGVYVSFDAGDHWQALQLNLPD
TPIRDLVIKDNDVVLGTHGRGFWILDDIHPFRQLSPENLKQPATLFKPADAIRGVTTA
MFQYYLQEKVDSVKIEVLDAKGATVISYKGDNTPAQRGAGGGPKPSTTAGLNTFSWNL
RYPGATVFDGMILWGARPQNGPKAPLGKYQVKFTAGTYSQTYPFQILMNPNLKGINAA
DLQEQFEVAMKIRDKESAGNEAVIRIRNLRKQMEARMKETTDASFTTAAKDLNTKLTV
IEEDLYQTKNQSGQDPLNFPIKLGNRISAVRRSLESGDAKPTAGVHKVFAELSKELEG
HLTKLDATISGALPGLNKQLLALQLKEIKDK"
misc_feature 185191..>185709
/locus_tag="Halhy_0169"
/note="Glycosyl hydrolase families: GH43, GH62, GH32,
GH68; Region: GH43_62_32_68; cl14647"
/db_xref="CDD:209879"
misc_feature order(185455..185457,185626..185628)
/locus_tag="Halhy_0169"
/note="active site"
/db_xref="CDD:185718"
misc_feature 187072..>187383
/locus_tag="Halhy_0169"
/note="FlgD Tudor-like domain; Region: FLgD_tudor;
pfam13861"
/db_xref="CDD:206032"
misc_feature 187090..187383
/locus_tag="Halhy_0169"
/note="FlgD Ig-like domain; Region: FlgD_ig; pfam13860"
/db_xref="CDD:206031"
gene 188039..189301
/locus_tag="Halhy_0170"
/db_xref="GeneID:10584323"
CDS 188039..189301
/locus_tag="Halhy_0170"
/note="COGs: COG2855 membrane protein;
InterPro IPR018383;
KEGG: fjo:Fjoh_4651 hypothetical protein;
PFAM: Uncharacterised protein family UPF0324, prokaryote;
SPTR: Probable membrane protein;
IMG reference gene:2504769522;
PFAM: Conserved hypothetical protein 698;
TIGRFAM: conserved hypothetical integral membrane protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444956.1"
/db_xref="GI:332662168"
/db_xref="InterPro:IPR018383"
/db_xref="GeneID:10584323"
/translation="MEASNARFRISEDWTSVLIGFLIIGLALSTLFILPAPQYGWSNG
GELVNNVFSAANFSLIFNQFAFILLFGVLGARLTGIKVNSFISTLLLLYSITLLAQIL
AGNAFIKSLNLEAVIFSLILGLLIRQFFNLPEWFTKALSTELFVKIGLVLLGCSVIFS
DILKNGTLGLIQSLVVVLSVWYFSYWLCKRWKIDEEMAFMLSSAVSICGVSAAIATAG
AINGDSKKLSFVVSVVLIVAIPMMIFMPILANYMGLSQEITGAWLGGTIDTSGAVVAS
GSMVGEKALEVSTIVKFSQNVLLGIAAFFISVYWTLTGKESEGVKVEKPTLGIIWDRF
PKFVLGFLAASLVFSFLLEPDTVKEVKGHLKNIQTLWFGLAFTSIGLETKFSDLFKDG
FRKPFWAFLIAQFFNIIITLILAYLLFR"
misc_feature 188333..189295
/locus_tag="Halhy_0170"
/note="Conserved hypothetical protein 698; Region:
Cons_hypoth698; cl01075"
/db_xref="CDD:141086"
gene 189313..190692
/locus_tag="Halhy_0171"
/db_xref="GeneID:10584324"
CDS 189313..190692
/locus_tag="Halhy_0171"
/note="COGs: COG0277 FAD/FMN-containing dehydrogenase;
InterPro IPR006094:IPR004113;
KEGG: rpc:RPC_2091 FAD linked oxidase-like;
PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase,
N-terminal;
PRIAM: D-lactate dehydrogenase (cytochrome);
SPTR: FAD linked oxidase-like;
IMG reference gene:2504769523;
PFAM: FAD binding domain; FAD linked oxidases, C-terminal
domain"
/codon_start=1
/transl_table=11
/product="D-lactate dehydrogenase"
/protein_id="YP_004444957.1"
/db_xref="GI:332662169"
/db_xref="InterPro:IPR004113"
/db_xref="InterPro:IPR006094"
/db_xref="InterPro:IPR016164"
/db_xref="InterPro:IPR016166"
/db_xref="InterPro:IPR016167"
/db_xref="InterPro:IPR016168"
/db_xref="InterPro:IPR016171"
/db_xref="GeneID:10584324"
/translation="MELVQQLTEALGAECVLSHAEAAQRIASNWVGAENLNCRALLLP
RNTAEVSTALKICHAAKQPVVPHGGLTNVVGGVLTQGHEIALSLERMNAIEAVDEANR
TATVQAGVVLQELQNQLQPRGLFFPLDLGAKGSCMIGGNISTNAGGLQALRYGVMRNL
VLGLEVVLADGTIITSMNQLLKNNAGYDLKHLFIGSEGTLGVITRAVLKLEDVPLSKN
TAYIALNSFAQACDFLSFAKKTLGHTLSTYELMWQDYYQLMTSLPSRYAPPLPQDHAY
YVLLEAQGYHPENDQKLFQETLERAFESGLIADACLAQSQQELDWFWGIREQVDFIFS
VHQPVFLFDVSLSISNMETYTQEIAKGLQKVWPDVFLYVFGHMGDGNLHLFVSCGQND
QATRHQVEEIVFNPLTAIGGSITAEHGVGLEKKAWLHLSRNPAEIALMKSLKAALDPA
GILNPGKIF"
misc_feature 189328..190689
/locus_tag="Halhy_0171"
/note="FAD/FMN-containing dehydrogenases [Energy
production and conversion]; Region: GlcD; COG0277"
/db_xref="CDD:30625"
misc_feature 189427..189837
/locus_tag="Halhy_0171"
/note="FAD binding domain; Region: FAD_binding_4;
pfam01565"
/db_xref="CDD:201863"
gene 190750..191592
/locus_tag="Halhy_0172"
/db_xref="GeneID:10584325"
CDS 190750..191592
/locus_tag="Halhy_0172"
/note="COGs: COG2897 Rhodanese-related sulfurtransferase;
InterPro IPR001763;
KEGG: fjo:Fjoh_2623 rhodanese domain-containing protein;
PFAM: Rhodanese-like;
PRIAM: 3-mercaptopyruvate sulfurtransferase;
SMART: Rhodanese-like;
SPTR: Rhodanese domain protein;
IMG reference gene:2504769524;
PFAM: Rhodanese-like domain"
/codon_start=1
/transl_table=11
/product="3-mercaptopyruvate sulfurtransferase"
/protein_id="YP_004444958.1"
/db_xref="GI:332662170"
/db_xref="InterPro:IPR001763"
/db_xref="GeneID:10584325"
/translation="MSSSITPIIHPQELLALQASPNLVIIDARSGPDVRVRYVTSHLA
GALHADLDTDLADIKPNAADGGRHPLPSPAQFSKVLGKLGITPESQVVVYDDKNGANA
AARFWWMLRAVGHQQVQVLNGGLNAAIEAGFPFLAGEEIAAPVEDYPIQDWSLPLADI
AEVEQAGQDPQRLIIDVREKVRYDGITEPIDLVAGHIPGAINVPFANNLDSQGFYLSP
EVLHEQYAVVLNNRKPEEVIVHCGSGVTACHTLLAMDYAGFEIPKLYVGSWSEWSRSD
KPLA"
misc_feature 190750..191589
/locus_tag="Halhy_0172"
/note="Rhodanese-related sulfurtransferase [Inorganic ion
transport and metabolism]; Region: SseA; COG2897"
/db_xref="CDD:32722"
misc_feature 190771..191145
/locus_tag="Halhy_0172"
/note="Thiosulfate sulfurtransferase (TST), N-terminal,
inactive domain. TST contains 2 copies of the Rhodanese
Homology Domain; this is the 1st repeat, which does not
contain the catalytically active Cys residue. The role of
the 1st repeat is uncertain, but it...; Region:
TST_Repeat_1; cd01448"
/db_xref="CDD:29079"
misc_feature 191032..191034
/locus_tag="Halhy_0172"
/note="active site residue [active]"
/db_xref="CDD:29079"
misc_feature 191221..191571
/locus_tag="Halhy_0172"
/note="Thiosulfate sulfurtransferase (TST), C-terminal,
catalytic domain. TST contains 2 copies of the Rhodanese
Homology Domain; this is the second repeat. Only the
second repeat contains the catalytically active Cys
residue; Region: TST_Repeat_2; cd01449"
/db_xref="CDD:29080"
misc_feature 191470..191472
/locus_tag="Halhy_0172"
/note="active site residue [active]"
/db_xref="CDD:29080"
gene complement(191594..194629)
/locus_tag="Halhy_0173"
/db_xref="GeneID:10584326"
CDS complement(191594..194629)
/locus_tag="Halhy_0173"
/note="COGs: COG0160 4-aminobutyrate aminotransferase and
related aminotransferase;
InterPro IPR002575:IPR016047:IPR005814;
KEGG: fbc:FB2170_15008 hypothetical protein;
PFAM: Aminotransferase class-III; Aminoglycoside
phosphotransferase; Peptidase M23;
PRIAM: Alanine--glyoxylate transaminase;
SPTR: uncharacterized protein;
IMG reference gene:2504769525;
PFAM: Aminotransferase class-III; Peptidase M23;
Phosphotransferase enzyme family"
/codon_start=1
/transl_table=11
/product="alanine--glyoxylate transaminase"
/protein_id="YP_004444959.1"
/db_xref="GI:332662171"
/db_xref="InterPro:IPR002575"
/db_xref="InterPro:IPR005814"
/db_xref="InterPro:IPR011009"
/db_xref="InterPro:IPR011055"
/db_xref="InterPro:IPR015421"
/db_xref="InterPro:IPR015422"
/db_xref="InterPro:IPR015424"
/db_xref="InterPro:IPR016047"
/db_xref="GeneID:10584326"
/translation="MSFSTAEVQQLALQYFQIQGSVRTLSGEVDLNYLIETGVGQRYC
FKIAHPQTSIAELDFQNAMMEHLQAANLGLEIPVPVVGVGNKKILTHRLLNGELRYLR
ALTWVEGRVFAEANPHTPELLERVGALCGKLSAALADFDHPAAHRWIKWDPSEALWTK
EHLHAIDDPEKNKLATWALDLFQKKALPRFPQLRKSVNYNDANDYNILLSFDPLHPEV
PGVIDFGDAVYSHTINELAIAIAYAAMDKPDPLAVIGQMTRGYHQQFPLQELETEVLF
PLIVARLLISVLCSAQNRVANPENVYLQISDRPAWDLLEKLQRIAPNLAHSTVREACG
WSPHPQAEMFVNWAKTNLHQFAPLVEIDLQGPDCIWLDCSVGSADLGNYADIVDAQRL
HQRIVETMEAAQAKVGIGRYNEARPFYTTNAFAVEGNHGPEWRSIHIGLDIFMPEGTP
VFAPLDGVVHSFQDNAADRDYGPTIILQHSVSPELTFYTLYGHLSRTSLEGLYVGKPI
AKGERLCWMGPMPENGNWSPHLHFQVMLDILDLAGDFPGVAFPDKRAVWTGICPDPWY
LIAGQASPCSPAIAVAQILTERRKLLSPNLSISYTQPLYMQRGVGAYLYDHTGRRYLD
TVNNVAHVGHEHPRVVRAGQRQMAVLNTNTRYVHHQITQFAEALLATAPASLEVAFFV
NSGSEANELALRLAKTYTNQQDIIALQVGYHGNTNACVEISSYKFDGPGGKGASPRVH
VVPLPDTYRGLYRGSTPDSAQQYAQPVNEILERLHIQGRRPAAFMAETIVSCGGQIPL
PPGYLQQVYASVRTAGGLCIADEVQTGCGRPGKYFWAFEEQGVVPDIVTIGKPIGNGH
PLGAVLCTRAVADAFANGMEYFNTFGGNPVSCAIGMEVLKVIREEGLQENALTVGNYL
KLGLGELAQRFPQIGDVRGSGLFLGIELVHDPIAKLPAASIADYLANRMRTLGILMST
DGPDHNVLKIKPPMVFGKTQADFLLRMLERLLKEDGCKP"
misc_feature complement(191612..194623)
/locus_tag="Halhy_0173"
/note="hypothetical protein; Provisional; Region:
PRK06148"
/db_xref="CDD:180426"
misc_feature complement(193661..194623)
/locus_tag="Halhy_0173"
/note="Protein Kinases, catalytic domain; Region:
PKc_like; cl09925"
/db_xref="CDD:213116"
misc_feature complement(order(193904..193906,193961..193966,
194006..194008,194012..194017,194027..194029,
194309..194320,194393..194395,194492..194494,
194498..194500,194534..194536,194546..194548))
/locus_tag="Halhy_0173"
/note="active site"
/db_xref="CDD:88612"
misc_feature complement(order(193904..193906,194027..194029,
194546..194548))
/locus_tag="Halhy_0173"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:88612"
misc_feature complement(order(193961..193966,194006..194008,
194012..194017,194027..194029,194309..194320,
194393..194395,194492..194494,194498..194500,
194534..194536))
/locus_tag="Halhy_0173"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:88612"
misc_feature complement(193019..193324)
/locus_tag="Halhy_0173"
/note="Peptidase family M23; Region: Peptidase_M23;
pfam01551"
/db_xref="CDD:201854"
misc_feature complement(191618..192823)
/locus_tag="Halhy_0173"
/note="Acetyl ornithine aminotransferase family. This
family belongs to pyridoxal phosphate (PLP)-dependent
aspartate aminotransferase superfamily (fold I). The major
groups in this CD correspond to ornithine
aminotransferase, acetylornithine aminotransferase;
Region: OAT_like; cd00610"
/db_xref="CDD:99735"
misc_feature complement(order(192080..192082,192161..192166,
192170..192172,192269..192271,192485..192487,
192491..192496,192572..192580))
/locus_tag="Halhy_0173"
/note="inhibitor-cofactor binding pocket; inhibition site"
/db_xref="CDD:99735"
misc_feature complement(order(192080..192082,192161..192163,
192170..192172,192269..192271,192491..192496,
192572..192577))
/locus_tag="Halhy_0173"
/note="pyridoxal 5'-phosphate binding site [chemical
binding]; other site"
/db_xref="CDD:99735"
misc_feature complement(192080..192082)
/locus_tag="Halhy_0173"
/note="catalytic residue [active]"
/db_xref="CDD:99735"
gene complement(194678..195262)
/locus_tag="Halhy_0174"
/db_xref="GeneID:10584327"
CDS complement(194678..195262)
/locus_tag="Halhy_0174"
/note="COGs: COG0847 DNA polymerase III epsilon subunit
and related 3'-5' exonuclease;
InterPro IPR006055:IPR013520;
KEGG: ppn:Palpr_3000 exonuclease RNAse t and DNA
polymerase III;
PFAM: Exonuclease, RNase T/DNA polymerase III;
SMART: Exonuclease;
SPTR: Exonuclease RNase T and DNA polymerase III;
IMG reference gene:2504769526;
PFAM: Exonuclease"
/codon_start=1
/transl_table=11
/product="Exonuclease RNase T and DNA polymerase III"
/protein_id="YP_004444960.1"
/db_xref="GI:332662172"
/db_xref="InterPro:IPR012337"
/db_xref="InterPro:IPR013520"
/db_xref="GeneID:10584327"
/translation="MILFLDTETTGLPLNWSAPISRVNNWPRMVQLAGLLYDEEGTLL
EQLNYLVRPEGYTIPAAVVRIHGITTERALAEGVPVAQVLNDFRSILEKSKLLVAHNV
NFDHAIVGAEYHRYVKEDPLLPIPKFCTMTSPEVIYHCALPANSPRGGYKWPKLEELH
YKLFKEGIKGAHDAMVDITATARCYWELKRLGVI"
misc_feature complement(194705..195256)
/locus_tag="Halhy_0174"
/note="DEDDh 3'-5' exonuclease domain family; Region:
DEDDh; cd06127"
/db_xref="CDD:176648"
misc_feature complement(<194699..195250)
/locus_tag="Halhy_0174"
/note="DNA polymerase III, epsilon subunit and related
3'-5' exonucleases [DNA replication, recombination, and
repair]; Region: DnaQ; COG0847"
/db_xref="CDD:31188"
misc_feature complement(order(194732..194734,194747..194749,
194948..194956,194960..194965,195230..195232,
195236..195247))
/locus_tag="Halhy_0174"
/note="active site"
/db_xref="CDD:176648"
misc_feature complement(order(194732..194734,194747..194749,
194951..194956,194960..194965,195230..195232,
195236..195247))
/locus_tag="Halhy_0174"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:176648"
misc_feature complement(order(194732..194734,194747..194749,
194948..194950,195239..195241,195245..195247))
/locus_tag="Halhy_0174"
/note="catalytic site [active]"
/db_xref="CDD:176648"
gene 195413..196966
/locus_tag="Halhy_0175"
/db_xref="GeneID:10584328"
CDS 195413..196966
/locus_tag="Halhy_0175"
/note="COGs: COG3540 Phosphodiesterase/alkaline
phosphatase D;
InterPro IPR018946:IPR006311;
KEGG: ava:Ava_2698 twin-arginine translocation pathway
signal;
PFAM: Alkaline phosphatase D-related;
SPTR: All0207 protein;
IMG reference gene:2504769527;
PFAM: PhoD-like phosphatase"
/codon_start=1
/transl_table=11
/product="alkaline phosphatase"
/protein_id="YP_004444961.1"
/db_xref="GI:332662173"
/db_xref="InterPro:IPR006311"
/db_xref="InterPro:IPR018946"
/db_xref="GeneID:10584328"
/translation="MSNPSRRQFVKQLGYAAAAVTVPTWFYIQRSPSMRPLMPSGLSS
GDVISDRAMIWARADRPSRMWIDWSTTESFARFKTVQGPAALTEFDFTTKMDITDLPV
GQEIFYRVRYQSLEDLKLWSEPVVGRLRTAPGTLRNIRFQWGGDTCGQGWGINPELGG
MKIYSTMAQRNPDFFIHSGDTIYADGPIQAEVKLPNGKLWKNIVTEEKSKVAETLAEF
RGNYRYNYLDENLRNFNAKVPILYQWDDHEVLNNWYPEEIHTDNRYTEKNVALLAARA
KRAFLEYNPIRSNGDDPERIYRKIPYGPMLDVFMIDMRSYRAANGPNKQTKAGADTAF
LGRQQIQWLKEGLLASKATWKIIASDMPLGLIVYDDYVNRSTFENGANGNGPALGREL
ETADLLRFMLHNEIKNVVWLTADVHYCAAHYYDPAKAQFKEFSPFYEFVAGPLNSGTF
GPGEMDNTFGPQVLFQKAPPAGQSNLSPAAGMQFFGEVNIDAGSQEMKVALWDNAGVK
LFEKTISTT"
misc_feature 195425..196951
/locus_tag="Halhy_0175"
/note="Phosphodiesterase/alkaline phosphatase D [Inorganic
ion transport and metabolism]; Region: PhoD; COG3540"
/db_xref="CDD:33342"
misc_feature 195860..>196363
/locus_tag="Halhy_0175"
/note="Bacillus subtilis PhoD and related proteins,
metallophosphatase domain; Region: MPP_PhoD; cd07389"
/db_xref="CDD:163632"
misc_feature order(195863..195865,195950..195952,196148..196153,
196352..196354)
/locus_tag="Halhy_0175"
/note="putative active site [active]"
/db_xref="CDD:163632"
misc_feature order(195863..195865,195950..195952,196148..196150,
196352..196354)
/locus_tag="Halhy_0175"
/note="putative metal binding site [ion binding]; other
site"
/db_xref="CDD:163632"
misc_feature <196328..>196591
/locus_tag="Halhy_0175"
/note="metallophosphatase superfamily, metallophosphatase
domain; Region: MPP_superfamily; cl13995"
/db_xref="CDD:212351"
misc_feature <196601..196747
/locus_tag="Halhy_0175"
/note="metallophosphatase superfamily, metallophosphatase
domain; Region: MPP_superfamily; cl13995"
/db_xref="CDD:212351"
gene 197020..200826
/locus_tag="Halhy_0176"
/db_xref="GeneID:10584329"
CDS 197020..200826
/locus_tag="Halhy_0176"
/note="KEGG: chu:CHU_2243 hypothetical protein;
SPTR: uncharacterized protein;
IMG reference gene:2504769528;
TIGRFAM: conserved repeat domain"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444962.1"
/db_xref="GI:332662174"
/db_xref="InterPro:IPR011047"
/db_xref="GeneID:10584329"
/translation="MIPRIFTLVLLLSSRLCFAQFTEHYTVDSLTESGQPSKSIFYQN
HVYALGISTDNEGPEFIARKLDTLGNTVWSTALITPRLGYPPTYQCFHLSTLDDQYLL
VGISDYASLAYTILKIDLKNGAIISKYLDTNGGYTYTELSFASKDTAVFIVEAYHDLI
LATFDKLSGKTVQTYKLGGRDLNPFAIVGDKRGNVYYSKGDTIFKINYQNPGLKLWTL
PFPALDKITISKIYLDPDDGALYAFGQAKYNYTLPIVVKIDPQAGKIIWSTKIEDLGD
FIFSAMDVSPRSLYISWNDRFAGGAYYTPTSKIDKQTGAIIWSKLHRFDPSLPISQRT
TVITAGSDGIYLLGHDWGIMKLDTLSGAKIYSFQVNVYESIYDLQGYNPGRNIFETPT
RLISIGQKPYRSISFKEVFLTLDKNTGKIIAEKDYGGLKQYDAQTIQMLATPQGQFIA
IQQIGAMGKVVLFDADNTPLWEYFLPQERKLIYAKILNDSLLAVLSGGFNLDLFNFVK
KKFLKNFPISNTDYSTFFLAKPSIVFHPPNMIFVAIHRNASEPQTAMYRIDLPANFNS
LNEHTLYIRNSVSLPSDKFSVNNVLVPLNKDTIIFINGYSIEKRSIPSSDIRDDYKGI
PTGFVQKVHLDHYQNNFLLALGYDRSEQVVLTKINRTAFTKVWTNSLPVYGQISKWIQ
GETSNIIYIIVNQANRQLHLLKYDTENQTVIWQKTLFETPNESVHFTDICLNQNDQSL
LIAGYTESIPQNKKAIFINIGFDGSIQSNLLAEGDFPGNNQGLCVLYLEPANKSYFGG
SINKSPQKASSAFIYSFSADQLNNSIKGLIFWDKNSDGKQSKDEPGVALGDVFLGFTT
RVYHNAEGQFKTLVPSGQFTLRYRVPEHWILTSGEFSYPIDASNIQNLKDTFRFGIIP
IQMVNKIDVSATSQQLVCNEEAPLYVIVKNKGTSIQNVKLRLDFQGTPILQNMLPDSI
RQRAMYWTFDSLSPGAARWIKLDFLIPGVGQIGDSLVYKSTAFYQQSPNLVDSTIYRY
QDILLCSYDPNDKLVQPEGLQKNKLTLFNQYLNYTIRFQNTGNFPARHITIIDTIDRD
LDFASFEFLNASHPITEVTGKGNVVKFVFKNINLPDSTNNEPESHGFVSFRIKDRSGL
AEKTTINNTAYIYFDQNPAIVTNTTQNIMVSKFEDISTSSQDKSISPHFRLYPNPAQD
YFLLDASMDNFSSIKWKMINTLGKTCLEGNTHRFPQHISTHTLPNGMYYLILEGRKIM
KVVITR"
misc_feature 197614..198438
/locus_tag="Halhy_0176"
/note="PQQ-like domain; Region: PQQ_2; pfam13360"
/db_xref="CDD:205539"
gene complement(200929..201771)
/locus_tag="Halhy_0177"
/db_xref="GeneID:10584330"
CDS complement(200929..201771)
/locus_tag="Halhy_0177"
/note="COGs: COG0589 Universal stress protein UspA and
related nucleotide-binding protein;
InterPro IPR006016;
KEGG: mtt:Ftrac_3238 UspA domain-containing protein;
PFAM: UspA;
SPTR: Universal stress protein family;
IMG reference gene:2504769529;
PFAM: Universal stress protein family"
/codon_start=1
/transl_table=11
/product="UspA domain-containing protein"
/protein_id="YP_004444963.1"
/db_xref="GI:332662175"
/db_xref="InterPro:IPR006015"
/db_xref="InterPro:IPR006016"
/db_xref="InterPro:IPR014729"
/db_xref="GeneID:10584330"
/translation="MKKILVPTDFSENAQQALDVAVQIAKKIDAEIVLLHVNEQIGAA
LPVSEYYYTYDRTIEEKYLNMVHENLEKMLGDVAARLNAHNIRTAVIGGPFSTIVEDV
VQTEGVDLIIMGTKGASGLKEFFVGSNTEKVVRTAKCPVLTVHDNKTFEFKNVVVPTT
LEADQKKLFESLREWEAIFGGKFHLLYINNPGAYRGDTEIEAREKALVESTGLKDVEI
YKTETFTLNEEQVIFDFAKEKNADLIVMGTHQRRGLAHVLLGSLTEDTINHAAIPVLA
IPLK"
misc_feature complement(200941..201768)
/locus_tag="Halhy_0177"
/note="universal stress protein UspE; Provisional; Region:
PRK11175"
/db_xref="CDD:183015"
misc_feature complement(201340..201765)
/locus_tag="Halhy_0177"
/note="Usp: Universal stress protein family. The universal
stress protein Usp is a small cytoplasmic bacterial
protein whose expression is enhanced when the cell is
exposed to stress agents. Usp enhances the rate of cell
survival during prolonged exposure to...; Region:
USP_Like; cd00293"
/db_xref="CDD:30165"
misc_feature complement(order(201382..201393,201421..201426,
201430..201435,201661..201663,201745..201753))
/locus_tag="Halhy_0177"
/note="Ligand Binding Site [chemical binding]; other site"
/db_xref="CDD:30165"
misc_feature complement(200941..201312)
/locus_tag="Halhy_0177"
/note="Usp: Universal stress protein family. The universal
stress protein Usp is a small cytoplasmic bacterial
protein whose expression is enhanced when the cell is
exposed to stress agents. Usp enhances the rate of cell
survival during prolonged exposure to...; Region:
USP_Like; cd00293"
/db_xref="CDD:30165"
misc_feature complement(order(200983..200994,201022..201027,
201031..201036,201208..201210,201292..201300))
/locus_tag="Halhy_0177"
/note="Ligand Binding Site [chemical binding]; other site"
/db_xref="CDD:30165"
gene complement(201862..202659)
/locus_tag="Halhy_0178"
/db_xref="GeneID:10584331"
CDS complement(201862..202659)
/locus_tag="Halhy_0178"
/note="COGs: COG4221 Short-chain alcohol dehydrogenase of
unknown specificity;
InterPro IPR002198;
KEGG: sli:Slin_2235 short-chain dehydrogenase/reductase
SDR;
PFAM: Short-chain dehydrogenase/reductase SDR;
PRIAM: 3-oxoacyl-[acyl-carrier-protein] reductase;
SPTR: Short-chain dehydrogenase/reductase SDR;
IMG reference gene:2504769530;
PFAM: short chain dehydrogenase"
/codon_start=1
/transl_table=11
/product="3-oxoacyl-ACP reductase"
/protein_id="YP_004444964.1"
/db_xref="GI:332662176"
/db_xref="InterPro:IPR002198"
/db_xref="InterPro:IPR002347"
/db_xref="InterPro:IPR016040"
/db_xref="InterPro:IPR020904"
/db_xref="GeneID:10584331"
/translation="MKKVALVTGASSGLGEALASLLAQKGYIVYGTSRKPTEENRFKL
LIMDVQDEASVQAAVAQILREQGQIDVLINNAGVGIAGPLEVMSINSIQQAFDTNVFG
LIRVIQAVLPSMREAKTGKIINISSIAAEVALPYRAVYSASKAAVDRITEALRLEVER
FGIQVCSIQCGDIQTAITAHRIMEYASDNPAYNTVFAKVAQNMNDGVSKGSTAEYMAT
EIIKLLDKNHLQKIYPIGKSYQKLSLTLKRLLSGRLFEKIIKGYTQS"
misc_feature complement(201880..202656)
/locus_tag="Halhy_0178"
/note="short chain dehydrogenase; Provisional; Region:
PRK06179"
/db_xref="CDD:180445"
misc_feature complement(201949..202653)
/locus_tag="Halhy_0178"
/note="17beta hydroxysteroid dehydrogenase-like, classical
(c) SDRs; Region: 17beta-HSD-like_SDR_c; cd05374"
/db_xref="CDD:187632"
misc_feature complement(order(202129..202137,202141..202143,
202228..202230,202240..202242,202279..202287,
202366..202368,202426..202437,202513..202521,
202558..202560,202618..202629,202633..202635))
/locus_tag="Halhy_0178"
/note="NADP binding site [chemical binding]; other site"
/db_xref="CDD:187632"
misc_feature complement(order(202228..202230,202240..202242,
202279..202281,202363..202365))
/locus_tag="Halhy_0178"
/note="active site"
/db_xref="CDD:187632"
misc_feature complement(order(202075..202077,202084..202086,
202123..202125,202144..202149,202240..202242,
202258..202260,202273..202281))
/locus_tag="Halhy_0178"
/note="steroid binding site; other site"
/db_xref="CDD:187632"
gene complement(202662..203552)
/locus_tag="Halhy_0179"
/db_xref="GeneID:10584332"
CDS complement(202662..203552)
/locus_tag="Halhy_0179"
/note="COGs: COG1250 3-hydroxyacyl-CoA dehydrogenase;
InterPro IPR006176:IPR006108;
KEGG: 3-hydroxybutyryl-CoA dehydrogenase;
PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding;
3-hydroxyacyl-CoA dehydrogenase, C-terminal;
PRIAM: 3-hydroxybutyryl-CoA dehydrogenase;
SPTR: 3-hydroxybutyryl-CoA dehydrogenase;
IMG reference gene:2504769531;
PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain;
3-hydroxyacyl-CoA dehydrogenase, NAD binding domain"
/codon_start=1
/transl_table=11
/product="3-hydroxybutyryl-CoA dehydrogenase"
/protein_id="YP_004444965.1"
/db_xref="GI:332662177"
/db_xref="InterPro:IPR006108"
/db_xref="InterPro:IPR006176"
/db_xref="InterPro:IPR006180"
/db_xref="InterPro:IPR008927"
/db_xref="InterPro:IPR013328"
/db_xref="InterPro:IPR016040"
/db_xref="GeneID:10584332"
/translation="MKNISVVGAGTMGNGIAHLFAQYDHPVTLIDVSEAALEKALTTI
SANLDRMVKKETISTADKDRTLSNIRTVSSLEEGLATAHLVVEAATENSALKLQIFRD
LDVFAPEKAILATNTSSISITQIAAATKRPAQVIGMHFMNPVPLMKLVEVIRGFDTSE
DTTRIIMELSQTLGKVPVEVNDYPGFVANRILMPMINEAIYTLYEGVAGVTEIDTVMK
LGMAHPMGPLQLADFIGLDVCLSILKVLQDGFGQPKYAPCPLLVNMVTAGKLGVKNGE
GFYKYTPGSKELIPARNFTR"
misc_feature complement(202710..203552)
/locus_tag="Halhy_0179"
/note="3-hydroxybutyryl-CoA dehydrogenase; Validated;
Region: PRK05808"
/db_xref="CDD:180269"
misc_feature complement(203007..203546)
/locus_tag="Halhy_0179"
/note="3-hydroxyacyl-CoA dehydrogenase, NAD binding
domain; Region: 3HCDH_N; pfam02737"
/db_xref="CDD:202367"
misc_feature complement(202710..203000)
/locus_tag="Halhy_0179"
/note="3-hydroxyacyl-CoA dehydrogenase, C-terminal domain;
Region: 3HCDH; pfam00725"
/db_xref="CDD:201415"
gene 203700..204434
/locus_tag="Halhy_0180"
/db_xref="GeneID:10584333"
CDS 203700..204434
/locus_tag="Halhy_0180"
/note="KEGG: dia:Dtpsy_2890 protein of unknown function
DUF1282;
SPTR: uncharacterized protein;
IMG reference gene:2504769532"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444966.1"
/db_xref="GI:332662178"
/db_xref="GeneID:10584333"
/translation="MEAKFKLTSLLGLLIGLSLFSCSNAANEKAAREAEKEEDGFHLS
ISTKDGDVKIDASEKGDKKTAKDKDGFHLRISTDEGDTEINGKDLEEEIVKNFDLQIN
GSGKKLDAKVLRSMFPERIGWFKRTEYNFQNALGLMSNAEVEYTKGNQKVAVVVMGGA
LGNIAGAFGDMFEGEFDLKDSDMQQKTGEWNGQKYIEGYNEAEKKAFMQMIIDDRIMV
VVAAENMSAWNFNWWWKRIDWKKLEQ"
gene complement(204447..206549)
/locus_tag="Halhy_0181"
/db_xref="GeneID:10584334"
CDS complement(204447..206549)
/locus_tag="Halhy_0181"
/note="COGs: COG2217 Cation transport ATPase;
InterProIPR006121:IPR008250:IPR005834:IPR006403:IPR
006416:IPR001757;
KEGG: cpi:Cpin_1261 heavy metal translocating P-type
ATPase;
PFAM: ATPase, P-type, ATPase-associated region; Heavy
metal transport/detoxification protein; Haloacid
dehalogenase-like hydrolase;
PRIAM: Copper-exporting ATPase;
SPTR: Heavy metal translocating P-type ATPase;
TIGRFAM: ATPase, P-type, heavy metal translocating;
ATPase, P type, cation/copper-transporter; ATPase, P-type,
K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter;
IMG reference gene:2504769533;
PFAM: E1-E2 ATPase; Heavy-metal-associated domain;
haloacid dehalogenase-like hydrolase;
TIGRFAM: copper-(or silver)-translocating P-type ATPase;
heavy metal translocating P-type ATPase; ATPase, P-type
(transporting), HAD superfamily, subfamily IC"
/codon_start=1
/transl_table=11
/product="heavy metal translocating P-type ATPase"
/protein_id="YP_004444967.1"
/db_xref="GI:332662179"
/db_xref="InterPro:IPR001757"
/db_xref="InterPro:IPR005834"
/db_xref="InterPro:IPR006121"
/db_xref="InterPro:IPR008250"
/db_xref="InterPro:IPR017969"
/db_xref="InterPro:IPR018303"
/db_xref="GeneID:10584334"
/translation="MKPLVELTVEGMDCANCAAGITRYLERKGLEEVYVNFQTKEVRF
RLVDESISLEEAKGGINKLGYTVVEPEQKPDFWTLERKLLIGAIFTLPLLLGHLLMSA
GIHLAFMHNAWIQLAICLPVFVLGAWHFGKSAWSSIRNGMPNMDVLIFMGGTAAFVYS
LVGTLSGETQYIFYETSATIFTLVLLGNWIEKRAVAQTTTAIAELGKLQVEHARRIMP
SGTIVGIHYPEIKTGYILQVNEGDKVPADGEIFLGQASIDESMLTGESLPINKQLGDQ
VIGGSLVLSGNFQLKVNAVGKKSVLGQMIELIKTAQQDKPEIQRLADKISAIFVPVVV
SISALTFLLSYFVFDIAFKNALMNAIAVLVISCPCAMGLATPTAVMVGVGRLARNGIL
VKGGKTLEIFANIRNIVFDKTGTLTTGTFVVEHIDYAPGVREAEVNNLIYDLEMHSSH
PIAKSLVQEMEAQVSLNGQRLGPITLTNVEEEKGKGMSGEDEAGNIYEFGASENGQGT
LILRKNGDKLATLSITDTIKPEAKACIDYLKSKNIASYILSGDKQAKTASVAEALGVT
HFFAEQQPGQKLDIIARLSKEAPTAMVGDGINDAPALAKASIGVSLSNASQAAIQSAQ
IVLLNGNLERLPQALAICTHTVLTIKQSLYWAFAYNIVAIPMAAMGYLNPMWGALFMA
FSDVVVIGNAIRLKYKRI"
misc_feature complement(204456..206537)
/locus_tag="Halhy_0181"
/note="Cation transport ATPase [Inorganic ion transport
and metabolism]; Region: ZntA; COG2217"
/db_xref="CDD:32399"
misc_feature complement(206349..206534)
/locus_tag="Halhy_0181"
/note="Heavy-metal-associated domain (HMA) is a conserved
domain of approximately 30 amino acid residues found in a
number of proteins that transport or detoxify heavy
metals, for example, the CPx-type heavy metal ATPases and
copper chaperones. HMA domain...; Region: HMA; cd00371"
/db_xref="CDD:29471"
misc_feature complement(order(206499..206501,206508..206516))
/locus_tag="Halhy_0181"
/note="metal-binding site [ion binding]"
/db_xref="CDD:29471"
misc_feature complement(205350..206012)
/locus_tag="Halhy_0181"
/note="E1-E2 ATPase; Region: E1-E2_ATPase; pfam00122"
/db_xref="CDD:201018"
misc_feature complement(204720..205031)
/locus_tag="Halhy_0181"
/note="Haloacid dehalogenase-like hydrolases. The haloacid
dehalogenase-like (HAD) superfamily includes L-2-haloacid
dehalogenase, epoxide hydrolase, phosphoserine
phosphatase, phosphomannomutase, phosphoglycolate
phosphatase, P-type ATPase, and many others; Region:
HAD_like; cd01427"
/db_xref="CDD:119389"
misc_feature complement(205023..205031)
/locus_tag="Halhy_0181"
/note="motif I; other site"
/db_xref="CDD:119389"
misc_feature complement(204903..204905)
/locus_tag="Halhy_0181"
/note="motif II; other site"
/db_xref="CDD:119389"
gene complement(206652..207392)
/locus_tag="Halhy_0182"
/db_xref="GeneID:10584335"
CDS complement(206652..207392)
/locus_tag="Halhy_0182"
/note="COGs: COG0605 Superoxide dismutase;
InterPro IPR019831:IPR019832;
KEGG: lby:Lbys_2940 manganese/iron superoxide dismutase;
PFAM: Manganese/iron superoxide dismutase, C-terminal;
Manganese/iron superoxide dismutase, N-terminal;
SPTR: Manganese/iron superoxide dismutase;
IMG reference gene:2504769534;
PFAM: Iron/manganese superoxide dismutases, alpha-hairpin
domain; Iron/manganese superoxide dismutases, C-terminal
domain"
/codon_start=1
/transl_table=11
/product="manganese/iron superoxide dismutase"
/protein_id="YP_004444968.1"
/db_xref="GI:332662180"
/db_xref="InterPro:IPR001189"
/db_xref="InterPro:IPR019831"
/db_xref="InterPro:IPR019832"
/db_xref="InterPro:IPR019833"
/db_xref="GeneID:10584335"
/translation="MDKRNFLRTGLFVAAASLLKPRNVWADRALVPDFDTDEAQQTGP
FTLAPLAFANDALEPHFDKMTMEIHHDRHHNAYVTNLNKAVAGTAFATMSIEQVQSNV
TSKQPAIRNNGGGHFNHTLFWSLLSPQGGGTPTGNVANAISTKYGSFDKFKEIFTAEA
TGRFGSGWAWLSVNSKGEIFISSTPNQDNPLMSKIVKKQAGTPVLGLDVWEHAYYLKY
QNKRADYIKAFWNVLNWAEVEKRYNAAK"
misc_feature complement(206655..207263)
/locus_tag="Halhy_0182"
/note="Superoxide dismutase [Inorganic ion transport and
metabolism]; Region: SodA; COG0605"
/db_xref="CDD:30950"
misc_feature complement(207012..207263)
/locus_tag="Halhy_0182"
/note="Iron/manganese superoxide dismutases, alpha-hairpin
domain; Region: Sod_Fe_N; pfam00081"
/db_xref="CDD:200985"
misc_feature complement(206667..206999)
/locus_tag="Halhy_0182"
/note="Iron/manganese superoxide dismutases, C-terminal
domain; Region: Sod_Fe_C; pfam02777"
/db_xref="CDD:202388"
gene 207662..208096
/locus_tag="Halhy_0183"
/db_xref="GeneID:10584336"
CDS 207662..208096
/locus_tag="Halhy_0183"
/note="COGs: COG2905 signal-transduction protein
containing cAMP-binding and CBS domains;
InterPro IPR000644;
KEGG: meh:M301_2523 signal transduction protein with CBS
domains;
PFAM: Cystathionine beta-synthase, core;
SMART: Cystathionine beta-synthase, core;
SPTR: signal transduction protein with CBS domains;
IMG reference gene:2504769535;
PFAM: CBS domain"
/codon_start=1
/transl_table=11
/product="signal transduction protein with CBS domains"
/protein_id="YP_004444969.1"
/db_xref="GI:332662181"
/db_xref="InterPro:IPR000644"
/db_xref="InterPro:IPR013785"
/db_xref="GeneID:10584336"
/translation="MLSVRRLLDNKKINSVWSVRPDHMVIDALALMSQQGIGAVLVMD
EDQLIGIFSERDYARKGIIVGRKAKSTPVTEVMTANVFTVSPDMDIEDCMTLFSEKRI
RHLPVMENQKVIGMLSIGDIVSAIIQAQDQQIRYLEAYITGQ"
misc_feature 207701..208036
/locus_tag="Halhy_0183"
/note="The CBS domain, named after human CBS, is a small
domain originally identified in cystathionine
beta-synthase and is subsequently found in a wide range of
different proteins. CBS domains usually occur in tandem
repeats. They associate to form a so-called...; Region:
CBS_pair_10; cd04623"
/db_xref="CDD:73122"
misc_feature 207713..208030
/locus_tag="Halhy_0183"
/note="FOG: CBS domain [General function prediction only];
Region: COG0517"
/db_xref="CDD:30863"
gene 208199..209509
/locus_tag="Halhy_0184"
/db_xref="GeneID:10584337"
CDS 208199..209509
/locus_tag="Halhy_0184"
/note="COGs: COG1055 Na+/H+ antiporter NhaD and related
arsenite permease;
InterPro IPR004680;
KEGG: gpb:HDN1F_23920 hypothetical protein;
PFAM: Divalent ion symporter;
SPTR: uncharacterized protein;
IMG reference gene:2504769536;
PFAM: Citrate transporter"
/codon_start=1
/transl_table=11
/product="citrate transporter"
/protein_id="YP_004444970.1"
/db_xref="GI:332662182"
/db_xref="InterPro:IPR004680"
/db_xref="InterPro:IPR018390"
/db_xref="GeneID:10584337"
/translation="MSILIVIVFIIGYTLIALEHPLKLDKAASAMLTGVFCWLVLAYG
FSSMPASAGVTESSTVYLEHQLFEHLGEIAGILFFLLGAMTIVELVDVHDGFRVITDR
ITTTDRIRLIWIISWVTFFLSAALDNMTTAIIMCALLRRLVKKKENAWLLGGFVIMAA
NAGGAWSPIGDVTTIMLWIGGQVSTFTIMKSLFIPSALSLLVPLLMASFYLKGKMESR
EMTDEDLKTSRIFSPWEKQLMFFLGGLALLSVPVFKYYTHFPPYMGILLSLGLLWYIT
EYLHRYREEEIQKEYSVAAMLHRIDTPSILFFLGILLAVGALDASGHLKLAADFLNQT
VGNIYLINTFIGLLSSIVDNVPLVAAAMGMYDLSTYPMDHPFWESLAYCAGTGGSILI
IGSAAGVASMGILKIDFLWYMRHISIYALVGYLCGIGAYYLLSH"
misc_feature 208199..209344
/locus_tag="Halhy_0184"
/note="Na+/H+ antiporter NhaD and related arsenite
permeases [Inorganic ion transport and metabolism];
Region: ArsB; COG1055"
/db_xref="CDD:31255"
misc_feature 208205..209491
/locus_tag="Halhy_0184"
/note="Anion permease ArsB/NhaD. These permeases have
been shown to translocate sodium, arsenate, antimonite,
sulfate and organic anions across biological membranes in
all three kingdoms of life. A typical anion permease
contains 8-13 transmembrane helices...; Region:
ArsB_NhaD_permease; cl15356"
/db_xref="CDD:213135"
misc_feature order(208235..208246,208274..208303,208310..208321,
208421..208423,208424..208471,208538..208543,
208544..208579,208583..208636,208646..208717,
208784..208828,208919..208957,208988..209032,
209096..209152,209207..209254,209327..209386,
209450..209488)
/locus_tag="Halhy_0184"
/note="transmembrane helices; other site"
/db_xref="CDD:29728"
gene 209824..211362
/locus_tag="Halhy_0185"
/db_xref="GeneID:10584338"
CDS 209824..211362
/locus_tag="Halhy_0185"
/note="COGs: COG4770 Acetyl/propionyl-CoA carboxylase
alpha subunit;
InterPro IPR005481:IPR005479:IPR005482;
KEGG: zpr:ZPR_1998 biotin carboxylase;
PFAM: Carbamoyl phosphate synthetase, large subunit,
ATP-binding; Carbamoyl phosphate synthase, large subunit,
N-terminal; Biotin carboxylase, C-terminal;
PRIAM: Pyruvate carboxylase;
SPTR: Acetyl-CoA carboxylase, biotin carboxylase;
IMG reference gene:2504769537;
PFAM: Carbamoyl-phosphate synthase L chain, ATP binding
domain; Biotin carboxylase C-terminal domain;
Carbamoyl-phosphate synthase L chain, N-terminal domain;
TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase
subunit"
/codon_start=1
/transl_table=11
/product="pyruvate carboxylase"
/protein_id="YP_004444971.1"
/db_xref="GI:332662183"
/db_xref="InterPro:IPR005479"
/db_xref="InterPro:IPR005481"
/db_xref="InterPro:IPR005482"
/db_xref="InterPro:IPR011054"
/db_xref="InterPro:IPR011761"
/db_xref="InterPro:IPR011764"
/db_xref="InterPro:IPR013815"
/db_xref="InterPro:IPR013816"
/db_xref="InterPro:IPR013817"
/db_xref="InterPro:IPR016185"
/db_xref="GeneID:10584338"
/translation="MISIIWGERIFFLAYTPQKIDPFMKKILIANRGEIALRVMRSAR
KMGIQTVAVYSEADRNAPHVRFADEAVLLGPAPSNQSYLRGDKIIEIAKTLGVDGIHP
GYGFLSENASFAQAVTDAGMIFIGPTPQAIEVMGSKLAAKETVKAYNIPMVPGVDHSI
SDVEEAKTIAQTVGYPILIKASAGGGGKGMRVVENEEELAEQMTRAISEATSAFGDGS
VFIEKYVTEPRHIEIQVLADAHGNVVHLFERECSIQRRHQKVVEEAPSAVLTPEIRKA
MGEAAVNVARSCQYLGAGTVEFLVDAGLNFYFLEMNTRLQVEHPVTEFITGLDLVEQQ
IRIARGEVLAFTQEDLNINGHAIELRVCAEDPLNNFLPSVGKLQRYRRPSGEHIRVDD
GIEEGMEVPIYYDPLLAKLAVWGVTREAAIKRMLEAISMYQIEGVATTLPFGRFVCQH
DAFISGKFDTGFVKNYYSPEGIQAQQHAEIEVAARLALEVLYHHKRQLMVPDPGGVEW
FTQR"
misc_feature 209893..211221
/locus_tag="Halhy_0185"
/note="acetyl-CoA carboxylase biotin carboxylase subunit;
Validated; Region: PRK08591"
/db_xref="CDD:181492"
misc_feature 209896..210216
/locus_tag="Halhy_0185"
/note="Carbamoyl-phosphate synthase L chain, N-terminal
domain; Region: CPSase_L_chain; pfam00289"
/db_xref="CDD:201133"
misc_feature 210328..210762
/locus_tag="Halhy_0185"
/note="ATP-grasp domain; Region: ATP-grasp_4; cl03087"
/db_xref="CDD:207834"
misc_feature 210895..211212
/locus_tag="Halhy_0185"
/note="Biotin carboxylase C-terminal domain; Region:
Biotin_carb_C; smart00878"
/db_xref="CDD:197946"
gene complement(211553..213070)
/locus_tag="Halhy_0186"
/db_xref="GeneID:10584339"
CDS complement(211553..213070)
/locus_tag="Halhy_0186"
/note="COGs: COG0265 Trypsin-like serine protease
typically periplasmic contain C-terminal PDZ domain;
InterPro IPR001478:IPR001254:IPR011782;
KEGG: rbi:RB2501_06610 serine protease;
PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF;
PRIAM: HtrA2 peptidase;
SMART: PDZ/DHR/GLGF;
SPTR: Serine protease;
TIGRFAM: Peptidase S1C, Do;
IMG reference gene:2504769538;
PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF);
TIGRFAM: periplasmic serine protease, Do/DeqQ family"
/codon_start=1
/transl_table=11
/product="protease Do"
/protein_id="YP_004444972.1"
/db_xref="GI:332662184"
/db_xref="InterPro:IPR001254"
/db_xref="InterPro:IPR001478"
/db_xref="InterPro:IPR001940"
/db_xref="InterPro:IPR009003"
/db_xref="GeneID:10584339"
/translation="MKKILIFSGLISLAVTGTALGIYNFIQNKASIKIEHINSTPAAK
AVYTLNGKGEMVPLDFTQVAAKVMDAVVHIKSTHVRSAANRTAPNPFGDMFPNDDLFN
DFFGKRYQFRPEEIPQQGRKPEVQVGQGSGVIINQDGYIITNNHVIADADDLEVTLHD
NRTYKATVIGTDPSTDLALIQIKEKGLPSLPFVNSDEVKVGEWVMAVGNPFNLTSTVT
AGIVSAKGRNINILKEQFAVESFIQTDAAINPGNSGGALVNLQGGLIGINTAIASPTG
AYSGYGFAVPSNIVSKVVEDLLRFGTVQRGVLGVMIRTVDGNLKKEKNLETTAGAYVD
SLMEKSAAGVAGIKPGDVIVAVNEQKVQSSPELQEAIARHRPGDVVNIKVNRKGQEKE
FKVTLNNRKGNTALVKNDQPEVMDVLGADFETLDSKIAKKLDISGGVKVKALNAGKLR
KSTDMREGFIITKVDGQTVTNVDDLAKILSKKKGGVMLEGVYEDLPGEYYYAFGM"
misc_feature complement(211604..212899)
/locus_tag="Halhy_0186"
/note="periplasmic serine protease, Do/DeqQ family;
Region: degP_htrA_DO; TIGR02037"
/db_xref="CDD:162670"
misc_feature complement(212270..212683)
/locus_tag="Halhy_0186"
/note="Trypsin-like peptidase domain; Region: Trypsin_2;
pfam13365"
/db_xref="CDD:205544"
misc_feature complement(211886..212155)
/locus_tag="Halhy_0186"
/note="PDZ domain of tryspin-like serine proteases, such
as DegP/HtrA, which are oligomeric proteins involved in
heat-shock response, chaperone function, and apoptosis.
May be responsible for substrate recognition and/or
binding, as most PDZ domains bind...; Region:
PDZ_serine_protease; cd00987"
/db_xref="CDD:29044"
misc_feature complement(order(211967..211972,211979..211984,
212135..212137,212141..212152))
/locus_tag="Halhy_0186"
/note="protein binding site [polypeptide binding]; other
site"
/db_xref="CDD:29044"
misc_feature complement(<211616..211822)
/locus_tag="Halhy_0186"
/note="PDZ domain of tryspin-like serine proteases, such
as DegP/HtrA, which are oligomeric proteins involved in
heat-shock response, chaperone function, and apoptosis.
May be responsible for substrate recognition and/or
binding, as most PDZ domains bind...; Region:
PDZ_serine_protease; cd00987"
/db_xref="CDD:29044"
misc_feature complement(order(211643..211648,211655..211660,
211805..211807,211811..211822))
/locus_tag="Halhy_0186"
/note="protein binding site [polypeptide binding]; other
site"
/db_xref="CDD:29044"
gene complement(213183..213635)
/locus_tag="Halhy_0187"
/db_xref="GeneID:10584340"
CDS complement(213183..213635)
/locus_tag="Halhy_0187"
/note="COGs: COG0071 Molecular chaperone (small heat shock
protein);
InterPro IPR002068;
KEGG: cpi:Cpin_6319 heat shock protein HSP20;
PFAM: Heat shock protein Hsp20;
SPTR: Heat shock protein Hsp20;
IMG reference gene:2504769539;
PFAM: Hsp20/alpha crystallin family"
/codon_start=1
/transl_table=11
/product="heat shock protein Hsp20"
/protein_id="YP_004444973.1"
/db_xref="GI:332662185"
/db_xref="InterPro:IPR002068"
/db_xref="InterPro:IPR008978"
/db_xref="GeneID:10584340"
/translation="MALVKSNFAAFPSFPRLFDDFFTRDLFDLGNRGQSFTNTTLPSV
NIVENNESFAVEMAAPGMRKEDFHIQLNNEVLTISSQKENRNEFKENERYTRHEFSYQ
SFERSFHLPKTVVDESKIQAQYENGILRILIPKKEEAKLLPPRTIVVQ"
misc_feature complement(213192..>213542)
/locus_tag="Halhy_0187"
/note="Molecular chaperone (small heat shock protein)
[Posttranslational modification, protein turnover,
chaperones]; Region: IbpA; COG0071"
/db_xref="CDD:30420"
misc_feature complement(213231..213506)
/locus_tag="Halhy_0187"
/note="alpha-crystallin domain (ACD) found in
alpha-crystallin-type small heat shock proteins, and a
similar domain found in p23 (a cochaperone for Hsp90) and
in other p23-like proteins; Region:
alpha-crystallin-Hsps_p23-like; cl00175"
/db_xref="CDD:206879"
gene 213914..215452
/locus_tag="Halhy_0188"
/db_xref="GeneID:10584341"
CDS 213914..215452
/locus_tag="Halhy_0188"
/note="COGs: COG0519 GMP synthase PP-ATPase
domain/subunit;
HAMAP: GMP synthase [glutamine-hydrolyzing];
InterPro IPR000991:IPR018318:IPR001674:IPR004739;
KEGG: chu:CHU_0934 GMP synthase;
PFAM: GMP synthase, C-terminal; Glutamine amidotransferase
class-I, C-terminal; tRNA methyl transferase-like;
PRIAM: GMP synthase (glutamine-hydrolyzing);
SPTR: GMP synthase, large subunit;
TIGRFAM: GMP synthase, C-terminal; GMP synthase,
N-terminal;
IMG reference gene:2504769540;
PFAM: GMP synthase C terminal domain; Glutamine
amidotransferase class-I; NAD synthase;
TIGRFAM: GMP synthase (glutamine-hydrolyzing), C-terminal
domain or B subunit; GMP synthase (glutamine-hydrolyzing),
N-terminal domain or A subunit"
/codon_start=1
/transl_table=11
/product="GMP synthase"
/protein_id="YP_004444974.1"
/db_xref="GI:332662186"
/db_xref="InterPro:IPR000991"
/db_xref="InterPro:IPR001674"
/db_xref="InterPro:IPR014729"
/db_xref="InterPro:IPR017926"
/db_xref="InterPro:IPR022310"
/db_xref="InterPro:IPR022955"
/db_xref="GeneID:10584341"
/translation="MEKILILDFGSQYTQLIARRIRELNVYSEIVPFNKVPHLDDSYK
GVILSGSPFSVTDENALKIDLEPIIGKKPVLGVCYGAQYIAQYYGGQVQRSEKREYGK
AKLHRIFQQDGLLQDVPIDSQVWMSHGDTIMSIPEQFELLAGTESVNVAAFKSKDGAY
AAPVYCIQFHPEVTHSLDGATLLRNFVVNIAGCHGEWTPKSFAEHSVAELKEKIGSEK
VLMALSGGVDSTVAATLLDRAIGDNLICFFVDNGLLRKGEYQQVLDSYEHLGLNVHGI
DAKNHFYEELKGVTNPEAKRKIIGRLFIEVFEAEAAKYPGVKWLGQGTIYPDVIESVS
VHGPSVTIKSHHNVGGLPDKMGLKIVEPLRMLFKDEVRRVGKELEIPVNILQRHPFPG
PGLGIRILGEVNAEKVKLLQDADAIYIDNLRKFGLYDQVWQAGTILLPIQSVGVMGDE
RTYEQAVALRAVNSVDGMTAEWSHLPYEFLAKVSSEIINNVKGINRVVYDISTKPPAT
IEWE"
misc_feature 213914..215449
/locus_tag="Halhy_0188"
/note="GMP synthase; Reviewed; Region: guaA; PRK00074"
/db_xref="CDD:178842"
misc_feature 213923..214474
/locus_tag="Halhy_0188"
/note="Type 1 glutamine amidotransferase (GATase1) domain
found in GMP synthetase; Region: GATase1_GMP_Synthase;
cd01742"
/db_xref="CDD:153213"
misc_feature order(213944..213949,214061..214069,214145..214150,
214292..214294,214421..214423)
/locus_tag="Halhy_0188"
/note="AMP/PPi binding site [chemical binding]; other
site"
/db_xref="CDD:153213"
misc_feature order(214064..214066,214148..214150)
/locus_tag="Halhy_0188"
/note="candidate oxyanion hole; other site"
/db_xref="CDD:153213"
misc_feature order(214145..214147,214421..214423,214427..214429)
/locus_tag="Halhy_0188"
/note="catalytic triad [active]"
/db_xref="CDD:153213"
misc_feature order(214157..214159,214295..214297,214415..214417)
/locus_tag="Halhy_0188"
/note="potential glutamine specificity residues [chemical
binding]; other site"
/db_xref="CDD:153213"
misc_feature 214565..215446
/locus_tag="Halhy_0188"
/note="The C-terminal domain of GMP synthetase. It
contains two subdomains; the ATP pyrophosphatase domain
which closes to the N-termial and the dimerization domain
at C-terminal end. The ATP-PPase is a twisted,
five-stranded parallel beta-sheet sandwiched...; Region:
GMP_synthase_C; cd01997"
/db_xref="CDD:30184"
misc_feature order(214565..214639,214643..214675,214679..214711,
214739..214852,214868..214915,214940..214969,
214982..215056,215072..215116)
/locus_tag="Halhy_0188"
/note="ATP Binding subdomain [chemical binding]; other
site"
/db_xref="CDD:30184"
misc_feature order(214577..214585,214589..214600,214652..214654,
214658..214660,215015..215017)
/locus_tag="Halhy_0188"
/note="Ligand Binding sites [chemical binding]; other
site"
/db_xref="CDD:30184"
misc_feature order(215141..215179,215204..215233,215240..215272,
215282..215329,215348..215374,215378..215446)
/locus_tag="Halhy_0188"
/note="Dimerization subdomain; other site"
/db_xref="CDD:30184"
gene 215508..217013
/locus_tag="Halhy_0189"
/db_xref="GeneID:10584342"
CDS 215508..217013
/locus_tag="Halhy_0189"
/note="COGs: COG0683 ABC-type branched-chain amino acid
transport systems periplasmic component;
KEGG: phe:Phep_0994 hypothetical protein;
SPTR: uncharacterized protein;
IMG reference gene:2504769541;
PFAM: Receptor family ligand binding region"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444975.1"
/db_xref="GI:332662187"
/db_xref="InterPro:IPR001828"
/db_xref="GeneID:10584342"
/translation="MSFILAVVLTGCSFFKPASSTGTTTPDKVPAEYSSTPRQNNPAQ
TGTVSVYDPVKREWVVVQTKPQEKIDTIRWKEGSGAVPITADAARLPVPNSDRGSVPV
IPGVQNNNPNPVSPVNQPGQYRNTSPYNIAVLLPFMSGQGSGSVEGNSVAEWAIQYYG
GLKMALSALDLEGIRLNVSVLDTKADTNEMYRLLRYPDVQNAQLLMGPYRRDNIKIVA
EYAKRSNKPMVSPFSAVGTLTQDNPNYIQMNPSLESHCQALLNHALSEFKPDEIVVVT
RNVVGEQNCLEFLRKAYAPKRALGNPAIQEYFLQGDEKSYGTINLRPYIQNKTQAAII
VPSWADETYIFYLLRAVKSAKANGQKVVVYGMPQWVDFEHMEFDLYEQCQVRVSQVAF
IDDQSPEILNFKKEFFARYAALPNPEAFAGYDQMIYFGRLLANFGPNVKDHLERNQGK
GLHTGFTFTRVVNSVPFGGEQFAPTQRYENQFVHILEFAGYQFRPLPVIPR"
misc_feature 215889..216785
/locus_tag="Halhy_0189"
/note="ABC-type branched-chain amino acid transport
systems, periplasmic component [Amino acid transport and
metabolism]; Region: LivK; COG0683"
/db_xref="CDD:31027"
misc_feature 215898..216812
/locus_tag="Halhy_0189"
/note="Periplasmic binding domain of ATP-binding cassette
transporter-like systems that belong to the type I
periplasmic binding fold protein superfamily; Region:
PBP1_ABC_transporter_LIVBP_like; cd06268"
/db_xref="CDD:107263"
misc_feature 216201..216206
/locus_tag="Halhy_0189"
/note="ligand binding site [chemical binding]; other site"
/db_xref="CDD:107263"
gene 217177..217806
/locus_tag="Halhy_0190"
/db_xref="GeneID:10584343"
CDS 217177..217806
/locus_tag="Halhy_0190"
/note="COGs: COG0566 rRNA methylase;
InterPro IPR001537;
KEGG: cpi:Cpin_1972 tRNA/rRNA methyltransferase (SpoU);
PFAM: tRNA/rRNA methyltransferase, SpoU;
SPTR: tRNA/rRNA methyltransferase (SpoU);
IMG reference gene:2504769542;
PFAM: SpoU rRNA Methylase"
/codon_start=1
/transl_table=11
/product="tRNA/rRNA methyltransferase SpoU"
/protein_id="YP_004444976.1"
/db_xref="GI:332662188"
/db_xref="InterPro:IPR001537"
/db_xref="GeneID:10584343"
/translation="MEASREQKIRQLAQNRQFDLTVILENVDDPHNVGAVLRSCDSVG
IREIFVLYTRPGLQNHKLELGKRTSAGSRKWIDVYLYREVDACMEHVRRNYQRVYATH
LAHDAKSLYELDLAQSAALMFGNEADGLSELALSQADGNFIIPQVGMAQSLNVSVACA
VSLYEAFRQRSAKGLYGVGNPASTDQQAALLEDYFRRQEDLEEAWKTTK"
misc_feature 217231..217668
/locus_tag="Halhy_0190"
/note="SpoU rRNA Methylase family; Region: SpoU_methylase;
pfam00588"
/db_xref="CDD:201328"
gene 217882..218499
/locus_tag="Halhy_0191"
/db_xref="GeneID:10584344"
CDS 217882..218499
/locus_tag="Halhy_0191"
/note="COGs: COG0009 translation factor (SUA5);
InterPro IPR006070:IPR004388;
KEGG: mtt:Ftrac_1708 translation factor SUA5;
PFAM: Sua5/YciO/YrdC, N-terminal;
SPTR: Translation factor SUA5;
TIGRFAM: Sua5/YciO/YrdC/YwlC;
IMG reference gene:2504769543;
PFAM: yrdC domain;
TIGRFAM: Sua5/YciO/YrdC/YwlC family protein"
/codon_start=1
/transl_table=11
/product="Sua5/YciO/YrdC/YwlC family protein"
/protein_id="YP_004444977.1"
/db_xref="GI:332662189"
/db_xref="InterPro:IPR006070"
/db_xref="InterPro:IPR017945"
/db_xref="GeneID:10584344"
/translation="MLLKINADNPEGRKINQVIEKLNEGGIIIYPTDTVYGLGCDINN
QAAVEKICRLRRLDPKDAMLAIICKDISQVQEFTQQIDNPTFKLLKRNLPGAFTFILP
AAGSVPKMFRNRKKTIGIRIPDHNIPLQLVEGLGRPILTTSLKSDDEILEYFTDPELI
YEDFQKLVDIVIDSGNGGNTPSTVVDCTQEKPIVLRLGAGMLEFS"
misc_feature 217939..218475
/locus_tag="Halhy_0191"
/note="Telomere recombination; Region: Sua5_yciO_yrdC;
pfam01300"
/db_xref="CDD:201719"
gene 218535..220853
/locus_tag="Halhy_0192"
/db_xref="GeneID:10584345"
CDS 218535..220853
/locus_tag="Halhy_0192"
/note="InterPro IPR012910;
KEGG: srm:SRM_02396 outer membrane protein probably
involved in nutrient binding;
PFAM: TonB-dependent receptor, plug;
SPTR: TonB dependent receptor;
IMG reference gene:2504769544;
PFAM: TonB-dependent Receptor Plug Domain"
/codon_start=1
/transl_table=11
/product="TonB-dependent receptor plug"
/protein_id="YP_004444978.1"
/db_xref="GI:332662190"
/db_xref="InterPro:IPR008969"
/db_xref="InterPro:IPR012910"
/db_xref="InterPro:IPR014766"
/db_xref="GeneID:10584345"
/translation="MRILLCLHLLLLSSFLLAQNATLRGNVYDEETGNPIGFASISLV
NNPGQGAITDVNGFFSIANLAPGKYQINISYLGYESASFERELSAGNITYQRFLLKPT
AIELEGVDISGRRSQARSQVQISKLTVSPKQIRSLPSTGGESDVAQYLTVLPGVVSSG
DQGGQLYIRGGSPVQNKMLLDGMIIYNPFHSIGLFSVFETETIRNMDVYTGGYNAEYG
GRISAVVDIKTREGNRKRLSGLVSASPFQAKALIEGPIKPLKNENGGSISFMFTGKHS
LIDRTSPSLYSYAVDSNYYSFAQKDTSLSVAKSLPFRYTDLYGKVSFNADNGSKLDVF
GFNFTDQFNFAGLAKLDWSSTGGGGNFTLIPTNSNVVLNGVVGFSNYNIALLEKDGGP
RQSGITTYNANLNFTYYGDHNQLNYGFEFVGLNTDFRFRNLVGLTFAQEDFTSELAGY
AKFRQELKNLVLEPGFRVHYYASQSRMSLEPRFGLKYNATPFLRFKAAGGIYAQNLVS
TVNDLDVVNFFVGFLAGPEESLFKPNTREPVDHRLQKAWHAVTGVELDLGKYLEFNVE
PYWKQFTQLININRNKLNAQDPNYVTETGEAYGIDFTLRYSKGNVYCWGTYSYAKVNR
NDGIQEYPPIFDRRHNINLLSTYRFGGQKQWEASARWNIGSGFPFTQTRGFYQDNPYG
QLLQTNVLTGNFPLGILLTDEINGGRLSWFHRLDASLKYTAKFSRFAALELTASVTNV
YNRENVFYVDRITNRRVNQLPVLPSLAAAVRF"
misc_feature 218598..218867
/locus_tag="Halhy_0192"
/note="Cna protein B-type domain; Region: Cna_B_2;
pfam13715"
/db_xref="CDD:205890"
misc_feature 218916..219209
/locus_tag="Halhy_0192"
/note="TonB-dependent Receptor Plug Domain; Region: Plug;
pfam07715"
/db_xref="CDD:203737"
gene complement(220930..223299)
/locus_tag="Halhy_0193"
/db_xref="GeneID:10584346"
CDS complement(220930..223299)
/locus_tag="Halhy_0193"
/note="KEGG: cpi:Cpin_2962 hypothetical protein;
SPTR: uncharacterized protein;
IMG reference gene:2504769545"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444979.1"
/db_xref="GI:332662191"
/db_xref="InterPro:IPR000601"
/db_xref="GeneID:10584346"
/translation="MKNWLITLLCFCFFALGFGELNAQIGRIKIRPDVDTTYVCPDSS
ITLEVTGGFNYSWSPANILNRSNGNVVVAKPTQNTRIFVEGFVNGQLRRDTITLVVVR
PQLQLIALNASSVCRGTPVLLRAVNNAGGQGITWDPVEGLNNPNAANVIALPENTTTY
RAELDITGCKADATITVTIAPQKIDITNGDTVKVCKGATKVKLSATTNTGQATGVTWT
AKDRSITRQNVLSIDVEPKITTTYYVTMVATPCTIVDSVVVKVDSLPTQTITIDPKKE
VYCFGEIITLKSETYETAAYPDIKHLWRPRFRADGSTPGYDFQTPDTLWNMVMGTIDS
VVLIRDTRNNGCIDSAAIFVPVIKPKTITITPEPAEVCPGGSIRLNAEFAGNFDKITW
TPTAGLSCTDCKNPNVTPGQTTTYNIMVEEKNCPSSASKTVTVLPRAAILFPNLRTVC
QGGSIQLNGASQSGVTYRWTQGGNVISTDPLHRVTPTATTTYRLEATDVVKGCNNSGD
ITINVVPTVNSVDINGVTVCSNDRNRTPLSIRVNPSPGTVPALFETYNWQIAGSTVSS
ATTLGINNLNQNTLVNVTYTYGVVGGATCGRLTDTATVKVIQMPTENGIFFAPDSVGT
RGAQEGDPLTAGILLVQPQPPVALTYNWTINGNNPGNNTNPTIVTRASPGAMTFKVVV
TGPNGCAITKELTINVVPASVTIPNAFSPNGDGANDIFRPVTNNKNIRLVELKVFNRW
GKMVYNGNTGWNGNVGGNPAPIDVYIYNMVIEFPGGRRETRSGDVALLR"
misc_feature complement(220951..221193)
/locus_tag="Halhy_0193"
/note="C-terminal domain of CHU protein family; Region:
CHU_C; pfam13585"
/db_xref="CDD:205763"
gene complement(223485..223880)
/locus_tag="Halhy_0194"
/db_xref="GeneID:10584347"
CDS complement(223485..223880)
/locus_tag="Halhy_0194"
/note="InterPro IPR003088;
KEGG: sli:Slin_1300 cytochrome c class I;
PFAM: Cytochrome c, class I;
SPTR: Cytochrome c class I;
IMG reference gene:2504769546;
PFAM: Cytochrome c"
/codon_start=1
/transl_table=11
/product="cytochrome c class I"
/protein_id="YP_004444980.1"
/db_xref="GI:332662192"
/db_xref="InterPro:IPR003088"
/db_xref="InterPro:IPR009056"
/db_xref="GeneID:10584347"
/translation="MYRYILFAQLLALLFILACQGSPYKQGEIMYGNFCASCHMDDGS
GLRGRIPPLANSDYLKKYPSELACIIRYGKTGEIEVNGKKYQEPMPGVPQLTDFEIAN
IINYINQAWGNESAYVPVQKVQQALEKCK"
misc_feature complement(223560..223808)
/locus_tag="Halhy_0194"
/note="Cytochrome C oxidase, cbb3-type, subunit III;
Region: Cytochrome_CBB3; pfam13442"
/db_xref="CDD:205620"
misc_feature complement(223506..>223805)
/locus_tag="Halhy_0194"
/note="Cytochrome c, mono- and diheme variants [Energy
production and conversion]; Region: CccA; COG2010"
/db_xref="CDD:32193"
gene complement(223916..224788)
/locus_tag="Halhy_0195"
/db_xref="GeneID:10584348"
CDS complement(223916..224788)
/locus_tag="Halhy_0195"
/note="COGs: COG3016 Uncharacterized iron-regulated
protein;
InterPro IPR007314;
KEGG: sli:Slin_6096 protein of unknown function DUF399;
PFAM: Protein of unknown function DUF399;
SPTR: uncharacterized protein;
IMG reference gene:2504769547;
PFAM: Protein of unknown function, DUF399"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444981.1"
/db_xref="GI:332662193"
/db_xref="InterPro:IPR007314"
/db_xref="GeneID:10584348"
/translation="MKPIFCICLLSLATLVATAQDKPAYRLFDQSGKEVSYGQMLKNS
KKADVVFFGEQHNNPISHWLQIELAQDLEKESNGRLIMGAEMFERDNQSILTEYLNGQ
INTKSFEEEARVWDNYATDYKPLVELAKSKKLPFIATNVPRRYANMVYKQGIESLNPL
TSEAKSWIAPLPIEVDMNLPSYQAMAKMMGGHGGEAATTNLVKSQAVKDATMGYFIAQ
NLKKGHVFLHFNGAYHSDLKEGTVWYVRKYAPGKDMVTISTVEQDNIDKLDEENLKKA
DFIICVPAKMTKTY"
misc_feature complement(224048..224686)
/locus_tag="Halhy_0195"
/note="Protein of unknown function, DUF399; Region:
DUF399; pfam04187"
/db_xref="CDD:146695"
gene complement(224827..225246)
/locus_tag="Halhy_0196"
/db_xref="GeneID:10584349"
CDS complement(224827..225246)
/locus_tag="Halhy_0196"
/note="COGs: COG1186 Protein chain release factor B;
InterPro IPR000352;
KEGG: phe:Phep_1191 class I peptide chain release factor;
PFAM: Class I peptide chain release factor;
SPTR: Class I peptide chain release factor;
IMG reference gene:2504769548;
PFAM: RF-1 domain"
/codon_start=1
/transl_table=11
/product="class I peptide chain release factor"
/protein_id="YP_004444982.1"
/db_xref="GI:332662194"
/db_xref="InterPro:IPR000352"
/db_xref="GeneID:10584349"
/translation="MDTLQIQKELKFRTSRSSGSGGQNVNKVETRVEALFEVNTSEGL
NEEEKAIVAAKLASRISKEGLLSAVSQESRTQQSNREKAIKKLLTLLETALIPEPERE
EVPERLVANPRKRKKAKAVQSEKKAARKKIIPPKEED"
misc_feature complement(<224890..225246)
/locus_tag="Halhy_0196"
/note="hypothetical protein; Provisional; Region:
PRK09256"
/db_xref="CDD:181730"
gene complement(225414..226082)
/locus_tag="Halhy_0197"
/db_xref="GeneID:10584350"
CDS complement(225414..226082)
/locus_tag="Halhy_0197"
/note="KEGG: sli:Slin_2263 hypothetical protein;
SPTR: uncharacterized protein;
IMG reference gene:2504769549"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444983.1"
/db_xref="GI:332662195"
/db_xref="GeneID:10584350"
/translation="MKKVFNLTAWLIVLIPLTMQAQNLQENERTMSQGSKPGFSMNID
DISTKEVERLWIEYLKDTKAKTKKDRKTDEVFADDASVPAISSNLMDVYATFTERGKQ
TEMVVWVDLGGAFLGRRQHPEKIDAFEQWMTEFGRRTRVRKVEIELESEELIFKDQKK
EFDKLIKEEERLKKEITDAEQRINQAKKELEINAANQSNRRQEMERQQIKIQEVETKK
KRIE"
gene complement(226241..227782)
/locus_tag="Halhy_0198"
/db_xref="GeneID:10584351"
CDS complement(226241..227782)
/locus_tag="Halhy_0198"
/note="COGs: COG4799 Acetyl-CoA carboxylase
carboxyltransferase component (subunits alpha and beta);
InterPro IPR000022;
KEGG: lby:Lbys_1917 carboxyl transferase;
PFAM: Carboxyl transferase;
PRIAM: Propionyl-CoA carboxylase;
SPTR: Carboxyl transferase;
IMG reference gene:2504769550;
PFAM: Carboxyl transferase domain"
/codon_start=1
/transl_table=11
/product="propionyl-CoA carboxylase"
/protein_id="YP_004444984.1"
/db_xref="GI:332662196"
/db_xref="InterPro:IPR000022"
/db_xref="InterPro:IPR011762"
/db_xref="InterPro:IPR011763"
/db_xref="GeneID:10584351"
/translation="MNDKLFTLEQKIAEAQLGGGQQRIDAQHKKGKLTARERIHFLLD
PGSFEEIGMLVQHRCRDFGMEQQHFLGDGVITGYGTIDGRLVYVFSQDFTVFGGSLSE
AHAEKICKIMDLAMRNGAPMIGLNDSGGARIQEGVASLGGYADIFYRNVMASGVVPQI
SAIMGPCAGGAVYSPAMTDFIIMVEDTSYMFVTGPNVVKTVTNEDVTSEELGGASAHS
TKSGVTHLTATNDIECLEKVRRLVSYMPQNCEEKPSLKPYDLTEEWREELRHIVPENA
NQPYDMRDVINGIVDEDSFMEIHEAFAENIVVGFARLAGRSIGVIANQPMNLAGVLDV
NSSRKGARFVRFCDSFNIPLLVLVDVPGFLPGTDQEWNGIIVNGAKLLYAFSEATVPR
ITLITRKAYGGAYDVMNSKHIGADLNYAWPAAEIAVMGAKGASEIIFRKEIIEAEDPE
AMLLQKEKEYQEAFAHPYQAAERGYIDEVIDPCLTRRKLIKAFASIENKVLHLPRKKH
GNIPL"
misc_feature complement(226244..227776)
/locus_tag="Halhy_0198"
/note="methylmalonyl-CoA decarboxylase alpha subunit;
Region: mmdA; TIGR01117"
/db_xref="CDD:130187"
misc_feature complement(<227180..227686)
/locus_tag="Halhy_0198"
/note="Acetyl co-enzyme A carboxylase carboxyltransferase
alpha subunit; Region: ACCA; cl15772"
/db_xref="CDD:210172"
misc_feature complement(226340..227119)
/locus_tag="Halhy_0198"
/note="Acetyl co-enzyme A carboxylase carboxyltransferase
alpha subunit; Region: ACCA; cl15772"
/db_xref="CDD:210172"
gene 228062..229270
/locus_tag="Halhy_0199"
/db_xref="GeneID:10584352"
CDS 228062..229270
/locus_tag="Halhy_0199"
/note="COGs: COG0436 Aspartate/tyrosine/aromatic
aminotransferase;
InterPro IPR004839;
KEGG: lby:Lbys_2637 aminotransferase class I and II;
PFAM: Aminotransferase, class I/II;
PRIAM: Aspartate transaminase;
SPTR: Aminotransferase class I and II;
IMG reference gene:2504769551;
PFAM: Aminotransferase class I and II"
/codon_start=1
/transl_table=11
/product="aspartate transaminase"
/protein_id="YP_004444985.1"
/db_xref="GI:332662197"
/db_xref="InterPro:IPR001176"
/db_xref="InterPro:IPR004838"
/db_xref="InterPro:IPR004839"
/db_xref="InterPro:IPR015421"
/db_xref="InterPro:IPR015422"
/db_xref="InterPro:IPR015424"
/db_xref="GeneID:10584352"
/translation="MSVATTSRLSQRVMQMAESETLKMAAMARELKSQGHNVINLSLG
EPDFDTPVHIKEAAKKALDEGITKYTPVAGLQELREAIKVKFKRDNNLDYNLNQIVVS
NGAKQSLANIFLSILDPGDEVIILAPYWVSYSAIVELAEGKSVILKSSFEQDYKVPAA
EIAAAITDRTKAIVFSSPSNPTGMVYSYEELKAIADVLAQHPDIIIVSDEIYEYINFG
EKHVSIGAFDQVKDQTVTVNGFAKGFAMTGWRLGYIGAPAWLAEACVKVQGQVTSGAN
SFSQKAAAFALLGDMNPTYDMREAFLKRRDLIISGLSKIPGFKVNKPQGAFYIFPDIS
AYFGTSDGTNTINDANDFCDYLMMKAHVATVSGAAFGADTCFRISYAASEEELNEAIK
RIAEGVSKLR"
misc_feature 228077..229267
/locus_tag="Halhy_0199"
/note="aspartate aminotransferase; Provisional; Region:
PRK05764"
/db_xref="CDD:180244"
misc_feature 228176..229249
/locus_tag="Halhy_0199"
/note="Aspartate aminotransferase family. This family
belongs to pyridoxal phosphate (PLP)-dependent aspartate
aminotransferase superfamily (fold I). Pyridoxal phosphate
combines with an alpha-amino acid to form a compound
called a Schiff base or aldimine...; Region: AAT_like;
cd00609"
/db_xref="CDD:99734"
misc_feature order(228371..228379,228449..228451,228599..228601,
228695..228697,228776..228778,228782..228787,
228809..228811)
/locus_tag="Halhy_0199"
/note="pyridoxal 5'-phosphate binding site [chemical
binding]; other site"
/db_xref="CDD:99734"
misc_feature order(228380..228382,228479..228481,228674..228676,
228803..228811,228896..228898,228905..228907)
/locus_tag="Halhy_0199"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:99734"
misc_feature 228785..228787
/locus_tag="Halhy_0199"
/note="catalytic residue [active]"
/db_xref="CDD:99734"
gene 229303..229821
/locus_tag="Halhy_0200"
/db_xref="GeneID:10584353"
CDS 229303..229821
/locus_tag="Halhy_0200"
/note="IMG reference gene:2504769552"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444986.1"
/db_xref="GI:332662198"
/db_xref="GeneID:10584353"
/translation="MLASLSRLEELYCSLDTTEIQAHFTFSQTLKQLLIMYRNFLFVA
IIGMIAISPSFAQVDVKVGPLGPLFGTLNLRSEFGLADNFGLEATVGGSWNKINFDEG
EDLKNTTLRFGVNGRYYFNPSDIGLDKFYLGLYSRYSSGKARGTGENSDEYNTNRFSG
GFPGWIQNLLAQ"
misc_feature 229420..>229788
/locus_tag="Halhy_0200"
/note="Protein of unknown function (DUF3575); Region:
DUF3575; pfam12099"
/db_xref="CDD:152534"
gene complement(230029..230808)
/locus_tag="Halhy_0201"
/db_xref="GeneID:10584354"
CDS complement(230029..230808)
/locus_tag="Halhy_0201"
/note="InterPro IPR010496;
KEGG: sli:Slin_3370 protein of unknown function DUF1080;
PFAM: Protein of unknown function DUF1080;
SPTR: uncharacterized protein;
IMG reference gene:2504769553;
PFAM: Domain of Unknown Function (DUF1080)"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444987.1"
/db_xref="GI:332662199"
/db_xref="InterPro:IPR010496"
/db_xref="GeneID:10584354"
/translation="MIAKSTVTTAKLFLALLCLLQGFNTLHSQVGLKPEKGAKVYFNG
SRKSLDKNWTYWNGPRLAATLPIKWTIVKDPVDGGTAVNSNDPTAAGGKYGSADIVTK
KAFRDFRLHVEFFISEKGGNSGVYLQNRYEIQVLDGDSTKHGMAAVINESESPYHAYN
GVGKWNAYDITFRAARFTDGKLTEKALVTMYFNGKKVHVNRRIQQVWGGPNSGIDGGN
DGGKGITDVPGGLKLQAEGHNVLYRNIWIKELDLKEANTDF"
misc_feature complement(230065..230700)
/locus_tag="Halhy_0201"
/note="Domain of Unknown Function (DUF1080); Region:
DUF1080; pfam06439"
/db_xref="CDD:203451"
gene complement(230972..233917)
/locus_tag="Halhy_0202"
/db_xref="GeneID:10584355"
CDS complement(230972..233917)
/locus_tag="Halhy_0202"
/note="COGs: COG0612 Zn-dependent peptidase;
InterPro IPR011765:IPR007863;
KEGG: cpi:Cpin_0913 peptidase M16 domain protein;
PFAM: Peptidase M16, C-terminal; Peptidase M16,
N-terminal;
SPTR: Peptidase M16 domain protein;
IMG reference gene:2504769554;
PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase
M16)"
/codon_start=1
/transl_table=11
/product="peptidase M16 domain-containing protein"
/protein_id="YP_004444988.1"
/db_xref="GI:332662200"
/db_xref="InterPro:IPR001431"
/db_xref="InterPro:IPR007863"
/db_xref="InterPro:IPR011237"
/db_xref="InterPro:IPR011249"
/db_xref="InterPro:IPR011765"
/db_xref="GeneID:10584355"
/translation="MKRSIFLLALLLSSVLTQLWAKPPKFEWKQATANGYTYRYVAND
PMQTRFYTLKNGLTVILSPNKKEPRIRTLIAVRAGSNTDPATNTGLAHYLEHLLFKGT
DKIGSLDWAKEKPLLDQIDALYEQYNKTTDPDKRAEIYREIDKVSGEAAKFAIANEYD
KTMKNMGSVGTNAHTSVEETVYEEDIPSNAIDRFLTLQAERFRKPIFRIFHTELEAVY
EEKNRTLDEDPRKILYASLSGVFPSHNYGQQTTIGTIEHLKNPSLVEIRNYYNKYYVA
NNMAFIFAGDFNPDEVIKKIDQKFGFLPNKPVPEYKPVPEKPLLGETVKEVWGPSAES
VRINFRMPGEWDVKSSVLLTLCDEILSNAQAGLIDLNLNKAQKIQGGGSSNYRFKDYS
VEFLFGTPKQGQSLEEVKNLLMAQLDKLKKGEFEEWLIKAIVANYKLNALRNLENNDD
RANRLSDIFIRNKGQLWADEVAKLDAMGLVSKQQVVDFAKKHFSAGYVVVYKRQGEDK
SAQKVQKPTITPVAVNKDAQSPLFKEINQMPLSPIAPAWMDYQKDFQRDQIKGAEFFY
VQNKDDEQYRLSMRFEMGTWSNKLLPLAAQYLQLASTDKYTADQFSQELFKTATAYNF
TPGQEFTTLTLSGLQEHLGAGLALVEELIRNCKADEQVWNNLKARLLKSRKDAKSNKN
AIRAAVRTYAQYGAKNPFNHVLSDAEINALKAEDLVNLLKDLFNHKHQIIYYGPKTLA
EIKPMLEKAHALPASFKANPAKVNYAKITQDKPQVLFANYDMVQTEIDWIRNTEMYNP
QLAPTLNVFNNYFGAGGFSCLVVQTLRESKALAYATQAYYAPPGKKDERYTMQAYIQT
QADKFKEAVEGMNELLNELPESEGFLTSAKTAIKNGIETDRTKGDDIVFSYLAAQLRG
VDHDDRKHTYEKASSIAYNDLKAFHAANISNKAYTLCVLGSDKRLKMEDLKAYGEVKT
MSLEELFGY"
misc_feature complement(232415..233800)
/locus_tag="Halhy_0202"
/note="Predicted Zn-dependent peptidases [General function
prediction only]; Region: PqqL; COG0612"
/db_xref="CDD:30957"
misc_feature complement(<233237..233743)
/locus_tag="Halhy_0202"
/note="Insulinase (Peptidase family M16); Region:
Peptidase_M16; pfam00675"
/db_xref="CDD:201385"
misc_feature complement(232607..233125)
/locus_tag="Halhy_0202"
/note="Peptidase M16 inactive domain; Region:
Peptidase_M16_C; pfam05193"
/db_xref="CDD:203199"
misc_feature complement(231029..232114)
/locus_tag="Halhy_0202"
/note="Predicted Zn-dependent peptidases [General function
prediction only]; Region: PqqL; COG0612"
/db_xref="CDD:30957"
misc_feature complement(231251..231787)
/locus_tag="Halhy_0202"
/note="Peptidase M16 inactive domain; Region:
Peptidase_M16_C; pfam05193"
/db_xref="CDD:203199"
gene complement(234014..234649)
/locus_tag="Halhy_0203"
/db_xref="GeneID:10584356"
CDS complement(234014..234649)
/locus_tag="Halhy_0203"
/note="InterPro IPR003111;
KEGG: sli:Slin_5613 peptidase S16 lon domain protein;
PFAM: Peptidase S16, lon N-terminal;
SMART: Peptidase S16, lon N-terminal;
SPTR: Peptidase S16 lon domain protein;
IMG reference gene:2504769555;
PFAM: ATP-dependent protease La (LON) domain"
/codon_start=1
/transl_table=11
/product="peptidase S16 lon domain-containing protein"
/protein_id="YP_004444989.1"
/db_xref="GI:332662201"
/db_xref="InterPro:IPR003111"
/db_xref="InterPro:IPR015947"
/db_xref="GeneID:10584356"
/translation="MEFVLLPQFPLQIVVYPNENLNLHIFEPRYRQLIKESEEKGTTF
GIPTFLNNRVMPIGTEIQLLTVEKQHDGGEMDIKTKGISVYRMEQFINPVPGKLYAGA
TIVRIETDLEYDWALNEKILGYLIELFDLLNIDKPLPDGPSDFVTYDVAHHAGMSTEQ
EYELLTMLTEKERQTFLIQHLEQFLPMVKEMRNLQQRALLNGHFKDLKPLL"
misc_feature complement(234101..234634)
/locus_tag="Halhy_0203"
/note="ATP-dependent protease La (LON) domain; Region:
LON; pfam02190"
/db_xref="CDD:202145"
gene 234854..240463
/locus_tag="Halhy_0204"
/db_xref="GeneID:10584357"
CDS 234854..240463
/locus_tag="Halhy_0204"
/note="COGs: COG2373 Large extracellular alpha-helical
protein;
InterPro IPR002890:IPR011625;
KEGG: cpi:Cpin_0163 alpha-2-macroglobulin domain protein;
PFAM: Alpha-2-macroglobulin, N-terminal;
Alpha-2-macroglobulin, N-terminal 2;
SPTR: Alpha-2-macroglobulin domain protein;
IMG reference gene:2504769556;
PFAM: Alpha-macro-globulin thiol-ester bond-forming
region; MG2 domain; Alpha-2-macroglobulin family;
Alpha-2-macroglobulin MG1 domain; Alpha-2-macroglobulin
family N-terminal region"
/codon_start=1
/transl_table=11
/product="alpha-2-macroglobulin"
/protein_id="YP_004444990.1"
/db_xref="GI:332662202"
/db_xref="InterPro:IPR001599"
/db_xref="InterPro:IPR002890"
/db_xref="InterPro:IPR008930"
/db_xref="InterPro:IPR011625"
/db_xref="InterPro:IPR019565"
/db_xref="InterPro:IPR021868"
/db_xref="GeneID:10584357"
/translation="MSMLNAKALRPLVLGTTTVVLFLALLSTGCRKNKDISTLAAENP
FVYAYTSGVISKTDPIRVRFAQNVANSDEIGKEAPAILSISPNIKGKLTWEDANTLRL
DPNQDLVSGTTYDVSVNVKQVIQDAKGENANFAFQFHTREQHYQVELEGMRSASATDY
SKQSLKGTVYTSDVAENTEVEKMLNAQQDGGKLNVQWNHSTDQLVHYFTVKSVNRGQQ
PSEVKLAYDGNSIGVKNDKSETYKIPAVGSFTAMDADAVQIPEQYIRITFSDPLNKSQ
NLDGLISIDEYEGTLRYIIEDNTVRVYPDKTLDGSYRVRIAPGVENTKGNTFVETTIW
DVTFEEIKPGVRLVGKGVILPNSEGLMFPFESAGLKSVDIEVFKIYNNNILQFLQDNS
LDGEYDLYKVGRIVLQKKVNLQTLSPNAKAGRWSRYAIDLGKLIKADEQAIYQVRIGF
RSEYAAIGCMADANANGLGGDPFSRTGEDEDEPLESIMDNYYGYEGYYDDYEYENRDD
PCTKEYYNSDHFVQRNVISSNLGLIAKKGGNRKLMVIVSDLRSTDPISGAQVEVFDRQ
NQSIGKGSSNGDGIADVAYKGNPFVAIVTHSGQRGYIRLEDGESLSLSKFDVAGSVTQ
KGLKGLLYGERGVWRPGDSVYLNFMIEDREKRLPENYPITMELYNARGQLQEKRTSSK
TVGGIYPLYFATSPDAPTGNWRVKVKAGGAIFEKILKIETVKPNRIKVDLNTGSGNEL
QAEDGKMNARLQADWLTGSPASGLKAIVEVQLREASTGFPKYPSYIFDDPARKLTKTE
PRVIFDNVLDGEGKANISTTLLEEDLAPGMLTASFQTRVFEKGGDFSTDNVSVKYSPY
SSYAGMEIPKNKYGSPQFEVGKNNTIRLVDVDKNGKPVSGRRLSIGLYKVEWRWWWDQ
YQENEANYNSGEHVGAVQTAAVNTNAKGEASWSFKTSTWGRYMIRVCDAESGHCTGGF
IYIGTPWYEGDDMDDNFREAAAMLSFQADKEKYNVGETVTLTIPGGKNGRVLVSLETG
TKILQTFWAKSVEGENKITFKTTPDMSPTVYANVALIQPHGQVANDLPIRLYGITPIQ
IENAETLLSPTIESPAEFRPETTVSVSVGEKSGKAMAYSLAVVDEGLLGLTRFKTPNP
HDVFYAREALGVQTWDIYDKVLGAFAGEMEGILSIGGDGAIDPGALNNTANRFKPMVV
CLGPFELAKGRTNKHQIKIPNYIGAVRVMVVAAKDNAYGAADKSVPVRNPLMVRSTLP
RVISPGDQFELPVNVFVTDAKISNVQVKVSESSGLVSIEDGDQSMSFSRNNTDQITGF
KIKVKDRTGIAKFKIMATGGGASSAEEIEIDVRNPNPFQTKVFAEVVEPGKSWEQAIE
VFGSAGTRSTMLEVSNVPPLNLGERLGYLLSYPYGCIEQTISAAFPQLFVSNLMELDE
KRQKEVATNIKAAIERVKTFQTNEGGFTYWPGNGTPDHWSTSYVGHFLVEAKAKGYDV
PQNLIKDWSKFQKKVARMWDSKLPAYGFWSIEGHELSQAYRLYTLALAGEADMASMNR
LRENPKINLAARWRLAAAYALAGKPEVAKELIQDKPTEVAEYTEMSYTYGSGMRDRAM
ILETLVLLKDMKKAGALVQYLSQGLSSQRWYSTQTVAYTLMAVSKYLGDQKATQTFSF
SYAVSGGQSTSANSKSAIMQINLPAGGSNTSLTVKNTSKAKLFVRVVQRGQPTAGQES
AQANDLKIAVAYTDMSGKALDPANLPQGKDFIAEVRVNHPNSRPVPYLELALNQTFPS
GWEISNSRMTDIESTSQSAFDYQDIRDDRVNTFFDLPESQSKTFRVRLNAAYPGRYYL
PAVSCSAMYDNSISANTKGMWVTVTAR"
misc_feature 235013..235273
/locus_tag="Halhy_0204"
/note="Bacterial Ig-like domain; Region: Big_5; pfam13205"
/db_xref="CDD:205386"
misc_feature 235583..235864
/locus_tag="Halhy_0204"
/note="Bacterial Ig-like domain; Region: Big_5; cl01012"
/db_xref="CDD:207284"
misc_feature 236735..236989
/locus_tag="Halhy_0204"
/note="MG2 domain; Region: A2M_N; pfam01835"
/db_xref="CDD:202001"
misc_feature 237839..238267
/locus_tag="Halhy_0204"
/note="Alpha-2-macroglobulin family N-terminal region;
Region: A2M_N_2; pfam07703"
/db_xref="CDD:203733"
misc_feature 238487..238687
/locus_tag="Halhy_0204"
/note="Alpha-2-macroglobulin family; Region: A2M;
pfam00207"
/db_xref="CDD:201082"
misc_feature 239057..239821
/locus_tag="Halhy_0204"
/note="Proteins similar to alpha2-macroglobulin (alpha
(2)-M). Alpha (2)-M is a major carrier protein in serum.
It is a broadly specific proteinase inhibitor. The
structural thioester of alpha (2)-M, is involved in the
immobilization and entrapment of...; Region: A2M_like;
cd02891"
/db_xref="CDD:29790"
misc_feature order(239093..239095,239099..239104,239111..239113,
239219..239221,239249..239251,239258..239260,
239405..239407,239771..239773)
/locus_tag="Halhy_0204"
/note="surface patch; other site"
/db_xref="CDD:29790"
misc_feature 239093..239104
/locus_tag="Halhy_0204"
/note="thioester region; other site"
/db_xref="CDD:29790"
misc_feature order(239372..239374,239384..239386,239390..239392)
/locus_tag="Halhy_0204"
/note="specificity defining residues; other site"
/db_xref="CDD:29790"
gene complement(240575..240979)
/locus_tag="Halhy_0205"
/db_xref="GeneID:10584358"
CDS complement(240575..240979)
/locus_tag="Halhy_0205"
/note="SPTR: uncharacterized protein;
IMG reference gene:2504769557"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444991.1"
/db_xref="GI:332662203"
/db_xref="GeneID:10584358"
/translation="MSWDVIVFNLNKKVENADEINDSVLSAIGTNREFKALIEKRYNP
IKWEGNWGIISGINFSIEFGLNDNLEETLSHQVFHLYGENAIYEIIDFCRTHNWQAFD
TGIEQMLDLEKPEKNGYANFRNYLDYVVKKLT"
gene complement(241013..241108)
/locus_tag="Halhy_0206"
/db_xref="GeneID:10584359"
CDS complement(241013..241108)
/locus_tag="Halhy_0206"
/note="IMG reference gene:2504769558"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444992.1"
/db_xref="GI:332662204"
/db_xref="GeneID:10584359"
/translation="METIKRYQQAIFIVLGFLQEYMREDSEYAVA"
gene 241471..244035
/locus_tag="Halhy_0207"
/db_xref="GeneID:10584360"
CDS 241471..244035
/locus_tag="Halhy_0207"
/note="InterPro IPR013428;
KEGG: sli:Slin_3985 membrane-bound dehydrogenase domain
protein;
SPTR: Probable Cytochrome c subunit of Cbb3 type
cytochrome oxidase;
TIGRFAM: membrane-bound dehydrogenase;
IMG reference gene:2504769559;
PFAM: Cytochrome c"
/codon_start=1
/transl_table=11
/product="membrane-bound dehydrogenase domain-containing
protein"
/protein_id="YP_004444993.1"
/db_xref="GI:332662205"
/db_xref="InterPro:IPR003088"
/db_xref="InterPro:IPR009056"
/db_xref="InterPro:IPR011041"
/db_xref="InterPro:IPR011042"
/db_xref="InterPro:IPR016024"
/db_xref="GeneID:10584360"
/translation="MFFLRLLLGSILFSLLISGKESNPNVFADPSAAKSPEEELATFQ
VEPGFQVQLVAAEPMVQEPVALSFDADGRLWVVEMRGFMPDIDGKGEKLPSGRISVLE
DTNGDGLMDKSTIYLDSLVMPRSLGLIKGGALVAHSRALWLTQDVNGDLKADSQILLD
STYARNGLPEHSDNGLLLNTDNWYYNVKSRLRYRLINGTWTRDSTEFRGQWGMCHDDQ
GRLFYNYNWSQLHADLVPPNSLSRNKNHSPSTGIDHGLTIDRKVFPIRATPAVNRGYI
PGTLNKKGRLLEFTAACSPLVLRSSLYPPDYYGNALVCEPSGNLIKRNVVKESGAFLN
AYDPNPGKEFLASTDERFRPVNLCTGPDGAIYVADMYRGLIQHGAYVTPYLREQTLKR
NLVLPIHMGRIWKIVPKNRKLSKVEKLSSFGSAELVQHLSHPDGWQRDMAQRLLVEKA
DLAVVPLLESIAKQSTFTLARFHALWTLEGLGQLQPALLLELLDDPQDLIKTTALRLL
EINPAQHAQMQQVLDQKVLALSKTANIKVALQCALSAHLLSSEVNLTVNQEIIDRFGT
LALIRDAVISSIENQEFTLLKKLWVAPLWQNPEQAQEIFLEMLANAIARKKDPTELLA
LLELAHHQGKAFGKKEQVVLNGLAVAALNFKGSKPIALSAQPELLKRPDLPLDQNGAA
NLKNLFTWPGFNPEISTVTKSTLDEKASKQFAMGRQKYLSNCAGCHGTDGRGMDRFGP
PMAGSEWVLGDEKRLSLVLLHGLEGPIVVQGKKYDAPDILPMMPAHSIMDDADIAAIL
TYIRNEWGNQATPVTASTVGSTRHTSQGRVIPWTVKDLDKYVKAKWPAEKTSKGQK"
misc_feature 241612..242700
/locus_tag="Halhy_0207"
/note="putative membrane-bound dehydrogenase domain;
Region: Piru_Ver_Nterm; TIGR02604"
/db_xref="CDD:162945"
misc_feature <243610..243933
/locus_tag="Halhy_0207"
/note="Cytochrome c, mono- and diheme variants [Energy
production and conversion]; Region: CccA; COG2010"
/db_xref="CDD:32193"
misc_feature 243616..243885
/locus_tag="Halhy_0207"
/note="Cytochrome c; Region: Cytochrom_C; pfam00034"
/db_xref="CDD:200944"
gene 244283..245386
/locus_tag="Halhy_0208"
/db_xref="GeneID:10584361"
CDS 244283..245386
/locus_tag="Halhy_0208"
/note="COGs: COG1082 Sugar phosphate isomerase/epimerase;
InterPro IPR012307;
KEGG: sli:Slin_3986 xylose isomerase domain protein TIM
barrel;
PFAM: Xylose isomerase, TIM barrel domain;
SPTR: AP endonuclease, family 2;
IMG reference gene:2504769560;
PFAM: Xylose isomerase-like TIM barrel"
/codon_start=1
/transl_table=11
/product="xylose isomerase domain-containing protein"
/protein_id="YP_004444994.1"
/db_xref="GI:332662206"
/db_xref="InterPro:IPR012307"
/db_xref="InterPro:IPR013022"
/db_xref="GeneID:10584361"
/translation="MKQTNPYPAKQRGIKRREFVQTASLGLAALTSPISILSALVGGT
AMGIVVHSYATRWNAKAESKNYPAFTNAIQLLEHSHSIGAGGIQVVVGGWTQDFAKKV
RDSREKLGLYLEGSIGLPKAAADVATFEKEVLAAKEAGVQILRTVCLNGRRYENFHSA
EAFKAFKEQSLQSIRWAEPIVKKHRIKLAVENHKDWKAQELVDIIKSISSPWVGVTLD
FGNNISLLEDPMEVITTLAPYAFSTHVKDMGLGEYEQGFLLSEVPLGSGVVDLSAAVA
LCKKMNPGITFNLEMITRDPLEIPCFSEGYWPTFPQTPAPQLAKIIHMVRAKKFAGAL
PSVKNLAFEEKLAFEEKNVLECLQYSKNTLGLG"
misc_feature 244577..245089
/locus_tag="Halhy_0208"
/note="Xylose isomerase-like TIM barrel; Region:
AP_endonuc_2; pfam01261"
/db_xref="CDD:201692"
misc_feature <244667..245173
/locus_tag="Halhy_0208"
/note="AP endonuclease family 2; These endonucleases play
a role in DNA repair. Cleave phosphodiester bonds at
apurinic or apyrimidinic sites; the alignment also
contains hexulose-6-phosphate isomerases, enzymes that
catalyze the epimerization of...; Region: AP2Ec; cl12060"
/db_xref="CDD:187176"
misc_feature order(244754..244756,244853..244855,244934..244936,
245012..245014,245054..245056,245060..245062,
245150..245152)
/locus_tag="Halhy_0208"
/note="Metal-binding active site; metal-binding site"
/db_xref="CDD:28903"
gene 245529..246320
/locus_tag="Halhy_0209"
/db_xref="GeneID:10584362"
CDS 245529..246320
/locus_tag="Halhy_0209"
/note="COGs: COG1028 Dehydrogenase with different
specificities (related to short-chain alcohol
dehydrogenase);
InterPro IPR002198;
KEGG: sli:Slin_3987 short-chain dehydrogenase/reductase
SDR;
PFAM: Short-chain dehydrogenase/reductase SDR;
PRIAM: 3-oxoacyl-[acyl-carrier-protein] reductase;
SPTR: 3-oxoacyl-(Acyl-carrier-protein) reductase;
IMG reference gene:2504769561;
PFAM: short chain dehydrogenase"
/codon_start=1
/transl_table=11
/product="3-oxoacyl-ACP reductase"
/protein_id="YP_004444995.1"
/db_xref="GI:332662207"
/db_xref="InterPro:IPR002198"
/db_xref="InterPro:IPR002347"
/db_xref="InterPro:IPR016040"
/db_xref="InterPro:IPR020904"
/db_xref="GeneID:10584362"
/translation="MDQGLKALPGIKLFDLSGKTAIVTGGSKGLGLAMAAGLASAGAN
ILLVNRNEAEGIQAAAELAQAFSIRADSFAADVTKQAQTEAMAQKAMDTFGRIDILIN
SAGINIRGAIDELNLEDFNQVMAVNVTGTWLCSKAVVPHMKKAGTGSIINLASTLGLV
GLANRTPYTSSKGAVVQMTRALGLELAPFNIKVNAICPGPFLTEMNLPIADTEEGKKF
VVGATALGRWAEMKEIQGAAIFLASEAASYMVGSMVTVDGGWTAR"
misc_feature 245568..246317
/locus_tag="Halhy_0209"
/note="3-ketoacyl-(acyl-carrier-protein) reductase;
Validated; Region: fabG; PRK05557"
/db_xref="CDD:180126"
misc_feature 245568..246314
/locus_tag="Halhy_0209"
/note="Rossmann-fold NAD(P)(+)-binding proteins; Region:
NADB_Rossmann; cl09931"
/db_xref="CDD:213117"
misc_feature order(245601..245603,245607..245612,245616..245618,
245673..245681,245835..245843,245985..245993,
246030..246032,246042..246044,246120..246131)
/locus_tag="Halhy_0209"
/note="NAD(P) binding site [chemical binding]; other site"
/db_xref="CDD:187535"
misc_feature order(245907..245909,245991..245993,246030..246032,
246042..246044)
/locus_tag="Halhy_0209"
/note="active site"
/db_xref="CDD:187535"
gene complement(246502..247842)
/locus_tag="Halhy_0210"
/db_xref="GeneID:10584363"
CDS complement(246502..247842)
/locus_tag="Halhy_0210"
/note="InterPro IPR003346;
KEGG: rcu:RCOM_0102440 hypothetical protein;
PFAM: Transposase, IS116/IS110/IS902;
SPTR: uncharacterized protein;
IMG reference gene:2504769562;
PFAM: Transposase IS116/IS110/IS902 family; Transposase"
/codon_start=1
/transl_table=11
/product="transposase IS116/IS110/IS902 family protein"
/protein_id="YP_004444996.1"
/db_xref="GI:332662208"
/db_xref="InterPro:IPR002525"
/db_xref="InterPro:IPR003346"
/db_xref="GeneID:10584363"
/translation="MAKESASAKFSIVHPQAAGIDVGSRFHWVSVGQEAGESKQFGVF
TKDLHALCQWLVSLGIRTVAMESTGFYWKQLFVMLQSYGMEVYLVNASFTKNIQGRKP
SDLSDSQWIWKMHSVGLLPASFQPDSFTEELRTYVRHRNRLIEGAAQCVNRMQKCLTL
MNLQLPIVVSDISGKSGKAIIEAILNGERDGSKLAQLADYRLKADKATLSEALTGFWR
ADHLFELDQHWKMYHHYQEHLAQCDQKIEEVLQSRVQVTGQAELAYDQKKSRGKNDPS
FQLATYAYQLSDGVDLLQVDGVGLNLILTLLSEVGLDLTQFPSAKHFTSWLCLCPNKK
VSGGKVLSSSTRKNKSRLRKAFKQTAIGVCRKKDCVLAHFYRKMAAKHGKGTAITATA
RKIAVIVYHMLQKKEAYQPQQLEDYQQKVRTQKIKQIQRTIRNLEVHEHELVFA"
misc_feature complement(247384..247791)
/locus_tag="Halhy_0210"
/note="Transposase; Region: DEDD_Tnp_IS110; pfam01548"
/db_xref="CDD:201852"
misc_feature complement(246715..246969)
/locus_tag="Halhy_0210"
/note="Transposase IS116/IS110/IS902 family; Region:
Transposase_20; pfam02371"
/db_xref="CDD:202223"
gene complement(248418..249749)
/locus_tag="Halhy_0211"
/db_xref="GeneID:10584364"
CDS complement(248418..249749)
/locus_tag="Halhy_0211"
/note="COGs: COG2610 H+/gluconate symporter and related
permease;
InterPro IPR003474;
KEGG: fbc:FB2170_15906 GntP family permease;
PFAM: Gluconate transporter;
SPTR: Permease, GntP family;
IMG reference gene:2504769563;
PFAM: GntP family permease;
TIGRFAM: gluconate transporter"
/codon_start=1
/transl_table=11
/product="gluconate transporter"
/protein_id="YP_004444997.1"
/db_xref="GI:332662209"
/db_xref="InterPro:IPR003474"
/db_xref="GeneID:10584364"
/translation="MLTILFTLVALAFILVAITKYDIHPFLALFVGAIGFGLLVGMPT
SLIIQSIKDGFGGVMGNIGILILLGVTIGVFLEKTGGAMVIAQKVLSWIGEKSVMLAM
MLSGYILSIPIFGDSTFIMMNPICKSLSLKSKVPYAAVAIALALGATASHSLVPPTPG
PIAAAGIIEANLGSVILWGLLVSSITLIPSYFFIKKFVMGIPLEPKFATDENVEKTGK
QPSAFKAFLPIVFPLILIIFASIADYPTKPFGTGALAQTILFVGSPIIALLIGAFLSF
FLPEKFDRKLLSSTGWIGDSLVLAAPVILITGAGGVFGKMLQNSGIGDLVSSSLSEAG
WGIFLPYIIAFSLKTAQGSSTVAMITTASIIAPLLVTLGLDSEMMRIFTVLAIGSGAI
AISHANDSFFWAVTQLTGLTIKQGNLSHSIGTLIMSATAILVIFGLTFLVG"
misc_feature complement(248424..249749)
/locus_tag="Halhy_0211"
/note="Na+-H+ antiporter family; Region: Na_H_antiport_2;
cl15264"
/db_xref="CDD:210060"
misc_feature complement(248427..249746)
/locus_tag="Halhy_0211"
/note="GntP family permease; Region: GntP_permease;
pfam02447"
/db_xref="CDD:111353"
gene complement(249855..250715)
/locus_tag="Halhy_0212"
/db_xref="GeneID:10584365"
CDS complement(249855..250715)
/locus_tag="Halhy_0212"
/note="COGs: COG3568 Metal-dependent hydrolase;
InterPro IPR005135;
KEGG: dfe:Dfer_2405 endonuclease/exonuclease/phosphatase;
PFAM: Endonuclease/exonuclease/phosphatase;
SPTR: uncharacterized protein;
IMG reference gene:2504769564;
PFAM: Endonuclease/Exonuclease/phosphatase"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444998.1"
/db_xref="GI:332662210"
/db_xref="InterPro:IPR005135"
/db_xref="GeneID:10584365"
/translation="MSPNLKLVLLTLLFQLMMGVLPAQSLVTMTFNIRYNTTQDGENQ
WQKRKENLASMLPFYGVDICGMQEALVGQIKDVISAQPQYAYLGVGRDDGQEKGEFSP
ILYLKDKFEVLSSATFWLSETPNVPSKGWDANLNRIVTWAKFKDKKSKKVFYFFNTHY
DHIGKVARRESSKLLLQKVKEIAGTTPAIITGDFNAVPSDEPITVLVEANNPDKLIDT
EGLSLSPHFGPYSTFNGFTVMEQEGRHIDYIFIKNPGKLKVLKHATLTNTWAGRFASD
HHAVLAVLGW"
misc_feature complement(249864..250631)
/locus_tag="Halhy_0212"
/note="Exonuclease-Endonuclease-Phosphatase domain;
uncharacterized family 1; Region: EEP-1; cd09083"
/db_xref="CDD:197317"
misc_feature complement(order(249885..249890,249975..249977,
250131..250133,250137..250139,250239..250241,
250512..250514,250620..250622))
/locus_tag="Halhy_0212"
/note="putative catalytic site [active]"
/db_xref="CDD:197317"
misc_feature complement(order(249888..249890,250512..250514))
/locus_tag="Halhy_0212"
/note="putative metal binding site [ion binding]; other
site"
/db_xref="CDD:197317"
misc_feature complement(order(249885..249887,250131..250133,
250239..250241))
/locus_tag="Halhy_0212"
/note="putative phosphate binding site [ion binding];
other site"
/db_xref="CDD:197317"
gene complement(250758..254609)
/locus_tag="Halhy_0213"
/db_xref="GeneID:10584366"
CDS complement(250758..254609)
/locus_tag="Halhy_0213"
/note="KEGG: cpi:Cpin_3756 hypothetical protein;
SPTR: PKD domain protein;
IMG reference gene:2504769565"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004444999.1"
/db_xref="GI:332662211"
/db_xref="GeneID:10584366"
/translation="MIANFWVHPKTTGMFRPLFLTMLLLMIGQAVQAADYYWVEDAGN
WSDLNHWATTSGGVAKHKVVPTVNDQVFFDANSGNSIRITIDVEHVYCRNMNWTGALG
APTLSGTAEKAIHVFGSLTFVANLKQEFRGDFFFEGDHVGSLITSAGRIFNRNIHLDG
SGSWGLADSLFVLNTFYFVRGDFSTANQQVFTHSFLSREGNQRKLSLGKTYWTLRNLD
PQNNARLEWAINPVNLVLDAVNSTIDFSNLSGSMMSGPDGPGLQYNVVLFSGGEAQLS
NQSKQSQVFDTISCIGSLNSYGSNTTTVLKMLNFYQVFKINSNDTFTLAEWIVPKACY
GRIEMSSTVLNGQAYLKTTQALNVERLSIRDIKRIGVGTTTANNSIDVGNNQGWIINQ
LGGRDLYWVGKGGSGSWYEQANWAAVSGGVGGECIPNDMDNVFFDVNSFDGPDQRVIS
RDQQAYCKNMSWTGVTNNPINFDMWILNAYGSVDLPENKVGGISELRLLSPDQNQTLR
TRGYHIYNAILNGAGSWILQDTLSATNLYQRSGEFNSNGKPVTTETFFMLNDDSTTLK
MGNSHWRITRNGSLASSLYSFFIGPKATVDAGTSLLEFTNTSPTYITYADVKFHHVLF
SNAEGTSSLLSDYVAAGDKIPKVSTFNRMEMRNRGIILGENVIDSLIFTAGKTYDLDA
AHAQTINKYFQAVGNPCDSIVLRSTQMGNKSQIKMDSGVVRANFLQMRDQQGVGSSRF
FAGANSTNLNNSNENWVFGSPELDAGILGKDVVLCQNNSITLNAYTLNFNEKYRWSDG
STQATLPVSQIGTYHVAVTYKNGCALHDTVKVLAPSAFKLNLINDTTVCFGQSLILDA
DLNLHGVNYRWQDGSSNAQIKVTQAGTYKVVVDLSGCTTVVDSTKVRMINLSALNLGR
DTSIGSAGSLLLDASKTGGRNYLWSDNSTAPTLRVNTADTFWVEVRDGECTARDTIVV
KGCLPLNLSLGRDSILCAGASLDLHSNLDNAVYHWQDGSSNRSFKAATTGLYWLEATV
NGCADRDSINLTVQPLPHFELGKDTVLCTGETLILRAISGVNQLRWSTGSTKETITVI
NSGIFWAKAVKDNCSFSDSITVTYKSIPTVALGQDTLVCDDRPHVLWASASKGAQLFW
QDGSSRSSLSATAAGTYWVRAANDRCTSTDSLELSFRHCIVFKAYTPNAFTPNGNTNN
DVFRPFINELVQVKGYELQVFDRWGGPVFRSTDLNTGWDGQIRGQQAPKGVYIYWFKI
EYVDDRGAGNELVRGEITLFR"
misc_feature complement(250821..251033)
/locus_tag="Halhy_0213"
/note="C-terminal domain of CHU protein family; Region:
CHU_C; pfam13585"
/db_xref="CDD:205763"
gene complement(254913..261101)
/locus_tag="Halhy_0214"
/db_xref="GeneID:10584367"
CDS complement(254913..261101)
/locus_tag="Halhy_0214"
/note="KEGG: chu:CHU_0597 hypothetical protein;
SPTR: PKD domain protein;
IMG reference gene:2504769566"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004445000.1"
/db_xref="GI:332662212"
/db_xref="GeneID:10584367"
/translation="MFRPLLPTILVLLFIQTGHAADYYWVGGSGDWSDISHWATTSGG
ATRHNVVPTPNDRVFFDANSFTAPGQTINVNNQSIFCLDMIWDGVSNNPTFSAPANFI
LNVSGSLRLNANMVFSFRGAVNFLANTSGHTINMAGHRIRQTTTFAGLGGGWTLTGPM
QVDTTLFIKAGSLNTGNQNISCLKLFVTPTSSVSLNLGSSRITVSGRYYRRYEWWQQD
SAVVEFNRTNLTVTPGTSIIDLTSDKPLLRATGMGNVNLATVLYSNALGSGKFEVDNG
GTAALLRLDMRNDSEVKGTASFDELILGPGKSFKFQAGFTYKLKKLFAIGLCTTPIQV
FSSTSGTQVTFEAPADSITGNFLSLKDVRGTGGAQFVARNAADLGNNTGWTIVPKSNN
NLFWVGGSGNWSNPARWSFTSGGAGGACVPTAGDNVFFDANSGNGITVTIDVENAYCR
NMTWTGVLGTPTLSGAKEKGIHVFGSLTFVPNLRQNHLGDFFFEGANAGNLITSAGRI
FNKDIYVDGSGTWSLADSLSVFNTFYFNQGDFNTANQRVFARNFLSRESKLRKLTLGS
SLWTMRNREPQNYNILDWNINPISLILDAGNSTINFSNLYGYMTANPTGPELKYNVVL
FSGGDGTLNNSFRQKQSFDTISCVTTLWDYGSNSSNVVIMRNVNYAFQINAQDTFTLG
TLIVPDLCTGMVELRSSANGGHAFLKTTQSITLQRVMIQDINRIGVGTATANNSIDLG
NNQGWSIVEALGRDLYWVGRGGNGDWFDPVNWSLSSGGPGGECIPTAKDNVFFDANSF
NGPNQRVNNPSRFAYCKNMSWNGVTNNPIFSMWVLNAFGSVDLPNKTPGSYLSEISFR
SPEKNRTILTRGFDAFNVFFRSEGSWILQDTLSAYYISMQSGEFNSNDKPVTTNYFYM
SHYGFNFQTLKMGKSHWRINGNGDVNTFNFNFYVGPNARVDAGTSLLEFTNTLPVYVT
YADVKFYNVLFSNAEGTATLRSHYEPFNTNIPPKVSTFNKIEIRNNGVILGKNVIDSL
IFTAGKTYTLDVAQSQTVNKYFQVIGNNCSPIELRSTVAGNKAIVNMNGGVVLGDFIQ
MRDQRGVGSTKFFAGANSTNINNSNENWIFDSPVDYVDEGILGKDVVLCKNNSLTLDA
NTYNTSERYLWSNGSTQATLPVNRAGTYHVAVTYGNGCVLRDTVRILPADDFTPNLIN
DTTLCSGQSLVLDADLNLVGATYQWQDGSTSASINATQAGKYKVIVELSGCTATDSTT
VRIISPAAINLGRDTTICDGQSLTLDASKAGGRTYLWSDGSTADTLRASTAGLFWVEV
NDGQCTARDSIVISVLPSLGLSLGRDTSFCEAASFDLRSNLGNAVYRWQDGSSNATFR
ATTAGVYWLEATANGCTERDSINLVIQALPRFELGGDTTLCVGAIFNLVGQVNTPGNV
TYRWSTGSTNSGINVQSGGVYTLTTTLNTCTFSDQRRFNFNQGPSFELGVNRGFCIGE
AYTMDVANIGATYLWNTGATASRIRVTQTNTYYVDVSLNGCTKRDSILVSFAPTFRYS
LGRDTTLCAGESLLLNASRVNATYRWNNGNTTATRTLTQTETVWSDVTVEGCRVRDSI
KVQFIDLPRGLLGRDTSLCDGQSLPLQVNVPGATIRWQDNSSANIFTVTQGGLYSVRA
SAGRCSVADSIRVDYKPIPLFSLGRDTILCNNETLNLNPSVAGGTYRWNDGQSTISRQ
INQSGTYSLAIDLNGCSRSDTVAVQVVNLPPRLLANDTTLCEGRTLTLQLQVPGVNYL
WQDGSNTPRFVVNSAGTYWAQASAGRCQIRDSIQIGYNPLPRFNLGKDTVLCSGENLT
LLAFTGADQVIWNTGSSPSPSISVTNTGVYSARAILNNCSFADSIKVDVKAIPTVTLG
PDTLVCDDKPHLLRASASTGAQLLWQDGSSQSSLSTTTPGTYWVRASNDRCASSDSLE
LSFRQCIVFKAFTPNAFSPNGNTTNDVFRPLINEFVQVNGYELQVFDRWGGQVFRSTD
INTGWDGLIRGQQAPQGVYIYWFKIEYVDDKGAGSELIRGEVSLIR"
misc_feature complement(257313..257489)
/locus_tag="Halhy_0214"
/note="Bacterial Ig-like domain (group 3); Region: Big_3;
pfam07523"
/db_xref="CDD:203665"
misc_feature complement(254961..255188)
/locus_tag="Halhy_0214"
/note="C-terminal domain of CHU protein family; Region:
CHU_C; pfam13585"
/db_xref="CDD:205763"
gene complement(261142..262605)
/locus_tag="Halhy_0215"
/db_xref="GeneID:10584368"
CDS complement(261142..262605)
/locus_tag="Halhy_0215"
/note="COGs: COG0076 Glutamate decarboxylase and related
PLP-dependent protein;
InterPro IPR002129;
KEGG: hoh:Hoch_0159 pyridoxal-dependent decarboxylase;
PFAM: Pyridoxal phosphate-dependent decarboxylase;
PRIAM: Sphinganine-1-phosphate aldolase;
SPTR: Pyridoxal-dependent decarboxylase;
IMG reference gene:2504769567;
PFAM: Pyridoxal-dependent decarboxylase conserved domain"
/codon_start=1
/transl_table=11
/product="Sphinganine-1-phosphate aldolase"
/protein_id="YP_004445001.1"
/db_xref="GI:332662213"
/db_xref="InterPro:IPR002129"
/db_xref="InterPro:IPR015421"
/db_xref="InterPro:IPR015424"
/db_xref="GeneID:10584368"
/translation="MSERISIPARGRNKDTILDELYKLHLNDVSWKEGRAWSMVYYVD
QEHQQLLEQAYNSFFSENYLNPFAFQSLKKMELEVIQMTAGLLNGDENVTGTMTSGGT
ESIFLAVYTYRERARQLFPHIKQPEIVVSTTIHPAFEKAAHILNIVVKKAAVDQNLCA
QPQALEKLISPNTILIAASAPTYPHGVLDPITEIASLAQARKIPFHVDCCIGGFMLPW
VEKLGYPVAPFDFRVPGVTSISADVHKFGYGAKGASVLLYRNMNYLKHQFYVATDWPG
GIYASPTLLGSRPGGAIAATWSAMQALGQDGYLRITQEIMLATSQIRKALEDIPEIII
LGNPVMNILAYSTRDNQPDIFVIADQLEQKGWMLDRQQLPNSIHLTVMRQNISVIDQY
LEDLKASIIFAKEHPAATAKGNAALYGLMARIPFRGMVEKNVRKIFEELYDFSKTAPL
QDEETPSTLPPAPIWMGQLNRVLTAVVRVKGFWKKRR"
misc_feature complement(261376..262602)
/locus_tag="Halhy_0215"
/note="Glutamate decarboxylase and related PLP-dependent
proteins [Amino acid transport and metabolism]; Region:
GadB; COG0076"
/db_xref="CDD:30425"
misc_feature complement(261409..262488)
/locus_tag="Halhy_0215"
/note="Aspartate aminotransferase (AAT) superfamily (fold
type I) of pyridoxal phosphate (PLP)-dependent enzymes.
PLP combines with an alpha-amino acid to form a compound
called a Schiff base or aldimine intermediate, which
depending on the reaction, is the...; Region: AAT_I;
cl00321"
/db_xref="CDD:213094"
misc_feature complement(order(261871..261873,261880..261882,
261973..261975,261982..261984,262069..262071,
262291..262293,262300..262305))
/locus_tag="Halhy_0215"
/note="pyridoxal 5'-phosphate binding pocket [chemical
binding]; other site"
/db_xref="CDD:99742"
misc_feature complement(261871..261873)
/locus_tag="Halhy_0215"
/note="catalytic residue [active]"
/db_xref="CDD:99742"
gene 262873..264057
/locus_tag="Halhy_0216"
/db_xref="GeneID:10584369"
CDS 262873..264057
/locus_tag="Halhy_0216"
/note="COGs: COG2017 Galactose mutarotase;
InterPro IPR008183;
KEGG: cpi:Cpin_0489 aldose 1-epimerase;
PFAM: Aldose 1-epimerase;
PRIAM: Aldose 1-epimerase;
SPTR: Aldose 1-epimerase;
IMG reference gene:2504769568;
PFAM: Aldose 1-epimerase"
/codon_start=1
/transl_table=11
/product="aldose 1-epimerase"
/protein_id="YP_004445002.1"
/db_xref="GI:332662214"
/db_xref="InterPro:IPR008183"
/db_xref="InterPro:IPR011013"
/db_xref="InterPro:IPR014718"
/db_xref="InterPro:IPR015443"
/db_xref="InterPro:IPR018052"
/db_xref="GeneID:10584369"
/translation="MKSKQKTLIGVALLGLITLGCQSKPKEKSNTMDETSSESAAVYA
LPDPQKFNTTHEGKAIKLFILKNGPIQAAITNYGARMVGMLVPDKDGNPVDVLTGYNS
IDEYLKQESYFGCVVGRYGNRIAKGKFTLNGKTYTLATNNGVNHLHGGPKGFCSKVWD
AKQIDSSTVEFNYLSKDMEEGYPGNLQVKVTYSLTADRGVKIQYSATTDKPTVLNLTN
HNYWNLDGERDTSINDHLLQIYASKYTPVDSTLIPTGELASVEGTPFDFRKPTAIGDR
VNADHPQIKYGKGYDHNFVLIPQKVAAGELPLIATVQSAQTGIKMEVLTSEPGIQFYS
GNFLTGSQVGKGGQAYVFRSSLCLETQHFPDSPNQPKFPTTTLNPGQTYATSTVYRFP
AQ"
misc_feature 263023..264045
/locus_tag="Halhy_0216"
/note="Galactose mutarotase and related enzymes
[Carbohydrate transport and metabolism]; Region: GalM;
COG2017"
/db_xref="CDD:32200"
misc_feature 263056..264045
/locus_tag="Halhy_0216"
/note="galactose mutarotase_like; Region:
galactose_mutarotase_like; cd09019"
/db_xref="CDD:185696"
misc_feature order(263206..263208,263239..263241,263314..263316,
263527..263529,263533..263535,263743..263745,
263869..263871,263947..263949)
/locus_tag="Halhy_0216"
/note="active site"
/db_xref="CDD:185696"
misc_feature order(263527..263529,263947..263949)
/locus_tag="Halhy_0216"
/note="catalytic residues [active]"
/db_xref="CDD:185696"
gene 264145..264900
/locus_tag="Halhy_0217"
/db_xref="GeneID:10584370"
CDS 264145..264900
/locus_tag="Halhy_0217"
/note="COGs: COG2935 arginyl-tRNA:protein
arginylyltransferase;
InterPro IPR007471:IPR007472;
KEGG: mrb:Mrub_1912 arginine-tRNA-protein transferase
domain-containing protein;
PFAM: Arginine-tRNA-protein transferase, C-terminal;
Arginine-tRNA-protein transferase, N-terminal;
SPTR: Arginine-tRNA-protein transferase domain protein;
IMG reference gene:2504769569;
PFAM: Arginine-tRNA-protein transferase, C terminus;
Arginine-tRNA-protein transferase, N terminus"
/codon_start=1
/transl_table=11
/product="arginine-tRNA-protein transferase
domain-containing protein"
/protein_id="YP_004445003.1"
/db_xref="GI:332662215"
/db_xref="InterPro:IPR007471"
/db_xref="InterPro:IPR007472"
/db_xref="InterPro:IPR016181"
/db_xref="GeneID:10584370"
/translation="MILYPDSYLFSEENQLELNGQLIHHQHAWLLQIGDEELDLMFEN
GWRRAGNVFYRYSYDTHEDIASDGQPMQVLPLRIPVAEFTLTKSQAKIWRKNADFSWN
LVSGRPSETHHELFLLHRERFERNAPDSIFDFITTTHESLPTRGLLLDVYDGDKLIAS
SLIDHTPKSMSSIYAMFHPDYGAYSLGVHTMLLEIYAARQLGVTFYYPGFAHHEPSFY
DYKKRFNGLQWLDWRDAMDWLPYERLKGRTEKE"
misc_feature 264154..264411
/locus_tag="Halhy_0217"
/note="Arginine-tRNA-protein transferase, N terminus;
Region: ATE_N; pfam04376"
/db_xref="CDD:202988"
misc_feature 264523..264837
/locus_tag="Halhy_0217"
/note="N-Acyltransferase superfamily: Various enyzmes that
characteristicly catalyze the transfer of an acyl group to
a substrate; Region: NAT_SF; cl00357"
/db_xref="CDD:213096"
gene complement(265085..265909)
/locus_tag="Halhy_0218"
/db_xref="GeneID:10584371"
CDS complement(265085..265909)
/locus_tag="Halhy_0218"
/note="IMG reference gene:2504769570"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004445004.1"
/db_xref="GI:332662216"
/db_xref="InterPro:IPR010356"
/db_xref="GeneID:10584371"
/translation="MIELIKNVVQLAQSIQSQDILLAQTPAIPQHVGAFIQNVAPEAQ
DDIDATNKFISAYRQAKSSIDTAIAAWRGGSDEARTQALNQLQGLSTFVQSATSANTK
VFQDLSSFKQAFSADEEQLGGVLNQINAQISAIQAGIQDQQNTLAQEKATLALISVNP
ITYWIYEGASLLTTSQTLEQAIILANTQMNAYAQTYYNLQHASAITQQLSSSVQSLIN
SSQNLSNSTSIIGGQITQLVDTVMNASATNEEAVVFQAYWATFDGQVNDLDVFINS"
gene complement(265946..267112)
/locus_tag="Halhy_0219"
/db_xref="GeneID:10584372"
CDS complement(265946..267112)
/locus_tag="Halhy_0219"
/note="InterPro IPR008414;
KEGG: ppr:PBPRB1474 hypothetical protein;
PFAM: Bacillus haemolytic enterotoxin;
SPTR: uncharacterized protein;
IMG reference gene:2504769571;
PFAM: Bacillus haemolytic enterotoxin (HBL)"
/codon_start=1
/transl_table=11
/product="hemolytic enterotoxin"
/protein_id="YP_004445005.1"
/db_xref="GI:332662217"
/db_xref="InterPro:IPR008414"
/db_xref="InterPro:IPR010356"
/db_xref="GeneID:10584372"
/translation="MQFSSRNLITGAAADNSSIKDLREAVLGSGSAGLVVQTYANTIL
QQPDITLPADLLAKIPVDVFLKTARTHADNYLNNIQPGIINTIQDVNGYSTQFSSFNK
VISQSINTWKMGNNLTAKQEALDLLKQLQIGLTSKQNKVILVSKDLGKLLLDLNGDVA
NFTTAVSTADIEIGADSKVIGDLENTISSFDSKIAGAASGVALSGLVAIGGGLLIVVG
AGLTPFTFGASTGLIVAGAAVVVVGAGGLTASSVVLSSLISGKSDAIRQKAILTDDLN
ALHLLKPAFVNLQSSASNAIAQVNNMANAWNILGGNLGNVIGSISDAQTFSDLPVVVQ
AYLDTANDQWADVKTAVQTINQQMTGVQTKILKDGNGKLIQLNNESILTAAEAA"
misc_feature complement(<266783..267052)
/locus_tag="Halhy_0219"
/note="Bacillus haemolytic enterotoxin (HBL); Region:
Bacillus_HBL; pfam05791"
/db_xref="CDD:147765"
gene complement(267158..268303)
/locus_tag="Halhy_0220"
/db_xref="GeneID:10584373"
CDS complement(267158..268303)
/locus_tag="Halhy_0220"
/note="InterPro IPR008414;
KEGG: aha:AHA_2582 hypothetical protein;
PFAM: Bacillus haemolytic enterotoxin;
SPTR: uncharacterized protein;
IMG reference gene:2504769572;
PFAM: Bacillus haemolytic enterotoxin (HBL)"
/codon_start=1
/transl_table=11
/product="hemolytic enterotoxin"
/protein_id="YP_004445006.1"
/db_xref="GI:332662218"
/db_xref="InterPro:IPR008414"
/db_xref="InterPro:IPR010356"
/db_xref="GeneID:10584373"
/translation="MSQTRILSLIQNSNNDLAPDFLSQDTNDAGANILLMQIFANLAL
QQPDLSVNLTKNQDILINLKQHQKLAKRHGAYYLNTVQPGVLQIMVDLLGYSSMFQHF
KKQIDQLISSVHSDPEAKKSVLALLSELERTALQKQINAQTTVGILRNYALQTALDET
NFKADLDEADKVIGSDNGHLSDIKNEIADAQQQIKGNIAQIVIGSLIVGAGAVVIVLG
ATGTLLTAGASAEVAIGGVGVVAGGATLVATAASDLANNNQKLASLYEESAELNATLA
ILLILKGQIDYMYETSNDLVSAINNFNTEWGSVISGIGNFKEAVGRANTNGDQVELMT
ALNLAETEWKDVSTSVQKVLSKITTLKPEQVNNVLDFYRDKSKALAA"
misc_feature complement(267707..268255)
/locus_tag="Halhy_0220"
/note="Bacillus haemolytic enterotoxin (HBL); Region:
Bacillus_HBL; pfam05791"
/db_xref="CDD:147765"
gene complement(268551..269441)
/locus_tag="Halhy_0221"
/db_xref="GeneID:10584374"
CDS complement(268551..269441)
/locus_tag="Halhy_0221"
/note="InterPro IPR002781;
KEGG: cbh:CLC_3090 hypothetical protein;
PFAM: Protein of unknown function DUF81;
SPTR: membrane protein;
IMG reference gene:2504769573;
PFAM: Sulfite exporter TauE/SafE"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004445007.1"
/db_xref="GI:332662219"
/db_xref="InterPro:IPR002781"
/db_xref="GeneID:10584374"
/translation="MIAFIWISLAVLTVGYSLVLINDVIKHKDQLENSSWIKTGLIGF
VVNFFDVLGIGAFAPQTALLKFTKQTEDRVLPGTLNVANTIPVLVQALIFITVVEVEP
VTLILMLVSAAAGAILGAGVVSKLPEKKIRLIMGFALLVTAGFMFARNMEWIQGGGTA
IGLHSTKLLIAVLVNFILGALMTVGIGLYAPCMALVFALGMSPQVAFPIMMGSCAFLM
PPASIRFIREGAYNRKAAIGMAIPGIVAVLIAAFIVKSLPLDTLRWLVIVVILYTSVV
MLRAGYGQKHAHENEVKPTR"
misc_feature complement(268611..>269066)
/locus_tag="Halhy_0221"
/note="Sulfite exporter TauE/SafE; Region: TauE;
pfam01925"
/db_xref="CDD:202049"
gene complement(269438..271111)
/locus_tag="Halhy_0222"
/db_xref="GeneID:10584375"
CDS complement(269438..271111)
/locus_tag="Halhy_0222"
/note="COGs: COG0308 Aminopeptidase N;
InterPro IPR014782;
KEGG: sus:Acid_2560 peptidase M1, membrane alanine
aminopeptidase;
PFAM: Peptidase M1, membrane alanine aminopeptidase,
N-terminal;
PRIAM: Glutamyl aminopeptidase;
SPTR: Peptidase M1, membrane alanine aminopeptidase;
IMG reference gene:2504769574;
PFAM: Peptidase M1"
/codon_start=1
/transl_table=11
/product="glutamyl aminopeptidase"
/protein_id="YP_004445008.1"
/db_xref="GI:332662220"
/db_xref="InterPro:IPR001930"
/db_xref="InterPro:IPR014782"
/db_xref="GeneID:10584375"
/translation="MHCCLKLVLLLPLLCLQAFSIYADNYPKNLNIDILHYTFELKLS
DATDEIFGVTTMQVLFKKEGIGKLRLDLVKANAALQGKGMTVESITQQGKSLAYTHAD
NVLWVSLPQPSNANSESQFVITYHGIPADGLRIGSTKYGDRSFFNENWPNRARHWLPT
VDHPYEKASSEFVVRAPAHYQVVSNGLLMEETNLDASTKLTHWKQAIPVSSWLYVLGV
AEFAVQYVGWFEGKSIQTWVYNKDREAGFYDFAEPTKQALGFFSDYVGPYVYEKIANV
ETPSVKGGMETSSAIFYGEELVDGKRSTRLRNVVIHELAHQWFGNAVTESSWDDAWLS
EGFATYFTMLFIEHAYGRAELLSQLQAAKKTTYANLAKDPGYKIVADRSPEIGPVTNA
LTYQKGAWILHMLRNLLGDAAFQTGIRDYYQRFINGHATTTDFRLAMERASGKDLKSF
FDQWLYQGGYIALKGSWTYDPDSKLVKIMLQQTQPSVYVFDFSIEVGCYKAGELLPSI
SKHPVNARTIEIVIPAASKPEKIELDPHLVLLATWEFVETTPPSNTKKK"
misc_feature complement(269918..271039)
/locus_tag="Halhy_0222"
/note="Peptidase family M1; Region: Peptidase_M1;
pfam01433"
/db_xref="CDD:201795"
misc_feature complement(269732..271015)
/locus_tag="Halhy_0222"
/note="Peptidase M1 family Aminopeptidase N; Region:
M1_APN_4; cd09603"
/db_xref="CDD:189010"
misc_feature complement(order(270107..270109,270164..270166,
270176..270178))
/locus_tag="Halhy_0222"
/note="Zn binding site [ion binding]; other site"
/db_xref="CDD:189010"
gene 271212..273833
/locus_tag="Halhy_0223"
/db_xref="GeneID:10584376"
CDS 271212..273833
/locus_tag="Halhy_0223"
/note="InterPro IPR002860;
KEGG: sus:Acid_5051 BNR repeat-containing glycosyl
hydrolase;
PFAM: BNR repeat;
SPTR: uncharacterized protein;
IMG reference gene:2504769575;
PFAM: BNR/Asp-box repeat"
/codon_start=1
/transl_table=11
/product="glycosyl hydrolase"
/protein_id="YP_004445009.1"
/db_xref="GI:332662221"
/db_xref="InterPro:IPR002860"
/db_xref="InterPro:IPR011040"
/db_xref="GeneID:10584376"
/translation="MRQAILLFFSTIIHFNTAFTQQPLSPLEASFRQYQAMKAASVYK
FDWIPLGPTLNSARADVVQVDATRPGTMYVGFGSGSLWKTTNHGQSWNPIFEDQASFG
IGDVELAPSNPDIIYLGTGENLKKPRNFTLPGTGMYRSTDAGKTWQHIGLEDSWAIAE
IAIHPKDPNIVLVAVLGHLWSKNKNRGLYRSINGGKSWQQVLYKDEMTGANDIVIAPS
NPQIMYASLWEVYPGISGKNSGVYRSVDGGKSWSPCIKGLPTGRLVGRIGLTVSYTNP
SKAYALVDNLNNARDEAAELYKTTDGGLTWRKTHAGPFKIFPGIGWYFTDVYVNPKND
EDVFCLGVRLAHSTDGGKNFTFIGGKVTRMTPSLAQGLHLDQCELWINPHNPQHIAVG
NDGGFYLSYDQGLSWMHYNNIPTGEFYDITIDQSNFTIYGGTQDDATVYGPAKEINLN
FPDPWKYLWIDPWDGGDGCVSQVDPDDHKIVYYSMQHGYAVRLDLHADTTFVIQPELP
KDSPDTLRFNYITPYFISPHQGQTLYHGGNFIFKSQNRGTTWKVISPNLALSANSAKK
SFALGALVESKLTKGWLYAGTDKGAFWVSKNDGINWIEHSAGLANHYIRSICPSRFAV
ERVYLAMTGINSDDLHSYLYVSEDAGASWKSIAAGLPDEPVNVILEDPTQENLLYAGG
LRGVYVSLDRGISWSYLGQQLPASAVADLEIHEASMELVVATHGRGIYKLNLRPIQAM
AAGKIPLDQDHLFEIPVAKRPWFNSSGGEPDYRTLERTPITFWLTAPKPVTLSIRNAD
QKILWKTTLNGQRGFNQFRWDLVTSRHSSDYPYFVHYERFLAAGVYQMVLSSAGNNDR
VRPLNVVDSVSPYAKER"
misc_feature 271623..>271967
/locus_tag="Halhy_0223"
/note="VPS10 domain; Region: VPS10; smart00602"
/db_xref="CDD:128865"
misc_feature 272979..>273308
/locus_tag="Halhy_0223"
/note="VPS10 domain; Region: VPS10; smart00602"
/db_xref="CDD:128865"
gene complement(273838..274680)
/locus_tag="Halhy_0224"
/db_xref="GeneID:10584377"
CDS complement(273838..274680)
/locus_tag="Halhy_0224"
/note="COGs: COG3970 Fumarylacetoacetate (FAA) hydrolase;
InterPro IPR002529;
KEGG: sli:Slin_1198 fumarylacetoacetate (FAA) hydrolase;
PFAM: Fumarylacetoacetase, C-terminal-like;
SPTR: Fumarylacetoacetate (FAA) hydrolase;
IMG reference gene:2504769576;
PFAM: Fumarylacetoacetate (FAA) hydrolase"
/codon_start=1
/transl_table=11
/product="fumarylacetoacetate (FAA) hydrolase"
/protein_id="YP_004445010.1"
/db_xref="GI:332662222"
/db_xref="InterPro:IPR002529"
/db_xref="InterPro:IPR011234"
/db_xref="GeneID:10584377"
/translation="MKIYRTSQGIVIESDGQFFLSNNHNWDNYINRDNLYHEVLNEIQ
SLRPDSDLQSLISTQLQAPINGQEVWASGVTYLRSREARMEESKDSGGGDFYAKVYDA
DRPELFFKATAARTVGSGEVVLIRRDSKWNVPEPELTLFCTSSGKIVGYTIGNDMSSR
DIEGENPLYLPQAKSYDASAALGPCVWVPEHPIALDTEISIQINREGETVFSGNIQIN
RMKRNLPELASWLFRETSFPNGVFLMTGTGVVPPNEFTLEVGDEVSIRIEGIGELVNI
VGMR"
misc_feature complement(273856..274476)
/locus_tag="Halhy_0224"
/note="Fumarylacetoacetate (FAA) hydrolase family; Region:
FAA_hydrolase; pfam01557"
/db_xref="CDD:201859"
gene complement(274698..275411)
/locus_tag="Halhy_0225"
/db_xref="GeneID:10584378"
CDS complement(274698..275411)
/locus_tag="Halhy_0225"
/note="COGs: COG3279 Response regulator of the LytR/AlgR
family;
InterPro IPR001789:IPR007492;
KEGG: dfe:Dfer_4524 two component transcriptional
regulator, LytTR family;
PFAM: Signal transduction response regulator, receiver
region; LytTr DNA-binding region;
SMART: Signal transduction response regulator, receiver
region;
SPTR: Two-component system response regulator protein;
IMG reference gene:2504769577;
PFAM: Response regulator receiver domain; LytTr
DNA-binding domain"
/codon_start=1
/transl_table=11
/product="LytTR family two component transcriptional
regulator"
/protein_id="YP_004445011.1"
/db_xref="GI:332662223"
/db_xref="InterPro:IPR001789"
/db_xref="InterPro:IPR007492"
/db_xref="InterPro:IPR011006"
/db_xref="GeneID:10584378"
/translation="MKPIRCAIVEDEAIARQILSRYLADLPDFVLEAVFENALVAQTY
LQEHPIDLLFLDIEMPGLNGLSLLRSLPQPPKVIITTAYREYALEGYDLNAVDYLLKP
ISFERFQLALHKLFELQAFAPAQLPSATETPAFLYFKSGNKWVQVFLEEILYIEGLSN
YVKIVGSKGTTVVYQKMSYLEEKLPAGLFLRIHKSYIVGLNKIAALYATDLEIGGKLL
PVGEKYRPLLKALIGKKTI"
misc_feature complement(274710..275402)
/locus_tag="Halhy_0225"
/note="Response regulator of the LytR/AlgR family
[Transcription / Signal transduction mechanisms]; Region:
LytT; COG3279"
/db_xref="CDD:33090"
misc_feature complement(275064..275390)
/locus_tag="Halhy_0225"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature complement(order(275106..275111,275118..275120,
275169..275171,275220..275222,275244..275246,
275379..275384))
/locus_tag="Halhy_0225"
/note="active site"
/db_xref="CDD:29071"
misc_feature complement(275244..275246)
/locus_tag="Halhy_0225"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature complement(order(275220..275228,275232..275237))
/locus_tag="Halhy_0225"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature complement(275103..275111)
/locus_tag="Halhy_0225"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
misc_feature complement(274719..274988)
/locus_tag="Halhy_0225"
/note="LytTr DNA-binding domain; Region: LytTR;
smart00850"
/db_xref="CDD:197918"
gene complement(275408..276508)
/locus_tag="Halhy_0226"
/db_xref="GeneID:10584379"
CDS complement(275408..276508)
/locus_tag="Halhy_0226"
/note="COGs: COG3275 regulator of cell autolysis;
InterPro IPR010559;
KEGG: dfe:Dfer_4523 signal transduction histidine kinase,
LytS;
PFAM: Signal transduction histidine kinase, internal
region;
SPTR: two component system, sensor protein;
IMG reference gene:2504769578;
PFAM: Histidine kinase"
/codon_start=1
/transl_table=11
/product="signal transduction histidine kinase"
/protein_id="YP_004445012.1"
/db_xref="GI:332662224"
/db_xref="InterPro:IPR003594"
/db_xref="InterPro:IPR010559"
/db_xref="GeneID:10584379"
/translation="MQILKTIQTKYLALHLLFWTIYLVVQALVYMNFYEFETIKIVAE
TGAEIIERSGFPDTFWTSLWVQGLELPGKLLAVYLHLWVMIEGFLFRRRFALYLFGLI
LILLLANVVQAVVMQFLPVPAFMKMPHQAQVLSLTRSLQYIFTCLAVVGFTGALVVLQ
RYYAEYNRRQEVEKQHIATELQLLKAQIHPHFFFNTLNSLYGLAMEKSEQTPGMILRL
SELMNFVLYEAKAKDVPLLREIEIIEDYIALEKVRYGERVQVAVYKTGMIEVWRIPPL
LLLPFVENAFKHGVSPEAAQAWLNISISAEAGHLKCVVENSRVGERPSNGNAGLGLEN
VRRRLELLFPNRHRLSILAEPDSFMVVLELNV"
misc_feature complement(275729..275971)
/locus_tag="Halhy_0226"
/note="Histidine kinase; Region: His_kinase; pfam06580"
/db_xref="CDD:203479"
misc_feature complement(<275483..275680)
/locus_tag="Halhy_0226"
/note="Histidine kinase-, DNA gyrase B-, and HSP90-like
ATPase; Region: HATPase_c; pfam02518"
/db_xref="CDD:202270"
gene 276640..278043
/locus_tag="Halhy_0227"
/db_xref="GeneID:10584380"
CDS 276640..278043
/locus_tag="Halhy_0227"
/note="COGs: COG1680 Beta-lactamase class C and other
penicillin binding protein;
InterPro IPR001466;
KEGG: cja:CJA_2859 beta-lactamase;
PFAM: Beta-lactamase-related;
SPTR: Beta-lactamase;
IMG reference gene:2504769579;
PFAM: Beta-lactamase"
/codon_start=1
/transl_table=11
/product="beta-lactamase"
/protein_id="YP_004445013.1"
/db_xref="GI:332662225"
/db_xref="InterPro:IPR001466"
/db_xref="InterPro:IPR012338"
/db_xref="GeneID:10584380"
/translation="MKNLLFALFTLLCISARAQNPAFQKIDQLLTGLAKDHQFSGSVL
VAWKGEVFKKGYGTSNREAQTAFTPQTISCIGSVTKQFTGAAILKLEMMGKLNVQDPI
TKYFEQVPADKQGITLHHLLTHSAGFPGAIGDDYASIDGKTFAQQAFAKPLLFEPGKQ
YEYSNVGFSLLGIVIEKITGESYEVFLNKQLFKPAGMAQTGYVLPKWETNSVATGYRG
ERNWGKINEKNWATDGPYWHLRANGGILSNVEDLYKWHQALLGDKILSKAAKTKYYAK
HIEEGEGAGSYYGYGWAIFPTPRQTTLIAHNGGNGVFFCDFLRYVDEDITVILLTNAA
RREWGRLATVCARTCFDPTFVPELKISDVSNAMSPDQAPHQELIDNFLNAISSGDEAK
IKAMIEANFAPGFKEDFPLEEHLKILKKVGGDLKGHELATVNVSDESITLNFTGSPLK
INVEVVGGKIAGIGVDN"
misc_feature 276700..277638
/locus_tag="Halhy_0227"
/note="Beta-lactamase class C and other penicillin binding
proteins [Defense mechanisms]; Region: AmpC; COG1680"
/db_xref="CDD:31866"
misc_feature 276715..277635
/locus_tag="Halhy_0227"
/note="Beta-lactamase; Region: Beta-lactamase; pfam00144"
/db_xref="CDD:201034"
gene complement(278257..281181)
/locus_tag="Halhy_0228"
/db_xref="GeneID:10584381"
CDS complement(278257..281181)
/locus_tag="Halhy_0228"
/note="COGs: COG2319 FOG: WD40 repeat;
InterPro IPR001680:IPR019781:IPR011600;
KEGG: cni:Calni_0859 WD40 repeat, subgroup;
PFAM: Peptidase C14, caspase catalytic; WD40 repeat,
subgroup;
SMART: WD40 repeat;
SPTR: WD40 repeat, subgroup;
IMG reference gene:2504769580;
PFAM: Caspase domain; WD domain, G-beta repeat"
/codon_start=1
/transl_table=11
/product="peptidase C14 caspase catalytic subunit p20"
/protein_id="YP_004445014.1"
/db_xref="GI:332662226"
/db_xref="InterPro:IPR011046"
/db_xref="InterPro:IPR011600"
/db_xref="InterPro:IPR015943"
/db_xref="InterPro:IPR017986"
/db_xref="InterPro:IPR019775"
/db_xref="InterPro:IPR019781"
/db_xref="InterPro:IPR019782"
/db_xref="GeneID:10584381"
/translation="MKNATHPSFFRRNVLYGYALLLALCYFLPGPPLTAQSETAPILS
LNMNMHTADIKRISVDNRGRKMLSVSKDKTAKLWDIATGALLRTFRSPIGAEDEGALY
AGAISPDGRWVALGGWTGKNSEDKNIYLFDVASGEMVKRLSGLPDVVFDIEYSPDGRY
LAATLGSEGLLVWRCSDWTLFKTDEDYAKDAYNLAFDAWGRLATVCDDGYLRVYKADF
TLEKKIRTTGGKEPFSLAFSPNGQYLALGYSDSPTIQVLDARSLELLYAPNISAASTI
DDRLMIVAFSADGQYLAAGGFYSLFQDGAWWHQVRVWQDAGKGAYTDYQAADNSILDI
KALPMGGFVFGGSQPDWGGFDPGVGQRTHYAKVDVFNYGAKNKSHFRLGGNGEEIGIT
PVSDSPLTFVVPTRHLSATASVQPTFFTERNGLKLSDWSDARNPKLNGKTLTFLDEYE
NCYCVDIANGGGGIVLGTDWYIRLCDALGQERWNRSVPSAAWCVKIDALNRVVAAGLG
DGTICWYNYQNGQPLLSLFIHPDRKRWVLWTPSGYYDAAPGAEEFLGWHLNQGQDKAA
EFYPLSKFRSTYHRPDVIDLILETLDEAEALRQANAAAGKRPQSVGRNIVQELPPTVR
IHSPSDGTEVTENTVRLQYSIDSPNAEPITSLRIQIDGRPVSTERGFKPLAQRLEATV
VLPNGKCQVSIIAENRFGTSVPATLNLVGKRVATPGPGFELRPKLYVLAIGVSKYSHK
DINKLDYAAKDANDFVACVRKQKGLLYHDVVVKTLTEAQASKDSILNGFDWLVSQTTS
RDVAMLFFAGHGVDDNSGNFYYLPANANPEELRRSAVSQGDVQSTVRSVAGKILVFMD
ACHSGSLMRPIMRRSDLAPDIAAVVNELSAAENGAITFSSATTREFALEDPSWQNGAF
TKALVEGLSGKAVVPGQNRITVKSLDAYVSERVKVLTNGKQHPATVFPPNVPDFPIGM
VK"
misc_feature complement(<280294..>281058)
/locus_tag="Halhy_0228"
/note="FOG: WD40 repeat [General function prediction
only]; Region: COG2319"
/db_xref="CDD:32473"
misc_feature complement(280240..281034)
/locus_tag="Halhy_0228"
/note="WD40 domain, found in a number of eukaryotic
proteins that cover a wide variety of functions including
adaptor/regulatory modules in signal transduction,
pre-mRNA processing and cytoskeleton assembly; typically
contains a GH dipeptide 11-24 residues from...; Region:
WD40; cl02567"
/db_xref="CDD:207648"
misc_feature complement(order(280240..280245,280261..280263,
280300..280302,280363..280368,280408..280413,
280432..280434,280447..280449,280492..280497,
280531..280533,280540..280542,280558..280560,
280570..280572,280621..280626,280660..280665,
280681..280683,280696..280698,280747..280749,
280786..280791,280807..280809,280840..280842,
280891..280893,280909..280911,280945..280950,
280966..280968,280978..280980,281032..281034))
/locus_tag="Halhy_0228"
/note="structural tetrad; other site"
/db_xref="CDD:29257"
misc_feature complement(279502..280761)
/locus_tag="Halhy_0228"
/note="FOG: WD40 repeat [General function prediction
only]; Region: COG2319"
/db_xref="CDD:32473"
misc_feature complement(279556..280485)
/locus_tag="Halhy_0228"
/note="WD40 domain, found in a number of eukaryotic
proteins that cover a wide variety of functions including
adaptor/regulatory modules in signal transduction,
pre-mRNA processing and cytoskeleton assembly; typically
contains a GH dipeptide 11-24 residues from...; Region:
WD40; cl02567"
/db_xref="CDD:207648"
misc_feature complement(order(279595..279600,279634..279639,
279655..279657,279670..279672,279721..279726,
279754..279759,279775..279777,279784..279786,
279838..279843,279886..279888,279892..279894,
279955..279957,279970..279972,280027..280029,
280069..280074,280102..280104,280150..280152,
280201..280206,280240..280245,280273..280275,
280300..280302,280366..280371,280408..280413,
280432..280434,280444..280446))
/locus_tag="Halhy_0228"
/note="structural tetrad; other site"
/db_xref="CDD:29257"
misc_feature complement(278311..279000)
/locus_tag="Halhy_0228"
/note="Caspase domain; Region: Peptidase_C14; pfam00656"
/db_xref="CDD:201376"
gene complement(281502..282479)
/locus_tag="Halhy_0229"
/db_xref="GeneID:10584382"
CDS complement(281502..282479)
/locus_tag="Halhy_0229"
/note="KEGG: dfe:Dfer_0571 hypothetical protein;
SPTR: uncharacterized protein;
IMG reference gene:2504769581"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004445015.1"
/db_xref="GI:332662227"
/db_xref="GeneID:10584382"
/translation="MSHTPQSLKQLLARGRTDLVLNGLLEHTANLTDKVPHNTVIALS
SRWKNNEAENNAGIIGLEDYKLEKSRINKAVLALIDELWSNESSGGVVSVVPSKFNWK
KWTAIAVTTLGILGAIAEFSGWSLRDLFAHQTEQPRGKTDTTAQIKPDTTKDIEVESA
QTQTRGVKLLQKPTSTKNTSASLPAPLHITCTSNKGRNNPQFYAGEIMRFYYSVNRPC
HVRCIYQLADGRLVLFDEDQQANATQGIPTEIGAGFVAAAPFGPERLYLFASTAAFPT
LHTKTDPDGYAFIVDGLPQALQKTRGFKKLQQIVETQLNLNTLEEKINQ"
misc_feature complement(281667..281882)
/locus_tag="Halhy_0229"
/note="Domain of unknown function (DUF4384); Region:
DUF4384; pfam14326"
/db_xref="CDD:206494"
gene complement(282684..286151)
/locus_tag="Halhy_0230"
/db_xref="GeneID:10584383"
CDS complement(282684..286151)
/locus_tag="Halhy_0230"
/note="COGs: COG4196 conserved hypothetical protein;
InterPro IPR002931:IPR013589:IPR018667;
KEGG: chu:CHU_1392 transglutaminase-like enzyme, cysteine
protease;
PFAM: Protein of unknown function DUF2126; Bacterial
transglutaminase-like, N-terminal; Transglutaminase-like;
SMART: Transglutaminase-like;
SPTR: uncharacterized protein;
IMG reference gene:2504769582;
PFAM: Transglutaminase-like superfamily; Bacterial
transglutaminase-like N-terminal region; amidoligase
enzyme (DUF2126)"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004445016.1"
/db_xref="GI:332662228"
/db_xref="InterPro:IPR002931"
/db_xref="InterPro:IPR013589"
/db_xref="InterPro:IPR018667"
/db_xref="GeneID:10584383"
/translation="MAIKVAIRHSTHYEYDRLIKLWPQTIRLRPAVHSRTEIAAYSLK
ILPEPHFINWQQDPFGNFLARVVFPDKVKEFKIDVEVIAELRAINPFDFFLEEYAERF
PFKYEEQLLKELAPYLEITERGPLLMQFIEDSKKFLNDSTNNFLVNINQNLNRQVNYS
IRMEAGIQTCEETLGKALGSCRDSGWVLVQALRHFGLAARFVSGYLVQLKADQKALDG
PSGAAEDFTDLHAWTEVYIPGAGWIGLDPTSGLLAEAGHIPLACTPYPASAAPISGSM
EPCHTTFHFSNKVDRIHEDPRVTKPYSDGQWADVIALGHHVEQELQAGDVRLTMGGEP
TFVSVDDMESEQWNGAADGVEKRKLGNVLVHKLKDIFGKGGFVHYGMGKWYPGEPIPR
WAYSLFWRKDGLPMWRKPQWLANLDGEYKYEHTDAEKFIRELAKFIGINPNNIKPGFE
DVFYYLWEEGNLPANVDPFKVDLRDSVERRTLMEVLERGLDKPNGYALPIGWNRDTET
WWSCVWEFSREHMFLLPGNSPMGLRMPLNRLPVLAPEQKEEPIERDPFEKVGILGEYY
DKVGGRYDSPPDERVPKRVSDPKVYAEEEIDEEEAKLKDPQYFIKKKKEEAEKDTFRP
TRQMNTLRTAICVEAREGKIYIFMPPCELIEHYLELLAAIESTAERLKIPVIIEGYEP
PRDNRVEKLGVTPDPGVIEVNIQPAKNWSEVLHIYDHVFEAARQSRLGSEKFMLDGRH
TGTGGGNHVTIGGVTPEDSPMLRRPDLLRSLLCFWQNHPGLSYLFSTAFIGPTSQAPR
VDEGRQEMLYELEIAFDQIPEPGEENLPFWLTDRIFRNILVDITGNTHRAEFCIDKLY
RPDSSAGRLGILELRAFDMPPSKEMCLVQILLLRTLIAWFWKQPYRQKLVRWGTELHD
KYLLHHYVREDLRDVCAQLQAAGFNFKIEWLEPFFEFRFPFLGRAQVGDVGMVLRSAI
EPWNVLGEEMSNSGTARFVDSSLERLEVKVTGITSDRYQLLCNGFRIPLRSTGIHGEY
VAGIRYKAWEPPSAMHPNLEADVPLVIDVYDTWNKRSIGGCTYHVAHPGGRAYETYPV
NSFEAEGRRISRFWDYGHTQAAMTVAPTVDVPTREIQELPPREVAPPKEIPAVAESNW
SLDLRRKRR"
misc_feature complement(285243..286151)
/locus_tag="Halhy_0230"
/note="Transglutaminase-like enzymes, putative cysteine
proteases [Amino acid transport and metabolism]; Region:
COG1305"
/db_xref="CDD:31496"
misc_feature complement(285897..286142)
/locus_tag="Halhy_0230"
/note="Bacterial transglutaminase-like N-terminal region;
Region: Bact_transglu_N; pfam08379"
/db_xref="CDD:149443"
misc_feature complement(285411..>285641)
/locus_tag="Halhy_0230"
/note="Transglutaminase-like superfamily; Region:
Transglut_core; pfam01841"
/db_xref="CDD:202005"
misc_feature complement(282807..285326)
/locus_tag="Halhy_0230"
/note="Putative amidoligase enzyme (DUF2126); Region:
DUF2126; pfam09899"
/db_xref="CDD:150558"
misc_feature complement(282687..285299)
/locus_tag="Halhy_0230"
/note="Uncharacterized protein conserved in bacteria
[Function unknown]; Region: COG4196"
/db_xref="CDD:33931"
gene 286485..287945
/locus_tag="Halhy_0231"
/db_xref="GeneID:10584384"
CDS 286485..287945
/locus_tag="Halhy_0231"
/note="COGs: COG2308 conserved hypothetical protein;
InterPro IPR007297:IPR007302;
KEGG: hypothetical protein;
PFAM: Protein of unknown function DUF404, bacteria
N-terminal; Protein of unknown function DUF407;
SPTR: uncharacterized protein;
IMG reference gene:2504769583;
PFAM: Domain of unknown function (DUF407); Domain of
unknown function (DUF404)"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004445017.1"
/db_xref="GI:332662229"
/db_xref="InterPro:IPR007297"
/db_xref="InterPro:IPR007302"
/db_xref="InterPro:IPR016450"
/db_xref="GeneID:10584384"
/translation="MTTKSNLFQHYPLNPAFFDEVFQKDGRVYPHYEDIHRQFSQLTS
KDFERLNEYAKLSFLNQGITYAVYSDGHKGAEQIFPFDLFPRIIPSTDWNKLERGLIQ
RNVALNLFIQDVYGDRKILKDKIVPSALIFSSPHYSEEMKSIKPQNGIYCHISGTDLI
RHSDGEYYVLEDNLRSPSGVSYVLSNRDAMKRTLSNAFRWANVRSVNEYPAELLATLQ
SVAPVTDDQPTCALLTPGTYNSAYYEHSFLAQTMGIELVEGGDLFVENNYVFMRTIRG
PKRVDVIYRRIDDAFLDPLVFRPESMLGVPGIMGAYRAGNITIVNAPGTGVADDKAVC
SYVPAMIRYYLDEEPIIPNVPTYLCEREEDLKYVLEHTRDLVIKPVDMSGGYGVLVCD
RLSSAELEDIKLKIQADPRNYIAQPRMSLSVHSTYIENKGEFEPRHIDLRTFTLMGKD
RQFVLPGGLSRVALKEGSLIVNSSQGGGSKDTWVLV"
misc_feature 286509..287939
/locus_tag="Halhy_0231"
/note="Uncharacterized conserved protein [Function
unknown]; Region: COG2308"
/db_xref="CDD:32462"
misc_feature 286737..287732
/locus_tag="Halhy_0231"
/note="A circularly permuted ATPgrasp; Region:
CP_ATPgrasp_1; pfam04174"
/db_xref="CDD:202916"
gene 288150..289115
/locus_tag="Halhy_0232"
/db_xref="GeneID:10584385"
CDS 288150..289115
/locus_tag="Halhy_0232"
/note="COGs: COG2307 conserved hypothetical protein;
InterPro IPR007296;
KEGG: hypothetical protein;
PFAM: Protein of unknown function DUF403, bacteria;
SPTR: uncharacterized protein;
IMG reference gene:2504769584;
PFAM: Bacterial domain of unknown function (DUF403)"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004445018.1"
/db_xref="GI:332662230"
/db_xref="InterPro:IPR007296"
/db_xref="GeneID:10584385"
/translation="MTLAVGKRANMLARIANTLYWMGRYLERTEHLARYLRVQYFTTQ
DAPMSQNRDFVLGSIVNMAGIPWEEGKPFVESEILHAVALDTNNPMSILSAITSAREN
ARGMRNIISTELWEVINKYYHFVNNYPVSYFKTRGLYDFTLNAGEHCSVIRGYMDSTL
THNDVWALIRLGVHLERTTQIARIISCKLYDIYVLTGQNENMSVENYQYTVLLKLLEG
FDMNRHHYKAAPDRQKTMEFLILNADFPRSLAFNLRQIQYFVRKLGLREHTPDSIGFV
VGRLCAQYQYLLYPEIEDKVGEFVSETLAKVYELHGSLDKNYFHV"
misc_feature 288180..289106
/locus_tag="Halhy_0232"
/note="A predicted alpha-helical domain with a conserved
ER motif; Region: Alpha-E; pfam04168"
/db_xref="CDD:202915"
gene 289130..290023
/locus_tag="Halhy_0233"
/db_xref="GeneID:10584386"
CDS 289130..290023
/locus_tag="Halhy_0233"
/note="COGs: COG1305 Transglutaminase-like protein;
InterPro IPR002931;
KEGG: rbi:RB2501_15594 hypothetical protein;
PFAM: Transglutaminase-like;
SMART: Transglutaminase-like;
SPTR: uncharacterized protein;
IMG reference gene:2504769585;
PFAM: Transglutaminase-like superfamily"
/codon_start=1
/transl_table=11
/product="transglutaminase domain-containing protein"
/protein_id="YP_004445019.1"
/db_xref="GI:332662231"
/db_xref="InterPro:IPR002931"
/db_xref="GeneID:10584386"
/translation="MADYVVEYRTLTEYERTVKQGAYEFLIMPCENETQKLKHHRLIH
SMRRSPFMANNKYGFVTLHFHINSETFDYFSLSLLAQVAKNMPPMDLCSLLRVPDERA
FLEDLNFQMDQQSFLQATPLSTLRQSDFPMELLLQPHELIGNYLLRLNSSIYSMLQYA
TGSTNTSTSALTAIKGGRGVCQDFAHIMIGILRQQCIPARYVAGYLNLSDNRADSQLH
AWVEVFIPQLGWRGFDPTNNIQEDDHFIKIAHGRDYKDCQPIKGVLVTQGVHKTSYEV
SVRNSNDYNWFLLEQQQQQQQ"
misc_feature 289130..289933
/locus_tag="Halhy_0233"
/note="Transglutaminase-like enzymes, putative cysteine
proteases [Amino acid transport and metabolism]; Region:
COG1305"
/db_xref="CDD:31496"
misc_feature <289604..289834
/locus_tag="Halhy_0233"
/note="Transglutaminase-like superfamily; Region:
Transglut_core; pfam01841"
/db_xref="CDD:202005"
gene 290147..290869
/locus_tag="Halhy_0234"
/db_xref="GeneID:10584387"
CDS 290147..290869
/locus_tag="Halhy_0234"
/note="COGs: COG3484 proteasome-type protease;
KEGG: chu:CHU_3460 proteasome-type protease;
SPTR: Proteasome-type protease;
IMG reference gene:2504769586"
/codon_start=1
/transl_table=11
/product="proteasome-type protease"
/protein_id="YP_004445020.1"
/db_xref="GI:332662232"
/db_xref="GeneID:10584387"
/translation="MTYCLGIKVRSGLVAIADTRITSGTETATAKKISIHENGRNSLF
LMTSGLRSIRDKAVTYFEELFEDESFKFDKMYKAVNMFGEQLRRVAQEDKRALAESGM
FFNLYAIVGGQLENDKEHMLYLLYPEGNWIEVGEGSPFTIIGNSGYGKPILNRALNYE
SSLRFAFKTGFLSFDSTRVSANDVGYPIDVALYPRDSYKLQQHRLEEKDTAQIGQMWA
SKLKNSIDEIPETWMDAFLNKE"
misc_feature 290147..290836
/locus_tag="Halhy_0234"
/note="Predicted proteasome-type protease
[Posttranslational modification, protein turnover,
chaperones]; Region: COG3484"
/db_xref="CDD:33287"
misc_feature 290150..290833
/locus_tag="Halhy_0234"
/note="The Ntn hydrolases (N-terminal nucleophile) are a
diverse superfamily of of enzymes that are activated
autocatalytically via an N-terminally lcated nucleophilic
amino acid. N-terminal nucleophile (NTN-) hydrolase
superfamily, which contains a...; Region: Ntn_hydrolase;
cl00467"
/db_xref="CDD:212223"
misc_feature order(290150..290152,290198..290200,290204..290206,
290240..290242)
/locus_tag="Halhy_0234"
/note="active site"
/db_xref="CDD:48436"
gene complement(291036..292703)
/locus_tag="Halhy_0235"
/db_xref="GeneID:10584388"
CDS complement(291036..292703)
/locus_tag="Halhy_0235"
/note="COGs: COG2759 Formyltetrahydrofolate synthetase;
HAMAP: Formate-tetrahydrofolate ligase, FTHFS;
InterPro IPR000559;
KEGG: bfs:BF2256 formate--tetrahydrofolate ligase;
PFAM: Formate-tetrahydrofolate ligase, FTHFS;
PRIAM: Formate--tetrahydrofolate ligase;
SPTR: Formate--tetrahydrofolate ligase;
IMG reference gene:2504769587;
PFAM: Formate--tetrahydrofolate ligase"
/codon_start=1
/transl_table=11
/product="Formate--tetrahydrofolate ligase"
/protein_id="YP_004445021.1"
/db_xref="GI:332662233"
/db_xref="InterPro:IPR000559"
/db_xref="GeneID:10584388"
/translation="MKTDIEIAQGIALQPIANIAAALGIPAPALIPYGHYKAKVQYTE
IDEAKVAQSKLILVTAITPTKAGIGKTTVGVALAQGLQQLGKKAIVALREPSLGPCFG
MKGGACGGGYAQVVPMEDINLHFTGDFHAITSANNMIAALLDNYQYQHRGTELALKQI
TWRRVLDVNDRSLRFIVSGLNGPGNGIPQETGFDITPASEIMAIFCLASSLDDLRRRI
DNILLGYTHHNQPFTVADLGVGGAITVLLKDALNPNLVQTLEAGPAFIHGGPFANIAH
GCNSIMATKMAMTYGDYVITEAGFGADLGAEKFLNIKCRQAGIYPKASVLVATSQALK
LHGNVTLADIKKPNLKGLQAGLKNLERHLENLQHFGQSVVVTFNQYSFDTAEEMDYTA
QWCREKGADFALNNGFAEGGRGALPLAEKVVEVIEKRPSQPIRHTYALEDSIPEKIHK
VVTQIYRGKEVVFSKTAETALKKIETLGLAHLPVCIAKTQYSFSDDAAHIGVASDFTL
NIENVIINRGAGFIVAVAGEIMRMPGLPKDPQALHIDVVDGKVVGLS"
misc_feature complement(291039..292703)
/locus_tag="Halhy_0235"
/note="formate--tetrahydrofolate ligase; Provisional;
Region: PRK13505"
/db_xref="CDD:184096"
misc_feature complement(291084..292607)
/locus_tag="Halhy_0235"
/note="Formyltetrahydrofolate synthetase (FTHFS) catalyzes
the ATP-dependent activation of formate ion via its
addition to the N10 position of tetrahydrofolate. FTHFS is
a highly expressed key enzyme in both the Wood-Ljungdahl
pathway of autotrophic CO2...; Region: FTHFS; cd00477"
/db_xref="CDD:73210"
misc_feature complement(order(292320..292322,292422..292424))
/locus_tag="Halhy_0235"
/note="Potassium binding sites [ion binding]; other site"
/db_xref="CDD:73210"
misc_feature complement(order(292335..292343,292419..292424))
/locus_tag="Halhy_0235"
/note="Cesium cation binding sites [ion binding]; other
site"
/db_xref="CDD:73210"
gene complement(292823..293452)
/locus_tag="Halhy_0236"
/db_xref="GeneID:10584389"
CDS complement(292823..293452)
/locus_tag="Halhy_0236"
/note="IMG reference gene:2504769588"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004445022.1"
/db_xref="GI:332662234"
/db_xref="GeneID:10584389"
/translation="MTNRISLFGAFFLLMLAESYTQLENIWLKEEISLNTLQPSLAIE
ASTATDLVCLAPGGIAVKSLQPGVPLDVVVTVKNISGRALCLQTDQQLITVSQCYDMV
IPAIALLEPLPLELRLDTNQTATTKLRLTTSEPFNPAPGCTAFAIMRVWLLDPTVDPI
YSEYHDMVISFGENAPVTPQTIAEPKQLLTFLRSSVGNGKITAKNCVFL"
gene 294180..296723
/locus_tag="Halhy_0237"
/db_xref="GeneID:10584390"
CDS 294180..296723
/locus_tag="Halhy_0237"
/note="KEGG: dfe:Dfer_3925 conserved hypothetical protein,
membrane or secreted;
SPTR: uncharacterized protein;
IMG reference gene:2504769589"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004445023.1"
/db_xref="GI:332662235"
/db_xref="GeneID:10584390"
/translation="MKRLTSLSLLCLFILLTCSVGQAQDKKPDVPPSTPPATPATPPA
APKNEPKPFREVITAKAKSSKGLVNVHKVDDKWYFEIPDSVFNREIMAITRYTKTAAG
GGIFGGEEINSQVVAWEKGPDNKVFLRSISYIIASPDSTKPIFKAVKNSSVDPIIGAF
DVKSIRKDTSILIEVTDLFKGDNQVFSLSPFLKQLYKISDFKADRSYIQSIRTFPINT
EIRTVKTFGSQSPPITPSPIPQPGVYLPAGVQAGVVTMEFNTSMIILPKKPMRKRFFD
PRVGYFSSSYGTFEEESQKSDEEVFAVRWRLEPKNAVDALRQKKGELIEPAKPIIYYI
DPATPVKWRKYLKLGVDDWQKAFEKAGWKNAIRGEYWPEQDTTMSLEDARFSVIRYFA
AEIQNAYGPNVNDPRSGEILESHIGWYHNVMRLLRNWYLIQTAASDPRARKKDFDDEL
MGQLIRFVSSHEVGHTLGLRHNMGASSATPVEKLRDKAWVAQNGHTSSIMDYARFNYV
AQPEDGVTDFFPRIGDYDIWAIEWGYKYFADAKSAEDEKKLLNETTKEKVKNARLTFG
TEVSPMDPRYQTEDLGDNAMKASDYGIKNLKRILPNLPEWSKENGESYTELEEMYNNV
VAQFRRYMGHVTKNVGGIYDTPKTYDMAGAVYEVVPKERQKEAIAFLSTQLFETPSWM
LEANILNKIRPDVGVESIKSLQEGTLNSLLAGDRIVRLLETGKEGNYTVDELMTDLRN
SIWSELKSQKSIDIYRRNLQKVFVERAITMLSPKDPATLLYVPPGQAYGFATRRVDLK
TTDLPSITRGHLESLLSEIRATIGSAPDKMSRYHLEDVANRIDTALHPK"
misc_feature 295140..295787
/locus_tag="Halhy_0237"
/note="Zinc-dependent metalloprotease; MMP_like sub-family
2. A group of bacterial metalloproteinase domains similar
to matrix metalloproteinases and astacin; Region:
ZnMc_MMP_like_2; cd04276"
/db_xref="CDD:58576"
misc_feature order(295560..295565,295572..295574,295590..295592)
/locus_tag="Halhy_0237"
/note="active site"
/db_xref="CDD:58576"
gene 296847..297527
/locus_tag="Halhy_0238"
/db_xref="GeneID:10584391"
CDS 296847..297527
/locus_tag="Halhy_0238"
/note="COGs: COG3201 Nicotinamide mononucleotide
transporter;
InterPro IPR006419;
KEGG: gym:GYMC10_6275 nicotinamide mononucleotide
transporter PnuC;
PFAM: Nicotinamide mononucleotide transporter PnuC;
SPTR: Nicotinamide mononucleotide transporter PnuC;
TIGRFAM: Nicotinamide mononucleotide transporter PnuC;
IMG reference gene:2504769590;
PFAM: Nicotinamide mononucleotide transporter;
TIGRFAM: nicotinamide mononucleotide transporter PnuC"
/codon_start=1
/transl_table=11
/product="nicotinamide mononucleotide transporter PnuC"
/protein_id="YP_004445024.1"
/db_xref="GI:332662236"
/db_xref="InterPro:IPR006419"
/db_xref="GeneID:10584391"
/translation="MSTPIRWNTYEISWLLIFSIIAMVLSILWKNSWFDFSVFLSGVL
CVVLAAKGHVWTYFFGMYNSFAYAYLAYNNGLFGEMGLNLFFFVPMNIVGYLLWKPNL
DGTYVQMRAMASPQTLLVVLTNLLGIAIMGYFLAKIPGQNTPYIDATTNVLSIVATIL
MVFRYREQWLLYILLNIFTVLMWSIRTAEGSAEGPLMIVMWTAYLINAGYGYYNWSIG
AKQNSMFV"
misc_feature 296940..297491
/locus_tag="Halhy_0238"
/note="Nicotinamide mononucleotide transporter; Region:
NMN_transporter; pfam04973"
/db_xref="CDD:147247"
gene 297623..298636
/locus_tag="Halhy_0239"
/db_xref="GeneID:10584392"
CDS 297623..298636
/locus_tag="Halhy_0239"
/note="COGs: COG3172 ATPase/kinase involved in NAD
metabolism;
KEGG: gym:GYMC10_6274 cytidyltransferase-related domain
protein;
SPTR: Cytidyltransferase-related domain protein;
IMG reference gene:2504769591;
TIGRFAM: nicotinamide-nucleotide adenylyltransferase, NadR
type; cytidyltransferase-related domain"
/codon_start=1
/transl_table=11
/product="cytidyltransferase-related domain-containing
protein"
/protein_id="YP_004445025.1"
/db_xref="GI:332662237"
/db_xref="InterPro:IPR014729"
/db_xref="GeneID:10584392"
/translation="MKTTGLTLGKYAPFHRGHQYVFDTALAECDELVVLIYDTTITPI
PLSVRARWIRTLYPQVTVIEAWDGPEGYSNERAFEIIQEQYILKILAGRNITHFYSSE
FYGDHVSKALGAIDRRLDEKRTAVPISATLIRENPWQYRPFVADVVYRDLITKVVFVG
AMSTGKSTITEALAKKYQTSFAPEYGREYWTQHQVDRRISFAAFDEIAVGHQEREEAA
LRQANRYLFVDTNAITTYQYALDYHGKAPQLLTQLALENAQRYDLFFLCGTDIPYHDT
WDRSGDQKRQVFQKKIIADLKERRIPYLTLSGSLEARMATVKSVLERFVPYENFFGNT
LNF"
misc_feature 297626..298546
/locus_tag="Halhy_0239"
/note="nicotinamide-nucleotide adenylyltransferase, NadR
type; Region: nadR_NMN_Atrans; TIGR01526"
/db_xref="CDD:162400"
misc_feature 297632..298069
/locus_tag="Halhy_0239"
/note="nucleotidyl transferase superfamily; Region:
nt_trans; cl00015"
/db_xref="CDD:212170"
misc_feature order(297665..297676,298007..298018)
/locus_tag="Halhy_0239"
/note="active site"
/db_xref="CDD:173912"
misc_feature order(297665..297667,297674..297676,298010..298012)
/locus_tag="Halhy_0239"
/note="nucleotide binding site [chemical binding]; other
site"
/db_xref="CDD:173912"
misc_feature 297665..297676
/locus_tag="Halhy_0239"
/note="HIGH motif; other site"
/db_xref="CDD:173912"
misc_feature 298007..298018
/locus_tag="Halhy_0239"
/note="KMSKS motif; other site"
/db_xref="CDD:173912"
misc_feature 298043..298597
/locus_tag="Halhy_0239"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:213113"
gene complement(298831..301671)
/locus_tag="Halhy_0240"
/db_xref="GeneID:10584393"
CDS complement(298831..301671)
/locus_tag="Halhy_0240"
/note="COGs: COG0296 1 4-alpha-glucan branching enzyme;
InterPro IPR006589:IPR004193:IPR006047;
KEGG: rmr:Rmar_0285 alpha amylase catalytic region;
PFAM: Glycosyl hydrolase, family 13, catalytic region;
Glycoside hydrolase, family 13, N-terminal;
SMART: Glycosyl hydrolase, family 13, subfamily, catalytic
region;
SPTR: Alpha amylase catalytic region;
IMG reference gene:2504769592;
PFAM: Alpha amylase, catalytic domain"
/codon_start=1
/transl_table=11
/product="alpha amylase"
/protein_id="YP_004445026.1"
/db_xref="GI:332662238"
/db_xref="InterPro:IPR006047"
/db_xref="InterPro:IPR013781"
/db_xref="InterPro:IPR013783"
/db_xref="InterPro:IPR014756"
/db_xref="InterPro:IPR017853"
/db_xref="GeneID:10584393"
/translation="MKPNKTTHWLAMLTLCIVTSTSFSQVVWTEPFFPRPDQPVTVYF
DAALGTGGLKDCNCTVYVHTGVLTNASTSTSDWKNVVTTWGQANANWAMSPVAGRPNV
YKYEVKPSIKGFYGVTGSTVVQKMAFVFRNAAGNREGKDTGSKDFFLDVYNQSGLLTA
LITPSNRNQVVAEGTSIPVRAVVSESAELSLLDNGQVLSQSTGLELNYNLLAGAPGNH
KVQFIAATATARDTETFNYLVPIVKAPQDPPGGTQLGINYWASGDKVTLALYAPGKVG
IYVIGDFNDWTISAEYLLNRSISGLIHWIDLPALKSGETYRFQYVVDGTRRIGDPYST
LVLDPDNDRFISAQTFPNLPAYPSGKTTGIVSVMQPGKAVYPWKIDNFQRPAKEKLVV
YELLLRDFTARHDYQSLIDTLNYFQGLGINAIELMPINEFEGNVSWGYNPSYHMALDK
YYGTPEKFKEFVDACHARGIAVILDVVFNHAFSQSPLAQLYWDDANFRPSADNPWLNV
TAKHDFNVGYDFNHESIATKEFVKKVLQFWLAEYRVDGFRFDLSKGFTQKQTLGNVPL
WGNYDASRVAIWNDYAGFIRSNSTDAYIILEHFADNNEETELINNGMLVWGNHNFQFN
EATMGYANNLSGLDYRTRGWTNPGAINYMESHDEERLMYKNLQFGNEAGGYSVKNTST
ALKRQELAAVLFYSIPGPKMLWQFGELGYDYSINHCTNGTVNNACRLDPKPIRWDYLN
QPERKQLFEVTRSLLFLRKNYEVFHTKDFTAQLSSSSEKQTILRSADLNVVVAGNFGV
SSSSFTVNFPAAGKWYNYFTRDSITVTGTSQTISFQAGQYNMWTSRKLPNAPTLILTN
TREELQARHQLEVFPNPTQGAIQVRFTLPEAEWVKVQLFNNLGQVVTTLAQGQMGAGP
QQVKWNEKLSPGLYYLRMQVGRWVLSQAVVVQ"
misc_feature complement(<300679..300882)
/locus_tag="Halhy_0240"
/note="Early set domain associated with the catalytic
domain of sugar utilizing enzymes at either the N or C
terminus; Region: E_set; cl09101"
/db_xref="CDD:211508"
misc_feature complement(299368..300549)
/locus_tag="Halhy_0240"
/note="Alpha amylase catalytic domain found in an
uncharacterized protein family; Region: AmyAc_4; cd11350"
/db_xref="CDD:200488"
misc_feature complement(299257..300459)
/locus_tag="Halhy_0240"
/note="Glycosidases [Carbohydrate transport and
metabolism]; Region: AmyA; COG0366"
/db_xref="CDD:30715"
misc_feature complement(order(299701..299706,299881..299883,
300019..300024,300028..300030,300232..300234))
/locus_tag="Halhy_0240"
/note="active site"
/db_xref="CDD:200488"
misc_feature complement(order(299701..299703,299881..299883,
300022..300024))
/locus_tag="Halhy_0240"
/note="catalytic site [active]"
/db_xref="CDD:200488"
misc_feature complement(298834..299067)
/locus_tag="Halhy_0240"
/note="Por secretion system C-terminal sorting domain;
Region: Por_Secre_tail; TIGR04183"
/db_xref="CDD:200434"
misc_feature complement(<298873..299046)
/locus_tag="Halhy_0240"
/note="FlgD Tudor-like domain; Region: FLgD_tudor;
pfam13861"
/db_xref="CDD:206032"
gene complement(302114..303703)
/locus_tag="Halhy_0241"
/db_xref="GeneID:10584394"
CDS complement(302114..303703)
/locus_tag="Halhy_0241"
/note="COGs: COG4249 Uncharacterized protein containing
caspase domain;
InterPro IPR011600;
KEGG: glo:Glov_1080 peptidase C14 caspase catalytic
subunit P20;
PFAM: Peptidase C14, caspase catalytic;
SPTR: uncharacterized protein;
IMG reference gene:2504769593;
PFAM: Caspase domain"
/codon_start=1
/transl_table=11
/product="peptidase C14 caspase catalytic subunit p20"
/protein_id="YP_004445027.1"
/db_xref="GI:332662239"
/db_xref="InterPro:IPR001309"
/db_xref="InterPro:IPR011600"
/db_xref="GeneID:10584394"
/translation="MFLLTALCCSIFATAQGKKPSETIQKLAYDEITLNDIKRTSLRS
DQAFSLARDRSDPLVFAYRTNEGRYGKFELLSHMPTMIHIRWTTYNADGTVYRGGGAN
LSVPIGVGCDLDLGSAEGVEGTDFIWVNRQTRDPYRLEPRYGAGFSRYVLSNQVETDN
KTEDPNPDKSNPAGKEASVKTNPGKTENPQVDNATKIVWNYPISNHTTTNTPTLALKA
CVETTEPIKEYILVQNGQRSFTARGLIVQQANDCFNAYNKTVTLKTGDNQFQLIAQSN
AGELQSEVFTITYDPNATTSNPRSNATSQRRLALVIGNAAYPTAGLKNPVNDATDIAT
ALRAMGFEVISATNANRLKMNTAIDDFGSRLKDYDLGFFYYAGHGLQVKGENYLVPID
ATPKSQGEVEYDCYPVGKILAKMEDAANRANIIVLDACRDNPLQRSWSRSTGSNGLAN
INAPQGTFIGFATSPGSTAADGTGRNGVYTGALLEHIRKPNLTVDQLFNFVNGTVKKL
TNNLQIPWKASSMSEDLYLTK"
misc_feature complement(302123..302785)
/locus_tag="Halhy_0241"
/note="Caspase domain; Region: Peptidase_C14; pfam00656"
/db_xref="CDD:201376"
gene complement(303906..304226)
/locus_tag="Halhy_0242"
/db_xref="GeneID:10584395"
CDS complement(303906..304226)
/locus_tag="Halhy_0242"
/note="IMG reference gene:2504769594"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004445028.1"
/db_xref="GI:332662240"
/db_xref="GeneID:10584395"
/translation="MLFISFCLCSPSFAQSSCSAISVAEVEGFKAELASIRQWSDLDN
TNNGTTGAYALAAQSQNSGIISAQKKLDEFIEWNQNNVGTALVNYAQAFLWNGYCDEI
EKAL"
gene 304756..305685
/locus_tag="Halhy_0243"
/pseudo
/db_xref="GeneID:10584396"
gene complement(305716..306624)
/locus_tag="Halhy_0244"
/db_xref="GeneID:10584397"
CDS complement(305716..306624)
/locus_tag="Halhy_0244"
/note="KEGG: gym:GYMC10_2721 hypothetical protein;
SPTR: uncharacterized protein;
IMG reference gene:2504769596"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004445029.1"
/db_xref="GI:332662241"
/db_xref="GeneID:10584397"
/translation="MSKHHSTPTLLSRPDFRNHTFERDQFKCVICGNPALDAHHIIER
RLFKASHEKGGYFLDNGASLCEIHHIEAEQTILSCQSIREQAGIKTVLLPEHFYADLD
YDKWGNIITSQGRLKGELYYEMSVQETLRNCTFLKYTVHPRVYHLPWSKVEPGDLVLE
DDACFEGEEVVVMQKMSGSPFTAYPDYCHGDRIDEPLPIGMREALLQKTAVLDDDMRI
YGNHQGGVMSLSEVWVKNDCLDWQETQALADLLELSVPSVLFEGLYDEFKLMDFRPNA
SMGYVLRLKKGFRAFDVGRSRVSYSC"
misc_feature complement(306340..>306546)
/locus_tag="Halhy_0244"
/note="HNH nucleases; HNH endonuclease signature which is
found in viral, prokaryotic, and eukaryotic proteins. The
alignment includes members of the large group of homing
endonucleases, yeast intron 1 protein, MutS, as well as
bacterial colicins, pyocins, and...; Region: HNHc;
cl00083"
/db_xref="CDD:213079"
gene complement(306732..307607)
/locus_tag="Halhy_0245"
/db_xref="GeneID:10584398"
CDS complement(306732..307607)
/locus_tag="Halhy_0245"
/note="COGs: COG0388 amidohydrolase;
InterPro IPR003010;
KEGG: pdi:BDI_1175 beta-ureidopropionase;
PFAM: Nitrilase/cyanide hydratase and apolipoprotein
N-acyltransferase;
PRIAM: N-carbamoylputrescine amidase;
SPTR: Beta-ureidopropionase;
IMG reference gene:2504769597;
PFAM: Carbon-nitrogen hydrolase"
/codon_start=1
/transl_table=11
/product="N-carbamoylputrescine amidase"
/protein_id="YP_004445030.1"
/db_xref="GI:332662242"
/db_xref="InterPro:IPR003010"
/db_xref="GeneID:10584398"
/translation="MKVGIVQQTCSTQVDHNIAKSLAGIKACAEQGAELVVLQELHCG
IYFCQAEEADMFDLAEPIPGPAYHTFSQAAKENKVVLVTSLFEKRAPGIYHNTAVVFE
KDGSEAGRYRKMHIPDDPAYYEKFYFTPGDLGFHPIQTSVGKLGVLVCWDQWYPEAAR
LMAMRGAEVLIYPTAIGWAASDPQEEQDRQFGAWQTIQRGHAVANGLPVISVNRTGWE
ADFSGVTEGIRFWGQSFIAGAQGEILYSAPIDEEAIFVLEVDPQRTETVRRMWPFFRD
RRIDAYEGLTKRYLD"
misc_feature complement(306747..307607)
/locus_tag="Halhy_0245"
/note="N-carbamoylputrescine amidohydrolase (CPA) (class
11 nitrilases); Region: CPA; cd07573"
/db_xref="CDD:143597"
misc_feature complement(306753..307604)
/locus_tag="Halhy_0245"
/note="N-carbamoylputrescine amidase; Region:
agmatine_aguB; TIGR03381"
/db_xref="CDD:188311"
misc_feature complement(order(307083..307085,307146..307151,
307155..307160,307236..307238,307257..307259,
307269..307271,307488..307490))
/locus_tag="Halhy_0245"
/note="putative active site; other site"
/db_xref="CDD:143597"
misc_feature complement(order(307158..307160,307269..307271,
307488..307490))
/locus_tag="Halhy_0245"
/note="catalytic triad [active]"
/db_xref="CDD:143597"
misc_feature complement(order(306771..306785,306909..306914,
306996..307001,307005..307013,307017..307022,
307125..307130,307137..307151,307155..307157,
307212..307220,307239..307241,307257..307268))
/locus_tag="Halhy_0245"
/note="putative dimer interface [polypeptide binding];
other site"
/db_xref="CDD:143597"
gene complement(307724..308737)
/locus_tag="Halhy_0246"
/db_xref="GeneID:10584399"
CDS complement(307724..308737)
/locus_tag="Halhy_0246"
/note="COGs: COG2957 Peptidylarginine deiminase;
InterPro IPR007466;
KEGG: ppn:Palpr_2820 agmatine deiminase;
PFAM: Peptidyl-arginine deiminase, Porphyromonas-type;
PRIAM: Agmatine deiminase;
SPTR: uncharacterized protein;
IMG reference gene:2504769598;
PFAM: Porphyromonas-type peptidyl-arginine deiminase"
/codon_start=1
/transl_table=11
/product="Agmatine deiminase"
/protein_id="YP_004445031.1"
/db_xref="GI:332662243"
/db_xref="InterPro:IPR007466"
/db_xref="GeneID:10584399"
/translation="MNHRLPAEWEPQSAVQFTFPHAETDWVDILDEVLPCFVAAIDII
SQHEKVLVVCKNKAEVGALLNKAVQENLILVECPSNDTWARDHGGITILENGQPVILD
FVFNGWGLKFPAYLDNLITGRLHAQGVFKAPLRHGGLALEGGALESDGVGTLLTTAEC
LLSPNRNPHLSKAEVEAKLKDLFGLVRVLWLHHGYLAGDDTDSHIDTLARFCSPETIA
YVQCNDPKDEHYTALQAMEKELQSFTTLSGNPYHLIPLPMAEACYAEDGQRLPATYAN
FLIVNGAVLVPTYDVPQDALALAQLEKAFPQHQIIGLNCRALIEQHGSLHCITVQYPV
GVI"
misc_feature complement(307739..308728)
/locus_tag="Halhy_0246"
/note="Porphyromonas-type peptidyl-arginine deiminase;
Region: PAD_porph; pfam04371"
/db_xref="CDD:202987"
misc_feature complement(307739..308728)
/locus_tag="Halhy_0246"
/note="agmatine deiminase; Region: agmatine_aguA;
TIGR03380"
/db_xref="CDD:132423"
gene 308878..309576
/locus_tag="Halhy_0247"
/db_xref="GeneID:10584400"
CDS 308878..309576
/locus_tag="Halhy_0247"
/note="KEGG: vvu:VV1_2886 hypothetical protein;
SPTR: uncharacterized protein;
IMG reference gene:2504769599;
PFAM: Protein of unknown function (DUF2927)"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004445032.1"
/db_xref="GI:332662244"
/db_xref="InterPro:IPR021323"
/db_xref="GeneID:10584400"
/translation="MLKKTFRYSALLLILLVSACNSVKDDPTPIGNELTEAQQYFLSI
AFGTEFGGASPVIRKWATEVKIFMADSSHQELNQELNLVINELNDLIETISIRRVNTR
AESNLVLYCGNADTFVRDYEPATQNVIKNNFGLFWVYWNNQQELIRGNVFVDTQRTQG
VSCLRHLLREELTQSLGIMQDSGQFTDSIFQQRWTCTTTYAAVDTMVIKLLYHPLVKP
GMSKQQVTAIIKKL"
misc_feature 308980..309573
/locus_tag="Halhy_0247"
/note="Protein of unknown function (DUF2927); Region:
DUF2927; pfam11150"
/db_xref="CDD:151593"
gene 309645..311783
/locus_tag="Halhy_0248"
/db_xref="GeneID:10584401"
CDS 309645..311783
/locus_tag="Halhy_0248"
/note="COGs: COG0366 Glycosidase;
InterPro IPR006589:IPR006047:IPR002044;
KEGG: hau:Haur_1153 alpha amylase catalytic subunit;
PFAM: Glycosyl hydrolase, family 13, catalytic region;
Glycoside hydrolase, carbohydrate-binding;
PRIAM: Amylosucrase;
SMART: Glycosyl hydrolase, family 13, subfamily, catalytic
region;
SPTR: Alpha amylase catalytic region;
IMG reference gene:2504769600;
PFAM: Starch binding domain; Alpha amylase, catalytic
domain"
/codon_start=1
/transl_table=11
/product="amylosucrase"
/protein_id="YP_004445033.1"
/db_xref="GI:332662245"
/db_xref="InterPro:IPR002044"
/db_xref="InterPro:IPR006047"
/db_xref="InterPro:IPR013780"
/db_xref="InterPro:IPR013781"
/db_xref="InterPro:IPR013783"
/db_xref="InterPro:IPR013784"
/db_xref="InterPro:IPR017853"
/db_xref="GeneID:10584401"
/translation="MKQAKTIERRSRLFMDDFLHSYRVLYPDAGPERIQRLMDILSQV
DQKRSPSLKNLDADREWKADWFQQPDQVGMMLYVDLFASNLQGVIEHIDYFQELGITY
LHLMPLLKPRNGPNDGGYAVADYRAVNERLGTMEQLRDLAALLHEKGMLLVIDYVMNH
TAREHQWAQAALSGDKHFQDFYLLFDDRALPDAYERTLPEVFPDFAPGNFTWQPEIQK
WAWTTFYDFQWDLNYRNPDVFEAMLEEMLFLANVGVDILRLDAVPFLWKNLGTNCQNQ
QEAIHILAAYRALVRMVAPGLLFKSEAIVAPEDIIRYLGSGGLEGKVCEIGYNATLMN
HLWQALAAENTHLLRTTLSRLPAIPKEATWINYIRCHDDIGWGISDENAAAVGQSGRG
TRNYCSDFYSGVLPHSYAEGYIFQRDRQTGEARTSGTAAALTGLQKALVEADPQKIDL
AIKRLEVLNGVIFFMRGIPLIFSGDEIGQLNDYAYLLDPLKAGDNRWVHRPPMNWAKA
ARIHEAGTPEARIFSLHQRYIAVRRQSPALHSRSVDRIILPDSDALFVCERNYQGHKM
LLVANLSRTPQRMSISLLPPEWQNGVYVDALRQQSMSFINDHLSIGPYGVYWLKPALS
LESTSTTSVELSMYVPAEFGEELYVVGSLPILGNWDWQKGLSADSKDYPHWKLRFEVV
KGQAFSWKWVRVRNGKVVMWAEEDMEEMPL"
misc_feature 309651..311258
/locus_tag="Halhy_0248"
/note="Alpha amylase catalytic domain found in
Amylosucrase; Region: AmyAc_Amylosucrase; cd11324"
/db_xref="CDD:200463"
misc_feature 309894..311504
/locus_tag="Halhy_0248"
/note="trehalose synthase; Region: treS_nterm; TIGR02456"
/db_xref="CDD:162863"
misc_feature order(309993..309995,310002..310004,310122..310124,
310245..310250,310314..310316,310326..310328,
310416..310418,310422..310427,310548..310550,
310554..310556,310755..310763,310887..310889,
310917..310919,311130..311132)
/locus_tag="Halhy_0248"
/note="active site"
/db_xref="CDD:200463"
misc_feature order(310422..310424,310548..310550,310758..310760)
/locus_tag="Halhy_0248"
/note="catalytic site [active]"
/db_xref="CDD:200463"
misc_feature order(311565..311582,311643..311645,311661..311663,
311667..311669)
/locus_tag="Halhy_0248"
/note="starch-binding site 2 [chemical binding]; other
site"
/db_xref="CDD:119437"
misc_feature 311571..>311750
/locus_tag="Halhy_0248"
/note="The family 20 carbohydrate-binding module (CBM20),
also known as the starch-binding domain, is found in a
large number of starch degrading enzymes including
alpha-amylase, beta-amylase, glucoamylase, and CGTase
(cyclodextrin glucanotransferase). CBM20 is...; Region:
CBM20; cl15347"
/db_xref="CDD:211509"
misc_feature order(311619..311621,311712..311714,311748..311750,
311754..311756)
/locus_tag="Halhy_0248"
/note="starch-binding site 1 [chemical binding]; other
site"
/db_xref="CDD:119437"
gene complement(312081..313571)
/locus_tag="Halhy_0249"
/db_xref="GeneID:10584402"
CDS complement(312081..313571)
/locus_tag="Halhy_0249"
/note="COGs: COG1262 conserved hypothetical protein;
InterPro IPR005532;
KEGG: pph:Ppha_2378 protein of unknown function DUF323;
PFAM: Sulphatase-modifying factor;
SPTR: uncharacterized protein;
IMG reference gene:2504769601;
PFAM: Formylglycine-generating sulfatase enzyme"
/codon_start=1
/transl_table=11
/product="sulfatase-modifying factor protein"
/protein_id="YP_004445034.1"
/db_xref="GI:332662246"
/db_xref="InterPro:IPR005532"
/db_xref="InterPro:IPR009003"
/db_xref="InterPro:IPR016187"
/db_xref="GeneID:10584402"
/translation="MSNYFLKINTGQPAHIRVFRCISLWAMLCWAFQLSAQDPLVRVT
EDLKQNVVAVTVKFDDNSEEKGFGFITGEKDGQLYVVTAGHVVHGKLPKKPVKIQVKF
ISSLRQFSAEEESWFEADDLSLLTLPKPIGVQWQRKFAHFYPQAYQSVRFIGKNGDWV
SPGAGEIFRINNTRIEFTMYSMEPGTSGAPLLTESGIIGLVLEDERTSSFALSLSRIR
ELIGNAHFPYFMAELYESELTSVEGMVFIKGGTFTMGCTLEQGIDCEDDEKPAHRVTL
NDFYMGKHEVTVQAFKEFVEASGYRTDAEKDGWSYIWNNGYVKTDGINWRHDASGKLH
PPTGHDHPVIHVSWNDAVAYCQWLATKTGKKFRLPTEAEWEYAARGGHLSRGYKHAGS
NNLAEVAWFYAPPESDLNTHQVGRLQPNELGLYDLNGNVFEYCEDWYGNYSSTASSNP
KGATSGTHRVIRGGSWLHETEKCRTTSRFNAGVSDRYFHFGFRVVY"
misc_feature complement(312972..313376)
/locus_tag="Halhy_0249"
/note="Trypsin-like peptidase domain; Region: Trypsin_2;
pfam13365"
/db_xref="CDD:205544"
misc_feature complement(312087..312863)
/locus_tag="Halhy_0249"
/note="Uncharacterized conserved protein [Function
unknown]; Region: COG1262"
/db_xref="CDD:31454"
misc_feature complement(312087..312854)
/locus_tag="Halhy_0249"
/note="Formylglycine-generating sulfatase enzyme; Region:
FGE-sulfatase; pfam03781"
/db_xref="CDD:190747"
gene complement(314133..315584)
/locus_tag="Halhy_0250"
/db_xref="GeneID:10584403"
CDS complement(314133..315584)
/locus_tag="Halhy_0250"
/note="COGs: COG1262 conserved hypothetical protein;
InterPro IPR005532;
KEGG: cts:Ctha_2336 hypothetical protein;
PFAM: Sulphatase-modifying factor;
SPTR: uncharacterized protein;
IMG reference gene:2504769602;
PFAM: Formylglycine-generating sulfatase enzyme"
/codon_start=1
/transl_table=11
/product="sulfatase-modifying factor protein"
/protein_id="YP_004445035.1"
/db_xref="GI:332662247"
/db_xref="InterPro:IPR005532"
/db_xref="InterPro:IPR009003"
/db_xref="InterPro:IPR016187"
/db_xref="GeneID:10584403"
/translation="MKSSTLNFTPFFYPQPHFWCYSLAMLLLFWSTLMNAQDPIAQMA
ESLKPNVVAIKTTFEDGSEEKGFGFITGEEQGKLYLATAAHVVRGIELNQKAKSIQVK
FFRDIRWLEATFLYHWDREDLALLEMNKPTFVQWRSDCADFSPENLQKVRFVGLNGNE
PAWVYPGSGEIFDVSGNAIQFAIGTIRPGTSGAPLINEKGIVGLITQDEGGISTALKL
TQIRALFSGRGQYPYFGLQPLGSIVAPNTIKTNESVNVPQVDEYGLVLVKGGIFTMGC
TSEQGSDCYDIEKPAHQVKVKDFFIGKYEVTQAQWRKVMGSDPPNLYFKGCDQCPVER
VSWEEIQEFLRKLNAQTGKKYRLPTEAEWEYAARGGNQSKGYKYAGSNTLSEVAWFTE
NSDGKTHPVGTKQANELGLYDLSGNVYECCQDWYGDYSSNTQTNPTGAGSGSNRVGRG
GSWLGSARSCRMSYRFNDAPTNRYNSLGFRLAL"
misc_feature complement(<314874..315467)
/locus_tag="Halhy_0250"
/note="Trypsin-like serine proteases, typically
periplasmic, contain C-terminal PDZ domain
[Posttranslational modification, protein turnover,
chaperones]; Region: DegQ; COG0265"
/db_xref="CDD:30614"
misc_feature complement(314973..315389)
/locus_tag="Halhy_0250"
/note="Trypsin-like peptidase domain; Region: Trypsin_2;
pfam13365"
/db_xref="CDD:205544"
misc_feature complement(314139..314798)
/locus_tag="Halhy_0250"
/note="Uncharacterized conserved protein [Function
unknown]; Region: COG1262"
/db_xref="CDD:31454"
misc_feature complement(314139..314798)
/locus_tag="Halhy_0250"
/note="Formylglycine-generating sulfatase enzyme; Region:
FGE-sulfatase; cl15394"
/db_xref="CDD:199530"
gene 315900..316613
/locus_tag="Halhy_0251"
/db_xref="GeneID:10584404"
CDS 315900..316613
/locus_tag="Halhy_0251"
/note="KEGG: pat:Patl_2440 hypothetical protein;
SPTR: uncharacterized protein;
IMG reference gene:2504769603"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004445036.1"
/db_xref="GI:332662248"
/db_xref="GeneID:10584404"
/translation="MRHLLPIFILLSCCLAAQAQCDARIAPSDNSTLRYQTRGNRCEG
FYSSKVSAASLELIACTLGDFRFKNDKAEVITLSLLSGGKQSVNIRAQGIPINLYYRM
DATLQAGKTLAWEVSPVLLKDARTARAYNIGLLAYQGEGTQQVVFPVAPQSKLLPKST
VKDSLVLQFMGTARLASFRYQLDNGPLKPLAGSFPDGRPIRIKLSAALPKGLHTLTIK
YRALNDADGETTRRYQLQL"
gene 316620..317804
/locus_tag="Halhy_0252"
/db_xref="GeneID:10584405"
CDS 316620..317804
/locus_tag="Halhy_0252"
/note="IMG reference gene:2504769604"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004445037.1"
/db_xref="GI:332662249"
/db_xref="GeneID:10584405"
/translation="MEKEALIALLAEDKIEALLDELDHLSRKNRALHQDWTSLSGRYH
QLRSRELRGTAQADDLEVERNQIREALYVLIDRVYAPATVSSTGFGTFLTRWRWPLLV
LGISLAAISIGMLPVRQAEFTATLKTSDLNFRLIEPWPTTFRFSANRLNLGPLQEVRG
SGWQYTLEQLGQPIDLALDSGKLDIGPLFIPDSELLSLRCRANELSFVFGEHTSGEIN
LFQGDLNISPQGEVHSFGTGTQAGDLLQWQAEPSAQLTFQAAQNTPFRLPRMAIKAIE
FIKKEGDEVNSALLGGKVEVVGHGPLMLEAGDFLELGDLTETDFDLRQIVDTLEINLR
GKTNQLMNGAQKMYSRKPSLLEYFYQDKKIYFFGTVLVSLISLLWTLKGALGLGKDGM
AK"
gene 317866..319164
/locus_tag="Halhy_0253"
/db_xref="GeneID:10584406"
CDS 317866..319164
/locus_tag="Halhy_0253"
/note="InterPro IPR007197;
KEGG: cpi:Cpin_3074 radical SAM domain protein;
PFAM: Radical SAM;
SPTR: Radical SAM domain protein;
IMG reference gene:2504769605;
PFAM: Radical SAM superfamily"
/codon_start=1
/transl_table=11
/product="radical SAM protein"
/protein_id="YP_004445038.1"
/db_xref="GI:332662250"
/db_xref="InterPro:IPR007197"
/db_xref="GeneID:10584406"
/translation="MILKHSPYVLYADAEGNVFEDKSLYAVGRSGWYCDPIPNEDWIE
LPKGGSLYNLPGRIPLGIDVKTGEMRLCDLGFAVAAFVPPAHTGLYLAAYENQPEAPI
LSLFCYTAVGWYRGKFMVPAIRVEQDIRQECAGFDHEIVVQGVKELRQAYPHNRLVEH
LAENCALTYTCPAARNYFMGRWECPVPVSPACNANCIGCISEQPEDETVVSNQDRLQF
KPTPQEIIEFTVPHLESAPYPLISFGQGCEGEPLLMWETIREAIIEIRKFTDKGSINI
NTNGSKPDAVEALCKVGLNSIRVSTNSLQRNVYMPYYRPNNYDFDALAECIKIVNSYG
GWTSINYFVFPGQTDSVEEYEALRAFIKDTGVKMIQWRNFNIDPDWYLGRINLPDTGD
VLGVKQLMELIKEEFPEIKYGYYNPPMERIKGNYEVDFAH"
misc_feature 318421..319074
/locus_tag="Halhy_0253"
/note="Radical SAM superfamily. Enzymes of this family
generate radicals by combining a 4Fe-4S cluster and
S-adenosylmethionine (SAM) in close proximity. They are
characterized by a conserved CxxxCxxC motif, which
coordinates the conserved iron-sulfur cluster; Region:
Radical_SAM; cd01335"
/db_xref="CDD:100105"
misc_feature 318421..318948
/locus_tag="Halhy_0253"
/note="Radical SAM superfamily; Region: Radical_SAM;
pfam04055"
/db_xref="CDD:202871"
misc_feature order(318439..318441,318445..318447,318451..318453,
318457..318465,318604..318606,318610..318615,
318694..318702,318763..318765,318889..318891,
318982..318987)
/locus_tag="Halhy_0253"
/note="FeS/SAM binding site; other site"
/db_xref="CDD:100105"
gene 319596..320636
/locus_tag="Halhy_0254"
/db_xref="GeneID:10584407"
CDS 319596..320636
/locus_tag="Halhy_0254"
/note="InterPro IPR000866;
KEGG: cpi:Cpin_2877 alkyl hydroperoxide reductase/thiol
specific antioxidant/Mal allergen;
PFAM: Alkyl hydroperoxide reductase/ Thiol specific
antioxidant/ Mal allergen;
SPTR: Alkyl hydroperoxide reductase/ Thiol specific
antioxidant/ Mal allergen;
IMG reference gene:2504769606;
PFAM: AhpC/TSA family"
/codon_start=1
/transl_table=11
/product="alkyl hydroperoxide reductase"
/protein_id="YP_004445039.1"
/db_xref="GI:332662251"
/db_xref="InterPro:IPR000866"
/db_xref="InterPro:IPR012335"
/db_xref="InterPro:IPR012336"
/db_xref="InterPro:IPR017936"
/db_xref="InterPro:IPR017937"
/db_xref="GeneID:10584407"
/translation="MKKCYALITALLLVGISINAQSQQFRLEGEIKDVDSLTEATIMT
FENSKFVNQQVKIINRKFVFEGTIEHPCLAIINTDKVRGGLGVWLTSDTIKVLFYVKE
HGPAFRLLQSLSVEGSKEAKDYLAWINSKNEWNQKEPDKIKRNMYIWKGIDDYVTTYP
ESFLSAFMLSLEVEASGSVQARSIYNKLSPLMKATETGERLLKKIENAETNAIGTKIS
GFSLPDVNGKLVTVDSTAKTWTILHFWDSWCGPCRVENRNLIGHQKLLKEKGVKLIGI
SLDETKDTWLKSIEKDKIAWLELNKLKPWNENEIIKQFKIYSIPYSILIDENMVIQSI
GMNNIIAKIQGL"
misc_feature 319641..319967
/locus_tag="Halhy_0254"
/note="Domain of unknown function (DUF4369); Region:
DUF4369; pfam14289"
/db_xref="CDD:206457"
misc_feature 320253..320630
/locus_tag="Halhy_0254"
/note="TlpA-like family; composed of TlpA, ResA, DsbE and
similar proteins. TlpA, ResA and DsbE are bacterial
protein disulfide reductases with important roles in
cytochrome maturation. They are membrane-anchored proteins
with a soluble TRX domain containing a...; Region:
TlpA_like_family; cd02966"
/db_xref="CDD:48515"
misc_feature order(320340..320342,320349..320351)
/locus_tag="Halhy_0254"
/note="catalytic residues [active]"
/db_xref="CDD:48515"
gene 320747..321091
/locus_tag="Halhy_0255"
/db_xref="GeneID:10584408"
CDS 320747..321091
/locus_tag="Halhy_0255"
/note="COGs: COG0633 Ferredoxin;
InterPro IPR001041;
KEGG: phe:Phep_3215 ferredoxin;
PFAM: Ferredoxin;
SPTR: Ferredoxin;
IMG reference gene:2504769607;
PFAM: 2Fe-2S iron-sulfur cluster binding domain"
/codon_start=1
/transl_table=11
/product="ferredoxin"
/protein_id="YP_004445040.1"
/db_xref="GI:332662252"
/db_xref="InterPro:IPR001041"
/db_xref="InterPro:IPR001055"
/db_xref="InterPro:IPR012675"
/db_xref="GeneID:10584408"
/translation="MATVKFTFEDKKITQPIVVEGVTEGTSILDVTEDYDIHLNHNCG
GVCACSTCHVYVHRGEDDLEEISDKEEDFIDRAHNPRLNSRLGCQCIILDGEAYIEIE
IPDQSRIIGHEH"
misc_feature 320810..321031
/locus_tag="Halhy_0255"
/note="2Fe-2S iron-sulfur cluster binding domain.
Iron-sulfur proteins play an important role in electron
transfer processes and in various enzymatic reactions. The
family includes plant and algal ferredoxins, which act as
electron carriers in photosynthesis...; Region: fer2;
cd00207"
/db_xref="CDD:29262"
misc_feature order(320861..320866,320873..320875,320885..320887,
320891..320902,321005..321010)
/locus_tag="Halhy_0255"
/note="catalytic loop [active]"
/db_xref="CDD:29262"
misc_feature order(320873..320875,320891..320893,320900..320902,
321008..321010)
/locus_tag="Halhy_0255"
/note="iron binding site [ion binding]; other site"
/db_xref="CDD:29262"
gene 321125..321373
/locus_tag="Halhy_0256"
/db_xref="GeneID:10584409"
CDS 321125..321373
/locus_tag="Halhy_0256"
/note="InterPro IPR007479;
KEGG: phe:Phep_3214 FeS assembly protein IscX;
PFAM: ISC system FeS cluster assembly, IscX;
SPTR: FeS assembly protein IscX;
TIGRFAM: ISC system FeS cluster assembly, IscX;
IMG reference gene:2504769608;
PFAM: Protein of unknown function (DUF528);
TIGRFAM: FeS assembly protein IscX"
/codon_start=1
/transl_table=11
/product="FeS assembly protein IscX"
/protein_id="YP_004445041.1"
/db_xref="GI:332662253"
/db_xref="InterPro:IPR007479"
/db_xref="GeneID:10584409"
/translation="MAFDQFDNLPITWTDHEDVAMKLYERFGDEFAEGKIYRIRFTDL
IEWVLEIPNFVGTREECSEGNLEQIQAKWVYEWRDNQN"
misc_feature 321155..321358
/locus_tag="Halhy_0256"
/note="Iron-sulphur cluster assembly; Region:
Fe-S_assembly; pfam04384"
/db_xref="CDD:146824"
gene 321423..321926
/locus_tag="Halhy_0257"
/db_xref="GeneID:10584410"
CDS 321423..321926
/locus_tag="Halhy_0257"
/note="COGs: COG1778 Low specificity phosphatase (HAD
superfamily);
InterPro IPR010023:IPR006549;
KEGG: gfo:GFO_1811 3-deoxy-D-manno-octulosonate
8-phosphate phosphatase;
SPTR: 3-deoxy-D-manno-octulosonate 8-phosphate
phosphatase, YrbI family;
TIGRFAM: Phosphatase KdsC; HAD-superfamily hydrolase,
subfamily IIIA;
IMG reference gene:2504769609;
PFAM: haloacid dehalogenase-like hydrolase;
TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate
phosphatase, YrbI family"
/codon_start=1
/transl_table=11
/product="3-deoxy-D-manno-octulosonate 8-phosphate
phosphatase"
/protein_id="YP_004445042.1"
/db_xref="GI:332662254"
/db_xref="InterPro:IPR010023"
/db_xref="InterPro:IPR013200"
/db_xref="GeneID:10584410"
/translation="MNHLEIFSTIHTFIFDVDGVMTNNEVVITESGELLRTMNVRDGL
AMRIAIDKGFRIAVITGGRSEGVKKRLEALGVKDIYSGISNKLEAFDEFVEKYELDPV
GILYMGDDLPDYPVLRRVGLATCPKNSAPELFPIVNYVSPYNGGEGCVRDVIEKVLRL
QGKWSEE"
misc_feature 321432..321920
/locus_tag="Halhy_0257"
/note="Low specificity phosphatase (HAD superfamily)
[General function prediction only]; Region: COG1778"
/db_xref="CDD:31964"
misc_feature 321459..321797
/locus_tag="Halhy_0257"
/note="Haloacid dehalogenase-like hydrolases. The haloacid
dehalogenase-like (HAD) superfamily includes L-2-haloacid
dehalogenase, epoxide hydrolase, phosphoserine
phosphatase, phosphomannomutase, phosphoglycolate
phosphatase, P-type ATPase, and many others; Region:
HAD_like; cd01427"
/db_xref="CDD:119389"
misc_feature order(321468..321476,321600..321605)
/locus_tag="Halhy_0257"
/note="active site"
/db_xref="CDD:119389"
misc_feature 321468..321485
/locus_tag="Halhy_0257"
/note="motif I; other site"
/db_xref="CDD:119389"
misc_feature 321600..321602
/locus_tag="Halhy_0257"
/note="motif II; other site"
/db_xref="CDD:119389"
gene 321977..322903
/locus_tag="Halhy_0258"
/db_xref="GeneID:10584411"
CDS 321977..322903
/locus_tag="Halhy_0258"
/note="COGs: COG0382 4-hydroxybenzoate
polyprenyltransferase and related prenyltransferase;
InterPro IPR000537;
KEGG: cpi:Cpin_1958 prenyltransferase;
PFAM: UbiA prenyltransferase;
SPTR: UbiA prenyltransferase;
IMG reference gene:2504769610;
PFAM: UbiA prenyltransferase"
/codon_start=1
/transl_table=11
/product="UbiA prenyltransferase"
/protein_id="YP_004445043.1"
/db_xref="GI:332662255"
/db_xref="InterPro:IPR000537"
/db_xref="GeneID:10584411"
/translation="MSFFRLIRLPNLLIVALVQSLLYFRLLLPAFQQNDIIPRLNTSE
FICLVLATVFTTAGGYILNDLYDAEMDMLNRKDKVVINVAISAQVGMWLYAIFGFAGL
MLSLYLAFRIGQIYMASLYLLSFGLLFFYTISLKKLPLAGNLLVAFFCLGVAALVWLA
EAPGWWELKTKAPQSALALQSIFNWYFSFAFFSTFFREIVKDMEDKEGDAAEACRTYP
IVAGEKAAKWLATAIAVLLIGLLIWQYLSQATGFSSGFYLGAFIGVVLPLAYSIQLLQ
KAQSASDYHRISLLAKMVMLAGILLLFFVNNT"
misc_feature 321977..322888
/locus_tag="Halhy_0258"
/note="UbiA prenyltransferase family; Region: UbiA;
cl00337"
/db_xref="CDD:206994"
gene 322903..323475
/locus_tag="Halhy_0259"
/db_xref="GeneID:10584412"
CDS 322903..323475
/locus_tag="Halhy_0259"
/note="COGs: COG0424 Nucleotide-binding protein implicated
in inhibition of septum formation;
HAMAP: Maf-like protein;
InterPro IPR003697;
KEGG: pmz:HMPREF0659_A6734 septum formation protein Maf;
PFAM: Maf-like protein;
SPTR: Maf protein;
TIGRFAM: Maf-like protein;
IMG reference gene:2504769611;
PFAM: Maf-like protein;
TIGRFAM: MAF protein"
/codon_start=1
/transl_table=11
/product="Septum formation protein Maf"
/protein_id="YP_004445044.1"
/db_xref="GI:332662256"
/db_xref="InterPro:IPR003697"
/db_xref="GeneID:10584412"
/translation="MNPLERKIILASTSPRRSQLLKEAGFQFEVKTQDVEETYPPEMP
VEEVAGFLARKKARAAHDFIQEDEIILAADSVVIINNVIYGKPLDYDDACQMIRTLSG
QMHRVITGVCLLSKDKERVFSAISDVLFEPLSDAEIDYYVQRYKPYDKAGSYAIQEWI
GLCKISRIEGTFTNIMGLPVDMVYRELMTF"
misc_feature 322918..323472
/locus_tag="Halhy_0259"
/note="Maf-like protein; Region: Maf; pfam02545"
/db_xref="CDD:202278"
misc_feature 322924..323463
/locus_tag="Halhy_0259"
/note="Nucleotide binding protein Maf. Maf has been
implicated in inhibition of septum formation in
eukaryotes, bacteria and archaea, but homologs in
B.subtilis and S.cerevisiae are nonessential for cell
division. Maf has been predicted to be a nucleotide-
or...; Region: Maf; cd00555"
/db_xref="CDD:29954"
misc_feature order(322936..322938,322951..322953,323011..323013,
323068..323070,323122..323124,323158..323160)
/locus_tag="Halhy_0259"
/note="active site"
/db_xref="CDD:29954"
misc_feature order(323050..323052,323254..323271)
/locus_tag="Halhy_0259"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:29954"
gene 323587..325485
/locus_tag="Halhy_0260"
/db_xref="GeneID:10584413"
CDS 323587..325485
/locus_tag="Halhy_0260"
/note="COGs: COG0514 Superfamily II DNA helicase;
InterPro IPR014001:IPR001650:IPR011545:IPR018329;
KEGG: phe:Phep_1902 ATP-dependent DNA helicase, RecQ
family;
PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal;
DNA/RNA helicase, C-terminal;
SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase,
C-terminal;
SPTR: ATP-dependent DNA helicase, RecQ family;
TIGRFAM: DNA helicase, ATP-dependent, RecQ type,
N-terminal;
IMG reference gene:2504769612;
PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box
helicase;
TIGRFAM: ATP-dependent DNA helicase, RecQ family"
/codon_start=1
/transl_table=11
/product="ATP-dependent DNA helicase RecQ"
/protein_id="YP_004445045.1"
/db_xref="GI:332662257"
/db_xref="InterPro:IPR001650"
/db_xref="InterPro:IPR004589"
/db_xref="InterPro:IPR011545"
/db_xref="InterPro:IPR014021"
/db_xref="GeneID:10584413"
/translation="MKPIDVLRQYWGHAQFRPQQEAIIQSVLDGRDTLALLPTGGGKS
VCFQVPALCQPGICIVISPLIALMKDQVQNLQKKGIPALAIYAGMAYRDIDRLLDNCV
HGEIKFLYLSPERLVSDLARARIKQMKVNLIAVDEAHCISQWGYDFRPPYLEIAKIRE
FFPQIPVMALTATATPEVVKDIQEKLEFKHQHLFQSSFSRPNLAYIVRPTEAKEDQLI
EILQKVPGSGVVYVRNRRRTKEVAQLLQKKRISADYYHAGLTPDERSAKQDAWVSGRT
RVMVSTNAFGMGIDKPDVRTVVHLELPDSLEAYFQEAGRAGRDGKKSFAVLLYNSNDR
RSLEYQYEQAFPSLDEARKVYRALGSFYQLALGGGQGESFDFEIATFAQNYGLEVIRV
FNCLKLLEQEGLISVSEAVFTPSTLLIKVDKERLYDYQLKHRELDKVLKIILRSYQGV
FSSYVSFSENKLAEYCKIPHELLQKNLLRMQQDEVIEYNPQKDKPQLSFIREREDANH
LHFDTKLYNFRKSRHAERIKKALAYAEENRCRSQQLLHYFGEKDAPACGVCDVCLERK
KQDLDNEGFERLRQKITRLLSEEALPVKELVDSFAPKMRQEVLDTLAFLQQEGVIEEK
NGKLFLKK"
misc_feature 323677..324105
/locus_tag="Halhy_0260"
/note="DEAD-like helicases superfamily. A diverse family
of proteins involved in ATP-dependent RNA or DNA
unwinding. This domain contains the ATP-binding region;
Region: DEXDc; cd00046"
/db_xref="CDD:28927"
misc_feature 323704..323718
/locus_tag="Halhy_0260"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28927"
misc_feature 323992..324003
/locus_tag="Halhy_0260"
/note="putative Mg++ binding site [ion binding]; other
site"
/db_xref="CDD:28927"
misc_feature 324199..324570
/locus_tag="Halhy_0260"
/note="Helicase superfamily c-terminal domain; associated
with DEXDc-, DEAD-, and DEAH-box proteins, yeast
initiation factor 4A, Ski2p, and Hepatitis C virus NS3
helicases; this domain is found in a wide variety of
helicases and helicase related proteins; may...; Region:
HELICc; cd00079"
/db_xref="CDD:28960"
misc_feature order(324283..324294,324352..324357,324430..324438)
/locus_tag="Halhy_0260"
/note="nucleotide binding region [chemical binding]; other
site"
/db_xref="CDD:28960"
misc_feature order(324454..324456,324517..324519,324529..324531,
324538..324540)
/locus_tag="Halhy_0260"
/note="ATP-binding site [chemical binding]; other site"
/db_xref="CDD:28960"
misc_feature 325291..325482
/locus_tag="Halhy_0260"
/note="HemN C-terminal domain; Region: HemN_C; pfam06969"
/db_xref="CDD:203555"
gene 325665..326780
/locus_tag="Halhy_0261"
/db_xref="GeneID:10584414"
CDS 325665..326780
/locus_tag="Halhy_0261"
/note="COGs: COG0438 Glycosyltransferase;
InterPro IPR001296;
KEGG: chu:CHU_2781 A-glycosyltransferase;
PFAM: Glycosyl transferase, group 1;
SPTR: A-glycosyltransferase-related protein,
glycosyltransferase 4 protein;
IMG reference gene:2504769613;
PFAM: Glycosyl transferases group 1"
/codon_start=1
/transl_table=11
/product="group 1 glycosyl transferase"
/protein_id="YP_004445046.1"
/db_xref="GI:332662258"
/db_xref="InterPro:IPR001296"
/db_xref="GeneID:10584414"
/translation="MRLVFTVTNDLRYDQRMMRICRSLSAAGHQVTLVGRLRRKSPSL
PETSYQQVRLRCWFDRGKLFYLDYNLRLFIWLLSHTFDIYTAIDLDTILPNLAVARLK
GKKIHYDAHEYFSEVPEVVDRPTIQRIWEAVARFAIPRVDAAYTVGPALAQIFQARYG
IPFQVIRNVPISTPAHQHTSTSAHQHISTSTHQHIILYQGVLNQGRGLEIAIAAMQKI
DGAELWLAGEGDLSTALRQLATDLHLEHKVKFLGYLAPEELRAVTKQATIGLNLLENR
GLSYYYSLANKAFDYVQAEVPSIQMKFPEYIALQEEHRVFYLLSQLEVDALVEAIQRL
LLDDELYLALQEGCRKAAKEWCWEKEATTLLGLYPLK"
misc_feature 325719..326768
/locus_tag="Halhy_0261"
/note="This family is most closely related to the GT1
family of glycosyltransferases and named after YqgM in
Bacillus licheniformis about which little is known.
Glycosyltransferases catalyze the transfer of sugar
moieties from activated donor molecules to...; Region:
GT1_YqgM_like; cd03801"
/db_xref="CDD:99974"
misc_feature 325731..326768
/locus_tag="Halhy_0261"
/note="Glycosyltransferase [Cell envelope biogenesis,
outer membrane]; Region: RfaG; COG0438"
/db_xref="CDD:30787"
gene 327380..328957
/locus_tag="Halhy_0262"
/db_xref="GeneID:10584415"
CDS 327380..328957
/locus_tag="Halhy_0262"
/note="COGs: COG1621 Beta-fructosidase
(levanase/invertase);
InterPro IPR001362:IPR013148:IPR013189;
KEGG: bld:BLi02827 SacC;
PFAM: Glycosyl hydrolases family 32, N-terminal; Glycosyl
hydrolase 32, C-terminal;
PRIAM: Fructan beta-fructosidase;
SMART: Glycoside hydrolase, family 32;
SPTR: Glycoside Hydrolase 32;
IMG reference gene:2504769614;
PFAM: Glycosyl hydrolases family 32 C terminal; Glycosyl
hydrolases family 32 N-terminal domain"
/codon_start=1
/transl_table=11
/product="fructan beta-fructosidase"
/protein_id="YP_004445047.1"
/db_xref="GI:332662259"
/db_xref="InterPro:IPR008985"
/db_xref="InterPro:IPR013148"
/db_xref="InterPro:IPR013189"
/db_xref="InterPro:IPR018053"
/db_xref="GeneID:10584415"
/translation="MKSIFTVILLSIILFSSCENNPPAAKDKTGSQYTEQHRPSFHFS
PESKWMNDPNGMVYYDGEYHLFYQYYPDSTVWGPMHWGHAVSKNLLTWEHLPIALFPD
ENGWIFSGSAVVDWNNTSGLGKNGKPPLVAIFTSHSSPGEKAGRNDFQTQSIAYSLDN
GRKWTKYPGNPVLKSPGIRDFRDPKVSWHEASQQWIMTLAVQDHISFYASPDLKTWSH
QSDFGKASGAHGGVWECPDLFQLQVPGSKETKWVLLVSINPGGPNGGSATQYFVGSFD
GKTFRSDNSPETTLWMDYGRDNYAGVTWSDIPKADGRRLLMGWMSNWQYATVVPTEKW
RSATTIPRELTLKNTSAGLRLISSPVVELEKLRGKSSKIDAQKVAGIVDLSAKLGFPA
AQMEAILELELPNDSSADLGIEVSNSKGERYRVGYNAATKQFYSDRTQAGKTAFSNVF
AEKIHVAPRLASGNIVRLHIYFDRASAELFGDDGATVMTDILFPNEDYTQVKVYAENG
TAQLKSGVFYVVKSIWE"
misc_feature 327503..328831
/locus_tag="Halhy_0262"
/note="Glycosyl hydrolases family 32; Region: Glyco_32;
smart00640"
/db_xref="CDD:197813"
misc_feature 327524..328465
/locus_tag="Halhy_0262"
/note="Glycosyl hydrolase family 32, beta-fructosidases;
Region: GH32_B_Fructosidase; cd08996"
/db_xref="CDD:185737"
misc_feature order(327530..327535,327581..327583,327701..327706,
327923..327928,328079..328081)
/locus_tag="Halhy_0262"
/note="substrate binding [chemical binding]; other site"
/db_xref="CDD:185737"
misc_feature order(327533..327535,327926..327928,328079..328081)
/locus_tag="Halhy_0262"
/note="active site"
/db_xref="CDD:185737"
misc_feature 328580..328831
/locus_tag="Halhy_0262"
/note="Glycosyl hydrolases family 32 C terminal; Region:
Glyco_hydro_32C; pfam08244"
/db_xref="CDD:203887"
gene 329277..329504
/locus_tag="Halhy_0263"
/db_xref="GeneID:10584416"
CDS 329277..329504
/locus_tag="Halhy_0263"
/note="IMG reference gene:2504769615"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004445048.1"
/db_xref="GI:332662260"
/db_xref="GeneID:10584416"
/translation="MKLRIINIFLLGCIFYSCSTKQSNETNQKNVSTKTGIVKISYTL
DSINRDLKEYSNDVFFLSFYRGMCKRQGVRL"
gene 329560..329805
/locus_tag="Halhy_0264"
/db_xref="GeneID:10584417"
CDS 329560..329805
/locus_tag="Halhy_0264"
/note="IMG reference gene:2504769616"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004445049.1"
/db_xref="GI:332662261"
/db_xref="GeneID:10584417"
/translation="MEKSYKIESDGSISITFNFKPEGSMLEQEEQIAAALSEAGRLAS
ELSLKSFDTGGESIIVNNEKLSSRGEEKKTTKPPGVE"
gene 329913..330821
/locus_tag="Halhy_0265"
/db_xref="GeneID:10584418"
CDS 329913..330821
/locus_tag="Halhy_0265"
/note="KEGG: llo:LLO_1362 hypothetical protein;
SPTR: uncharacterized protein;
IMG reference gene:2504769617"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004445050.1"
/db_xref="GI:332662262"
/db_xref="GeneID:10584418"
/translation="MVSWKYAQLAASRVCEDMAMHHHRSISRKLVQKIGSEVGLIAWD
KEMEWSYDLPELKEVVKCVAISRDGTTTPIIGQGYRETMCGTISLYNKTGDRLHTIYK
ACAPEKGKEGFDRVMNKEVEEIKALFPSAKYVGLADGAANNWTYLNGCTTEQVLDFYH
ATEHLSEVSVAMEPNEERRKKWLDEACHDLKHRPKAAVFLFRELQAKQKEYGEHPPQV
LLDNLTYLSNNLKRMDYCRFLKNGFPIGSGVTEAACKVLAKQRLSGSGMRWHLHKVQD
MLLIRELVCTRGRWEQFWAFYDQIRA"
gene 330822..331466
/locus_tag="Halhy_0266"
/db_xref="GeneID:10584419"
CDS 330822..331466
/locus_tag="Halhy_0266"
/note="IMG reference gene:2504769618"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004445051.1"
/db_xref="GI:332662263"
/db_xref="GeneID:10584419"
/translation="MYIKLEPHPRQVELAIKYYVSVEKLFKGYRNDSLLFVDTSNVYF
LYELQINGRWDFFWANVNFVYDDKDNLNSITILPQIKCDYEREKNEKIYPGISALWAI
EDCKKYYKSVCHSFLATYEERYGKFQQTQNDTRADNISVYARYLKKVGNKRMEIIFRR
YLIQFPHETIEPYILYNTVKGHESDVLELQKEQLKLEENNSKAQDSLISINPDI"
gene complement(331677..332708)
/locus_tag="Halhy_0267"
/db_xref="GeneID:10584420"
CDS complement(331677..332708)
/locus_tag="Halhy_0267"
/note="KEGG: cat:CA2559_04265 hypothetical protein;
SPTR: uncharacterized protein;
IMG reference gene:2504769619"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004445052.1"
/db_xref="GI:332662264"
/db_xref="GeneID:10584420"
/translation="MNNEILNELIAKKIIPSDDVFDFSGSPFYEEFKDILDFYQKNLL
INSTKYDIHPCVIYIKNQFGINARAAKIQDYFIISINMGAIKHLIDVFLMNKELINEE
SLKEYQELESFLDVPIHVLMHHGAIHFSFYHEMAHLIQKSDYLTLSIYEDADHDSQFF
ITRHLLEIDADEFSAINVVAHVVDHAEDTFGDNLNESIMQNLIVVLCSSLLLYFLSFQ
SYKNEPEIYTTKSTHPHPCIRIAWIVITIIDYVNQDLKGRGYDFTLDRKKIGEAMLTF
SELIGVKIFGDSTISYFRKLMEENAELISIYLHKISMLKHNDKSMAVSKWNYLAGEYL
KKKGAEDEE"
gene 332742..333092
/locus_tag="Halhy_0268"
/db_xref="GeneID:10584421"
CDS 332742..333092
/locus_tag="Halhy_0268"
/note="IMG reference gene:2504769620"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004445053.1"
/db_xref="GI:332662265"
/db_xref="GeneID:10584421"
/translation="MFGEHKSHTPHPFTTYPATNKPQSLCITFQIHSPVQLGQFLNPP
TVFYGDQYLTPDSWASVSINQEEVSFRRVSHFRGPLQHRYDYFRFWLHTPTIKAQQIL
TKRIKNKRRATKSQ"
gene complement(333146..333220)
/locus_tag="Halhy_R0004"
/db_xref="GeneID:10584422"
tRNA complement(333146..333220)
/locus_tag="Halhy_R0004"
/product="tRNA-Arg"
/note="IMG reference gene:2504769621"
/db_xref="GeneID:10584422"
gene complement(333407..334060)
/locus_tag="Halhy_0269"
/db_xref="GeneID:10584423"
CDS complement(333407..334060)
/locus_tag="Halhy_0269"
/note="KEGG: phe:Phep_4064 hypothetical protein;
SPTR: uncharacterized protein;
IMG reference gene:2504769622"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004445054.1"
/db_xref="GI:332662266"
/db_xref="GeneID:10584423"
/translation="MLFLFLLLNFLTPVQPAPVPAGMKLALLKYNGGGDWYANPTALP
NLARYCNQNLGTAFDPDYATVEVGSPELFNFPFLHMTGHGNVVFSDMEAQNLRQYLIA
GGFLHIDDNYGMDPFVRVAMKKVFPELEFTELPFGHEIYRQKFNFPGGLPKIHKHDDK
PPRGYGLMWQGRLICFYSFECDLGDGWEDQDVHNDTPEARTQALRMGANLVQYAFQQ"
misc_feature complement(333416..333988)
/locus_tag="Halhy_0269"
/note="Domain of unknown function (DUF4159); Region:
DUF4159; pfam13709"
/db_xref="CDD:205884"
gene complement(334153..335010)
/locus_tag="Halhy_0270"
/db_xref="GeneID:10584424"
CDS complement(334153..335010)
/locus_tag="Halhy_0270"
/note="COGs: COG1385 conserved hypothetical protein;
InterPro IPR006700;
KEGG: ppn:Palpr_1227 hypothetical protein;
PFAM: Ribosomal RNA small subunit methyltransferase E;
SPTR: uncharacterized protein;
TIGRFAM: Ribosomal RNA small subunit methyltransferase E;
IMG reference gene:2504769623;
PFAM: RNA methyltransferase;
TIGRFAM: RNA methyltransferase, RsmE family"
/codon_start=1
/transl_table=11
/product="ribosomal RNA small subunit methyltransferase E"
/protein_id="YP_004445055.1"
/db_xref="GI:332662267"
/db_xref="InterPro:IPR006700"
/db_xref="InterPro:IPR015947"
/db_xref="GeneID:10584424"
/translation="MILFSQLFNIAEELLVASRANVRKFNLEYSAALDSTGGIWTKSQ
NLSFNLLMNIFYASNIVGSLLELDEEETRHLQVLRYTPGRILSVVDGKGNWYEAELLE
LGKKLARAKINTQKQQTQRKPYHLHVAIAPTKNIERLEWFLEKATEIGVDEITPILCR
HSERTQVRQDRLEKITLSAMKQSLKTFLPRLNPLQPLKTFLPAQANFSGQKCIAWITD
PPAALLQQTYQRGQSVMIVIGPEGDFAPEEIELATQCNFAPVSLGQSRLRTETAGVVA
VHTIELMNG"
misc_feature complement(334156..334857)
/locus_tag="Halhy_0270"
/note="16S ribosomal RNA methyltransferase RsmE;
Provisional; Region: PRK11713"
/db_xref="CDD:183286"
misc_feature complement(334171..334818)
/locus_tag="Halhy_0270"
/note="RNA methyltransferase; Region: Methyltrans_RNA;
pfam04452"
/db_xref="CDD:203020"
gene 335020..336357
/locus_tag="Halhy_0271"
/db_xref="GeneID:10584425"
CDS 335020..336357
/locus_tag="Halhy_0271"
/note="COGs: COG0750 membrane-associated Zn-dependent
protease 1;
InterPro IPR001478:IPR008915;
KEGG: cpi:Cpin_2050 peptidase M50;
PFAM: Peptidase M50;
SPTR: Peptidase M50;
IMG reference gene:2504769624;
PFAM: Peptidase M50;
TIGRFAM: RIP metalloprotease RseP"
/codon_start=1
/transl_table=11
/product="peptidase M50"
/protein_id="YP_004445056.1"
/db_xref="GI:332662268"
/db_xref="InterPro:IPR001478"
/db_xref="InterPro:IPR008915"
/db_xref="GeneID:10584425"
/translation="MGYLIMAGQLFLSLSILIVLHEMGHFFPARWFKTRVEKFYLFFD
PWFSLFKIKKGETEYGIGWLPLGGYVKISGMIDESMDREQMAGPPQPWEFRSKPAWQR
LIIMLGGVTVNFILGFFLYGMVLWTWGEEFLPTQNVKYGIAVSKLGEDMGLRDGDQVL
AVNGRQLTEFGDNQVRREIVINNAKSLEIERDGQKMTLPIDPKFVQVLSSYASKDEGL
YGVRMPFVIGRIAPKTPAADADFKLKDRIIGVNGQPTAYYHEFSKMVVPLKNKAIKVT
VLRNQKDTVIVPVTTTAEGKIGVASYEPAYYFKIERKDYTLGQALPAGVVKGVAFLGD
QVKAFGQMFKGKIKASESLGGFASIATMFGDVWDWERFWRMTAVLSLILAFMNLLPIP
ALDGGHVMFLLYEIISGRKPSDKFMEYATIVGFIIVIGLVLFANGLDIFRIFK"
misc_feature 335053..336267
/locus_tag="Halhy_0271"
/note="RIP metalloprotease RseP; Region: TIGR00054"
/db_xref="CDD:161683"
misc_feature 335053..>335397
/locus_tag="Halhy_0271"
/note="RseP-like Site-2 proteases (S2P), zinc
metalloproteases (MEROPS family M50A), cleave
transmembrane domains of substrate proteins, regulating
intramembrane proteolysis (RIP) of diverse signal
transduction mechanisms. In Escherichia coli, the S2P
homolog...; Region: S2P-M50_PDZ_RseP-like; cd06163"
/db_xref="CDD:100084"
misc_feature order(335080..335085,335092..335094)
/locus_tag="Halhy_0271"
/note="active site"
/db_xref="CDD:100084"
misc_feature <335473..335625
/locus_tag="Halhy_0271"
/note="PDZ domain of bacterial and plant zinc
metalloprotases, presumably membrane-associated or
integral membrane proteases, which may be involved in
signalling and regulatory mechanisms. May be responsible
for substrate recognition and/or binding, as most PDZ...;
Region: PDZ_metalloprotease; cd00989"
/db_xref="CDD:29046"
misc_feature 335668..335883
/locus_tag="Halhy_0271"
/note="PDZ domain of bacterial and plant zinc
metalloprotases, presumably membrane-associated or
integral membrane proteases, which may be involved in
signalling and regulatory mechanisms. May be responsible
for substrate recognition and/or binding, as most PDZ...;
Region: PDZ_metalloprotease; cd00989"
/db_xref="CDD:29046"
misc_feature order(335668..335673,335677..335679,335800..335805,
335812..335817)
/locus_tag="Halhy_0271"
/note="protein binding site [polypeptide binding]; other
site"
/db_xref="CDD:29046"
misc_feature <335932..>336228
/locus_tag="Halhy_0271"
/note="Site-2 protease (S2P) class of zinc
metalloproteases (MEROPS family M50) cleaves transmembrane
domains of substrate proteins, regulating intramembrane
proteolysis (RIP) of diverse signal transduction
mechanisms. Members of this family use proteolytic...;
Region: S2P-M50; cl10020"
/db_xref="CDD:209123"
misc_feature <336133..336345
/locus_tag="Halhy_0271"
/note="Site-2 protease (S2P) class of zinc
metalloproteases (MEROPS family M50) cleaves transmembrane
domains of substrate proteins, regulating intramembrane
proteolysis (RIP) of diverse signal transduction
mechanisms. Members of this family use proteolytic...;
Region: S2P-M50; cl10020"
/db_xref="CDD:209123"
misc_feature 336178..336189
/locus_tag="Halhy_0271"
/note="putative substrate binding region [chemical
binding]; other site"
/db_xref="CDD:100078"
misc_feature 336178..336189
/locus_tag="Halhy_0271"
/note="putative substrate binding region [chemical
binding]; other site"
/db_xref="CDD:100078"
gene 336505..337029
/locus_tag="Halhy_0272"
/db_xref="GeneID:10584426"
CDS 336505..337029
/locus_tag="Halhy_0272"
/note="InterPro IPR001623:IPR009073:IPR004640;
KEGG: phe:Phep_3175 co-chaperone Hsc20;
PFAM: Heat shock protein DnaJ, N-terminal; Heat shock
cognate protein B, C-terminal oligomerisation;
SPTR: Co-chaperone Hsc20;
TIGRFAM: Co-chaperone Hsc20;
IMG reference gene:2504769625;
PFAM: DnaJ domain; HSCB C-terminal oligomerisation domain;
TIGRFAM: Fe-S protein assembly co-chaperone HscB"
/codon_start=1
/transl_table=11
/product="co-chaperone Hsc20"
/protein_id="YP_004445057.1"
/db_xref="GI:332662269"
/db_xref="InterPro:IPR001623"
/db_xref="InterPro:IPR009073"
/db_xref="GeneID:10584426"
/translation="MKFFDFFELPISFTLDEADLRKRFLSNSKRYHPDFYTLESDAKQ
AEILQLSSLNNEAYRTLSDFDQRMKYILEEKGLLVEGQNEIPQIFLMEMMDINEQLME
LEFDFDEPIFTAVKQAVETKEHELEAEINPILQGYIEETASPEELNLIKIFYLKKRYL
LRIKENLSTFAHRR"
misc_feature 336517..336693
/locus_tag="Halhy_0272"
/note="DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock
protein 40) proteins are highly conserved and play crucial
roles in protein translation, folding, unfolding,
translocation, and degradation. They act primarily by
stimulating the ATPase activity of Hsp70s; Region: DnaJ;
cd06257"
/db_xref="CDD:99751"
misc_feature 336541..336975
/locus_tag="Halhy_0272"
/note="Fe-S protein assembly co-chaperone HscB; Region:
hscB; TIGR00714"
/db_xref="CDD:211601"
misc_feature order(336598..336606,336631..336633,336667..336672)
/locus_tag="Halhy_0272"
/note="HSP70 interaction site [polypeptide binding]; other
site"
/db_xref="CDD:99751"
misc_feature 336769..>336897
/locus_tag="Halhy_0272"
/note="HSCB C-terminal oligomerisation domain; Region:
HSCB_C; pfam07743"
/db_xref="CDD:203753"
gene 337081..337164
/locus_tag="Halhy_R0005"
/db_xref="GeneID:10584427"
tRNA 337081..337164
/locus_tag="Halhy_R0005"
/product="tRNA-Leu"
/note="IMG reference gene:2504769626"
/db_xref="GeneID:10584427"
gene 337189..337273
/locus_tag="Halhy_R0006"
/db_xref="GeneID:10584428"
tRNA 337189..337273
/locus_tag="Halhy_R0006"
/product="tRNA-Leu"
/note="IMG reference gene:2504769627"
/db_xref="GeneID:10584428"
gene 337384..339369
/locus_tag="Halhy_0273"
/db_xref="GeneID:10584429"
CDS 337384..339369
/locus_tag="Halhy_0273"
/note="InterPro IPR019500;
PFAM: Peptidase S46;
SPTR: uncharacterized protein;
IMG reference gene:2504769628;
PFAM: Peptidase S46"
/codon_start=1
/transl_table=11
/product="peptidase S46"
/protein_id="YP_004445058.1"
/db_xref="GI:332662270"
/db_xref="InterPro:IPR019500"
/db_xref="GeneID:10584429"
/translation="MQNALSIFFSHRFHADYRTDFTQKNLCKICEKNLHEICVKEKSP
IQGIKNYVILLFFFTINFALHAQEGFWSIDQIPQVQEKLQAAGLVFPLEKLTTAKQDG
LANAVIRFAYGNAVFLNAQGLAFGILSPSVVPDSIWPLMETNQGVWLAQSGQEIPLKG
FPAEVYVNSKPLKDQRLEPGQAFFFTSYETQPDGSSYAIETHLAGAQSSQVVEQRYKR
YTALQLIGVIRLPLEDTQEQQIGVLLRIHASPEKAQNAETLAAATPYIPLGKHELNQP
NHVVLGHPRGSSIHRLGFELDCALEMAKCHQDLDRALGAYVTRQPFITEDGVFRYYED
QQLLAQALPKRAIQEAEFRHQLSQRPELKSRYGTLLDSCRLAFQDLKRYVPAQVYTKG
IVYSPCSFFEAVRLFTMWRGRMGTSAHRLPSPEESQYFPEVFNRLPATENELLLPGLL
QRYYQNLPAEHLAPYAVRQAVYANKDYARLSETLLIKSKFSQPELISDWLNEDFLSNI
DVLAVDPAVQLVDSMLQFFADKVVPAMGKARQKAYRKADELRLAMGEVVPNYPAYPDA
DHSLRLSYGTLLDGSTESTPYLLSNAHVLEDQLGSPVLNQEGKLIGIVKGLTTAALGN
AYFYDPESSRAQIWTIESIRKRIQAHPFGADLLREWQ"
misc_feature 337579..>337758
/locus_tag="Halhy_0273"
/note="Peptidase S46; Region: Peptidase_S46; pfam10459"
/db_xref="CDD:151032"
misc_feature <338404..339288
/locus_tag="Halhy_0273"
/note="Peptidase S46; Region: Peptidase_S46; pfam10459"
/db_xref="CDD:151032"
gene complement(339349..340623)
/locus_tag="Halhy_0274"
/db_xref="GeneID:10584430"
CDS complement(339349..340623)
/locus_tag="Halhy_0274"
/note="COGs: COG0204 1-acyl-sn-glycerol-3-phosphate
acyltransferase;
InterPro IPR002123;
KEGG: mtt:Ftrac_2184 phospholipid/glycerol
acyltransferase;
PFAM: Phospholipid/glycerol acyltransferase;
SMART: Phospholipid/glycerol acyltransferase;
SPTR: 1-acyl-sn-glycerol-3-phosphate acetyltransferase;
IMG reference gene:2504769629;
PFAM: Acyltransferase"
/codon_start=1
/transl_table=11
/product="phospholipid/glycerol acyltransferase"
/protein_id="YP_004445059.1"
/db_xref="GI:332662271"
/db_xref="InterPro:IPR002123"
/db_xref="GeneID:10584430"
/translation="MLYYLVRPIARLGTYIFFRKIYFANEDRIPHNKSVILAINHPTG
FMEPIIMAVLLSKPLHFLVRGDFFSKKIYGSLLRALHMIPIFRMRDTTGFSGVKSNFS
TFEACYAGLKAGKIIMIFPEGRTELEKRLRPLQRGLVRIAFGTLERYPDLEDLYVVPV
GVNFTDGEQARSEVMINFGEPLSTRTFYQTGTATEGDALLEALAAAMAKNIVIVKDAA
DDELAEILLTLDRNERREKIFPVIADDAACLWREKAIATRINELPVAEKEGLKTKASA
YQKALKAAGVTDRAVAKSQKNGVGGLLFLILGCLPAWIGRAFCFLPAQLAHYIKAKRV
RRLEYKLPVWAGVSWGMFLVYYLLWLLIAGLSGQWLILLVAVCLGGLGYFGLYYFEYY
THWSNAQRFQRLSSAQQAALKQHRNELLPFTQ"
misc_feature complement(340057..340623)
/locus_tag="Halhy_0274"
/note="1-acyl-sn-glycerol-3-phosphate acyltransferase
[Lipid metabolism]; Region: PlsC; COG0204"
/db_xref="CDD:30553"
misc_feature complement(340060..340608)
/locus_tag="Halhy_0274"
/note="Lysophospholipid Acyltransferases (LPLATs) of
Glycerophospholipid Biosynthesis: Unknown AAK14816-like;
Region: LPLAT_AAK14816-like; cd07992"
/db_xref="CDD:153254"
misc_feature complement(order(340249..340257,340426..340437,
340483..340485,340492..340494,340501..340503))
/locus_tag="Halhy_0274"
/note="putative acyl-acceptor binding pocket; other site"
/db_xref="CDD:153254"
gene 340676..341665
/locus_tag="Halhy_0275"
/db_xref="GeneID:10584431"
CDS 340676..341665
/locus_tag="Halhy_0275"
/note="COGs: COG0324 tRNA
delta(2)-isopentenylpyrophosphate transferase;
HAMAP: tRNA dimethylallyltransferase;
InterPro IPR002627:IPR018022;
KEGG: mtt:Ftrac_0829 tRNA
delta(2)-isopentenylpyrophosphate transferase;
PFAM: tRNA isopentenyltransferase;
PRIAM: tRNA isopentenyltransferase;
SPTR: tRNA dimethylallyltransferase;
TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate
transferase;
IMG reference gene:2504769630;
PFAM: IPP transferase;
TIGRFAM: tRNA dimethylallyltransferase"
/codon_start=1
/transl_table=11
/product="tRNA dimethylallyltransferase"
/protein_id="YP_004445060.1"
/db_xref="GI:332662272"
/db_xref="InterPro:IPR002627"
/db_xref="InterPro:IPR018022"
/db_xref="GeneID:10584431"
/translation="MRNLFELAGTYSRNSRNQKFVEAAVIFPEKKYLIVIGGPTASGK
TALAIRLAQYFHTEILSADSRQFYQEMTIGTAKASAEELDMVPHHFINSLSIREAYNV
GDFERDALALLAQLYQKHQVVILAGGSSLYIKALCEGLDVFPDVPTQIREEVEALYQS
AGLAALQKELTQVDPVYFAEVDQSNPHRLIRAISVFRASGLPFSSFRTQQAEPRFFTP
IYLWLEVPREILYERINQRVDQMLEHGLETEARSLFEQRHLNALQTVGYQELFDYFVG
NISREEAIELIKRNSRRYAKRQGTWMRRDGFWHLFAPEQWEDILKFVQSIVSF"
misc_feature 340757..341650
/locus_tag="Halhy_0275"
/note="tRNA delta(2)-isopentenylpyrophosphate transferase;
Reviewed; Region: miaA; PRK00091"
/db_xref="CDD:178856"
misc_feature 340772..341620
/locus_tag="Halhy_0275"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:213113"
gene 341687..342055
/locus_tag="Halhy_0276"
/db_xref="GeneID:10584432"
CDS 341687..342055
/locus_tag="Halhy_0276"
/note="COGs: COG0023 Translation initiation factor 1
(eIF-1/SUI1) and related protein;
InterPro IPR001950;
KEGG: bfr:BF4009 translation initiation factor SUI1;
PFAM: Translation initiation factor SUI1;
SPTR: uncharacterized protein;
IMG reference gene:2504769631;
PFAM: Translation initiation factor SUI1; Mitochondrial
large subunit ribosomal protein (Img2);
TIGRFAM: translation initation factor SUI1, , prokaryotic"
/codon_start=1
/transl_table=11
/product="translation initiation factor SUI1"
/protein_id="YP_004445061.1"
/db_xref="GI:332662273"
/db_xref="InterPro:IPR001950"
/db_xref="InterPro:IPR005872"
/db_xref="InterPro:IPR007740"
/db_xref="GeneID:10584432"
/translation="MAKKDKNKDNNNKGRSGVVYSTDPDFEYKYEEEEEVPEVAPNQQ
KLRVFIDRKQRGGKEVTLITGFAGPQSALEELGKFLKTKCGVGGSAKDGEIIVQGDHR
ERVVQLLLEKGFTGTKKAGG"
misc_feature 341732..342052
/locus_tag="Halhy_0276"
/note="translation initiation factor Sui1; Validated;
Region: PRK06824"
/db_xref="CDD:168689"
misc_feature 341816..342028
/locus_tag="Halhy_0276"
/note="Homologs of eIF1/SUI1 including Escherichia coli
YciH; Region: YciH_like; cd11567"
/db_xref="CDD:211319"
misc_feature order(341843..341845,341855..341860,341864..341866,
341918..341920,341927..341935,341939..341947,
341951..341953,341978..341980,341987..341989)
/locus_tag="Halhy_0276"
/note="putative rRNA binding site [nucleotide binding];
other site"
/db_xref="CDD:211319"
gene complement(342105..343169)
/locus_tag="Halhy_0277"
/db_xref="GeneID:10584433"
CDS complement(342105..343169)
/locus_tag="Halhy_0277"
/note="KEGG: cth:Cthe_1219 hypothetical protein;
SPTR: uncharacterized protein;
IMG reference gene:2504769632"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004445062.1"
/db_xref="GI:332662274"
/db_xref="GeneID:10584433"
/translation="MNNLRWNLFWIFAGIFVLLTKTFLPNGSTVVEQVYSRGLFIGVR
WVFDMLSWSPIPLMYCFWIIVLWGAWRKIRSWRKNGFSILQFALGTASFVGALLFFFF
LLWGFNYSRVPIEKQLGLELKPLNKAEIEAAFEKETTRLIDLRSHLTNARRRPLQRSD
FPEKLERTVREGLETWLAAHNFPTAGRVRGRLLYPRGVFLRFSTAGLYFPYTGEGHID
PGLHPLQWPYTLTHELGHGYGFGDEGTCNFLALMGCDESKNVAIRYSGRLNYWRSLAA
QYRRYNPEVFKTVRESLPPEIQMDLNVINEAMLRYPDFIPDLQPRIYNAYLKSQGIAE
GVLNYDRVVMLAEAFERDQQ"
misc_feature complement(342132..343070)
/locus_tag="Halhy_0277"
/note="Protein of unknown function (DUF3810); Region:
DUF3810; pfam12725"
/db_xref="CDD:205044"
gene 343346..343669
/locus_tag="Halhy_0278"
/db_xref="GeneID:10584434"
CDS 343346..343669
/locus_tag="Halhy_0278"
/note="COGs: COG3118 Thioredoxin domain-containing
protein;
InterPro IPR013766:IPR005746;
KEGG: rmr:Rmar_0180 thioredoxin;
PFAM: Thioredoxin domain;
SPTR: Thioredoxin;
TIGRFAM: Thioredoxin;
IMG reference gene:2504769633;
PFAM: Thioredoxin;
TIGRFAM: thioredoxin"
/codon_start=1
/transl_table=11
/product="thioredoxin"
/protein_id="YP_004445063.1"
/db_xref="GI:332662275"
/db_xref="InterPro:IPR005746"
/db_xref="InterPro:IPR012335"
/db_xref="InterPro:IPR012336"
/db_xref="InterPro:IPR013766"
/db_xref="InterPro:IPR017936"
/db_xref="InterPro:IPR017937"
/db_xref="GeneID:10584434"
/translation="MAFEFTDSNFTEKTAEGVVLVDFWATWCGPCRAIAPTIEELYSD
YKDKALVGKLDVDHNPEVAMKYGIRSIPTLLILKDGKVVHQHVGLATKQVLANKLDAL
VETTV"
misc_feature 343367..343645
/locus_tag="Halhy_0278"
/note="TRX family; composed of two groups: Group I, which
includes proteins that exclusively encode a TRX domain;
and Group II, which are composed of fusion proteins of TRX
and additional domains. Group I TRX is a small ancient
protein that alter the redox...; Region: TRX_family;
cd02947"
/db_xref="CDD:48496"
misc_feature order(343427..343429,343436..343438)
/locus_tag="Halhy_0278"
/note="catalytic residues [active]"
/db_xref="CDD:48496"
gene 343824..344750
/locus_tag="Halhy_0279"
/db_xref="GeneID:10584435"
CDS 343824..344750
/locus_tag="Halhy_0279"
/note="COGs: COG1721 conserved hypothetical protein (some
members contain a von Willebrand factor type A (vWA)
domain);
InterPro IPR002881;
KEGG: sli:Slin_4278 hypothetical protein;
PFAM: Protein of unknown function DUF58;
SPTR: uncharacterized protein;
IMG reference gene:2504769634;
PFAM: Protein of unknown function DUF58"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004445064.1"
/db_xref="GI:332662276"
/db_xref="InterPro:IPR002881"
/db_xref="GeneID:10584435"
/translation="MKLLDNYEVRDLGNLELLAQQVVEGFIIGLHKSPFHGFSVEFAE
HRLYNQGESTRNIDWKVYARTDKMFSKRFEEETNLRCQIVIDGSSSMYFPEDTGQKPY
VNKLNFAALGAAALMNLLQKQRDAFGLTLFDSQVNTHTRCKTSTTHYRLLLSQLDRLL
SNPERNKTTAAADALHQIADSIHKRSLVVIFSDMFEHHADMDTLFSALQHLKHNKHEV
ILFHVVDKSKEIQFEFENRPYLFIDMETGEKLRLQSNQIKKHYIEQMGKFMDELKMKC
LQYQIDFVEADIHQGFRNVLQTYLVKRSRMKA"
misc_feature 343938..>344111
/locus_tag="Halhy_0279"
/note="Protein of unknown function DUF58; Region: DUF58;
pfam01882"
/db_xref="CDD:202025"
gene 344856..345341
/locus_tag="Halhy_0280"
/db_xref="GeneID:10584436"
CDS 344856..345341
/locus_tag="Halhy_0280"
/note="IMG reference gene:2504769635"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004445065.1"
/db_xref="GI:332662277"
/db_xref="GeneID:10584436"
/translation="MTKMMLFVCLLIAGTILVLSACTRESENISPEPNTGTEYIAVDA
DFQNFRNWTVVTQLSQALSADGRAHTDAARTIWIKQADAKRGPNGQYPNGTILVKEVQ
GGYGIVAMVKRGGDYNSAHNGWEWFRLDSAGKITTRNSASICNNCHAQVKNLDYAFTK
N"
gene 345433..346170
/locus_tag="Halhy_0281"
/db_xref="GeneID:10584437"
CDS 345433..346170
/locus_tag="Halhy_0281"
/note="COGs: COG2326 conserved hypothetical protein;
InterPro IPR005660;
KEGG: cpi:Cpin_0387 protein of unknown function DUF344;
PFAM: Polyphosphate kinase 2;
SPTR: uncharacterized protein;
TIGRFAM: polyphosphate:nucleotide phosphotransferase, PPK2
family;
IMG reference gene:2504769636;
PFAM: Polyphosphate kinase 2 (PPK2);
TIGRFAM: polyphosphate:nucleotide phosphotransferase, PPK2
family"
/codon_start=1
/transl_table=11
/product="polyphosphate:nucleotide phosphotransferase"
/protein_id="YP_004445066.1"
/db_xref="GI:332662278"
/db_xref="InterPro:IPR016898"
/db_xref="InterPro:IPR022488"
/db_xref="GeneID:10584437"
/translation="MIKINDISADAPADLEKSAAKDLTKEYVDRLGELQSILTAQKKY
SVLVILQGMDGSGKDGATANVFKECHPNSLQVVSFKKPTEEEFAQDFLWRVHKNAPPK
GMIHIFNRSQYEDVIIQRVHKWIDEDRVKKRIASINAFEELLAYDNNTIIFKFMLHIS
KEQQEVELNQRLNEKEKFWKHNASDWREREHWDEYMRCYEDVLNQSSIPWTVVPVDQR
WYRDYVIAKAMVEKLETLDLAYPPLQK"
misc_feature 345436..346167
/locus_tag="Halhy_0281"
/note="Polyphosphate kinase 2 (PPK2); Region: PPK2;
cl11971"
/db_xref="CDD:200810"
gene 346174..346584
/locus_tag="Halhy_0282"
/db_xref="GeneID:10584438"
CDS 346174..346584
/locus_tag="Halhy_0282"
/note="COGs: COG1188 Ribosome-associated heat shock
protein implicated in the recycling of the 50S subunit (S4
paralog);
InterPro IPR002942;
KEGG: aai:AARI_26630 S4 domain-containing protein;
PFAM: RNA-binding S4;
SMART: RNA-binding S4;
SPTR: Heat shock protein Hsp15;
IMG reference gene:2504769637;
PFAM: S4 domain"
/codon_start=1
/transl_table=11
/product="RNA-binding S4 domain-containing protein"
/protein_id="YP_004445067.1"
/db_xref="GI:332662279"
/db_xref="InterPro:IPR002942"
/db_xref="GeneID:10584438"
/translation="MDKIRVDKWLWTVRMFKSRTMASDAVKGGRVKINGAAIKASYNI
GRGEVIELKKNGFNFQFKVIELLKNRVAAPIAITCYENLTPPEELNKYNEWFVGKGGI
EFRERGAGRPTKKDRREIDGFKDDWFDVEFDDES"
misc_feature 346183..>346338
/locus_tag="Halhy_0282"
/note="S4/Hsp/ tRNA synthetase RNA-binding domain; The
domain surface is populated by conserved, charged residues
that define a likely RNA-binding site; Found in stress
proteins, ribosomal proteins and tRNA synthetases; This
may imply a hitherto unrecognized...; Region: S4; cd00165"
/db_xref="CDD:29105"
misc_feature order(346186..346188,346222..346227,346231..346236,
346240..346245,346252..346257,346261..346263,
346282..346302,346306..346308)
/locus_tag="Halhy_0282"
/note="RNA binding surface [nucleotide binding]; other
site"
/db_xref="CDD:29105"
gene 346787..347176
/locus_tag="Halhy_0283"
/db_xref="GeneID:10584439"
CDS 346787..347176
/locus_tag="Halhy_0283"
/note="KEGG: aoe:Clos_1143 hypothetical protein;
SPTR: uncharacterized protein;
IMG reference gene:2504769638;
PFAM: Nuclear transport factor 2 (NTF2) domain"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004445068.1"
/db_xref="GI:332662280"
/db_xref="InterPro:IPR002075"
/db_xref="GeneID:10584439"
/translation="MLSKLEIVRKYWDLFDQADFKAVTKLMHDHAVVWEPNTREVFRS
RSAFLRMHEANPQPWRIEEIDMLSEMKEGIIVTVVKAYSEKTPESYFITSFFTFAGEK
IIEIMEYWSMNGEAPAWRNSQGFSEAY"
misc_feature 346808..347101
/locus_tag="Halhy_0283"
/note="SnoaL-like domain; Region: SnoaL_2; pfam12680"
/db_xref="CDD:205015"
gene 347240..347728
/locus_tag="Halhy_0284"
/db_xref="GeneID:10584440"
CDS 347240..347728
/locus_tag="Halhy_0284"
/note="IMG reference gene:2504769639"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004445069.1"
/db_xref="GI:332662281"
/db_xref="GeneID:10584440"
/translation="MKKIVIFLMVLPALYLFACKPQRQSNSTAQNTRDKNTSTQLLEL
EKARLSALSQLDSNQLKEMVSTDFQLTTSFGELINLQRVLQNYRVKYLAGAREKHYTK
STIVNIYNDGKTAILRGIYIVERIEKGGIIVLTTQYTDVYIKDAQKFLLASSHHSRIK
KN"
gene 347843..348532
/locus_tag="Halhy_0285"
/db_xref="GeneID:10584441"
CDS 347843..348532
/locus_tag="Halhy_0285"
/note="KEGG: bta:317693 AE binding protein 1;
SPTR: Predicted protein;
IMG reference gene:2504769640"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004445070.1"
/db_xref="GI:332662282"
/db_xref="GeneID:10584441"
/translation="MAKLDLSVVDIRSLIDTYTSDLRQLQFKSASIKANIEALEEMLG
KGTPAPAKEEKKESKAGRPPKKQKQILEAPVDVTEVKETKPEKATKTPKVEKTPKKGP
GRPRLIPLDQIKVEKPKKEKPVKATKAEKPAKVSKKVPAEGAAKRGRIPGFNRWEEGI
IEMLRSTNRPLKNEELMEAMTMIAKRDNVQEGPAQLKVRLNQALVKLGNKLGLLKKSP
SGGKGFLYSLK"
gene complement(348646..349689)
/locus_tag="Halhy_0286"
/db_xref="GeneID:10584442"
CDS complement(348646..349689)
/locus_tag="Halhy_0286"
/note="COGs: COG0709 Selenophosphate synthase;
HAMAP: Selenide, water dikinase;
InterPro IPR000728:IPR010918:IPR004536;
KEGG: sli:Slin_3011 selenide, water dikinase;
PFAM: AIR synthase related protein; AIR synthase related
protein, C-terminal;
SPTR: Selenide, water dikinase;
TIGRFAM: Selenide water dikinase;
IMG reference gene:2504769641;
PFAM: AIR synthase related protein, N-terminal domain; AIR
synthase related protein, C-terminal domain;
TIGRFAM: selenium donor protein"
/codon_start=1
/transl_table=11
/product="Selenide, water dikinase"
/protein_id="YP_004445071.1"
/db_xref="GI:332662283"
/db_xref="InterPro:IPR000728"
/db_xref="InterPro:IPR004536"
/db_xref="InterPro:IPR010918"
/db_xref="InterPro:IPR016188"
/db_xref="InterPro:IPR023061"
/db_xref="GeneID:10584442"
/translation="MHNNYKLTQYSHGAGCGCKISPSVLDNILVQASEKVHFNTLLVG
NDERDDAAVMDLGDGTAIISTTDFFMPIVDDAMDFGQIASVNAISDVYAMGGTPLLAI
AILGWPINTLPPEVANLVIEGSRKACLEAGIPLAGGHSIDSPEPIFGLAVTGRVKLEH
LKRNGGASVGSKLFLTKPLGVGILTTAQKKGLLREEHANLARNSMLKLNKAGAAFATL
PYVEAMTDVTGFGLMGHLIEMCEASGTSAVIELDKIPLLDAEAIDYYLYHRCVPGGTN
RNFDSYGHKLAPLTDVQRNILCDPQTSGGLLVAIEASQEKTFQSFASELGLALAPIGE
IVREGEKRVEVRN"
misc_feature complement(348652..349689)
/locus_tag="Halhy_0286"
/note="selenophosphate synthetase; Provisional; Region:
PRK00943"
/db_xref="CDD:179176"
misc_feature complement(348685..349671)
/locus_tag="Halhy_0286"
/note="Selenophosphate synthetase (SelD) catalyzes the
conversion of selenium to selenophosphate which is
required by a number of bacterial, archaeal and eukaryotic
organisms for synthesis of Secys-tRNA, the precursor of
selenocysteine in selenoenzymes. The...; Region: SelD;
cd02195"
/db_xref="CDD:100031"
misc_feature complement(order(348976..348978,349237..349239,
349249..349254,349273..349275,349372..349374,
349381..349383,349390..349392,349420..349422,
349486..349488,349492..349494,349498..349509))
/locus_tag="Halhy_0286"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:100031"
misc_feature complement(order(349273..349281,349420..349422,
349432..349434))
/locus_tag="Halhy_0286"
/note="putative ATP binding site [chemical binding]; other
site"
/db_xref="CDD:100031"
gene complement(349673..350707)
/locus_tag="Halhy_0287"
/db_xref="GeneID:10584443"
CDS complement(349673..350707)
/locus_tag="Halhy_0287"
/note="COGs: COG2603 ATPase;
InterPro IPR001763:IPR017582;
KEGG: sli:Slin_4991 tRNA 2-selenouridine synthase;
PFAM: Rhodanese-like;
SMART: Rhodanese-like;
SPTR: tRNA 2-selenouridine synthase;
TIGRFAM: tRNA 2-selenouridine synthase;
IMG reference gene:2504769642;
PFAM: Rhodanese-like domain;
TIGRFAM: tRNA 2-selenouridine synthase"
/codon_start=1
/transl_table=11
/product="tRNA 2-selenouridine synthase"
/protein_id="YP_004445072.1"
/db_xref="GI:332662284"
/db_xref="InterPro:IPR001307"
/db_xref="InterPro:IPR001763"
/db_xref="InterPro:IPR016130"
/db_xref="GeneID:10584443"
/translation="MDLKIAPESLSNALKDRVLLDVRTPAEFAIGHIPGAYNLPLFSD
EERVVVGTMYKQQSPDKAFLKGLEYAGARMPDYVKEARLLAPRGKVVVHCWRGGQRSG
SLSWLLGFSGMDVMTLQGGYKAYRQFIHQEFARYQLRMLVLGGPTGSAKTKTLHALAA
LGEQIIDLEQLAQHKGSAFGDLGEAPQPSVEQFENNLYAVFSLIDPQRRVWVENESRG
IGRVFMPQGFWDQFRQSPLLDLEIPFDQRVAFLVATYASFDKDALRTAFMNIERRLGG
LNLKNALAALQADDFATAAEIALRYYDKSYLHANQKCNFHPVWTFPGANESLHERAQQ
LIQFADAQQL"
misc_feature complement(349700..350668)
/locus_tag="Halhy_0287"
/note="tRNA 2-selenouridine synthase; Provisional; Region:
PRK11784"
/db_xref="CDD:183313"
misc_feature complement(350321..350662)
/locus_tag="Halhy_0287"
/note="Rhodanese Homology Domain (RHOD); an alpha beta
fold domain found duplicated in the rhodanese protein. The
cysteine containing enzymatically active version of the
domain is also found in the Cdc25 class of protein
phosphatases and a variety of proteins...; Region: RHOD;
cl00125"
/db_xref="CDD:212175"
misc_feature complement(350426..350428)
/locus_tag="Halhy_0287"
/note="active site residue [active]"
/db_xref="CDD:29073"
gene complement(350698..351612)
/locus_tag="Halhy_0288"
/db_xref="GeneID:10584444"
CDS complement(350698..351612)
/locus_tag="Halhy_0288"
/note="COGs: COG0408 Coproporphyrinogen III oxidase;
InterPro IPR001260;
KEGG: dfe:Dfer_2369 coproporphyrinogen III oxidase;
PFAM: Coproporphyrinogen III oxidase;
PRIAM: Coproporphyrinogen oxidase;
SPTR: Coproporphyrinogen oxidase;
IMG reference gene:2504769643;
PFAM: Coproporphyrinogen III oxidase"
/codon_start=1
/transl_table=11
/product="coproporphyrinogen oxidase"
/protein_id="YP_004445073.1"
/db_xref="GI:332662285"
/db_xref="InterPro:IPR001260"
/db_xref="InterPro:IPR018375"
/db_xref="GeneID:10584444"
/translation="MKTFSAPRVDRESITAYFQDLQDDICQQLETADGLGRFQEDTWE
REGGGGGRSRVIMGQHIEKGGVNFSAVHGELSPKIAQALQLQSSNFFATGVSIVLHSS
NPFAPIIHMNVRYFETDGGQWWFGGGIDLTPHYIFPEDAAFFHQALKTTCDQHHPDYY
PKYKVWADDYFYIKHRGETRGIGGIFFDRLNEQSGQSKEQLFAFVRAVGETFCPTYIP
LLHQHKNDPFTEREKNWQYLRRGRYVEFNLVWDKGTKFGLDTDGRTESILMSLPPTAN
WVYNHQPEEGSSEAQTLAWLKEKGKEWI"
misc_feature complement(350701..351585)
/locus_tag="Halhy_0288"
/note="coproporphyrinogen III oxidase; Provisional;
Region: PRK05330"
/db_xref="CDD:180020"
gene 351864..352751
/locus_tag="Halhy_0289"
/db_xref="GeneID:10584445"
CDS 351864..352751
/locus_tag="Halhy_0289"
/note="COGs: COG2820 Uridine phosphorylase;
InterPro IPR000845;
KEGG: cpi:Cpin_4693 purine or other phosphorylase 1;
PFAM: Nucleoside phosphorylase;
SPTR: Purine nucleoside phosphorylase II;
IMG reference gene:2504769644;
PFAM: Phosphorylase superfamily"
/codon_start=1
/transl_table=11
/product="purine or other phosphorylase 1"
/protein_id="YP_004445074.1"
/db_xref="GI:332662286"
/db_xref="InterPro:IPR000845"
/db_xref="InterPro:IPR018017"
/db_xref="GeneID:10584445"
/translation="MQALADTELIITPAGKIYHLDLHPDELADTVITVGDPARVEAIS
KHFERIESRTSHREFVTHTGYVGKKRLTVLSTGIGPDNIDICLNELDALANIDFKTRI
PKPHPRQLNIIRLGTSGALQQDIKPGSLIVSRYGLGLDNLLHFYQYQPNLAEAELMDA
VLDMEKYVEKFPVRPYACEGSGALADLLSAGGIEQGITITCPGFYAPQARSLRTHARM
SIQTLDAWSKLSYKGVRLTNFEMETSAIFGLARLLGHRAVSCNVILGNRLNGDFTDDP
AGIVERMIELMLPRIAGLE"
misc_feature 351906..352718
/locus_tag="Halhy_0289"
/note="Uridine phosphorylase [Nucleotide transport and
metabolism]; Region: Udp; COG2820"
/db_xref="CDD:32648"
misc_feature 351948..352745
/locus_tag="Halhy_0289"
/note="Phosphorylase superfamily; Region: PNP_UDP_1;
pfam01048"
/db_xref="CDD:201572"
gene complement(352820..353869)
/locus_tag="Halhy_0290"
/db_xref="GeneID:10584446"
CDS complement(352820..353869)
/locus_tag="Halhy_0290"
/note="InterPro IPR008592:IPR010106;
KEGG: cts:Ctha_2218 hypothetical protein;
PFAM: Protein of unknown function DUF874, Helicobacter
pylori;
SPTR: uncharacterized protein;
TIGRFAM: Conserved hypothetical protein CHP01784;
IMG reference gene:2504769645;
PFAM: Helicobacter pylori protein of unknown function
(DUF874);
TIGRFAM: conserved hypothetical protein ( transposase or
invertase)"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004445075.1"
/db_xref="GI:332662287"
/db_xref="InterPro:IPR008592"
/db_xref="GeneID:10584446"
/translation="MAEPLFINPFTDFGFKKIFGEEQNKDLLIDFLNELLATQNQHIS
DLVFKKNDRLGIDDLDRKVVFDLYCENEQGEKFTVELQKAKQAFFKDRMLYYSSFSVQ
EQGLKGDWDYQLKAIYVIAILDFVMDEDNGNKIVVSKNKLMDVERYKVFYEKLTFVTL
QMPNFTKEEHQLESNFDKWLYVIKNLHKLDHIPERIQERVFQKLFKVASYTALSKEEK
AKYEDSLKYYNDLKNSLDTAQEEGYQEGYQEAQAVFGAKLEEEKQRTEQEKQRAEQEK
QRAEQEKQKAEQEKQKAEQERKLKENALIALENERNNFVQSVIKMHSIGMDTAQIAQI
TDRSIAEIEALLREE"
misc_feature complement(353159..353845)
/locus_tag="Halhy_0290"
/note="PD-(D/E)XK nuclease family transposase; Region:
PDDEXK_2; pfam12784"
/db_xref="CDD:193260"
gene 353872..354027
/locus_tag="Halhy_0291"
/db_xref="GeneID:10584447"
CDS 353872..354027
/locus_tag="Halhy_0291"
/note="IMG reference gene:2504769646"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004445076.1"
/db_xref="GI:332662288"
/db_xref="GeneID:10584447"
/translation="MLIFVDKVKAFRSHIQSFVGHFCKIQCNVDSEIRRKVNSRKRGK
KRRKLYT"
repeat_region 354414..354734
/note="CRISPR;
IMG reference mygene:Contig330_354414_RPT"
gene complement(355004..355348)
/locus_tag="Halhy_0292"
/db_xref="GeneID:10584448"
CDS complement(355004..355348)
/locus_tag="Halhy_0292"
/note="COGs: COG2827 endonuclease containing a URI domain;
InterPro IPR000305;
KEGG: lby:Lbys_0705 excinuclease ABC C subunit domain
protein;
PFAM: Excinuclease ABC, C subunit, N-terminal;
SMART: Excinuclease ABC, C subunit, N-terminal;
SPTR: Excinuclease ABC C subunit domain protein;
IMG reference gene:2504769647;
PFAM: GIY-YIG catalytic domain"
/codon_start=1
/transl_table=11
/product="excinuclease ABC subunit C"
/protein_id="YP_004445077.1"
/db_xref="GI:332662289"
/db_xref="InterPro:IPR000305"
/db_xref="GeneID:10584448"
/translation="MTGYMYILKCANDCYYTGSTTDLNRRLAQHQAGEGSNYTRKYLP
VELVYFEEYARIDEAFYREKQVQKWSHAKKEALINGQLEKLHLLAECKNGSHFGRRMV
GPGASASLDSAR"
misc_feature complement(355139..355339)
/locus_tag="Halhy_0292"
/note="The GIY-YIG domain of uncharacterized protein
family UPF0213 related to structure-specific endonuclease
SLX1; Region: GIY-YIG_UPF0213; cd10456"
/db_xref="CDD:198403"
misc_feature complement(order(355295..355303,355331..355339))
/locus_tag="Halhy_0292"
/note="GIY-YIG motif/motif A; other site"
/db_xref="CDD:198403"
misc_feature complement(order(355160..355162,355259..355261,
355271..355273,355295..355297,355301..355303,
355331..355333))
/locus_tag="Halhy_0292"
/note="putative active site [active]"
/db_xref="CDD:198403"
misc_feature complement(355160..355162)
/locus_tag="Halhy_0292"
/note="putative metal binding site [ion binding]; other
site"
/db_xref="CDD:198403"
gene complement(355729..356253)
/locus_tag="Halhy_0293"
/db_xref="GeneID:10584449"
CDS complement(355729..356253)
/locus_tag="Halhy_0293"
/note="IMG reference gene:2504769648"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004445078.1"
/db_xref="GI:332662290"
/db_xref="GeneID:10584449"
/translation="MSAKPKTYRSSTKTNYWAAILRAVPLAGIFYGILITIGNLLSYV
VFGGYTNFATKVITGIQLFLLWLIVSSTVRTLHLLAKDIPVLILWLAGGLTAIVSVLL
APIVLDLFYRMGLEVGPTIANASKLRFYLALGLIFSLIAIIHVRVKNKALGSTLEWVI
VLGLGVVFYVYYLK"
gene complement(356481..357137)
/locus_tag="Halhy_0294"
/db_xref="GeneID:10584450"
CDS complement(356481..357137)
/locus_tag="Halhy_0294"
/note="COGs: COG0176 Transaldolase;
HAMAP: transaldolase;
InterPro IPR001585:IPR004731;
KEGG: cat:CA2559_10763 transaldolase;
PFAM: Transaldolase;
SPTR: Probable transaldolase;
TIGRFAM: Transaldolase C;
IMG reference gene:2504769649;
PFAM: Transaldolase;
TIGRFAM: fructose-6-phosphate aldolase, TalC/MipB family"
/codon_start=1
/transl_table=11
/product="transaldolase"
/protein_id="YP_004445079.1"
/db_xref="GI:332662291"
/db_xref="InterPro:IPR001585"
/db_xref="InterPro:IPR013785"
/db_xref="InterPro:IPR018225"
/db_xref="InterPro:IPR022999"
/db_xref="GeneID:10584450"
/translation="MKFFIDTANLDQIKEAKDLGILDGVTTNPSLMAKEGISGTDNIL
NHYRAICEIVDGDVSAEVISTDFAGMVEEGMRLADLAPNIVVKVPMIKDGIKAINYFT
EHSIPTNCTLVFSSGQAILAAKAGATYLSPFVGRVDDINWDGMALIREIAEIYAIQGF
DTQILAASIRNSKHIVDAAKAGADVVTCPLSAILGLLKHPLTDLGLEQFLADHAKANK
"
misc_feature complement(356493..357134)
/locus_tag="Halhy_0294"
/note="Transaldolase-like fructose-6-phosphate aldolases
(FSA) found in bacteria and archaea; Region:
Transaldolase_FSA; cd00956"
/db_xref="CDD:188643"
misc_feature complement(order(356637..356639,356739..356741,
356877..356879,357054..357059,357120..357122))
/locus_tag="Halhy_0294"
/note="active site"
/db_xref="CDD:188643"
misc_feature complement(order(356499..356504,356508..356513,
356523..356525,356532..356537,356541..356543,
356589..356591,356598..356603,356619..356621,
356625..356627,356664..356669,356718..356720,
356724..356726,356733..356735,356739..356741,
356784..356786,356841..356843,356850..356855,
356859..356861,356919..356921,356937..356939,
356955..356957,357009..357011,357030..357032,
357039..357041,357048..357053,357078..357080,
357087..357089))
/locus_tag="Halhy_0294"
/note="intersubunit interactions; other site"
/db_xref="CDD:188643"
misc_feature complement(356877..356879)
/locus_tag="Halhy_0294"
/note="catalytic residue [active]"
/db_xref="CDD:188643"
gene complement(357468..360905)
/locus_tag="Halhy_0295"
/db_xref="GeneID:10584451"
CDS complement(357468..360905)
/locus_tag="Halhy_0295"
/note="InterPro IPR011647;
KEGG: cki:Calkr_1515 kwg repeat protein;
PFAM: KWG Leptospira;
SPTR: uncharacterized protein;
IMG reference gene:2504769650"
/codon_start=1
/transl_table=11
/product="KWG repeat-containing protein"
/protein_id="YP_004445080.1"
/db_xref="GI:332662292"
/db_xref="GeneID:10584451"
/translation="MQYISCIPIIIRTELRFYNTFFVVYPGKTELPIMRIVFVLFLGL
WGVWLHAQTFFPVKISNRWGLINGEGKLVIQPRYEAIGDFKLYGYAVMQREGKVGMLD
RQGQEIVAPRYEDLRVLDSLMIAVMDQGQWMVVNLQGKIILPKGYDRLFVWEGGYLAY
RMNQKWGVMDRLGRSIVPAQYDEVELKQEKYIQTSNEGRLGLYLRSGKELLAPSTEQI
EILNDSLFFFRRNQLWGAIDHRGRQMAPNRFQSWRRLSDSYFIFQVGAQNLLFSSICK
GIVTDGKTYDDYYPLTTRYIITRKDKSLGLIDWCGRVIISPLYDEILLHSPSVFRVNL
KGQWALLKEGDQELTPFKYSYIAPPKGPVSIVKLGQDFGLINGEGKELTAVKYRKIQL
EGNQAKAYKKNSAPGQAESLDLLRFNDRGELVADQSLDRHFKVRIGSNNNNPARVLEK
DEAGYILEKYEWFYAAKDDRWGLRNISDGSIQIPPTFRRIKVEPELGLTLVGMPSSKD
YEFERTTYRFEYIYGLVDNNLGALVTEISAIHFFLDDFRKGSTWARAWLQSGRYGLVS
RRGQFHAQDFSFIGPFQDGLARMSQVGRLSGALKPGQDMGKLQDYLSALSSPVALADF
TQYDQIFRDNASLTCESCTWGYIDTAGQTRIKPQFTFARDVVNEVGIVQCEAKWGVVN
RYGKQVIPCQYDDIHFLENTENKIIRLYVQRPKYGLIDTLGQLAVNALYDQIGSFREN
RLAVMRDGLWGFVNNEGTEIIPCRFREVSDFHEGLAAVKLGRFWGFIDKLGNVSIDFQ
YRRAGNFCNDLAWVETEKGIGFINPKNKMDILPQFEQAFDFDRGVARVKMEGKWGMID
NKNRWILRPKYYDIRAFDQHGLAVAVQNQENNRLGLINLQGLAVGSPNFTEIFPFSEG
LAVVKDKVAFGYLDTLGKLVIPCVYSRAEPFSEGRAAVYKEGNCGYLTREGTVLAPFV
FKQCRSFADGRAVVFQGSLRKAGLLDIEGKLLIEPSINRLLDFSEGRGLVRDEQYRFY
YITEQAGMYNGYYQKAGSFNHGVAVVQINNKWGVINRRGMELVPPKYSRIESFENGYA
KVRIDGFSGLSNLQGDLIVGADFEYIRYAGQGVFRVEQGDKIGYFDSEGNWIWTLSN"
gene complement(361015..362022)
/locus_tag="Halhy_0296"
/db_xref="GeneID:10584452"
CDS complement(361015..362022)
/locus_tag="Halhy_0296"
/note="COGs: COG1466 DNA polymerase III delta subunit;
InterPro IPR010372:IPR005790;
KEGG: cpi:Cpin_6524 DNA polymerase III, delta subunit;
PFAM: DNA polymerase III, delta;
SPTR: DNA polymerase III, delta subunit;
TIGRFAM: DNA polymerase III, delta subunit;
IMG reference gene:2504769651;
PFAM: DNA polymerase III, delta subunit;
TIGRFAM: DNA polymerase III, delta subunit"
/codon_start=1
/transl_table=11
/product="DNA polymerase III subunit delta"
/protein_id="YP_004445081.1"
/db_xref="GI:332662293"
/db_xref="InterPro:IPR010372"
/db_xref="GeneID:10584452"
/translation="MTFPEILKSLKQKQYKPLYFLHGDEAYFIDVISDYIENEVLNEG
ERAFNQTIVYGKDVDHLAIVDTARRYPMMAQHQVLILKEAQDMKTLKDLQTYVEKPLD
STILVICHKNGKYNLNSKFGKAIQANGVVFESKRLYENQIPNWIQDYLRNKKLSIRPE
ASALVAEYLGTELSRVANELDKMAINLAPGTEITTKHIEEQIGISKDYNVFELQKALG
QRDVLKANRIANYFAANPKRNPITVIISSLYGFFSKVYLLNFFLQASEKEQLEALELR
SAFFLKDYREATRYFNRSRAERAIALLREYDLKSKGVNYNSTGKPEVDLLREMIYLLL
H"
misc_feature complement(361468..361968)
/locus_tag="Halhy_0296"
/note="DNA polymerase III, delta subunit; Region:
DNA_pol3_delta; pfam06144"
/db_xref="CDD:203395"
misc_feature complement(361081..361923)
/locus_tag="Halhy_0296"
/note="DNA polymerase III, delta subunit; Region: holA;
TIGR01128"
/db_xref="CDD:200075"
gene 362050..364884
/locus_tag="Halhy_0297"
/db_xref="GeneID:10584453"
CDS 362050..364884
/locus_tag="Halhy_0297"
/note="InterPro IPR011429:IPR011444;
KEGG: phe:Phep_2715 protein of unknown function DUF1549;
PFAM: Protein of unknown function DUF1549; Cytochrome C,
Planctomycete;
SPTR: uncharacterized protein;
IMG reference gene:2504769652;
PFAM: Protein of unknown function (DUF1549); Planctomycete
cytochrome C; Protein of unknown function (DUF1553);
Carbohydrate binding module (family 6)"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004445082.1"
/db_xref="GI:332662294"
/db_xref="InterPro:IPR005084"
/db_xref="InterPro:IPR008979"
/db_xref="InterPro:IPR009056"
/db_xref="InterPro:IPR011429"
/db_xref="InterPro:IPR011444"
/db_xref="InterPro:IPR022655"
/db_xref="GeneID:10584453"
/translation="MVIKDFSTHCLNSSHNHDRKMKLPMLQNSRYFLFSISLLLLLLL
LANWVGLNQEAVHFNSQVKPILNKKCISCHGGVKKNGGFSMMNREEMLRPNESGKPAI
VPGKPGESELMRRITSHDPEERMPYEASPLSTKEIGILRQWIKEGAIWGTHWAYVPVQ
PVKVPAINGFLGLFSAKGSSWANTPIDKFIYTTLKEQQLSPSPRADKATLLRRVSLDL
IGLPAPDSIARAYLQDQSPQAFEKLVDALLASPRFGERWASMWLDLARYADTKGYERD
PGRQIWRYRDWLIRALNADMPYDQFLTEQIAGDLLPNPSDEQYLATAFHRNTSTNDEG
GTDNEEFRVAAVLDRVNATFEGVLGTTFACTQCHGHPYEDIKHEEYYRVLAYFNNTRD
EDTYEDYPLLRHYPTADSVKLDSLCTWVAKVSTPQRSMEMYTFLKTLQPSIYSIAGDR
FVNCELYDTKTLIMRKDASARFKQVDISGKTKLICKVQTHVEGGRWEIHQDSTNGPLV
TAIDLPDTKRAWKIMELDVKAPQGKHDLYWVYKNPGIKEITQGGMGFDWFYFTDAFPA
EGHPEAKKYQADFWHLLNSRPPSTPIAIENPVHMRRTTQVFERGNWIVKGKEVQVGVP
KLLGNVPQNAPNNRLGFVQWLVDKKNPLTARTMVNRLWEQVFGMGLVETLEDLGSQGA
NPTHPELLDYLAWQFMHQQQWSIKTALKHMLCTNTYQQRAEASPELYEKDPYNRYYAR
GPRVRLSAEQVRDQALALSGLLSTKMYGPGVMPFQPEGIWASPYGNEKWVLSEGEDRY
RRAVYTYHKRTSPYPSMLTFDGTTRDVCTARRIRTNTPLQALVTLNDPVYIDAAQALA
ERMQQLAGQDVKKQIAKGYYLALKRKIAPNKQAVLEELHEKALKKYRSNPKLADELFG
TEKVKDPPGSAAMVVVANALLNLDEVITKN"
misc_feature 362257..362427
/locus_tag="Halhy_0297"
/note="Planctomycete cytochrome C; Region: PSCyt1;
pfam07635"
/db_xref="CDD:203704"
misc_feature 362599..363237
/locus_tag="Halhy_0297"
/note="Protein of unknown function (DUF1549); Region:
PSCyt2; pfam07583"
/db_xref="CDD:148930"
misc_feature <363439..363729
/locus_tag="Halhy_0297"
/note="Carbohydrate Binding Module 6 (CBM6); many are
appended to glycoside hydrolase (GH) family 11 and GH43
xylanase domains; Region: CBM6_xylanase-like; cd04084"
/db_xref="CDD:193489"
misc_feature 363955..364737
/locus_tag="Halhy_0297"
/note="Protein of unknown function (DUF1553); Region:
PSD1; pfam07587"
/db_xref="CDD:116206"
gene 364891..366390
/locus_tag="Halhy_0298"
/db_xref="GeneID:10584454"
CDS 364891..366390
/locus_tag="Halhy_0298"
/note="InterPro IPR010869:IPR006311;
KEGG: phe:Phep_2714 protein of unknown function DUF1501;
PFAM: Protein of unknown function DUF1501;
SPTR: Protein of hypothetical function DUF1501;
IMG reference gene:2504769653;
PFAM: Protein of unknown function (DUF1501)"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004445083.1"
/db_xref="GI:332662295"
/db_xref="InterPro:IPR006311"
/db_xref="InterPro:IPR010869"
/db_xref="InterPro:IPR017849"
/db_xref="InterPro:IPR017850"
/db_xref="GeneID:10584454"
/translation="MNPSKFNIYQEALLNSAAFSTRRLFLKHCGMGLGAAALGQLLGS
CAPTTGNANPGVLYDPNNPMMPRAPHFPGKAKSVIYLHMAGAPSQLEMFDFKPDLAKL
DGQLCPESLLAGKRFAFIRGVPKMLGPCANFKQRGQSGAWVSDYLPHFAELADEVSFL
KAVHTDQFNHAPAQLMMQTGSARLGRPSIGSWVTYGLGSENSNLPGFVVLTSGGQNPD
AGKTVWGSGFLPSVYQGVQCRSAGEPVLYLQDPHGIDRDLRKASIDAINEVNRKTYEE
FQDPEILSRIAQYEMAYRMQVSAPEVMNISDEPAYIQEMYGVKPGKESFANNALLARK
LVEKGVRFVQLYDWGWDTHGTGADGAVDIGLINKCREIDKSMSALILDLKQRGLLDET
LIVWGSEFGRTPMQENRNGLELPFKGRDHHADAFTMWMCGGGVKKGVSYGETDEIGFS
PVSGRVSVFDVQATILNQLGFNHEKFTYQFQGRPFRLTDVEGEVIQAIV"
misc_feature 365113..366387
/locus_tag="Halhy_0298"
/note="Protein of unknown function (DUF1501); Region:
DUF1501; pfam07394"
/db_xref="CDD:116016"
gene 366492..367418
/locus_tag="Halhy_0299"
/db_xref="GeneID:10584455"
CDS 366492..367418
/locus_tag="Halhy_0299"
/note="InterPro IPR012307;
KEGG: dfe:Dfer_3698 xylose isomerase domain protein TIM
barrel;
PFAM: Xylose isomerase, TIM barrel domain;
SPTR: Xylose isomerase domain protein TIM barrel;
IMG reference gene:2504769654;
PFAM: Xylose isomerase-like TIM barrel"
/codon_start=1
/transl_table=11
/product="xylose isomerase domain-containing protein"
/protein_id="YP_004445084.1"
/db_xref="GI:332662296"
/db_xref="InterPro:IPR012307"
/db_xref="InterPro:IPR013022"
/db_xref="GeneID:10584455"
/translation="MQNRRKFLAQTLTASTGLFLDNFAALAETPLSFTIPADFSLKML
ATSWGFPGTIDEFCAKAKKAGYDGIEVWAPTKSEDRYALNKATQANGLEVGFLVGSSS
TDFKEHFTQFIQALKNAAALKPLYINCHSGKDYFTLEQAQNIIELSITAAKVAGIPLY
HETHRGRICYSAPITRTLLERIPGMRLTLDISHWCVVHESLLADQKDTVDLALSRTDH
IHARVGHQEGPQVTDPRAPEWADALKAHLAWWDKVVEMKVAQNQPMTILTEFGPPMYL
PTVPYTRQPLADQWAINVHMMELLRSRYLVKK"
misc_feature 366666..367154
/locus_tag="Halhy_0299"
/note="Xylose isomerase-like TIM barrel; Region:
AP_endonuc_2; pfam01261"
/db_xref="CDD:201692"
gene 367710..369137
/locus_tag="Halhy_0300"
/db_xref="GeneID:10584456"
CDS 367710..369137
/locus_tag="Halhy_0300"
/note="KEGG: phe:Phep_2712 hypothetical protein;
SPTR: uncharacterized protein;
IMG reference gene:2504769655;
PFAM: Planctomycete cytochrome C"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004445085.1"
/db_xref="GI:332662297"
/db_xref="InterPro:IPR009056"
/db_xref="InterPro:IPR011429"
/db_xref="GeneID:10584456"
/translation="MLTFLGRFHPLLVHLPIGILLLAVLFAGLSRWERFRHLRDVVSF
TLLMGTLAAIFSCATGYLLSLSGEYDFVLLNQHRNLGIAVAVWGVLMLLLNKTALGKK
WGFLFNLVLLGLVSGAGHLGGSLTHGGDYLTQALPEPYRNWFGLPPLALAKGKIDNIP
EANVYAAVVAPLMQEKCISCHGSSKQKGKLRLDAPEFIDKGGKNGAIVIAGKVADSEL
MKRLLLPKSDEHHMPPKEKNQLSEAEIKLLHWWIESGAQYDKKVKELPQSAEIQPLLA
ALQNGSAEATVTPSIWPEVKVGVPDAKAVQALSAAGAVVLPLGQENNFLSVNFINVPK
AGAKELALLTPLAQQIVSLRLSGTAIGDKELNALVELPHLTKLFLDGSKISDAGLQKL
QSAKYLNYLNLVNTKVSKAGLAHLKNIKSLREVYVFQTAIKGQQDWQELKRLLPKVTI
DTGGYVVKTLVSDTTQVTEAPPKVQ"
misc_feature 368238..368417
/locus_tag="Halhy_0300"
/note="Planctomycete cytochrome C; Region: PSCyt1;
pfam07635"
/db_xref="CDD:203704"
gene complement(369143..369835)
/locus_tag="Halhy_0301"
/db_xref="GeneID:10584457"
CDS complement(369143..369835)
/locus_tag="Halhy_0301"
/note="COGs: COG0775 Nucleoside phosphorylase;
InterPro IPR000845:IPR019963;
KEGG: cpi:Cpin_6958 purine or other phosphorylase 1;
PFAM: Nucleoside phosphorylase;
SPTR: Purine or other phosphorylase 1;
TIGRFAM: Futalosine nucleosidase;
IMG reference gene:2504769656;
PFAM: Phosphorylase superfamily;
TIGRFAM: futalosine nucleosidase"
/codon_start=1
/transl_table=11
/product="futalosine nucleosidase"
/protein_id="YP_004445086.1"
/db_xref="GI:332662298"
/db_xref="InterPro:IPR000845"
/db_xref="InterPro:IPR018017"
/db_xref="GeneID:10584457"
/translation="MKNLLLVAATEFEIAPILKWLETLKAPEANLKFSFPELEVTVLT
TGVGLPLAMFQLTRALTLARFDLVINAGIAGALDKQLELGAVVQVVSETFADLGVEEA
DGSFTDLFKLNLINPVAPPFQDGKMVNTFGSAYDFLPKVHGITVNKVHGYAPSIDNLK
RHTNAKVESMEGAAVFYTCLMYQMPFLEIRSISNYVEPRNRDAWEIALAIENLNDVLK
NMLAGLLENRYE"
misc_feature complement(369185..369826)
/locus_tag="Halhy_0301"
/note="futalosine nucleosidase; Region: fut_nucase;
TIGR03664"
/db_xref="CDD:163384"
gene complement(369845..370666)
/locus_tag="Halhy_0302"
/db_xref="GeneID:10584458"
CDS complement(369845..370666)
/locus_tag="Halhy_0302"
/note="KEGG: mtt:Ftrac_1165 hypothetical protein;
SPTR: uncharacterized protein;
IMG reference gene:2504769657"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004445087.1"
/db_xref="GI:332662299"
/db_xref="GeneID:10584458"
/translation="MNRFISIVAIISGVIFQSLHAQNAILLPISPRSSGMGKTSLNFT
DVHSLFGNQAGMAAVEEFGALGMVEQRFLLADLRQAAIGAVLPTFSGVFGLSLRNFGT
LDYRESGVGLAYARKLSDRLRIGGQLHWAQINLAEYGSRSFFNLDFGIQAELLPNLWA
AAQVRNAIRQEVLTREYTPTVFSAGLAYPLGEKVSLQVELVKDIDFPADLRFGIEYNP
SKLIFLRAGINTAPGGWSFGAGLPILENLVFDFAAAYHPYLGFTPSAGIAYRKKK"
gene 370821..371870
/locus_tag="Halhy_0303"
/db_xref="GeneID:10584459"
CDS 370821..371870
/locus_tag="Halhy_0303"
/note="InterPro IPR019861;
KEGG: cpi:Cpin_1194 hypothetical protein;
SPTR: uncharacterized protein;
TIGRFAM: Conserved hypothetical protein CHP03519,
membrane, Bacteroidetes;
IMG reference gene:2504769658;
PFAM: Protein of unknown function (DUF3308);
TIGRFAM: Bacteroidetes-specific membrane protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004445088.1"
/db_xref="GI:332662300"
/db_xref="GeneID:10584459"
/translation="MKQTILFSILFLPFLVKLQAQDPRFAQFYASPLHVNPAMAGVTS
GSARLAVNYRDLYYSLLGSKPFRTISASWDQRFRAVQKDYFAISGSAMRDQAGLANFH
LTQFNVGGSYLKQVNGGRYAANEQYLVVGAQMGFAQQSLNWSDLSFSAQFDGNGYFFD
PNAPSNEAFDGQSSNPYLDFNAGGLWYAVWDDNKSLYLGGAMHHLNTPSASFTGDDQV
RIFRRYTVHGGGELPLTKQLSLMPAFLFMRQGPMMSTTLGANIRYTNREWKELALRTG
IWSHVNNRADRGLGLDAVIIAAIFELEKWNLGFSYDITSSGLSASNYSRGAFEMSLTY
IRPDRSRSRLICPKL"
misc_feature 370821..371822
/locus_tag="Halhy_0303"
/note="Protein of unknown function (DUF3308); Region:
DUF3308; cl14675"
/db_xref="CDD:209886"
gene 371939..375592
/locus_tag="Halhy_0304"
/db_xref="GeneID:10584460"
CDS 371939..375592
/locus_tag="Halhy_0304"
/note="InterPro IPR011600;
KEGG: peptidase C14 caspase catalytic subunit P20;
PFAM: Peptidase C14, caspase catalytic;
SPTR: uncharacterized protein;
IMG reference gene:2504769659;
PFAM: Caspase domain; PGAP1-like protein"
/codon_start=1
/transl_table=11
/product="peptidase C14 caspase catalytic subunit p20"
/protein_id="YP_004445089.1"
/db_xref="GI:332662301"
/db_xref="InterPro:IPR011600"
/db_xref="InterPro:IPR012908"
/db_xref="GeneID:10584460"
/translation="MTKKCFALFIGINGYTKCNPLSGCINDVLAMSDYFEAFCNKNEL
EPHFTYLLEPSGKNEASKLQNLDVKYTPPTRANIIAATRAMFKQADPQRGDHCLFYYS
GHGSSMRAPAEFSNYESSGRLQTLVCIDSRDPGNRDLIDKELGYLFAEGLHDKAFDPD
HEERPGVHFLSIMDCCHSGNNTRGKQREAFPRMVAGTNQLQSAAELEGFDPKGNVFYA
PLVNGKVDRYNGLHHARYIGFSASRDHESAHEMEFAGSIDGTANELARHGVFTWSLLR
ALYRSGGSLSYAEIMRRVEAEVRNQISRQMPLLWTQGGSRDDELGFFRAKRLDVAEGN
FQISFKEGVWSINAGELHGIMTPATADQKNQFITTDGSKRIIDVKQVETSRSILDASQ
FTEADRDKLLNASIHQLAFTPYFVGFDAAMSADQRELLKGVFNKLFKDKAAFVAISKN
KGQTPHFLIKSVVDKKKRTFYILTKPDSNVPLFPPQVSPQNFVVDLNQVGKWHHTLAI
ANPAVEERFRKDIEVEIQVMEGQRMTEETASEFARIDWKTRLINPDQVTLRYVNKTPP
KIKVKISNTSNFDKYWVGTLYLDSQFGIDPSFSPVTQIGANAESPFVQLMAHGLPIIS
NNLDTAYHKYGVTEITDYLLIFVAADPFDLQYFRQPGIPLGEPNRDAASFWDEEEQEE
HLWFTIKIPIHIQRPLPPVRIGNKVGAEVTRTASNFLSSPLPLSFEAPKGFSASVQMT
NRAQVERTVAVLQNMKSAQTTRELLPPPNLWDGTTTDANTFCYGIDGDPDSHLSVMEF
SDVEGSLSAAAPLQLILNDPLHGKLNDQSPLDLDVPSSEHDCVIPFGYQALADGAGFY
LPMGFTDEEGNIQIAQLPSESPVQVGINPEEGVRSVSGSLKLFFQKIVWSRLSGRHEY
NTLALHPGIDAEPVLYRSKAARYGEAQSKIQAILQEAKKVLLLIHGITGDTLAMREAF
FERSEMHQNFDAILTFDYENLHTDIEKTAQQLQKMLQDCGLAADKRLTVVAHSMGGLV
SRWWIEKEQGANYVHKLIQLGTPNGGVEIASFRKKIATLLTLGINAVERFKPYLATLS
FLTGGLGKRVFNTLNQLHLGSDFLQQLNSGSAPEVPYYLLAGDTSHIEALFAEDDPLW
KKIWRCIKDRGLYILADELIFDEEPNDLAVRLESMKALPWGHQRVLEPLCDHLSYFSN
DESLEMLKEVIAE"
misc_feature 371954..372859
/locus_tag="Halhy_0304"
/note="Caspase domain; Region: Peptidase_C14; pfam00656"
/db_xref="CDD:201376"
misc_feature 374783..>375160
/locus_tag="Halhy_0304"
/note="Esterases and lipases (includes fungal lipases,
cholinesterases, etc.) These enzymes act on carboxylic
esters (EC: 3.1.1.-). The catalytic apparatus involves
three residues (catalytic triad): a serine, a glutamate or
aspartate and a histidine.These...; Region:
Esterase_lipase; cl12031"
/db_xref="CDD:211462"
misc_feature 374939..375556
/locus_tag="Halhy_0304"
/note="alpha/beta hydrolase fold; Region: Abhydrolase_1;
pfam00561"
/db_xref="CDD:201306"
gene 375707..376330
/locus_tag="Halhy_0305"
/db_xref="GeneID:10584461"
CDS 375707..376330
/locus_tag="Halhy_0305"
/note="InterPro IPR008538;
KEGG: dfe:Dfer_4621 protein of unknown function DUF820;
PFAM: Protein of unknown function DUF820;
SPTR: uncharacterized protein;
IMG reference gene:2504769660;
PFAM: Protein of unknown function (DUF820)"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004445090.1"
/db_xref="GI:332662302"
/db_xref="InterPro:IPR008538"
/db_xref="InterPro:IPR011335"
/db_xref="InterPro:IPR012296"
/db_xref="GeneID:10584461"
/translation="MSATAEANIKLPISPPKQPARKISWLEFQRKYLSREDGYKYEWL
NGTVEKSKRGMDKTQLYILRTIQNYFIEQKSQGKVSGNLVSEPDLFFLDNHRRPDITW
LTDEQIDRLTYDSKDVPAFVIEVISTNDQINRVEQKMDDYRAAGVQVVWHVFPLLGKV
HVYGGEKLSSMQVVAGEQICSAAPVLAAFEMKVEELLRKPELPPEKK"
misc_feature 375821..376195
/locus_tag="Halhy_0305"
/note="Domain of unknown function (DUF820). This family
consists of hypothetical proteins that are greatly
expanded in cyanobacteria. The proteins are found
sporadically in other bacteria. They have been predicted
to belong to the PD-(D/E)xK superfamily of...; Region:
DUF820; cd06260"
/db_xref="CDD:99749"
misc_feature order(375878..375880,376001..376003,376076..376078,
376118..376120,376130..376132)
/locus_tag="Halhy_0305"
/note="putative active site [active]"
/db_xref="CDD:99749"
gene complement(376468..377496)
/locus_tag="Halhy_0306"
/db_xref="GeneID:10584462"
CDS complement(376468..377496)
/locus_tag="Halhy_0306"
/note="COGs: COG1463 ABC-type transport system involved in
resistance to organic solvents periplasmic component;
InterPro IPR003399;
KEGG: fjo:Fjoh_4584 hypothetical protein;
PFAM: Mammalian cell entry related;
SPTR: Mammalian cell entry related domain protein;
IMG reference gene:2504769661;
PFAM: mce related protein"
/codon_start=1
/transl_table=11
/product="mammalian cell entry domain-containing protein"
/protein_id="YP_004445091.1"
/db_xref="GI:332662303"
/db_xref="InterPro:IPR003399"
/db_xref="GeneID:10584462"
/translation="MSNEVKIALLALAAIALSFWGIKFIKGKNLLTRTNLYYVEYDDA
LSLQSSSAVVIQGVNVGYVADVKLQNGSEKVLVTLDLKKDLEVPKGTRAEIFANGFMG
TKSVRLQFPPVEERRGMQEPGSYLIPGSVGFLGANIPQEELKQYMVIIQQGIKGAIDS
LNKSLTDDNNPNSPVKKSLKNLELTLANLQSATAAADRMLASSSGDINGSLKNLNEIT
KSLATSKAKIGNIIDNADKFSGQLNEMDLKKTMTEVDQTIAGLKITLGKADQALGSVG
GLVTDMQSGKGTLGRLLKSDSLYNEISKFSMQADSLTKDLKNRPYRYIPLKGRKRVLR
YDKLDAKE"
misc_feature complement(<376645..377403)
/locus_tag="Halhy_0306"
/note="ABC-type transport system involved in resistance to
organic solvents, periplasmic component [Secondary
metabolites biosynthesis, transport, and catabolism];
Region: Ttg2C; COG1463"
/db_xref="CDD:31652"
misc_feature complement(377164..377400)
/locus_tag="Halhy_0306"
/note="mce related protein; Region: MCE; pfam02470"
/db_xref="CDD:111376"
gene complement(377670..379178)
/locus_tag="Halhy_0307"
/db_xref="GeneID:10584463"
CDS complement(377670..379178)
/locus_tag="Halhy_0307"
/note="COGs: COG0860 N-acetylmuramoyl-L-alanine amidase;
InterPro IPR002508;
KEGG: sli:Slin_4902 N-acetylmuramoyl-L-alanine amidase;
PFAM: Cell wall hydrolase/autolysin, catalytic;
SMART: Cell wall hydrolase/autolysin, catalytic;
SPTR: N-acetylmuramoyl-L-alanine amidase;
IMG reference gene:2504769662;
PFAM: N-acetylmuramoyl-L-alanine amidase"
/codon_start=1
/transl_table=11
/product="cell wall hydrolase/autolysin"
/protein_id="YP_004445092.1"
/db_xref="GI:332662304"
/db_xref="InterPro:IPR002508"
/db_xref="GeneID:10584463"
/translation="MTKMIVTFQTKLLLVLSTAIIGFNISLAAAGHGPGKVIQSLRDA
ESNPRINSWDHSSVPWVSPSAYQIKTVVIDAGHGGHDPGCHGAHAQEEHITLAIAKKL
GDLLRSRFPEIKVILTRDRDVFIPLYERAEIANRNNADLFISIHCNAMPGKNSGTYGT
ETYVMGLHTAQYNLDVAKRENAAILLEDNYQKNYDYDPNSPEGHIMISMFQNAYLKQS
LQFAELVENNLNLQAKRKSRGVKQAGFVVLKATAMPSVLVEVGFLTNPAEEQFLNGQY
GQDQVAGAMLEAFEQYKVKAELPDFRSEEPFVNETEKAIEKPVEKPGTYTYGAAVASH
QPNEHQFDNKPAELTKSKEVPAPERANAPGVSTNAYESSPARYGPVPPSSGPVRIIPG
TNLAAQAPKTDAPSSGSNHPTAYVFKIQLAAGPTAPNPAETKWKTFPYPLEVTQEDNL
YKVRTQAFVDYQLANQARMRCKELGYPDAFIVAMKDGKRISLPDAKKALGIP"
misc_feature complement(378303..378974)
/locus_tag="Halhy_0307"
/note="N-acetylmuramoyl-L-alanine amidase [Cell envelope
biogenesis, outer membrane]; Region: AmiC; COG0860"
/db_xref="CDD:31201"
misc_feature complement(378315..378971)
/locus_tag="Halhy_0307"
/note="N-acetylmuramoyl-L-alanine amidase or MurNAc-LAA
(also known as peptidoglycan aminohydrolase, NAMLA
amidase, NAMLAA, Amidase 3, and peptidoglycan amidase; EC
3.5.1.28) is an autolysin that hydrolyzes the amide bond
between N-acetylmuramoyl and L-amino...; Region:
MurNAc-LAA; cd02696"
/db_xref="CDD:119407"
misc_feature complement(order(378402..378404,378741..378743,
378906..378908,378948..378950))
/locus_tag="Halhy_0307"
/note="active site"
/db_xref="CDD:119407"
misc_feature complement(order(378741..378743,378906..378908,
378948..378950))
/locus_tag="Halhy_0307"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:119407"
gene 379243..381975
/locus_tag="Halhy_0308"
/db_xref="GeneID:10584464"
CDS 379243..381975
/locus_tag="Halhy_0308"
/note="KEGG: cpi:Cpin_6190 organic solvent tolerance
protein OstA;
SPTR: organic solvent tolerance protein OstA;
IMG reference gene:2504769663"
/codon_start=1
/transl_table=11
/product="organic solvent tolerance protein OstA"
/protein_id="YP_004445093.1"
/db_xref="GI:332662305"
/db_xref="GeneID:10584464"
/translation="MQNNRIHFWKATSVWAIFVFCLGVVPLAAQDPFPKLPDSLNVAD
TVPLAFSDTFQLRARPNTIRFSNDSLDAPVEYNAVDSMVLDNIAKKIYLYGQAFVKYT
DISLKAEFIELDWANNIVTAELREDTVTGKVIGVPEFTEGEQVFTAKRMRYNFKTKKG
MVYDVRTTQTDLFVHGSRMKLIQEEKKDTSKPDNILFGQKLLFTTCSAEHPHFGIRST
KQKIIPDKLAIVGPSQIEIMGVPTPLWLPFGFFPLKKGRSTGLLFPRDYEYSENWGFG
LRDIGWYFPVGDHLNLALRSNIYFKGTYGLSLQADYRKRYKFSSGLNLRYDSQVQENR
STGKYGRTNSFGFQYNHNQEAAAHPSAKFSANINIQGNRNQSRVFNDAYSVLNSQLYS
NANFSKNWPGKPYSLTASFNHSQNLTNRKATINFPNVQFQTQTLYPFKKKVSNDKWYE
TIAFRYAGEARNTFAATDTTLFTKKMWEDAVAGARHNLDANTSFKVLKYINVNPNVTF
SEVWQLKSIAKSFDSSPVITSDTLDDPFDPDPQKSIIRYDTVFGTVKTDTLSGFAAYR
QFSAGISLNTRIFFTLKTGKLTPLRAVRWEMRPNLSFNYSPNYLNPALNYFDSVQLDS
RFPLRKQIYSRFDNIAVYGTPSISGRQMAIGYSLNNIFQAKAYSKKDSMEKKIKLIDN
LVIGGNYNYAADSLKWSQLNVSTTARFFKGITTMGFFMSLDPYLENSQGVRYNRTVWQ
QGRIIPRMETARFSFVTDLTVQKIREMFQGSKEEVVTDVRERPQQQGSQNQDFLSLFE
NFSISHNLDFFWETRGQETTFRMGTNSINAQGNIELTKNWGVSVGNIGYDFVNKGLSY
PAIGFTRDLHCWQLSFNWQPQRGTYVLNIQVKPGTLDFIKIPYQKNNFDTRSGF"
misc_feature 379444..>380673
/locus_tag="Halhy_0308"
/note="Organic solvent tolerance protein OstA [Cell
envelope biogenesis, outer membrane]; Region: Imp;
COG1452"
/db_xref="CDD:31641"
gene complement(382092..382868)
/locus_tag="Halhy_0309"
/db_xref="GeneID:10584465"
CDS complement(382092..382868)
/locus_tag="Halhy_0309"
/note="InterPro IPR019115;
KEGG: cat:CA2559_10573 hypothetical protein;
PFAM: Protein of unknown function, Porph ging;
SPTR: uncharacterized protein;
IMG reference gene:2504769664;
PFAM: Protein of unknown function (Porph_ging)"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004445094.1"
/db_xref="GI:332662306"
/db_xref="InterPro:IPR019115"
/db_xref="GeneID:10584465"
/translation="MRNLFFLFFGLLSLAVSAQNNAGTIVYKQTVFMRREAQAMAPAG
VDQNMTRNIPESMTTEFELNFTANESFYKELASRTDESAGEGGGMRFMMRRFNPPIYK
DLANNRQVEENDLFGKQFLIDDVIPTRAWKIAGQQKKVLDYPCISATFTDSIMGRARV
VTAWFAPTLPVAIGPQGYGGLPGMILEVEFDGGRSVVTAAEVKLQKPAEGAIKIPEKG
KKVTRAEYQKIQAEKMKEMRESGMMQGRQGGGPGMIIIRN"
misc_feature complement(382167..382826)
/locus_tag="Halhy_0309"
/note="Porphyromonas gingivalis paralogous family
TIGR01200; Region: TIGR01200"
/db_xref="CDD:211631"
gene 383187..384632
/locus_tag="Halhy_0310"
/db_xref="GeneID:10584466"
CDS 383187..384632
/locus_tag="Halhy_0310"
/note="COGs: COG5002 Signal transduction histidine kinase;
InterPro IPR003661:IPR003594;
KEGG: lby:Lbys_2833 integral membrane sensor signal
transduction histidine kinase;
PFAM: ATP-binding region, ATPase-like; Signal transduction
histidine kinase, subgroup 1, dimerisation/phosphoacceptor
region;
SMART: ATP-binding region, ATPase-like; Signal
transduction histidine kinase, subgroup 1,
dimerisation/phosphoacceptor region;
SPTR: Integral membrane sensor signal transduction
histidine kinase;
IMG reference gene:2504769665;
PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like
ATPase; His Kinase A (phosphoacceptor) domain"
/codon_start=1
/transl_table=11
/product="histidine kinase"
/protein_id="YP_004445095.1"
/db_xref="GI:332662307"
/db_xref="InterPro:IPR003594"
/db_xref="InterPro:IPR003661"
/db_xref="InterPro:IPR004358"
/db_xref="InterPro:IPR005467"
/db_xref="InterPro:IPR009082"
/db_xref="GeneID:10584466"
/translation="MGGSLLLLAVFQIYWLNKVYQEQEDLLRHQSENVFIQTVRDLQD
SLIQRKIVFMEEDPKRSIKQVIPPNFQFEPKTPPSSRPSTMVVVRMDSVTFVHRDTHP
EKRPINFYLRRQPKDDRIRRSFGLRRGIGLALSKIPKGTDAMFELSDDTIPKDQLIQR
YQNQLKKNDLPLAFSVTKIDSLPDEMSKEGIVHFAPAGIPPFQFYRLAMEDYQWFLLK
RMTPQMIFGLFLLLFTGLTFWVIFRSLRQQQQLTRLKNDFISNITHELKTPIATVSVA
LEALKDFNALNNPQRTREYIDISQHEMQRLSMLVDRVLKMSMFESQTLQIQREPLNLK
SAIQKILESLSLQFEKQRAKVSFTTEGNDFQLNADPIHLTNVVYNLLDNALKYSKEEP
KIDIALTEHNGTLTFSVKDQGIGIPKEYQGKVFDQFFRVPHGDKHNVKGYGLGLSYVA
GVIQQHGGQIMLDSEPDKGTRFTVFLPRYNN"
misc_feature 383949..384137
/locus_tag="Halhy_0310"
/note="Histidine Kinase A (dimerization/phosphoacceptor)
domain; Histidine Kinase A dimers are formed through
parallel association of 2 domains creating 4-helix
bundles; usually these domains contain a conserved His
residue and are activated via...; Region: HisKA; cd00082"
/db_xref="CDD:119399"
misc_feature order(383958..383960,383970..383972,383982..383984,
383991..383993,384003..384005,384012..384014,
384069..384071,384081..384083,384090..384092,
384102..384104,384111..384113,384123..384125)
/locus_tag="Halhy_0310"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:119399"
misc_feature 383976..383978
/locus_tag="Halhy_0310"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:119399"
misc_feature 384303..384614
/locus_tag="Halhy_0310"
/note="Histidine kinase-like ATPases; This family includes
several ATP-binding proteins for example: histidine
kinase, DNA gyrase B, topoisomerases, heat shock protein
HSP90, phytochrome-like ATPases and DNA mismatch repair
proteins; Region: HATPase_c; cd00075"
/db_xref="CDD:28956"
misc_feature order(384321..384323,384333..384335,384342..384344,
384411..384413,384417..384419,384423..384425,
384429..384434,384513..384524,384570..384572,
384576..384578,384591..384596,384600..384602)
/locus_tag="Halhy_0310"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28956"
misc_feature 384333..384335
/locus_tag="Halhy_0310"
/note="Mg2+ binding site [ion binding]; other site"
/db_xref="CDD:28956"
misc_feature order(384423..384425,384429..384431,384513..384515,
384519..384521)
/locus_tag="Halhy_0310"
/note="G-X-G motif; other site"
/db_xref="CDD:28956"
gene 384943..385638
/locus_tag="Halhy_0311"
/db_xref="GeneID:10584467"
CDS 384943..385638
/locus_tag="Halhy_0311"
/note="COGs: COG0745 Response regulators consisting of a
CheY-like receiver domain and a winged-helix DNA-binding
domain;
InterPro IPR001789:IPR001867;
KEGG: lby:Lbys_2834 two component transcriptional
regulator, winged helix family;
PFAM: Signal transduction response regulator, receiver
region; Signal transduction response regulator,
C-terminal;
SMART: Signal transduction response regulator, receiver
region;
SPTR: Two component transcriptional regulator, winged
helix family;
IMG reference gene:2504769666;
PFAM: Response regulator receiver domain; Transcriptional
regulatory protein, C terminal"
/codon_start=1
/transl_table=11
/product="winged helix family two component
transcriptional regulator"
/protein_id="YP_004445096.1"
/db_xref="GI:332662308"
/db_xref="InterPro:IPR001789"
/db_xref="InterPro:IPR001867"
/db_xref="InterPro:IPR011006"
/db_xref="InterPro:IPR011991"
/db_xref="InterPro:IPR016032"
/db_xref="GeneID:10584467"
/translation="MGTKVLYVEDELFLGKIVQESLESRGFEVQMISDGAEVMKVFTN
FQPDICLLDVMLPNRDGYELGLEIRALFPSLPIIFLTAKTQTEDVLKGFNSGGNDYIR
KPFSMEELIARIHNILNLSGQAIAEPPVEQNGVIALGQYQFDLRKYELRFQAQVRKLS
HREAELLKILADHRNLTVERKDIMLQIWGDDSFFNSRNLDVYITRLRDYLREDDRVQI
ITLKGVGYQFIVD"
misc_feature 384952..385635
/locus_tag="Halhy_0311"
/note="Response regulators consisting of a CheY-like
receiver domain and a winged-helix DNA-binding domain
[Signal transduction mechanisms / Transcription]; Region:
OmpR; COG0745"
/db_xref="CDD:31088"
misc_feature 384958..385296
/locus_tag="Halhy_0311"
/note="Signal receiver domain; originally thought to be
unique to bacteria (CheY, OmpR, NtrC, and PhoB), now
recently identified in eukaroytes ETR1 Arabidopsis
thaliana; this domain receives the signal from the sensor
partner in a two-component systems; Region: REC; cd00156"
/db_xref="CDD:29071"
misc_feature order(384967..384972,385099..385101,385123..385125,
385183..385185,385240..385242,385249..385254)
/locus_tag="Halhy_0311"
/note="active site"
/db_xref="CDD:29071"
misc_feature 385099..385101
/locus_tag="Halhy_0311"
/note="phosphorylation site [posttranslational
modification]"
/db_xref="CDD:29071"
misc_feature order(385108..385113,385117..385125)
/locus_tag="Halhy_0311"
/note="intermolecular recognition site; other site"
/db_xref="CDD:29071"
misc_feature 385249..385257
/locus_tag="Halhy_0311"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:29071"
misc_feature 385348..385626
/locus_tag="Halhy_0311"
/note="Effector domain of response regulator. Bacteria and
certain eukaryotes like protozoa and higher plants use
two-component signal transduction systems to detect and
respond to changes in the environment. The system consists
of a sensor histidine kinase and...; Region: trans_reg_C;
cd00383"
/db_xref="CDD:29475"
misc_feature order(385420..385422,385477..385482,385534..385536,
385543..385545,385567..385572,385600..385602,
385615..385617)
/locus_tag="Halhy_0311"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:29475"
gene 385995..400715
/locus_tag="Halhy_0312"
/db_xref="GeneID:10584468"
CDS 385995..400715
/locus_tag="Halhy_0312"
/note="InterPro IPR011110:IPR002102;
KEGG: dol:Dole_1791 hypothetical protein;
PFAM: Cellulosome anchoring protein, cohesin region; Two
component regulator propeller;
SPTR: Hypothetical cytosolic protein;
IMG reference gene:2504769667"
/codon_start=1
/transl_table=11
/product="cellulosome anchoring protein cohesin subunit"
/protein_id="YP_004445097.1"
/db_xref="GI:332662309"
/db_xref="InterPro:IPR008965"
/db_xref="InterPro:IPR008970"
/db_xref="GeneID:10584468"
/translation="MKRPLHLSTFAFGDSSSAFFPTKMGKPIYLSQKIMWVMLGLISL
AGSLSGQSINTGNVTTSPFCPGDAISIPFTVDTSGRSFGAAGGPAGGPTLITYQAQLS
NTAGSFGSGTTNLASIQSLSGSNKQAITGLTINTTIPTGLPYSNTYRVRVIKTAPGTV
NQTLIGTNITINPNSNGNLTIRAAGFTNPPPAGTICQGADYDLQFTNNNTFNPGNLFI
AQLDNNINFTSPVNIGVLASTASSGTIKVVIPFTESGTGYYIRYIATNSVPGGFESCP
SGAYTIPAVRPFTDPGNDLECTGGNASFNVSGGADSYQWQKVCSPPFSNITMGVGGSG
VTFDIAKDGVDVFAATPTELSISRNSGATFTESKLVGQTVNKVFVVGNTVYAATNMGI
FISNDNGVNFGPPVNTSGPNFLPQNNITALAVSAGVVYAGTGSAGLAIGTPGSAFAVR
TTANGLGSNVIFDVFVDGAYVYVGTQGGLSVSSDGGASFVNYTTADGLGSNIVYSVFQ
RDNIVYAGTDFGFAYATSYNNTPDLVFTNILGGLGSPIVRDIFVSGSRIYAATTGGLS
VANVGSTAFTTITVGLVNPNVYGVKEDAGTVYLATLGGVAFTTFTTMNVGGGGTNYNF
TVTPADSWCRFQVVVNRGGCTLISNQVRVADIPPNITAVGTGPAGVGDGPTTCGGVNG
EIKISGLVPLTKYRLVYTGTNGFTDSGDTITANAQGEFLNTLFPAGSYDLSVQSLVNP
PVPACFSNTVNVILNDPLPPSAVTANLLDASICAGENITVNLPSALANTPGVSVEQYK
WYTDLLGTTPANPATTTALTYSPAASPAVGTGSIFVRKRDVVTLCDGPMLTLNYAVNP
RPSISHAKTDPSSAVATDGSITISLGANPGTAPFTLQYTTPANVLVTVNNATFPQVIA
GLGIGNYTMFSVTNSEGCQSNIIASCPLLPPPPPDVIGGKVLQTVVCEIPGTAGGYFQ
QAEEVCASDQLVDEGVGSIAVGRIRRTSINPVNDEKVEMRGFVQFDLNAFVPKNATIE
KIEYRPTSLTGGFQQVCEVDVVNTGATGDIQFDITQVKANNYAPYIGYQQSINDDLYD
VKYNDFVIAKDAIGALTDLGPQGVIDAQQRLNDDGIFQVGLALSGNDFDLPVYQFHGM
VFAPSGAHTLCITYTLKDYGDLPEPKFATDLAGGLVGPSHRIDLIDTNTDPNAETFEP
AMFIGLTPPDGEADGQPSVFADGDNNDDVNDEDINSAWFTNPATDDSLIAGNTITLSF
PVTNNLPGPVNVIAFFDWNNNGVFENDTERYSTTAPNGASTVTFLDLQIPIYATGNVG
VRVRMTSGAVFDAYGPAPDGEVEDYLLRGIAGFDYADLPDSEPTLTPGATGIGNYETI
FAIDGSRGPRHLINPNLRIGNTIDAELDGQPQANAFGDDINGIDDEDGVIQPDSVVRG
KPARFRVFVTNKTMANAYLMGFVDWNNDGSFEDASPNQKSGPITIAPGFSGYYDVIFQ
VPVNPNPLPERVASRFRLFNVNNASTLLSTGPAQGVLTDVQGEVEDSWVTIVGYDWGD
LGEPRYITDAQGGQAGPSHKIYAIDNGAGPVTSLYIGATPPDAEPQGNPNQPATGDDN
NGIDDEDLSPNNFLNPTTLLPYPLIATDSTVLRIPVTNNFLNKTATLWAFIDWNGDGQ
FNGVTETYQRTVPAGFIGNVNMGIRIPNIALSDSIGVRIRITSGNILDAYGQAPDGEV
EDFMVELRGAEYGDLPDATAGTGNNDYQTRRVYNGPRHGVPVTPLVFMGKEIDTEADG
QPTERANGDDNNQIPDDEDGIVFLGPLVPGSTSQLSFSGTNNTTDTATLHIWADWNSD
GILEYVDSVDVGPTTTVAGQIVNFNVPANATFAGGKVFFRFRFTTDTIFNVAPSPNGS
AADGEVEDYFLPIFKMGNLVWEDRNHNGLQDAEEINLGIENVRVVLRFGGVDPITGRC
DSVNQNTATNPNTIAISGGTDLVRDSILQVFTDSSGLYCFTGLIEGVYQIIAVDTFGL
TPTRFDYIKNVTEEDLDSDGKPLKNPWDYVSGDRRQSKSQMFKLKIDQIGTDEEGILD
QGNPQLLDPNAVGALPDDRVEQRIDFGYVGLDLGDLAESGSNPSLTNFITSENGTKPE
GPKHIVTPDLKLGTCQDVEWQGQPDQDAGAEFKPAPDAGGDDPIADFSNYPNFPYDPS
QGRRWPFHDAANACGDDEDGIRFLTPMIAGYDAIISVKYAAKINLNGPDAYLHAWFDW
NGDGNFDNGAGVIDANEHIIFYKRDGVVVPNMLEANTQAVKLEMSYLTSATDSLTLTF
KVPANVAYNNGNILSRFRISFDPQLGPNGILAPSLNFPDPQPGAGVSQVPGGVIPYGE
VEDYFISLSKVGNTVFEDRDYDGFQDDLEPGIANVPIQLQFAGADGILNSGDPYEFTY
HDTTDANGRYFFCGLIGNVDPSGIPNPVYQLIVKDPAGMTATFNNPDPSDDACIDDNS
NGDDLLIDNRITTDTFTITNPMMLCLDENERNDVGGLLPGSNLPPALDALNNFPDNQY
DETRDFGYTGFDYGDLPIASVKPGSNYLTLRDSMNALFNNKFGARHAIQPRLYLGKGV
DGELNGKPDDDAGSKAGGDDDDQGAFKKGVTADDETGVRLLSPLLPGEFAYIKVNYTS
QDTTNGGYINRTAYLDAFIDWNGNGVMDIPAEKVEFTHQSTSSASPFSTNNLVTILPP
LTRTATLPATGANGVDSTILAFRVPTTAVFDSGVVFMRFRLGWTNYAASYPMSFPNGL
GADNNIFHMATSPYVKAYEPFNDVALPDVANLGRYPYPQGEVEDYGIPVAKIGNLSWF
DHDVFGDQDTREDVVDSLHLVLIWGGVNGTTGAFDTVGYQTSLTSLGTVTDILYNRSI
APPTVGTYTPGALVKTGISPAADSGLYSFRGLIPGIYYVLPMKYFATDSASFVNAWPK
HRVVTLQDNPGVSDGQDSDGRTSGVGGTSRGPGAFVKILDGNSRQPEVCVNDRPLFAA
PNPINDAREGGSAAELRANDAIENGKRDADDNANPFTPAFFPDNQWDKSVDIGWVDEP
NVEASMDIVGVNFPTSQICGNFNVITHLCVKNPQEVPLDSFQMFFNLQDAYGNALYTG
TKPIITIVDSAFVTNPAHVKIRKSSLVNFKTSVNAKPKDLLVVNPNYNGTTDTKLLVP
TSEKPHFLLRGDSILCVQIEFEIDPSKIDAYPWMLSASVTARAVGFNKATGDKRPLTD
FRFFHPRFGKSIVVFDSTDEFDDPMPMAGLVYPDGGDGILFEGMVADRGLKGDYQLPY
VSPNVTGRDKYEDEDDKAIMNDSCWINTKWNSGYKEFTIALDANCQAIVNADLLVPNF
IAACGFDKYPMGSYYRVIIQDKWTEETLWASVDRVPFDVNKYLDRQLIYKVRSVANHC
NVIWGPIIFTDKIPPVVTCPPNTSRKLNAKNEIVGTYTFVCTDIDSIYNVEKSWKNVN
YPYYTGLATATDACGAPRLENIKDEIIYLSDCNESAANGYIYAQIRRTFIFIDRMGNR
ANCSQLINFYRPTIKLPDCKISVPNNKAKGDTLILPIDLVGKKYNIKESVPYFINGSG
DTIYITGKDYCGFSFNYTDEVSFETGQGRCGKKIIRTWSIFDWCYGHGANYPNYLMQP
ESNNYCYAGSSWAGGRYTWQQTIIVGDDEKPIIFALDIDKDGHVGRFDPGPAPNYPNS
PKDSTLTYDPDDVLIYSTSPMDCTGNFLFNRDHFKVIEQSDWCYDIRVVERVAILDLD
ERPTGKFEFKIHPFVKITGDCIKGYTVIGVPMKGDWFIEVRVYDACYSESTALIPVRI
MDQISPVVICDDKLNITLDNQGNGFVAAKDLDEGSWDNCNKLDWVKVRRPVQDACVAT
LLKFPRVIDVNKNGKIDPYDPSKGLVDLNGNGRTNDDYDYIDLNSDRIPQLNEYFTIG
EYFTKNKPAAGNGSDMIMTPLMDTVPFFCCDGGSLMVELWGADKFGNRNYCWNNIQLE
DKTPLECIAPWEVSVLCTDKNLAFIDSKVQSAKIFGDVVISSGGICVLADTTYTVVKR
LKCGAGTIERIWTLTKQTAHGPIVTTCKQIIRVLPVREYDICFPKDVDQRDCKIPVID
TTVVKEWACDILAVNVSDKRYDASDDECYKIFRTYTVIDWCAYDDRCGDPMAEGAIFV
VERSLWENYGKKPVYVLVRDRDRDQNEEFWLSKDLNTNNEDDIYVRGDADFGGLTRVG
TSTVSTAYMPKCDDAFLDNPYGLPVGEYYHSFMYTQIIKVYDEVPPVVTGDPGKFCIR
EGEDCLANIKMVVKATDNCTDVVTLETNMLMIAPFQTTVAGSMILYGTPRWSTKALGN
GQFEINVSNLPQGKHDLIVVVRDECGNLSAATRIPFTVEDCKAPAPICINGLSTELMP
DASGTGGMMTVWATDFVASKIYDCNGQGPETNGSGKLVTKYSINRVGSPVVESQTNLV
FTCADAGKPIQIELHAWDNAGNHDFCVTFIDIQDNRQVCTPGNVNTGVISGLIATDES
EPVAGVMVNVSGAATLNQPTANAGVFAFSNLVKGSDFTVSAQLDKDHINGVSTFDLVQ
IQKHILGVKTLEGPYRQIAADVNNSKSISTLDMIQIRKLILNIDDRFKSVPSWKFVDA
TYKFADAQNPFAAEFPEVVNVNDLVGNVKADFVAIKMGDVNGNAATITGLAATEIRAD
RQFLLAAEDMAMKAEGHYEVAIRAKDLRNIQGYQFTLNYDISALELEGIEYGVAKADN
FGIFKERGAITTSWNLSSSLGAAGNEVLFTLKLKARTAVKLSEVLNISSQLTPAEAYD
TQNEAIGVKLSFGAISGQDFAVLRQNTPNPFHDETLVGFYLPKAAKAVLTIRDTKGSL
VYRTEGNFVKGENKVILKQADLRASGVLYYTLETADFTDTKKMILLNR"
misc_feature <386271..388154
/locus_tag="Halhy_0312"
/note="Large exoproteins involved in heme utilization or
adhesion [Intracellular trafficking and secretion];
Region: FhaB; COG3210"
/db_xref="CDD:33023"
misc_feature 400101..400448
/locus_tag="Halhy_0312"
/note="Cohesin domain, interaction parter of dockerin;
Region: cohesin_like; cd08546"
/db_xref="CDD:176098"
misc_feature order(400143..400148,400251..400253,400263..400271,
400389..400391,400401..400403,400407..400409)
/locus_tag="Halhy_0312"
/note="dockerin binding interface; other site"
/db_xref="CDD:176098"
gene 400814..401305
/locus_tag="Halhy_0313"
/db_xref="GeneID:10584469"
CDS 400814..401305
/locus_tag="Halhy_0313"
/note="SPTR: uncharacterized protein;
manually curated;
IMG reference gene:2504769668"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004445098.1"
/db_xref="GI:332662310"
/db_xref="GeneID:10584469"
/translation="MKRHSLFLVGALVFSAVLGKAQSLSPEVISTAGGKMQAGSIQLA
WTLGETAVARWNTPQGMVTEGFHQPVLEVTLLPEYTAPTVRIAPNPVQSTLNVQLQEQ
TKQILFANLVDVQGRVLIKRTTLQLGNTELDLSNLPAGMYFLNVMHQNGKTLEVFKVV
KTR"
misc_feature 401069..401296
/locus_tag="Halhy_0313"
/note="Por secretion system C-terminal sorting domain;
Region: Por_Secre_tail; TIGR04183"
/db_xref="CDD:200434"
gene 401355..403169
/locus_tag="Halhy_0314"
/db_xref="GeneID:10584470"
CDS 401355..403169
/locus_tag="Halhy_0314"
/note="KEGG: fps:FP2204 phage protein;
SPTR: Probable phage protein;
IMG reference gene:2504769669"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004445099.1"
/db_xref="GI:332662311"
/db_xref="GeneID:10584470"
/translation="MKKILLSLIFANLIGVLVLTAQSTSQGMNYQAVARDASGQIIAN
LPISLKISLVSKNGSQAEYFSETHQVQTDNNGLFKIIIGEGKDASGKLSEVPWSKDQV
WLNIALDTKGGKNYNLVSSAKLLSVPYAFHAATASQIVEGATAIDLPIEKNQSIYWTT
GGNTNTRPATHFMGTRDNQDVVFKTNNTTRVILTKGGQMQVKSGVSGADSDPASYPIT
VQGSRQGIYIMVNESRDNDNNFVTFADPNGIWGRIEGQTIPELEASSEYQTQVALFTL
QAISLAAQVIAFGAEAIGLAASGLGAAAAVGAAANAIALGIEAASLATEWATWESDLK
ANIGVTYESGAGDYAEWLERKKDERDLHYGEIVGVQGGFVSLNTTGVDHYMVVSKRPI
VLGNVPQPEKEQNFEKVAFMGQVPVKVVGAVAVGDYIIPSGNNDGLGVAIHPADMKLG
DYAKIVGVAWQAAKEAPINYVNVAVGINTNDLTRKVDELNQKVESILAYLEGKAPLQT
DGSVLNAAATAKPQTTFSKLYSDEEFDQMIDNNADFLTQMYAEAKVQLIKQGYDANKN
PKMFEMLDNPLPFIKEVRRNPAYITQWAMVDQKIKSKK"
gene 403265..405094
/locus_tag="Halhy_0315"
/db_xref="GeneID:10584471"
CDS 403265..405094
/locus_tag="Halhy_0315"
/note="KEGG: fps:FP2204 phage protein;
SPTR: Probable phage protein;
IMG reference gene:2504769670"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004445100.1"
/db_xref="GI:332662312"
/db_xref="GeneID:10584471"
/translation="MVQSLSGQTASTAGMNYQAVARDVFGKLLAKQTIALKISFSSGE
GEAKSHYSEIHQVTTDELGLFNLVIGEGQDASGKLSDIPWATDQIRLNVALDAAGGRE
FALMGSSELHSVPYAYYATTASQLVDESSAIELPTEKNQSIYWHTGGNTATRPETHFL
GTRDNQSLVFKTNNTTRVILTAGGQMQVYSGVSGNDSDPASYPITVEGSQQGIYVMVN
ESRDGDNNFLTFADPEGIWGRVEGQTIPELEASQEYRTQVALFTLSAVSLAATLVATI
AEAAGLYAAAVAAAATLILAFATPGFTAAAVAVTANGVSIGVEAAALATEWATWESNI
KGNIGVTYQSGAGDYAEWLQRGKDEPDMHFGEIVGVSGGKISLNTNNAQHYMVVSRRP
IVLGNAPQPDREHLYEKVAFMGQVPVKVVGKVDVGDYIIPSGNNDGLGVAVKPSQMMI
SDYAKVVGVAWEAAKEAPLNYVNIGVGLTTNDLAPKVEDLSHKVDNIIAYLEGKAPLR
SSTAKAVNPVAAPAAQPASAKMVTDEEFDQFLDKNADLVNQIYAQTKQELLRQGSDLS
NYPELQAMFDDPIPAIKKMRRDPQLVSQWAMVDKKIQKELKKK"
gene 405469..405843
/locus_tag="Halhy_0316"
/db_xref="GeneID:10584472"
CDS 405469..405843
/locus_tag="Halhy_0316"
/note="COGs: COG0838 NADH:ubiquinone oxidoreductase
subunit 3 (chain A);
HAMAP: NAD(P)H-quinone oxidoreductase subunit 3;
InterPro IPR000440;
KEGG: lby:Lbys_3220 NADH dehydrogenase subunit A;
PFAM: NADH:ubiquinone/plastoquinone oxidoreductase, chain
3;
SPTR: NADH dehydrogenase subunit A;
IMG reference gene:2504769671;
PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain
3"
/codon_start=1
/transl_table=11
/product="NAD(P)H-quinone oxidoreductase subunit 3"
/protein_id="YP_004445101.1"
/db_xref="GI:332662313"
/db_xref="InterPro:IPR000440"
/db_xref="InterPro:IPR023043"
/db_xref="GeneID:10584472"
/translation="MESKFDYLAILIQLAVALGFVVTTMIVTHLLGPKRHSAQKAEAF
ECGIESVGNARLPFSIKYFLTAILFVLFDVEVIFFYPWAVNFKELGSSGYLKMLLFIA
PLFLGYLYILKKGALNWEKGQI"
misc_feature 405487..405828
/locus_tag="Halhy_0316"
/note="NADH:ubiquinone oxidoreductase subunit A;
Validated; Region: PRK06602"
/db_xref="CDD:180638"
gene 405913..406452
/locus_tag="Halhy_0317"
/db_xref="GeneID:10584473"
CDS 405913..406452
/locus_tag="Halhy_0317"
/note="COGs: COG0377 NADH:ubiquinone oxidoreductase 20 kD
subunit and related Fe-S oxidoreductase;
HAMAP: NAD(P)H-quinone oxidoreductase subunit K;
InterPro IPR006138:IPR006137;
KEGG: dfe:Dfer_4087 NADH dehydrogenase subunit B;
PFAM: NADH:ubiquinone oxidoreductase-like, 20kDa subunit;
PRIAM: NADH dehydrogenase (quinone);
SPTR: NADH-quinone oxidoreductase subunit B 2;
TIGRFAM: NADH:ubiquinone oxidoreductase, 20kDa subunit;
IMG reference gene:2504769672;
PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit;
TIGRFAM: NADH-quinone oxidoreductase, B subunit"
/codon_start=1
/transl_table=11
/product="NAD(P)H-quinone oxidoreductase subunit K"
/protein_id="YP_004445102.1"
/db_xref="GI:332662314"
/db_xref="InterPro:IPR006137"
/db_xref="InterPro:IPR006138"
/db_xref="InterPro:IPR014406"
/db_xref="GeneID:10584473"
/translation="MAVKLVESPEGHTGQGFFATSFDKAIGLARANSIWPLPFATSCC
GIEFMATMGAHYDLARFGSERLSFSPRQADLLMVMGTIAKKMGPVLKQVYLQMAEPRW
VLSVGACACSGGIFDTYSVLQGIDKVIPVDVYVPGCPPTPEAIIDGVMKIQELVKNES
LRRRNSDEYTQLLASYGID"
misc_feature 405919..406446
/locus_tag="Halhy_0317"
/note="NADH dehydrogenase subunit B; Provisional; Region:
PRK14820"
/db_xref="CDD:184833"
misc_feature 405958..406389
/locus_tag="Halhy_0317"
/note="NADH ubiquinone oxidoreductase, 20 Kd subunit;
Region: Oxidored_q6; cl15792"
/db_xref="CDD:210192"
gene 406465..406977
/locus_tag="Halhy_0318"
/db_xref="GeneID:10584474"
CDS 406465..406977
/locus_tag="Halhy_0318"
/note="COGs: COG0852 NADH:ubiquinone oxidoreductase 27 kD
subunit;
HAMAP: NAD(P)H-quinone oxidoreductase subunit J;
InterPro IPR010218:IPR001268;
KEGG: chu:CHU_1380 NADH dehydrogenase I chain C;
PFAM: NADH:ubiquinone oxidoreductase, 30kDa subunit;
SPTR: NADH dehydrogenase subunit C;
TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C;
IMG reference gene:2504769673;
PFAM: Respiratory-chain NADH dehydrogenase, 30 Kd subunit;
TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C"
/codon_start=1
/transl_table=11
/product="NAD(P)H-quinone oxidoreductase subunit J"
/protein_id="YP_004445103.1"
/db_xref="GI:332662315"
/db_xref="InterPro:IPR001268"
/db_xref="InterPro:IPR010218"
/db_xref="InterPro:IPR020396"
/db_xref="GeneID:10584474"
/translation="MTATDITHEYIVEKLSTQFPGKILSQEEPYGLLSLNVPRENAIE
IIKWLKEDTELQFIFMTDLCGVHFPEQTGFELGVIYHLHSLIHNIRLRLRTFFPANDP
VVPTATTVFRAANWMERETFDFFGIRFSGHPDLRRILNVDDMTYHPLLKQYPLEDDTR
TDKEDKYFGR"
misc_feature 406495..406965
/locus_tag="Halhy_0318"
/note="NADH dehydrogenase subunit C; Provisional; Region:
PRK06074"
/db_xref="CDD:180384"
misc_feature 406573..406929
/locus_tag="Halhy_0318"
/note="Respiratory-chain NADH dehydrogenase, 30 Kd
subunit; Region: Complex1_30kDa; cl16917"
/db_xref="CDD:211513"
gene 406977..408191
/locus_tag="Halhy_0319"
/db_xref="GeneID:10584475"
CDS 406977..408191
/locus_tag="Halhy_0319"
/note="COGs: COG0649 NADH:ubiquinone oxidoreductase 49 kD
subunit 7;
HAMAP: NAD(P)H-quinone oxidoreductase subunit H;
InterPro IPR001135;
KEGG: sli:Slin_5101 NADH dehydrogenase (quinone);
PFAM: NADH-quinone oxidoreductase, subunit D;
PRIAM: NADH dehydrogenase (quinone);
SPTR: NADH dehydrogenase (Quinone);
IMG reference gene:2504769674;
PFAM: Respiratory-chain NADH dehydrogenase, 49 Kd subunit"
/codon_start=1
/transl_table=11
/product="NAD(P)H-quinone oxidoreductase subunit H"
/protein_id="YP_004445104.1"
/db_xref="GI:332662316"
/db_xref="InterPro:IPR001135"
/db_xref="InterPro:IPR014029"
/db_xref="InterPro:IPR022885"
/db_xref="GeneID:10584475"
/translation="MDTLQTTPPGAQEEKQYNTLNLGPTHPATHGIFQNVLQMDGEFI
VSGEATIGYIHRAFEKLAEHRPYYQITPITDRLNYCSSPINNIGWHLTVEKLLGVQTP
KRVDYMRVMIMELARITDHLICNSVIGVDTGALTGFVYVFQQREHVYEIYEQICGSRL
TTNIGRIGGFERDFDDNVMRRIRKFLDEFPKVWKEFEGLLARNRIFMDRTIGVGGIDA
MEALDYGFTGPNLRAAGIDYDVRVMNPYSSYQDFDFTIPIGQSGDVYDRFCVRNEEIW
QSLSILEQAYAKLMAMPQGEYFAPVPEFYLPPKQDVYTKMEALIWHFKIVMGEVEIPK
GEVYHAVEGGNGELGFYLISDGGRQPYRLHFRRPCFIYYQAYPEMIKGSMLSDAILTM
SSMNVIAGELDA"
misc_feature 407031..408185
/locus_tag="Halhy_0319"
/note="Nickel-dependent hydrogenase; Region: NiFeSe_Hases;
cl00417"
/db_xref="CDD:207039"
misc_feature 407367..408185
/locus_tag="Halhy_0319"
/note="Respiratory-chain NADH dehydrogenase, 49 Kd
subunit; Region: Complex1_49kDa; pfam00346"
/db_xref="CDD:144077"
gene 408279..408788
/locus_tag="Halhy_0320"
/db_xref="GeneID:10584476"
CDS 408279..408788
/locus_tag="Halhy_0320"
/note="COGs: COG1905 NADH:ubiquinone oxidoreductase 24 kD
subunit;
InterPro IPR002023;
KEGG: ran:Riean_0719 NADH dehydrogenase subunit E;
PFAM: NADH:ubiquinone oxidoreductase, 24kDa subunit;
PRIAM: NADH dehydrogenase (quinone);
SPTR: NADH dehydrogenase subunit E;
TIGRFAM: NADH:ubiquinone oxidoreductase, 24kDa subunit;
IMG reference gene:2504769675;
PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit;
TIGRFAM: NADH-quinone oxidoreductase, E subunit"
/codon_start=1
/transl_table=11
/product="NADH-quinone oxidoreductase subunit E"
/protein_id="YP_004445105.1"
/db_xref="GI:332662317"
/db_xref="InterPro:IPR002023"
/db_xref="InterPro:IPR012335"
/db_xref="InterPro:IPR012336"
/db_xref="GeneID:10584476"
/translation="MIETTNITFSPERLAEVQTLLKRYPEGKQKSAILPILHLAQKDF
GWISVEVMDYVAELLDIQHIEVYEVATFYTMFHLKPVGKNVLEVCRTGPCMLVGSDNI
VKYLEQKLSIQDGETTPDGLFTIKTVECLGACGYGPMMQVGEKYHEFLSEERIDQLLE
GFRQNATQP"
misc_feature 408327..408767
/locus_tag="Halhy_0320"
/note="Respiratory-chain NADH dehydrogenase 24 Kd subunit;
Region: Complex1_24kDa; pfam01257"
/db_xref="CDD:144740"
misc_feature 408525..408764
/locus_tag="Halhy_0320"
/note="TRX-like [2Fe-2S] Ferredoxin (Fd) family,
NADH:ubiquinone oxidoreductase (Nuo) subunit E subfamily;
Nuo, also called respiratory chain Complex 1, is the entry
point for electrons into the respiratory chains of
bacteria and the mitochondria of eukaryotes; Region:
TRX_Fd_NuoE; cd03064"
/db_xref="CDD:48613"
misc_feature order(408531..408533,408537..408539,408657..408665)
/locus_tag="Halhy_0320"
/note="putative dimer interface [polypeptide binding];
other site"
/db_xref="CDD:48613"
misc_feature order(408543..408545,408558..408560,408666..408668,
408678..408680)
/locus_tag="Halhy_0320"
/note="[2Fe-2S] cluster binding site [ion binding]; other
site"
/db_xref="CDD:48613"
gene 408785..410143
/locus_tag="Halhy_0321"
/db_xref="GeneID:10584477"
CDS 408785..410143
/locus_tag="Halhy_0321"
/note="COGs: COG1894 NADH:ubiquinone oxidoreductase
NADH-binding (51 kD) subunit;
InterPro IPR011537:IPR011538:IPR019554:IPR019575;
KEGG: phe:Phep_4077 NADH-quinone oxidoreductase, F
subunit;
PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit;
Soluble ligand binding domain; NADH ubiquinone
oxidoreductase, F subunit, iron sulphur binding;
PRIAM: NADH dehydrogenase (quinone);
SPTR: NADH dehydrogenase subunit F;
TIGRFAM: NADH ubiquinone oxidoreductase, F subunit;
IMG reference gene:2504769676;
PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding
region; Respiratory-chain NADH dehydrogenase 51 Kd
subunit; SLBB domain;
TIGRFAM: NADH-quinone oxidoreductase, F subunit"
/codon_start=1
/transl_table=11
/product="NADH-quinone oxidoreductase subunit F"
/protein_id="YP_004445106.1"
/db_xref="GI:332662318"
/db_xref="InterPro:IPR001949"
/db_xref="InterPro:IPR011538"
/db_xref="InterPro:IPR019554"
/db_xref="InterPro:IPR019575"
/db_xref="GeneID:10584477"
/translation="MSRLKILTEHIDKPEITGIEGYIKHGGYRAVEKALKKMQPDEVT
EEVKKSGLRGRGGAGFPTGMKWSFIFKGNDKPRYLLCNADESEPGTFKDRLLMEKIPH
LLIEGMIASSFALGVKTAYIYIRGEYMYILHILQKAIDEAYAKGYLGENILGTTYSLD
LHVHPGGGAYICGEETALIESLEGKRGNPRIKPPFPAVEGLWGCPTIVNNVETICKVP
FIINEGGETYANIGIGASTGTKLISACGNINKPGVYEIELGVPVEEFIYSDEYCGGIK
GGKQLKALVPGGSSVPILPNRLITKTAKGEPRLMSYESLSDGGFPTGSMLGSGGFIVF
DEDQCIVRNTWNFSRFYHHESCGQCSPCREGTGWMEKILHRMEYGHGRMEDIDLLWDV
QRKIEGNTICPFGDASAWPVAAAIRHFRDEFEWHVLHPAEATRRNYGMGRSAEPIEQV
TA"
misc_feature 408803..410065
/locus_tag="Halhy_0321"
/note="NADH-quinone oxidoreductase, F subunit; Region:
nuoF_fam; TIGR01959"
/db_xref="CDD:131014"
misc_feature 409505..409666
/locus_tag="Halhy_0321"
/note="SLBB domain; Region: SLBB; pfam10531"
/db_xref="CDD:204505"
misc_feature 409805..409942
/locus_tag="Halhy_0321"
/note="NADH-ubiquinone oxidoreductase-F iron-sulfur
binding region; Region: NADH_4Fe-4S; smart00928"
/db_xref="CDD:197996"
gene 410310..411260
/locus_tag="Halhy_0322"
/db_xref="GeneID:10584478"
CDS 410310..411260
/locus_tag="Halhy_0322"
/note="COGs: COG1034 NADH dehydrogenase/NADH:ubiquinone
oxidoreductase 75 kD subunit (chain G);
InterPro IPR001041:IPR019574;
KEGG: chu:CHU_1376 NADH dehydrogenase I chain G;
PFAM: NADH:ubiquinone oxidoreductase, subunit G,
iron-sulphur binding; Ferredoxin;
PRIAM: NADH dehydrogenase (quinone);
SPTR: NADH dehydrogenase subunit G;
IMG reference gene:2504769677;
PFAM: 2Fe-2S iron-sulfur cluster binding domain;
NADH-ubiquinone oxidoreductase-G iron-sulfur binding
region"
/codon_start=1
/transl_table=11
/product="NADH dehydrogenase (quinone)"
/protein_id="YP_004445107.1"
/db_xref="GI:332662319"
/db_xref="InterPro:IPR001041"
/db_xref="InterPro:IPR012675"
/db_xref="InterPro:IPR019574"
/db_xref="GeneID:10584478"
/translation="MPKVTIDNITIDVPPGTTILNAARMIGENVPPAMCYYSKLKGSG
GKCRVCLVKVTKTSEQNPRGMPKLVASCVTQIADGMVVENITSPEVVEARKGVVELLL
INHPLDCPVCDQAGECHLQDLSYEHGAATTRYDFGRRTFNKIDIGPYIQLHMTRCILC
YRCVYTADQLTDGRVHGIINRGDAAEISTYIENIIDNDFSGNVIDVCPVGALTDRTFR
FKSRVWFTKPMNAHRNCDKCSGKVTLWFQGEEVLRVTGRKDQYGEVEEFICNTCRFET
KKKSDWVVEGHRRIDTHSVIAQNHLPYELDVVHPQIEQAQ"
misc_feature 410328..410558
/locus_tag="Halhy_0322"
/note="2Fe-2S iron-sulfur cluster binding domain.
Iron-sulfur proteins play an important role in electron
transfer processes and in various enzymatic reactions. The
family includes plant and algal ferredoxins, which act as
electron carriers in photosynthesis...; Region: fer2;
cd00207"
/db_xref="CDD:29262"
misc_feature order(410397..410399,410403..410405,410412..410414,
410442..410444,410448..410459,410520..410525)
/locus_tag="Halhy_0322"
/note="catalytic loop [active]"
/db_xref="CDD:29262"
misc_feature order(410412..410414,410448..410450,410457..410459,
410523..410525)
/locus_tag="Halhy_0322"
/note="iron binding site [ion binding]; other site"
/db_xref="CDD:29262"
misc_feature 410589..410711
/locus_tag="Halhy_0322"
/note="NADH-ubiquinone oxidoreductase-G iron-sulfur
binding region; Region: NADH-G_4Fe-4S_3; pfam10588"
/db_xref="CDD:204520"
gene 411257..412273
/locus_tag="Halhy_0323"
/db_xref="GeneID:10584479"
CDS 411257..412273
/locus_tag="Halhy_0323"
/note="COGs: COG1005 NADH:ubiquinone oxidoreductase
subunit 1 (chain H);
HAMAP: NAD(P)H-quinone oxidoreductase subunit 1;
InterPro IPR001694;
KEGG: chu:CHU_1375 NADH dehydrogenase I chain H;
PFAM: NADH:ubiquinone oxidoreductase, subunit 1;
PRIAM: NADH dehydrogenase (quinone);
SPTR: NADH dehydrogenase subunit H;
IMG reference gene:2504769678;
PFAM: NADH dehydrogenase"
/codon_start=1
/transl_table=11
/product="NAD(P)H-quinone oxidoreductase subunit 1"
/protein_id="YP_004445108.1"
/db_xref="GI:332662320"
/db_xref="InterPro:IPR001694"
/db_xref="InterPro:IPR018086"
/db_xref="GeneID:10584479"
/translation="MILLSILLFKTGLAFTLFLITLGIAAYSTYFERKVAAFMQDRVG
PNRAGPLGLLQPIADGVKMIFKEEHRPTGSNRILFILGPSIAMLTALMTTAVVPWGKT
ITIGGTAYSLQVADINVGILYVFGVVSLGVYGILIGGWSSNNKYSLLGAVRASSQMIS
YELAMGLSIIPIILGSSSLQLSDIVTSQYEVWNIFKYPLGFLIFLICAFAETNRTPFD
LPECETELVGGYHTEYTSMKLGFFLFSEYVNMFASSAVISTLFFGGYHFPGMSLFPEG
IAAILGIAVLFGKIIFFIFFFMWIRWTIPRFRYDQLMHLGWQVLMPMAILLIVIYGAI
FSFI"
misc_feature 411269..412258
/locus_tag="Halhy_0323"
/note="NADH:ubiquinone oxidoreductase subunit H;
Provisional; Region: PRK06076"
/db_xref="CDD:180386"
gene 412289..412819
/locus_tag="Halhy_0324"
/db_xref="GeneID:10584480"
CDS 412289..412819
/locus_tag="Halhy_0324"
/note="COGs: COG1143 Formate hydrogenlyase subunit
6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I);
HAMAP: NADH-quinone oxidoreductase, chain I;
InterPro IPR010226:IPR001450;
KEGG: chu:CHU_1374 NADH dehydrogenase I chain I;
PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup;
PRIAM: NADH dehydrogenase (quinone);
SPTR: NADH-quinone oxidoreductase subunit I;
TIGRFAM: NADH-quinone oxidoreductase, chain I;
IMG reference gene:2504769679;
PFAM: 4Fe-4S binding domain;
TIGRFAM: NADH-quinone oxidoreductase, chain I"
/codon_start=1
/transl_table=11
/product="NAD(P)H-quinone oxidoreductase subunit I"
/protein_id="YP_004445109.1"
/db_xref="GI:332662321"
/db_xref="InterPro:IPR001450"
/db_xref="InterPro:IPR010226"
/db_xref="InterPro:IPR012285"
/db_xref="InterPro:IPR017896"
/db_xref="InterPro:IPR017900"
/db_xref="GeneID:10584480"
/translation="MQLTNRSKQVSNKEMTFSERMYLPAIAGGLRVTFSHMFKKSATV
QYPEQVREHSAVFRGQHVLKRDAEGRENCTACGLCAVACPAEAITIVAEERKKGEEHL
YREEKYAAVYDINMLRCIFCGLCEEACPKDAIYLTDRIVTSNYERADFIFHKEDLVEA
VALEGRIDITKRKKDK"
misc_feature 412373..412759
/locus_tag="Halhy_0324"
/note="NADH-quinone oxidoreductase, chain I; Region: NuoI;
TIGR01971"
/db_xref="CDD:162631"
misc_feature <412499..412555
/locus_tag="Halhy_0324"
/note="4Fe-4S binding domain; Region: Fer4; pfam00037"
/db_xref="CDD:200947"
misc_feature 412622..412693
/locus_tag="Halhy_0324"
/note="4Fe-4S binding domain; Region: Fer4; pfam00037"
/db_xref="CDD:200947"
gene 412823..413320
/locus_tag="Halhy_0325"
/db_xref="GeneID:10584481"
CDS 412823..413320
/locus_tag="Halhy_0325"
/note="COGs: COG0839 NADH:ubiquinone oxidoreductase
subunit 6 (chain J);
InterPro IPR001457;
KEGG: cpi:Cpin_7010 NADH-ubiquinone/plastoquinone
oxidoreductase chain 6;
PFAM: NADH:ubiquinone/plastoquinone oxidoreductase, chain
6;
SPTR: NADH-ubiquinone/plastoquinone oxidoreductase chain
6;
IMG reference gene:2504769680;
PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain
6"
/codon_start=1
/transl_table=11
/product="NADH-ubiquinone/plastoquinone oxidoreductase
chain 6"
/protein_id="YP_004445110.1"
/db_xref="GI:332662322"
/db_xref="InterPro:IPR001457"
/db_xref="GeneID:10584481"
/translation="MDQVIFYILSTIAIIGALSTVVSRNAMYSVLSLVVTFFALAGIY
LQLNAEFVAIVHIIVYAGAIMVLFLFVVMMLNLNTVTVTIRKNPLIKYLAVLVGIIMA
ALLGFASMNTALPIARGNTSAEVGTVKVLGKMLFNEYLLPFELISVLLIATMVGVIVL
TKKEE"
misc_feature 412823..413317
/locus_tag="Halhy_0325"
/note="NADH:ubiquinone oxidoreductase subunit 6 (chain J)
[Energy production and conversion]; Region: NuoJ; COG0839"
/db_xref="CDD:31181"
misc_feature 412832..>413014
/locus_tag="Halhy_0325"
/note="NADH dehydrogenase subunit J; Provisional; Region:
PRK06433; cl14634"
/db_xref="CDD:199474"
gene 413324..413644
/locus_tag="Halhy_0326"
/db_xref="GeneID:10584482"
CDS 413324..413644
/locus_tag="Halhy_0326"
/note="COGs: COG0713 NADH:ubiquinone oxidoreductase
subunit 11 or 4L (chain K);
HAMAP: NAD(P)H-quinone oxidoreductase subunit 4L;
InterPro IPR001133;
KEGG: sli:Slin_5943 NADH-ubiquinone oxidoreductase chain
4L;
PFAM: NADH:ubiquinone/quinone oxidoreductase, chain 4L;
SPTR: NADH dehydrogenase subunit K;
IMG reference gene:2504769681;
PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain
4L"
/codon_start=1
/transl_table=11
/product="NAD(P)H-quinone oxidoreductase subunit 4L"
/protein_id="YP_004445111.1"
/db_xref="GI:332662323"
/db_xref="InterPro:IPR001133"
/db_xref="GeneID:10584482"
/translation="MESIFDVIPLEHFVLLSLLLFCIGMAGVLLRRNMIIVFMSIELM
LNAVNLLAVAFSSYRGDPGGQVFVFFVMVVAAAEVALGLGILVMIYRNVKSVDINALQ
QLKW"
misc_feature 413345..413641
/locus_tag="Halhy_0326"
/note="NADH:ubiquinone oxidoreductase subunit K;
Validated; Region: PRK05715"
/db_xref="CDD:180218"
gene 413739..415634
/locus_tag="Halhy_0327"
/db_xref="GeneID:10584483"
CDS 413739..415634
/locus_tag="Halhy_0327"
/note="COGs: COG1009 NADH:ubiquinone oxidoreductase
subunit 5 (chain L)/Multisubunit Na+/H+ antiporter MnhA
subunit;
InterPro IPR003945:IPR001516:IPR001750;
KEGG: phe:Phep_4071 proton-translocating NADH-quinone
oxidoreductase, chain L;
PFAM: NADH:ubiquinone/plastoquinone oxidoreductase;
NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal;
PRIAM: NADH dehydrogenase (quinone);
SPTR: NADH dehydrogenase subunit L;
TIGRFAM: NADH-plastoquinone oxidoreductase, chain 5;
IMG reference gene:2504769682;
PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5
N-terminus; NADH-Ubiquinone/plastoquinone (complex I),
various chains;
TIGRFAM: proton-translocating NADH-quinone oxidoreductase,
chain L"
/codon_start=1
/transl_table=11
/product="proton-translocating NADH-quinone oxidoreductase
subunit L"
/protein_id="YP_004445112.1"
/db_xref="GI:332662324"
/db_xref="InterPro:IPR001516"
/db_xref="InterPro:IPR001750"
/db_xref="InterPro:IPR018393"
/db_xref="GeneID:10584483"
/translation="MENLIWLIPILPLLGFFILGLGASKLPKGAAGVIGCASVMIAFA
LSIGLAGTVFTNGGLEQNLFTWVSSGTWSVDFGFLVDPLSLIMMLVITGVGSLIHIYS
TGYMHDDERHNYFFAYLNLFIFFMLLLVMSNNYLLLFAGWEGVGLCSYLLIGFWFKVD
EYNEAAKKAFVMNRIGDLGFLLGLFLILVYFGTLNYDGVFDSEKLSQMPVGVLTAITL
LFIVGAAGKSAQIPLYTWLPDAMAGPTPVSALIHAATMVTAGIYLTIRSHALFDLAPI
SMQVLTYVGLATSIFAATIGLKQNDIKKVLAYSTVSQLGLMFFALGLGAYVAAFFHLV
THAFFKALLFLGAGSVIHGLGGEQDIRKMGALRKILPITFIVFLIGTLAIAGIPPFAG
FVSKDQILLAAYEKSPILFAMGVFASLLTVFYMFRMFFLVFYGQNRVDHDTLHHAHES
PAAMTVPLGILALLSVVGGFLNWPALMGGGDWLQHTLSGVLGVEEGHEHHHAISPSTE
WLLMGIVVALVVGVIGLAYSLYVQRNTVPVADEQEEGFGRVLNRKYFVDELYSTLFVK
PAQTLSEWFGRIVDPKILDGAINGIGQSILSLGSVLKNIQQGAVGLYLFVFAVGIVIL
LALQILL"
misc_feature 413811..415619
/locus_tag="Halhy_0327"
/note="NADH:ubiquinone oxidoreductase subunit L; Reviewed;
Region: PRK06590"
/db_xref="CDD:180633"
misc_feature 413919..414101
/locus_tag="Halhy_0327"
/note="NADH-Ubiquinone oxidoreductase (complex I), chain 5
N-terminus; Region: Oxidored_q1_N; pfam00662"
/db_xref="CDD:109709"
misc_feature 414153..414947
/locus_tag="Halhy_0327"
/note="NADH-Ubiquinone/plastoquinone (complex I), various
chains; Region: Oxidored_q1; pfam00361"
/db_xref="CDD:201180"
gene 415646..417082
/locus_tag="Halhy_0328"
/db_xref="GeneID:10584484"
CDS 415646..417082
/locus_tag="Halhy_0328"
/note="COGs: COG1008 NADH:ubiquinone oxidoreductase
subunit 4 (chain M);
InterPro IPR010227:IPR001750;
KEGG: chu:CHU_1370 NADH dehydrogenase I chain M;
PFAM: NADH:ubiquinone/plastoquinone oxidoreductase;
PRIAM: NADH dehydrogenase (quinone);
SPTR: NADH-quinone oxidoreductase subunit M;
TIGRFAM: NADH-quinone oxidoreductase, chain M;
IMG reference gene:2504769683;
PFAM: NADH-Ubiquinone/plastoquinone (complex I), various
chains;
TIGRFAM: proton-translocating NADH-quinone oxidoreductase,
chain M"
/codon_start=1
/transl_table=11
/product="proton-translocating NADH-quinone oxidoreductase
subunit M"
/protein_id="YP_004445113.1"
/db_xref="GI:332662325"
/db_xref="InterPro:IPR001750"
/db_xref="InterPro:IPR003918"
/db_xref="GeneID:10584484"
/translation="MLTTFLLFSPIIGGFILTLFPGSSATRWQALFISAVTAALSVYM
AWSFVPTGGIQFEMNLAWLPSLGIGYHVGADGISMVLLLLTNLLSPLILLSTFKQKNE
SEGLYYGLMLMMQGAMTGVFVALDLFLYYIFWELALIPAYFLVLLWGSGQHRKTALKF
FIYTLLGSLLMLVAIIFLSQQWSPASFDISNVHSVSLSPEAETFVLLAFMLAYAIKIP
LFPFHTWQPDTYTQAPTAGTMLLSGIMLKMGLYSIIRWVLPVAPNALMEHRTWMIWLI
VIGIAYASIIAIQQKDLKRLFAYSSIAHVGLIAAGILTMSTEGLMGSMLQMVAHGINA
VGLFYICAILMERTQTNEIAALGGIRNIAPWFATTYFVVLLGSVALPLTNGFPGEFML
LSSLFQLNWGWSLVAGSGVILGAVYMFKSYQGVMLGETKVSSFSDLDNWDKAILIPIV
IAIVLMGILPNVITRIAQPSIEQLLQSL"
misc_feature 415646..417073
/locus_tag="Halhy_0328"
/note="NADH:ubiquinone oxidoreductase subunit M; Reviewed;
Region: PRK05846"
/db_xref="CDD:180285"
misc_feature 416015..416833
/locus_tag="Halhy_0328"
/note="NADH-Ubiquinone/plastoquinone (complex I), various
chains; Region: Oxidored_q1; pfam00361"
/db_xref="CDD:201180"
gene 417121..418500
/locus_tag="Halhy_0329"
/db_xref="GeneID:10584485"
CDS 417121..418500
/locus_tag="Halhy_0329"
/note="COGs: COG1007 NADH:ubiquinone oxidoreductase
subunit 2 (chain N);
HAMAP: NAD(P)H-quinone oxidoreductase subunit 2;
InterPro IPR010096:IPR001750;
KEGG: phe:Phep_4069 proton-translocating NADH-quinone
oxidoreductase, chain N;
PFAM: NADH:ubiquinone/plastoquinone oxidoreductase;
PRIAM: NADH dehydrogenase (quinone);
SPTR: NADH dehydrogenase subunit N;
TIGRFAM: NADH-quinone oxidoreductase, chain N;
IMG reference gene:2504769684;
PFAM: NADH-Ubiquinone/plastoquinone (complex I), various
chains;
TIGRFAM: proton-translocating NADH-quinone oxidoreductase,
chain N"
/codon_start=1
/transl_table=11
/product="NAD(P)H-quinone oxidoreductase subunit 2"
/protein_id="YP_004445114.1"
/db_xref="GI:332662326"
/db_xref="InterPro:IPR001750"
/db_xref="InterPro:IPR010096"
/db_xref="GeneID:10584485"
/translation="MYPIIILSIAGILSMFVGAFKLKKVALPAVLIATLAGFIANLLP
ENLQDAPVFSGMLKFDSFAVNFSAVLIGITLVILILSRRYYRQTTEHLGDIYALFLFS
VVGAMIMVGSYNLVMFFVGLEILSIPLYILATSEKNNLLSNEAGLKYFLMGSFISVFL
LLGMVLMYGITGSFDFGTISTYLSSTTEVPVLVKLGIMLIMIAFIFKISAAPFHFWAP
DVYQGSPAVIMVFMATVAKTAAFGGFLRFLTQAIYPIEDIFTPLLAVLSALTMCVGNL
MALHQTNLKRMLAFSSIANAGYVMLALVGLGANSTSTILYYMLVYSIANVITIAVYLT
VKESMGSGSIDGLKGLYQTKPLLTFCLVLAMLSLAGIPPLAGFIGKYALFVDALRNGY
AWLVILAALNSAVGIFYYFRVMRTAFVASEEGPITVPYVLGYSTVLVICTLVLLVLGI
FPNLILNSL"
misc_feature 417121..418488
/locus_tag="Halhy_0329"
/note="proton-translocating NADH-quinone oxidoreductase,
chain N; Region: NDH_I_N; TIGR01770"
/db_xref="CDD:200130"
misc_feature 417454..418272
/locus_tag="Halhy_0329"
/note="NADH-Ubiquinone/plastoquinone (complex I), various
chains; Region: Oxidored_q1; pfam00361"
/db_xref="CDD:201180"
gene 418852..419688
/locus_tag="Halhy_0330"
/db_xref="GeneID:10584486"
CDS 418852..419688
/locus_tag="Halhy_0330"
/note="COGs: COG0811 Biopolymer transport protein;
InterPro IPR002898;
KEGG: phe:Phep_4090 MotA/TolQ/ExbB proton channel;
PFAM: MotA/TolQ/ExbB proton channel;
SPTR: Outer membrane transport energization protein ExbB;
IMG reference gene:2504769685;
PFAM: MotA/TolQ/ExbB proton channel family"
/codon_start=1
/transl_table=11
/product="MotA/TolQ/ExbB proton channel"
/protein_id="YP_004445115.1"
/db_xref="GI:332662327"
/db_xref="InterPro:IPR002898"
/db_xref="GeneID:10584486"
/translation="MSKSTKPAAKAAKAESGQFSRIFAYLLIPILLVVAILIFNYVLG
SPSNFENGDPKGHPLPNNYFGMMYKGGTMVPILMANFLLVIAVFIERIFTITAASGKG
SIPNFVKKVQSFLSGDNVASAIAECDKQRGSVANVVKAGLEKYQEMAVTTEALDREQK
VLAITKEIEEATSLEMPMLERNLVILATISSIATLLGLLGTVIGMIKAFSALATAGAP
DAVALSSGISEALINTALGIGTSAFAIIFYNFFTTRIDGMTYAIDEAGFSIAQNFASK
HK"
misc_feature 419059..419682
/locus_tag="Halhy_0330"
/note="Biopolymer transport proteins [Intracellular
trafficking and secretion]; Region: TolQ; COG0811"
/db_xref="CDD:31153"
gene 419775..420437
/locus_tag="Halhy_0331"
/db_xref="GeneID:10584487"
CDS 419775..420437
/locus_tag="Halhy_0331"
/note="InterPro IPR003400;
KEGG: phe:Phep_4089 biopolymer transport protein
ExbD/TolR;
PFAM: Biopolymer transport protein ExbD/TolR;
SPTR: Outer membrane transport energization protein ExbD;
IMG reference gene:2504769686;
PFAM: Biopolymer transport protein ExbD/TolR"
/codon_start=1
/transl_table=11
/product="biopolymer transport protein ExbD/TolR"
/protein_id="YP_004445116.1"
/db_xref="GI:332662328"
/db_xref="InterPro:IPR003400"
/db_xref="GeneID:10584487"
/translation="MAKIKVARKSTFIDMTAMCDVAFLLLTFFILTTKFRPSEVAEIN
IPASTAQISVPDRNILLIQVNKEGQVFMGVDDQNTRLRLLEKLKERYNLSMTAEQTNS
FRLLDAFGVEMSQLPSLLSMSNDARARTKQPGISLEVVPPKQSEFMDLVQLIRQSNEE
IRVAEGRPTSEIMRIAIKADKDADYEAVNEVIAQLQQKKVNKFNLITSARGAGDSGAA
KE"
misc_feature 419811..>419993
/locus_tag="Halhy_0331"
/note="Biopolymer transport protein ExbD/TolR; Region:
ExbD; pfam02472"
/db_xref="CDD:190319"
misc_feature <420177..420395
/locus_tag="Halhy_0331"
/note="Biopolymer transport protein ExbD/TolR; Region:
ExbD; cl00537"
/db_xref="CDD:193858"
gene 420480..421070
/locus_tag="Halhy_0332"
/db_xref="GeneID:10584488"
CDS 420480..421070
/locus_tag="Halhy_0332"
/note="InterPro IPR003400;
KEGG: fps:FP2208 biopolymer transport ExbD protein;
PFAM: Biopolymer transport protein ExbD/TolR;
SPTR: Biopolymer transport ExbD protein;
IMG reference gene:2504769687;
PFAM: Biopolymer transport protein ExbD/TolR"
/codon_start=1
/transl_table=11
/product="biopolymer transport protein ExbD/TolR"
/protein_id="YP_004445117.1"
/db_xref="GI:332662329"
/db_xref="InterPro:IPR003400"
/db_xref="GeneID:10584488"
/translation="MAEMNIPDKGGKGGKKSRSKKQSTRVDLTAMVDLGFLLITFFML
ATTFSKPKAMEVNKPAKEDDQEVEEAPIKQSKTYAIVLGKRDMVYCYVGADDATGVKV
DSVTFSRTGLRSMIKDRQNAVQQQWGDKDELFVMIKPLPESKYRNMVDVLDEMAITGV
KRYAIIDDFNSIDSLIATGSGNRLRPIKGFNSLKLK"
misc_feature 420543..420974
/locus_tag="Halhy_0332"
/note="Biopolymer transport protein ExbD/TolR; Region:
ExbD; pfam02472"
/db_xref="CDD:190319"
gene 421090..421953
/locus_tag="Halhy_0333"
/db_xref="GeneID:10584489"
CDS 421090..421953
/locus_tag="Halhy_0333"
/note="COGs: COG0810 Periplasmic protein TonB links inner
and outer membranes;
InterPro IPR006260:IPR003538;
KEGG: dfe:Dfer_4058 TonB family protein;
PFAM: Gram-negative bacterial tonB protein;
SPTR: TonB family protein;
TIGRFAM: TonB, C-terminal;
IMG reference gene:2504769688;
PFAM: Gram-negative bacterial tonB protein;
TIGRFAM: TonB family C-terminal domain"
/codon_start=1
/transl_table=11
/product="TonB family protein"
/protein_id="YP_004445118.1"
/db_xref="GI:332662330"
/db_xref="InterPro:IPR003538"
/db_xref="InterPro:IPR006260"
/db_xref="GeneID:10584489"
/translation="MNTNDASKSGLLVGDIMKADLDDLIFQYRNKEYGAYQLRKAYYK
RMTRATILAVLLMAFVALLPSILSAIRNSVADDETLNVEVTLSEPPSVDPKQEPPPPP
PPVEPPPARPTIAFTIPVVKKDEEVVEEVPPPTQEEMKEVEISTKTQEGSDDGVVAGL
GDEPIEEAPPEIVKEVEPPKPTQEVFKVVEQMPSFPDGQAALLRFLAQNIEYPTIAKE
NGVEGMVVVQFVVERDGSIAAANVVKGIGAGCDEEALRVVRMMPKWQPGKQRGQPVRV
QFNLPIRFKLE"
misc_feature 421714..421947
/locus_tag="Halhy_0333"
/note="Gram-negative bacterial tonB protein; Region: TonB;
pfam03544"
/db_xref="CDD:202680"
gene 422056..422253
/locus_tag="Halhy_0334"
/db_xref="GeneID:10584490"
CDS 422056..422253
/locus_tag="Halhy_0334"
/note="IMG reference gene:2504769689"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004445119.1"
/db_xref="GI:332662331"
/db_xref="GeneID:10584490"
/translation="MNLLRLAFFSLFGIAYILAGVFVLKIKPISPVSVNTVLGVLFLA
YGVFRIARQFFASKPTEEIED"
gene 422288..423235
/locus_tag="Halhy_0335"
/db_xref="GeneID:10584491"
CDS 422288..423235
/locus_tag="Halhy_0335"
/note="COGs: COG0226 ABC-type phosphate transport system
periplasmic component;
KEGG: bth:BT_2664 phosphate ABC transporter,
phosphate-binding component;
SPTR: uncharacterized protein;
IMG reference gene:2504769690"
/codon_start=1
/transl_table=11
/product="phosphate ABC transporter substrate-binding
protein"
/protein_id="YP_004445120.1"
/db_xref="GI:332662332"
/db_xref="GeneID:10584491"
/translation="MRWFAISLLVLWVASGCSNSASTSEDGATFGKTRILADEALFPI
VVAGEDMFEHTYKRASIDFKYLPGIQALNEFLKDTARTLVSTRPLSAEETAYLKKINS
TPFTTQIATDAVAFMVHPSNPDTALTCEEILKVLKGEVTSWDQVSPNNRTGNITLVFD
NQNSSTVQYVMDLIKLKKLPANAYALKNNPSVVEYVAQHPGALGIIGYSWISDYDDPL
GKKLRSEAKLMAVSVCEGENAGKPYKPYAANMLDNLYPFRREVYIISREGRSGLGTGF
ASYMASDIGQRIIQKAGIPPYYKLEYNIELSSKPFKLEK"
misc_feature 422351..423136
/locus_tag="Halhy_0335"
/note="PBP superfamily domain; Region: PBP_like_2;
pfam12849"
/db_xref="CDD:205106"
gene 423272..424915
/locus_tag="Halhy_0336"
/db_xref="GeneID:10584492"
CDS 423272..424915
/locus_tag="Halhy_0336"
/note="InterPro IPR001440:IPR019734;
KEGG: chu:CHU_2012 TPR repeat-containing protein;
PFAM: Tetratricopeptide TPR-1;
SPTR: TPR repeat-containing protein;
IMG reference gene:2504769691"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004445121.1"
/db_xref="GI:332662333"
/db_xref="InterPro:IPR011990"
/db_xref="InterPro:IPR013026"
/db_xref="InterPro:IPR019734"
/db_xref="GeneID:10584492"
/translation="MKKLVLWSVFILVSQGVFAQTVAEIQKMMSDENISGARKMAREL
IKKDPTNGDGYYYLGETFYFDEAQDSAAFWYNKGLALAPDSPAPHVGVGKISLDKGLS
QDAEKSFGRALRFVKKKPAETYALIGSSYLSSQKANIDKALENFTLARDNDTKNPRYF
MLLGDALVAADKIGEAQTNYTFASEKDKENPEILMKIARTYLKSGINDVAQKNLEEIV
AKFPNYSPAYKDLYEIYFSNRLYTKGTPLLSKYVELVGTDIDARSRLVRFLTYNAKDY
ERAVKEALTVLQQDPARGEMYRWLAWAYYEKGAAMTNKEEAKTIFQESLNSSKLFFEK
ETARKKYTSDYEYYAKAAARLEEMDVAAANYMKVLELDSARTEVYDLIGKMYYNAKDY
QKAVDAYTIKIQKVEPTNQDYFYIGNAYMVLKNYALADSAYRKVNELNPTYAAGWYTR
ARINTALDTSEKKSMAKPFYEKFLELTEPTLAQADQRVKTNVISAYAYLGEYYALMID
PADYPKALSFFEKIAVLDPANASVQETITNIKKAMEGKN"
misc_feature 423341..423613
/locus_tag="Halhy_0336"
/note="Tetratricopeptide repeat domain; typically contains
34 amino acids
[WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
a variety of organisms including bacteria, cyanobacteria,
yeast, fungi; Region: TPR; cl02429"
/db_xref="CDD:207591"
misc_feature order(423344..423346,423380..423382,423392..423394,
423401..423403,423446..423448,423482..423484,
423494..423496,423503..423505,423548..423550,
423584..423586,423596..423598,423605..423607)
/locus_tag="Halhy_0336"
/note="TPR motif; other site"
/db_xref="CDD:29151"
misc_feature order(423347..423352,423437..423442,423446..423451,
423458..423463,423539..423544,423551..423556,
423563..423568)
/locus_tag="Halhy_0336"
/note="binding surface"
/db_xref="CDD:29151"
misc_feature 423674..423940
/locus_tag="Halhy_0336"
/note="Tetratricopeptide repeat domain; typically contains
34 amino acids
[WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
a variety of organisms including bacteria, cyanobacteria,
yeast, fungi; Region: TPR; cd00189"
/db_xref="CDD:29151"
misc_feature order(423695..423697,423707..423709,423716..423718,
423761..423763,423797..423799,423809..423811,
423818..423820,423863..423865,423899..423901,
423911..423913,423920..423922)
/locus_tag="Halhy_0336"
/note="TPR motif; other site"
/db_xref="CDD:29151"
misc_feature order(423752..423757,423761..423766,423773..423778,
423854..423859,423866..423871,423878..423883)
/locus_tag="Halhy_0336"
/note="binding surface"
/db_xref="CDD:29151"
misc_feature 424400..424708
/locus_tag="Halhy_0336"
/note="Tetratricopeptide repeat domain; typically contains
34 amino acids
[WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
a variety of organisms including bacteria, cyanobacteria,
yeast, fungi; Region: TPR; cd00189"
/db_xref="CDD:29151"
misc_feature order(424400..424405,424409..424414,424421..424426,
424511..424516,424520..424525,424532..424537,
424613..424618,424625..424630,424637..424642)
/locus_tag="Halhy_0336"
/note="binding surface"
/db_xref="CDD:29151"
misc_feature 424400..424594
/locus_tag="Halhy_0336"
/note="TPR repeat; Region: TPR_11; pfam13414"
/db_xref="CDD:205592"
misc_feature order(424418..424420,424454..424456,424466..424468,
424475..424477,424520..424522,424556..424558,
424568..424570,424577..424579,424622..424624,
424667..424669,424679..424681,424688..424690)
/locus_tag="Halhy_0336"
/note="TPR motif; other site"
/db_xref="CDD:29151"
gene complement(424993..427023)
/locus_tag="Halhy_0337"
/db_xref="GeneID:10584493"
CDS complement(424993..427023)
/locus_tag="Halhy_0337"
/note="COGs: COG0021 Transketolase;
InterPro IPR005474:IPR005475;
KEGG: fbc:FB2170_14593 transketolase;
PFAM: Transketolase, N-terminal; Transketolase-like,
pyrimidine-binding domain;
PRIAM: Transketolase;
SPTR: Transketolase;
IMG reference gene:2504769692;
PFAM: Transketolase, thiamine diphosphate binding domain;
Transketolase, pyrimidine binding domain"
/codon_start=1
/transl_table=11
/product="transketolase"
/protein_id="YP_004445122.1"
/db_xref="GI:332662334"
/db_xref="InterPro:IPR005474"
/db_xref="InterPro:IPR005475"
/db_xref="InterPro:IPR005478"
/db_xref="InterPro:IPR009014"
/db_xref="InterPro:IPR015941"
/db_xref="InterPro:IPR020826"
/db_xref="GeneID:10584493"
/translation="MANNLSLRAADNIRILSAAMVEKAQSGHPGGPMGGADFIHILYS
EFLNYDPNDMHWPLRDRFFLDAGHMSAMLYAQQTLLGNYSLEDIINFRQWGSPTPGHP
EVDVDRGIENTSGPLGLGHTFGIGSAIAERFLAQRFGEEVAHKTYIYISDGGVQEEIS
QGAGRIAGFLGLGNIVMFYDANDIQLSTEVSAVTSEDTAMKYEAWHWHVQTIVGNDHD
ALRAAIKSAIAETDRPSLIIGKTIMGKGVKKEDGSDYEGEVELHGKPLGQSKASFAKT
IEGLGGDSSNPFQIFPDVAEYYRTVLDQKRSSAAARKVKYAAWEKANPVQAEKLATWL
SGKLPEINWGEIAQKENDATRNASGNVLAYLAGRVENLIVASADLSNSDKTDSYLKKT
TAFTKGDFSGSFLQAGVAELTMAALATGMSLHGGIVPVCATFFAFSDYMKPAIRVAAL
MEKQVIFVWTHDAFRVGEDGPTHQPVEQEAQLRLLEQLKNHSGKNSVLALRPADVHET
TICWKLALENQHSPSGLILSRQNITDLPAASSRFAEATQAERGAYIVQNCAGTPDVIL
VANGSEVATLVAGAKKLSDEKGLKVRIVSAPSEGLFRNQTVDYQETVLPSNVPTFGLT
AGLPVTMRGLVGTRGRVWGLSHFGYSAPFKVLDEKFGFTAENVFQQVVSLLG"
misc_feature complement(424999..427002)
/locus_tag="Halhy_0337"
/note="transketolase; Reviewed; Region: PRK05899"
/db_xref="CDD:180309"
misc_feature complement(426199..426993)
/locus_tag="Halhy_0337"
/note="Thiamine pyrophosphate (TPP) family, Transketolase
(TK) subfamily, TPP-binding module; TK catalyzes the
transfer of a two-carbon unit from ketose phosphates to
aldose phosphates. In heterotrophic organisms, TK provides
a link between glycolysis and the...; Region: TPP_TK;
cd02012"
/db_xref="CDD:48175"
misc_feature complement(order(426238..426240,426466..426468,
426472..426474,426478..426480,426553..426555,
426565..426570,426673..426675,426679..426681,
426820..426822))
/locus_tag="Halhy_0337"
/note="TPP-binding site [chemical binding]; other site"
/db_xref="CDD:48175"
misc_feature complement(order(426421..426423,426466..426471,
426517..426519,426529..426531,426538..426543,
426550..426561,426667..426669,426673..426678,
426715..426717,426721..426726,426748..426750))
/locus_tag="Halhy_0337"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:48175"
misc_feature complement(425437..425958)
/locus_tag="Halhy_0337"
/note="Pyrimidine (PYR) binding domain of
1-deoxy-D-xylulose-5-phosphate synthase (DXS),
transketolase (TK), and related proteins; Region:
TPP_PYR_DXS_TK_like; cd07033"
/db_xref="CDD:132916"
misc_feature complement(order(425467..425469,425533..425538,
425608..425610,425617..425619,425692..425697,
425704..425706,425761..425769,425773..425778,
425785..425802,425806..425808,425815..425817,
425890..425892,425908..425910,425914..425916))
/locus_tag="Halhy_0337"
/note="PYR/PP interface [polypeptide binding]; other site"
/db_xref="CDD:132916"
misc_feature complement(order(425566..425568,425572..425577,
425581..425586,425611..425613,425617..425619,
425698..425700,425704..425709,425791..425799,
425806..425808,425890..425892))
/locus_tag="Halhy_0337"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:132916"
misc_feature complement(order(425704..425706,425713..425715,
425791..425793,425797..425799))
/locus_tag="Halhy_0337"
/note="TPP binding site [chemical binding]; other site"
/db_xref="CDD:132916"
gene complement(427130..427561)
/locus_tag="Halhy_0338"
/db_xref="GeneID:10584494"
CDS complement(427130..427561)
/locus_tag="Halhy_0338"
/note="KEGG: sli:Slin_4733 hypothetical protein;
SPTR: uncharacterized protein;
IMG reference gene:2504769693"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004445123.1"
/db_xref="GI:332662335"
/db_xref="GeneID:10584494"
/translation="MQQRRYALKAYHGIRIFLNQGNDSFKESKFIPLHGAGKVLVEDF
DQDGKLDLACSAYFPDYTQKPLAGFVLLTNQGNLNFSAHTFPQCDAANWLLMDKGDID
GDGDVDILLGACSINNTVPEPLRKDWNKKGIGVLLLRNQLK"
misc_feature complement(427403..>427531)
/locus_tag="Halhy_0338"
/note="Family description; Region: VCBS; pfam13517"
/db_xref="CDD:205695"
gene complement(427600..428580)
/locus_tag="Halhy_0339"
/db_xref="GeneID:10584495"
CDS complement(427600..428580)
/locus_tag="Halhy_0339"
/note="InterPro IPR002559;
KEGG: amr:AM1_3283 IS4 family transposase;
PFAM: Transposase, IS4-like;
SPTR: Transposase, IS4 family;
IMG reference gene:2504769694;
PFAM: Transposase DDE domain"
/codon_start=1
/transl_table=11
/product="transposase IS4 family protein"
/protein_id="YP_004445124.1"
/db_xref="GI:332662336"
/db_xref="InterPro:IPR002559"
/db_xref="GeneID:10584495"
/translation="MSKVTKADQGSNKPKQKYQIENWSSYNQSLVNRGNITLYISDAA
IKSWNETGPKARGGQYVYSDICIETIFMLKTVFKLAYRQATGFTQSLLVIMGCKELKV
PCYTQVSRRVKELDIQPMVIKTKGSITIAIDSTGIKVFGEGEWKVRKHGYSKRRTWRK
LHLGVDPQTGYIHCHTLTLNDIDDGSQLKDLIGQIKPKVKEGYLDGAYDHFECWETLI
KQQINPVIPPRADAVIWYAKEPGDSPYYPRNMAIERIHEVDRANWKKESNYHRRSLAE
TTMFRFKTIHGPSFFSRKFETQQKETNIKIKLLNIMTAQGMPVSKPKMTA"
misc_feature complement(428155..428490)
/locus_tag="Halhy_0339"
/note="Transposase DDE domain; Region: DDE_Tnp_1_5;
pfam13737"
/db_xref="CDD:205911"
misc_feature complement(427648..428208)
/locus_tag="Halhy_0339"
/note="Transposase DDE domain; Region: DDE_Tnp_1;
pfam01609"
/db_xref="CDD:201886"
gene complement(428641..429786)
/locus_tag="Halhy_0340"
/db_xref="GeneID:10584496"
CDS complement(428641..429786)
/locus_tag="Halhy_0340"
/note="KEGG: dfe:Dfer_4177 hypothetical protein;
SPTR: uncharacterized protein;
IMG reference gene:2504769695"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004445125.1"
/db_xref="GI:332662337"
/db_xref="GeneID:10584496"
/translation="MTKRAILNNLIFLLALGVVWGTSSCNPKEEDRKLAEMYCGSCHL
FPEPKLLSKDSWVNGVFPEMAIRMGYKNADPTLFDPDEYQRLVLNGVLPTHSMISEKH
WNRILEYYQDNAPLKSLPQQAPIQLQTNEEMFAPEVLWSSPGQSPNFSLLKVIPEQGA
LFAGQREGKIYVFPFGTLKPQDSLFVPSSPSDIQAVGQNQFQLLLMGKMDPNDWHNGS
LIEIKKENSNWKLLKQWVKELNRPVQFVFADLNADAQEDWVISQFGHYMGKLAWYEKG
KNGQIKEHELSKVPGVRIAQVIDLNQDGTKDIVALLTQGDERIVWFKNLGSGKFEEQE
LARFSPVYGSSYLDIADINQDGKPDLIHSCGDNYDYSYAWRCCMNLH"
misc_feature complement(428704..428892)
/locus_tag="Halhy_0340"
/note="Family description; Region: VCBS; pfam13517"
/db_xref="CDD:205695"
gene complement(429826..433380)
/locus_tag="Halhy_0341"
/db_xref="GeneID:10584497"
CDS complement(429826..433380)
/locus_tag="Halhy_0341"
/note="InterPro IPR013517:IPR011519;
KEGG: dfe:Dfer_4948 ASPIC/UnbV domain protein;
PFAM: ASPIC/UnbV; FG-GAP;
SPTR: ASPIC/UnbV domain protein;
IMG reference gene:2504769696;
PFAM: ASPIC and UnbV"
/codon_start=1
/transl_table=11
/product="ASPIC/UnbV domain-containing protein"
/protein_id="YP_004445126.1"
/db_xref="GI:332662338"
/db_xref="InterPro:IPR011519"
/db_xref="GeneID:10584497"
/translation="MKSSNILPILLILLASCGKNKAVLFEELSADKTGVTFNNTISDN
DTFNILTFEYIYNGGGVAIADFNDDGLQDLFFTGNQVENQLYLNKGDWKFEDITSKAG
VGGKDRWKAGVAITDLNYDGKMDIYIACMTYNPGPRRANLLYINQGNDKNGVPTFKEE
AQAYGIADTSYTTACAFLDYDNDGDQDLYLAVNHQRKNEFPNSFRPKSTDGSSYNHDR
LYRNDWDPVKKHAAFTEVSLEAGIKGEGFGLAINITDINRDGWKDIYVSNDYVTNDHL
YINNQDGTFTDRAGEYFKHTSYSAMGNEIVDINNDGLMDIIALDMMPEDNYRRKTMLP
ANNYNTFQNYEEYKYQHQYVRNTLQLNRGFVPGTQNPVFSEISMLAGVSSTDWSWAPI
AADFDLDGYRDLIVTNGFPKDVTDLDFVDYNSNAYAYASKGFMNEEIPSVKLRNYAFR
NRGDLTFESMGEKWGITQNSFSNGGAYGDLDNDGDLDYVVNNINDPASLFRNNLIGMD
APNWLGIRLKGDSLNPMGLGSLVEIHYGKGEKQYWEHSIYRGYLSSVQALAHFGLGEN
QLVEKIIVTWPNQKQQVLTKVKANQVLEIEFRNAKTAPPPPPPPAQPWFSNVTTALGL
NYTHQETDFIDFNLQPLLPHKLSQYGPGLAVADVNGDQLDDFFVSGGHFHKGRFFLQK
TDGTFSEQDLLEGIEGSDKKGEDLGALFFDADQDGDQDLYLVRGGVEFPADHPSYQDV
LYLNNNNQFIPAKGALPAFLKSGTCVRAADFDRDGDLDLFITGRAKHKAYPAPLSSYL
LRNDSKPGKPKFVLANDQLAPGLNDLGLVCDALWTDYDQDGWVDLLLAGEWMPLTLFK
NNQGKLENVTAGSGLEKYTGWWSSLVGGDFDGDGDVDYLAGNLGLNTLFKASAEHPVG
IYAADFDGNQGYDAIPSVFFPNRQGKLEEFPYHNRMDMDKQLIASKRAYLMHAEFAQT
NMPQYLSNFKGIKPLHLTATHMQSSFIRNLGNGKFSVESLPTEAQFAPIYAMSAGDWN
RDGHLDALCVGNDFGSEVTTGRYDAFNGLLLLGNGKGGFKPASLQEAGFYLPGDAKSM
VQLSNARGEQCFVVGQNRGPIQVFKPSRAATRLFSYGEKDAFAVVKMANGKTQRHELY
QGHTFLSQSTRKLWMPANAVEVGITNFQGKTRVEKLAK"
misc_feature complement(432997..433188)
/locus_tag="Halhy_0341"
/note="Family description; Region: VCBS; pfam13517"
/db_xref="CDD:205695"
misc_feature complement(432811..433032)
/locus_tag="Halhy_0341"
/note="Family description; Region: VCBS; pfam13517"
/db_xref="CDD:205695"
misc_feature complement(432583..432846)
/locus_tag="Halhy_0341"
/note="Family description; Region: VCBS; pfam13517"
/db_xref="CDD:205695"
misc_feature complement(432427..432618)
/locus_tag="Halhy_0341"
/note="Family description; Region: VCBS; pfam13517"
/db_xref="CDD:205695"
misc_feature complement(431596..431805)
/locus_tag="Halhy_0341"
/note="ASPIC and UnbV; Region: UnbV_ASPIC; pfam07593"
/db_xref="CDD:203690"
misc_feature complement(431212..431412)
/locus_tag="Halhy_0341"
/note="Family description; Region: VCBS; pfam13517"
/db_xref="CDD:205695"
misc_feature complement(431038..431247)
/locus_tag="Halhy_0341"
/note="Family description; Region: VCBS; pfam13517"
/db_xref="CDD:205695"
misc_feature complement(430846..431073)
/locus_tag="Halhy_0341"
/note="Family description; Region: VCBS; pfam13517"
/db_xref="CDD:205695"
gene 433938..437171
/locus_tag="Halhy_0342"
/db_xref="GeneID:10584498"
CDS 433938..437171
/locus_tag="Halhy_0342"
/note="InterPro IPR012910:IPR000531;
KEGG: sli:Slin_0274 TonB-dependent receptor;
PFAM: TonB-dependent receptor, plug; TonB-dependent
receptor, beta-barrel;
SPTR: TonB-dependent receptor;
IMG reference gene:2504769697;
PFAM: TonB-dependent Receptor Plug Domain; TonB dependent
receptor;
TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA
subfamily, signature region; TonB-linked outer membrane
protein, SusC/RagA family"
/codon_start=1
/transl_table=11
/product="TonB-dependent receptor plug"
/protein_id="YP_004445127.1"
/db_xref="GI:332662339"
/db_xref="InterPro:IPR000531"
/db_xref="InterPro:IPR012910"
/db_xref="InterPro:IPR014766"
/db_xref="GeneID:10584498"
/translation="MKNSYSALLQRLVLFVLLCLPAIAAIGQRTVSGKITDTDREGLP
GVNVLLKGTAAGTVTELDGSFSLEVPSTGGSLVVSYVGYRTIEVALDAQSSYNITLEE
DVSTLKELIVTGYTVDSRREATGAVSTVKAKDLSLVPSGNVEQQLAGRVAGVTVITNG
APGTNSQIRVRGFGSFGGNEPLYIVDGVPVGSTDFLNPGDIESTTVLKDAAAASIYGA
RAANGVIVYTTRKGSKNARKLSVIYDGLYGFTDPGNGQEMLNPQDFATWTAKGYTNSG
ILFDHPQFGKIGLGGSAPVIPDYINVGGRSGVVGSVDLNAEKAKYNVDPSRGAVYQVV
RANKEGTNWFDEITRVAPITRHTLGFSGGSENSRFYFGLSTQRQAGILKYNEFNRHAF
RANSEFNLSKKLRIGENLQFTYRQVLAPGISGDIGLADDENEILQAFRMPSIIPVYDE
FGGYGGTAAKGFNNPRNPVATLDGGKDNRSHNIGLFGNLYAEYDLVPGLTLRTSLGGQ
YGSFYNWGYGRLQYENSENNSAFSYSEGGGFGFNWVVTNTANYKKKFGIHGVDVLVGQ
EAIKTGISRNINANGINPFSTDPDFVTISTLGSRNPPNSGLSTPVTFASYFGRVAYNM
NDKYIVTALVRRDGSSRFGENNRYGVFPAFSAAWRISSEKFMENLKWIDDLKIRGGYG
IMGNSNNVAPTNQFSLYGGNIGNSSYDINGSNSSAAEGFYRTRIGNPDAKWETSVTQN
IGFDGTFFNGKLDVILDIWNKKTRDLLLQVPIPATNGPEAAAPTVNIAEMLNAGVDIQ
VITRGNLVGDLKYELNVTAGTLKNEITSLAPGLTYITSINPGYRGLEPIRNQLGQSIS
SFFGYQVTGLFQTAEEVAGAPAQDGKGVGRFRYADINKDGKIDPEDRTYLGSPVPKFS
GGIGLTLTYKSFDLTAYANGVFGNKIFNASKWFTDFFPSFQGASQSVRIKDSWSPENR
GATIPIFETASNFSTNQQANSFYIENGDYVRLQNLGIGYTLPQSLLGKFNITRLRVFA
SANNLLTITKYQGLDPSVGGNADTNFGIDIGNYPLTQSFNFGVNVGF"
misc_feature 434022..437168
/locus_tag="Halhy_0342"
/note="TonB-linked outer membrane protein, SusC/RagA
family; Region: OMP_RagA_SusC; TIGR04056"
/db_xref="CDD:211898"
misc_feature 434025..434273
/locus_tag="Halhy_0342"
/note="Cna protein B-type domain; Region: Cna_B_2;
pfam13715"
/db_xref="CDD:205890"
misc_feature 434292..434564
/locus_tag="Halhy_0342"
/note="TonB-dependent Receptor Plug Domain; Region: Plug;
pfam07715"
/db_xref="CDD:203737"
misc_feature 436011..>436574
/locus_tag="Halhy_0342"
/note="TonB dependent receptor; Region: TonB_dep_Rec;
pfam00593"
/db_xref="CDD:201331"
gene 437219..438958
/locus_tag="Halhy_0343"
/db_xref="GeneID:10584499"
CDS 437219..438958
/locus_tag="Halhy_0343"
/note="InterPro IPR012944;
KEGG: dfe:Dfer_4947 RagB/SusD domain protein;
PFAM: RagB/SusD;
SPTR: RagB/SusD domain protein;
IMG reference gene:2504769698;
PFAM: SusD family"
/codon_start=1
/transl_table=11
/product="RagB/SusD domain-containing protein"
/protein_id="YP_004445128.1"
/db_xref="GI:332662340"
/db_xref="InterPro:IPR012944"
/db_xref="GeneID:10584499"
/translation="MKNRVLITGLATAILAMIAFACKDSFLEVAPTGQLANAQLTSAK
GIESALTAVYSQVNGRFRRMASPTNWVWGSIRGGDANKGTDPGDFSDINPIQRFEYQS
TQGVIQENWLGLYEGIARANLVLRLIADAQPDVAEATKTSFAAQARFLRAHYYFELKR
NFNNTPYVDETVDYGAGIELVKNDQDLWPKIEADMKFALENLPATQAQVGRVNRWAAA
SYLGKIYLYQKKYAEAKAQFDAVIANGVTSNNRKYALVPNYGDIFKASNDNNSESIWA
YQAAANTGSVNNANPEFDLNFPYNTGPNGPGNCCGFFQPSFELVNSFRVDANGLPLPN
GTYNNTGNEVKTDMGVAASTAFTPDAGTLDPRLDWSVGRRGIPYLDWQDHPGAAWIRN
QPNGGPYSPKKYTYYKSDVGSLQDNTSWTPGYTALNYTIIRFADILLMAAECEVEIGS
LEKAREYVNLIRARAANPASWVKRADGSNAANYVIGLYNTPFANQAAARTAVQFERKL
ELSGEGHRFYDLVRWGIAAPTINAYLAYESKFLAGTLGGSTFAANKHEYLPIPQAQID
IVGSAILKQNPGY"
misc_feature 437291..437896
/locus_tag="Halhy_0343"
/note="starch binding outer membrane protein SusD; Region:
SusD; cl15876"
/db_xref="CDD:210276"
misc_feature 438029..438955
/locus_tag="Halhy_0343"
/note="SusD family; Region: SusD; pfam07980"
/db_xref="CDD:203828"
gene complement(439117..440466)
/locus_tag="Halhy_0344"
/db_xref="GeneID:10584500"
CDS complement(439117..440466)
/locus_tag="Halhy_0344"
/note="COGs: COG0415 Deoxyribodipyrimidine photolyase;
InterPro IPR006050:IPR005101;
KEGG: cpi:Cpin_6960 deoxyribodipyrimidine photo-lyase;
PFAM: DNA photolyase, FAD-binding/Cryptochrome,
C-terminal; DNA photolyase, N-terminal;
PRIAM: Deoxyribodipyrimidine photo-lyase;
SPTR: Deoxyribodipyrimidine photolyase;
IMG reference gene:2504769699;
PFAM: FAD binding domain of DNA photolyase; DNA
photolyase"
/codon_start=1
/transl_table=11
/product="deoxyribodipyrimidine photo-lyase"
/protein_id="YP_004445129.1"
/db_xref="GI:332662341"
/db_xref="InterPro:IPR002081"
/db_xref="InterPro:IPR005101"
/db_xref="InterPro:IPR006050"
/db_xref="InterPro:IPR014729"
/db_xref="InterPro:IPR018394"
/db_xref="GeneID:10584500"
/translation="MQAITLFWFRRDLRLQDNAGLYHALKSNFPVLPLFIFDTEILDE
LDDPEDARVAFLHQRITELQAELEHLGSSMLVRYGKPAEVWPEILQDYLVAEVYTNHD
YEPRAIQRDEAVQNLLAQQNIPYFSFKDQVIFEKLEVTKLDGKPYTVFTPYSRMWKNC
LASQMETIQENGIEQVISFFLKPYPTEKYYPNFWQTAPPPLPALSAMGFQPSSIAIPP
TTVSRGLIKQYDKTRDFPYLNGTSRLGIHFRFGTISIREKARRALELNETFLNELIWR
DFYAQILFNFPHVAQRSFRPEYDQIEWRNDEDEFEKWCAGKTGYPIVDAGLRELNATG
YMHNRVRMITASFLTKHLLIDWRWGEAYFAKKLLDYDLASNNGGWQWAAGCGTDAAPY
FRVFSPAAQQEKFDPEYKYVRKWVPEYGTDAYPKPIVDHKFARERCLEVYKAALKGG"
misc_feature complement(439132..440463)
/locus_tag="Halhy_0344"
/note="Deoxyribodipyrimidine photolyase [DNA replication,
recombination, and repair]; Region: PhrB; COG0415"
/db_xref="CDD:30764"
misc_feature complement(439981..440454)
/locus_tag="Halhy_0344"
/note="DNA photolyase; Region: DNA_photolyase; pfam00875"
/db_xref="CDD:201485"
misc_feature complement(439132..439791)
/locus_tag="Halhy_0344"
/note="FAD binding domain of DNA photolyase; Region:
FAD_binding_7; pfam03441"
/db_xref="CDD:202632"
gene complement(440865..441326)
/locus_tag="Halhy_0345"
/db_xref="GeneID:10584501"
CDS complement(440865..441326)
/locus_tag="Halhy_0345"
/note="IMG reference gene:2504769700;
PFAM: SpoOM protein"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004445130.1"
/db_xref="GI:332662342"
/db_xref="InterPro:IPR009776"
/db_xref="GeneID:10584501"
/translation="MIGKVKKWLGIEGVKMELILEEDATAQKGMVSGTIRFTSMNSQV
VTKVKVVFIERYSRGRGKDKLVDEYELGAIELHEDIVVPAGEAEEVEFNLSYNLVRSE
MDEMEKSNFLLSPFIKAAKRISAVKSEYRIEAEAKVKGTALNPFDRKEVKI"
gene complement(441436..441963)
/locus_tag="Halhy_0346"
/db_xref="GeneID:10584502"
CDS complement(441436..441963)
/locus_tag="Halhy_0346"
/note="KEGG: phe:Phep_0743 hypothetical protein;
SPTR: uncharacterized protein;
IMG reference gene:2504769701"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004445131.1"
/db_xref="GI:332662343"
/db_xref="GeneID:10584502"
/translation="MALRAQEPPTPRTPEPTNMTTLSPSSRVWIYASNKPFTEADVPA
IRMQIKEFAQQWVSHNRQLRADADVLHNRFVVLMVDESQADASGCSIDKSVAFLKGLQ
AEYGVDLFNRMIFSYQDAAGQVYSVDRDTFARLYATEQINDDTLVFDPLVATKQDLDQ
AFVKKLSQSWHKRMI"
gene complement(442001..443078)
/locus_tag="Halhy_0347"
/db_xref="GeneID:10584503"
CDS complement(join(442001..443017,443019..443078))
/locus_tag="Halhy_0347"
/ribosomal_slippage
/note="SPTR: Peptide chain release factor 2;
manually curated;
IMG reference gene:2504769702;
PFAM: PCRF domain; RF-1 domain;
TIGRFAM: peptide chain release factor 2"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004445132.1"
/db_xref="GI:332662344"
/db_xref="InterPro:IPR000352"
/db_xref="InterPro:IPR004374"
/db_xref="InterPro:IPR005139"
/db_xref="GeneID:10584503"
/translation="MTIEQLRDLRERLVSLGRYLDVENRLIQIEEQEQLSLDPTFWND
PKRAETILKELKSHKNWVAQYKAAEAEVDDAEVLLEFNKEGEATEEEVDQKYAEALAV
IEGLEFHTTLNQPEDELNVVLEINAGAGGTEACDWAEMLYRMYMMWAQRRGFKFTELN
RQDGDVAGLKSASIEIEGEYVFGLLKGENGVHRLVRVSPYNSQGKRMTSFSSVFVHPM
VDDSIEIEINPADLEWDTFRASGAGGQHVNKTESAVRVRHLPSGIVAECQQERSQHMN
RDKAMQMLKSRLYERELEKQKAEKETIESGKMKNEWGSQIRSYVLDDRRVKDHRTGYQ
TSQTDAVLNGDIDEFLKAFLMHHD"
misc_feature complement(join(442016..443017,443019..443069))
/locus_tag="Halhy_0347"
/note="peptide chain release factor 2; Validated; Region:
prfB; PRK00578"
/db_xref="CDD:179072"
misc_feature complement(442514..442813)
/locus_tag="Halhy_0347"
/note="This domain is found in peptide chain release
factors; Region: PCRF; smart00937"
/db_xref="CDD:198005"
misc_feature complement(442088..442426)
/locus_tag="Halhy_0347"
/note="RF-1 domain; Region: RF-1; pfam00472"
/db_xref="CDD:201249"
gene complement(443208..444131)
/locus_tag="Halhy_0348"
/db_xref="GeneID:10584504"
CDS complement(443208..444131)
/locus_tag="Halhy_0348"
/note="COGs: COG0545 FKBP-type peptidyl-prolyl cis-trans
isomerase 1;
InterPro IPR001179;
KEGG: mtt:Ftrac_2531 peptidylprolyl isomerase fkbp-type;
PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type;
SPTR: 70 kDa peptidylprolyl isomerase;
IMG reference gene:2504769703;
PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase;
Domain amino terminal to FKBP-type peptidyl-prolyl
isomerase"
/codon_start=1
/transl_table=11
/product="FKBP-type peptidylprolyl isomerase"
/protein_id="YP_004445133.1"
/db_xref="GI:332662345"
/db_xref="InterPro:IPR000774"
/db_xref="InterPro:IPR001179"
/db_xref="GeneID:10584504"
/translation="MRILSCLLLAVLILAGCKKEQKLPSGYKYVVHTKSSGKGLKAGD
FAYYRFQLRNGDSVVASNFQLIQVPDSATLKQQPQNPIFEALLRMKEKDSLTIFVPLD
TLKEEQKPDGFKGAKLMYYDMVVKDVLTTDEMQKIFTDFQKNAEAKTTKRSPEQMKSE
LARAKAFTEKTAKEYLAGTLKGIKTTASGLKYLVHDPGTGSVFKNDDIVYLDYYGALT
NGTMFDNSFERETDFSFPLGRQPLIPGWMEGLQLVKKGMKITFFIPAELGYGPQGSPP
KIPANAELVFYIEGHDSFTPSPYVLAGQPGM"
misc_feature complement(443550..>443801)
/locus_tag="Halhy_0348"
/note="Domain amino terminal to FKBP-type peptidyl-prolyl
isomerase; Region: FKBP_N; pfam01346"
/db_xref="CDD:189949"
misc_feature complement(443265..443522)
/locus_tag="Halhy_0348"
/note="FKBP-type peptidyl-prolyl cis-trans isomerase;
Region: FKBP_C; pfam00254"
/db_xref="CDD:201116"
gene complement(444199..445221)
/locus_tag="Halhy_0349"
/db_xref="GeneID:10584505"
CDS complement(444199..445221)
/locus_tag="Halhy_0349"
/note="COGs: COG0618 Exopolyphosphatase-related protein;
InterPro IPR001667:IPR003156;
KEGG: phe:Phep_0539 phosphoesterase RecJ domain protein;
PFAM: Phosphoesterase, RecJ-like; Phosphoesterase, DHHA1;
SPTR: uncharacterized protein;
IMG reference gene:2504769704;
PFAM: DHHA1 domain; DHH family"
/codon_start=1
/transl_table=11
/product="phosphoesterase RecJ domain-containing protein"
/protein_id="YP_004445134.1"
/db_xref="GI:332662346"
/db_xref="InterPro:IPR001667"
/db_xref="InterPro:IPR003156"
/db_xref="GeneID:10584505"
/translation="MENSQALRKFLAEPRKAVILTHRNPDGDAIGSSLALYHLLIKMG
HSPVVVCPSEYPVFLEWMDGVHEMVIFDADMDRAKAEIESGDIFFCLDFNALDRIDKV
GELVAPIAKPKVMIDHHLEPESFPEYLLSDTQASSTCELIYDFIQLMDWEEHLDIKIG
ECIFTGIVTDTGSFKYSTSPKLYRTVARLVELGVNDYLLQDLITNSQEEKHLRLLGHC
LYNRMEILEEYRTGIITLTKEDYARFDIQRGDTEGIVNYILRIRGIIMAAFITEQPTI
VKISLRSKGDFSVQEIAQKHFKGGGHKNASGGASFIGLKATVKKFRELLPEYREALNR
VNEFTV"
misc_feature complement(444247..445203)
/locus_tag="Halhy_0349"
/note="Exopolyphosphatase-related proteins [General
function prediction only]; Region: COG0618"
/db_xref="CDD:30963"
misc_feature complement(444718..445191)
/locus_tag="Halhy_0349"
/note="DHH family; Region: DHH; pfam01368"
/db_xref="CDD:201752"
misc_feature complement(444211..444426)
/locus_tag="Halhy_0349"
/note="DHHA1 domain; Region: DHHA1; pfam02272"
/db_xref="CDD:202185"
gene 445541..445960
/locus_tag="Halhy_0350"
/db_xref="GeneID:10584506"
CDS 445541..445960
/locus_tag="Halhy_0350"
/note="COGs: COG0105 Nucleoside diphosphate kinase;
HAMAP: Nucleoside diphosphate kinase;
InterPro IPR001564;
KEGG: cpi:Cpin_5469 nucleoside-diphosphate kinase;
PFAM: Nucleoside diphosphate kinase, core;
PRIAM: Nucleoside-diphosphate kinase;
SMART: Nucleoside diphosphate kinase, core;
SPTR: Nucleoside diphosphate kinase;
IMG reference gene:2504769705;
PFAM: Nucleoside diphosphate kinase"
/codon_start=1
/transl_table=11
/product="nucleoside diphosphate kinase"
/protein_id="YP_004445135.1"
/db_xref="GI:332662347"
/db_xref="InterPro:IPR001564"
/db_xref="GeneID:10584506"
/translation="MAGNRTFTMIKPDAVAAGHIGAILAQINEAGFRIVAMKLTKLSQ
EKAGEFYEVHKERPFYGELVDFMSSGPIVAAILEKDNAVADFRTLIGATNPANAEPGT
IRARFAKSMGENAVHGSDSDENAAIEGAFHFAGTEQF"
misc_feature 445553..445939
/locus_tag="Halhy_0350"
/note="Nucleoside diphosphate kinase Group I
(NDPk_I)-like: NDP kinase domains are present in a large
family of structurally and functionally conserved proteins
from bacteria to humans that generally catalyze the
transfer of gamma-phosphates of a nucleoside...; Region:
NDPk_I; cd04413"
/db_xref="CDD:58528"
misc_feature order(445571..445573,445691..445693,445715..445717,
445799..445801,445817..445819,445850..445852,
445880..445882,445889..445891,445895..445900,
445922..445924)
/locus_tag="Halhy_0350"
/note="active site"
/db_xref="CDD:58528"
misc_feature order(445583..445585,445598..445606,445613..445615,
445622..445624,445649..445657)
/locus_tag="Halhy_0350"
/note="multimer interface [polypeptide binding]; other
site"
/db_xref="CDD:58528"
gene complement(446050..448443)
/locus_tag="Halhy_0351"
/db_xref="GeneID:10584507"
CDS complement(446050..448443)
/locus_tag="Halhy_0351"
/note="COGs: COG1193 Mismatch repair ATPase (MutS family);
HAMAP: MutS2 protein;
InterPro IPR000432:IPR002625:IPR007696;
KEGG: phe:Phep_2920 Smr protein/MutS2;
PFAM: Smr protein/MutS2 C-terminal; DNA mismatch repair
protein MutS, C-terminal;
SMART: DNA mismatch repair protein MutS, C-terminal; DNA
mismatch repair protein MutS, core; Smr protein/MutS2
C-terminal;
SPTR: Smr protein/MutS2;
IMG reference gene:2504769706;
PFAM: MutS domain V; Smr domain;
TIGRFAM: MutS2 family protein"
/codon_start=1
/transl_table=11
/product="MutS2 protein"
/protein_id="YP_004445136.1"
/db_xref="GI:332662348"
/db_xref="InterPro:IPR000432"
/db_xref="InterPro:IPR002625"
/db_xref="InterPro:IPR005747"
/db_xref="InterPro:IPR007696"
/db_xref="GeneID:10584507"
/translation="MRLEPKDLFEKLEFDKIIELLVKECLGEQGIERIRALQPQTDLI
QIEERLKEVTELKRSIEHNDRLPLLAYENIDSDLQLLAIVDAVLPEDGLRRINTILVS
IGNIYKFFTPSRREFYKTLYEVVRPVHFDPALAKEIDRVIDPDGNIRPDASPELLRIH
KLTQSKMKELDRVFRDIINDYRAKGWLSDSVESFRNGRRVLSVPAEHKRKIRGIIHDE
SATGKTAFIEPEAVIEINNDIFDLEQQERREIYRILKELSTILRPYVPQLHQYQEIMV
YFDVVQAKARLAVRMKAIAPLMLDTPSLEIYEGYHPLLLLKNSGSGKKTVPFDLRLDG
GNRILVLSGPNAGGKSITMKSTGLLQLMAQSGLLIPVNKRTELGIFHNFFADIGDQQS
IEDDLSTYSSRLANMRLFLEHANERTLVLIDEFGSGTDPQIGGAIAESILWELNFRKS
FGVITTHYSNLKIFAYKSKGILNGSMVFDKENLAPTYELKVGRPGSSYAFEIAEKSGL
GGKVLDYAKNRVGKNEKAVDQLLIDLQREKQEVEEELKGLKDRQEKLDKLMKSYDSMQ
RDLDFRRKRMKLEAKEQDLQKTSQDNKDLDKLVRELREARNLEQAMEAAAKAREEKKK
LVEQVTQLREEVYHSPESRPKNERPITKGDFVKLVAGGATGKVESIKGDKVVVEVGLM
RMTLNIRDLQLSNPTLDLRQTKSVQSDVVQRSAAFYPRIDIRGVRYEEALKMVEDFMD
QALITSSNHLQIVHGKGNGTLRNAVRSKLKEYQNVEMEIRHPEQEGGGDGVTLIEFK"
misc_feature complement(446053..448428)
/locus_tag="Halhy_0351"
/note="recombination and DNA strand exchange inhibitor
protein; Reviewed; Region: PRK00409"
/db_xref="CDD:179009"
misc_feature complement(446920..447531)
/locus_tag="Halhy_0351"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:213113"
misc_feature complement(447394..447417)
/locus_tag="Halhy_0351"
/note="Walker A/P-loop; other site"
/db_xref="CDD:72971"
misc_feature complement(order(447073..447075,447172..447177,
447280..447282,447391..447399,447403..447408))
/locus_tag="Halhy_0351"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:72971"
misc_feature complement(447280..447291)
/locus_tag="Halhy_0351"
/note="Q-loop/lid; other site"
/db_xref="CDD:72971"
misc_feature complement(447226..447267)
/locus_tag="Halhy_0351"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:72971"
misc_feature complement(447172..447189)
/locus_tag="Halhy_0351"
/note="Walker B; other site"
/db_xref="CDD:72971"
misc_feature complement(447154..447165)
/locus_tag="Halhy_0351"
/note="D-loop; other site"
/db_xref="CDD:72971"
misc_feature complement(447067..447087)
/locus_tag="Halhy_0351"
/note="H-loop/switch region; other site"
/db_xref="CDD:72971"
misc_feature complement(<446662..>446916)
/locus_tag="Halhy_0351"
/note="The Bin/Amphiphysin/Rvs (BAR) domain, a
dimerization module that binds membranes and detects
membrane curvature; Region: BAR; cl12013"
/db_xref="CDD:209413"
misc_feature complement(446053..446283)
/locus_tag="Halhy_0351"
/note="Smr domain; Region: Smr; pfam01713"
/db_xref="CDD:201932"
gene complement(448603..449289)
/locus_tag="Halhy_0352"
/db_xref="GeneID:10584508"
CDS complement(448603..449289)
/locus_tag="Halhy_0352"
/note="COGs: COG0602 Organic radical activating protein;
KEGG: pla:Plav_3149 hypothetical protein;
SPTR: Radical SAM domain protein;
IMG reference gene:2504769707"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004445137.1"
/db_xref="GI:332662349"
/db_xref="GeneID:10584508"
/translation="MTTYKIKEIFYTLQGEGAQSGRPAVFCRFSGCNLWSGREEDRSK
AICQFCDTDFWGMDGENGGKYNAEELADKVIGLWPGGSEKRIANSEKQVGEISDLRGK
PYVVCTGGEPLLQLDEPLIEAFHRRGLEVAVETNGTIAAPAGLDWICMSPKANTELLI
QSGHELKLVYPQAGAEPERYEHLDFEHFYLQPMDGVDAQHNTRLTLAYCLSHPQWSLS
LQTHKILGIA"
misc_feature complement(448606..449289)
/locus_tag="Halhy_0352"
/note="Organic radical activating enzymes
[Posttranslational modification, protein turnover,
chaperones]; Region: NrdG; COG0602"
/db_xref="CDD:30947"
misc_feature complement(<448837..>448992)
/locus_tag="Halhy_0352"
/note="Radical SAM superfamily. Enzymes of this family
generate radicals by combining a 4Fe-4S cluster and
S-adenosylmethionine (SAM) in close proximity. They are
characterized by a conserved CxxxCxxC motif, which
coordinates the conserved iron-sulfur cluster; Region:
Radical_SAM; cd01335"
/db_xref="CDD:100105"
gene 449442..451109
/locus_tag="Halhy_0353"
/db_xref="GeneID:10584509"
CDS 449442..451109
/locus_tag="Halhy_0353"
/note="COGs: COG1069 Ribulose kinase;
HAMAP: L-ribulokinase;
InterPro IPR005929:IPR018484:IPR018485;
KEGG: ssm:Spirs_3429 L-ribulokinase;
PFAM: Carbohydrate kinase, FGGY, C-terminal; Carbohydrate
kinase, FGGY, N-terminal;
PRIAM: Ribulokinase;
SPTR: Ribulokinase;
TIGRFAM: L-ribulokinase;
IMG reference gene:2504769708;
PFAM: FGGY family of carbohydrate kinases, N-terminal
domain; FGGY family of carbohydrate kinases, C-terminal
domain;
TIGRFAM: L-ribulokinase"
/codon_start=1
/transl_table=11
/product="ribulokinase"
/protein_id="YP_004445138.1"
/db_xref="GI:332662350"
/db_xref="InterPro:IPR000577"
/db_xref="InterPro:IPR005929"
/db_xref="InterPro:IPR018484"
/db_xref="InterPro:IPR018485"
/db_xref="GeneID:10584509"
/translation="MKQYVLGADFGTDSVRAVLVDTANGAELASAVSYYPRWKKGLYC
QPAQNQFRQHPLDYIESLEDAVKRTLAELPGIDPAYVVAITVDTTGSTPVAVDQSGTP
LALLPDFAENPNGMFILWKDHTAIAEAAEINQKARNWGGIDYTMYEGGIYSSEWFWAK
IMHTVRSDESVNKAAYSWMEHCDWVTHLLIGGSDALSTKRSRCAAGHKAMWHESWNGL
PSEAFLTHLEPKLSGLRNRLYTDTYTADEVAGNLSAEWAQRLGLHEGVVVSVGTFDAH
AGAVGGEAEAYTLVKVMGTSTCDMLVAPLEEVQDKLVRGICGQVDGSIVPGMMGLEAG
QSAFGDLLAWFKQVLSWPLQQLLPTSSLLDETTKTALLEEMEDKIIAELSQAAAKIPV
GQTGIVALDWVNGRRTPDADQSLKGAIMGLNMGSDAPSIFKSLVEAICFGSKKIVDRF
ESEGIPIKAVVGMGGVAKKSEFVMQTLADVLNRPIKIARSEQAPALGAAMYAAVAAGI
YADVASASQAMGNGFDRIYHPIAENAVLYEKLYAEYGKFGDFVERKV"
misc_feature 449442..451103
/locus_tag="Halhy_0353"
/note="ribulokinase; Provisional; Region: PRK04123"
/db_xref="CDD:179742"
misc_feature 449448..450917
/locus_tag="Halhy_0353"
/note="Ribulokinases; belongs to the FGGY family of
carbohydrate kinases; Region: FGGY_RBK; cd07781"
/db_xref="CDD:198358"
misc_feature order(449454..449456,449460..449462,449466..449468,
449487..449489,449493..449495,449499..449501,
449514..449519,449529..449531,449685..449702,
449877..449888,449892..449894,449907..449909,
450045..450050,450057..450062,450072..450080,
450171..450185,450240..450242,450246..450248,
450270..450272,450276..450284,450372..450374,
450378..450380,450387..450413,450417..450419,
450429..450437,450660..450662,450672..450674,
450915..450917)
/locus_tag="Halhy_0353"
/note="N- and C-terminal domain interface [polypeptide
binding]; other site"
/db_xref="CDD:198358"
misc_feature order(449466..449468,449472..449483,449487..449489,
449706..449708,449712..449714,449799..449801,
450261..450266,450318..450326,450333..450335,
450456..450458,450468..450470,450588..450590,
450831..450839,450849..450851)
/locus_tag="Halhy_0353"
/note="active site"
/db_xref="CDD:198358"
misc_feature order(449466..449468,449472..449483,449487..449489,
450261..450263,450318..450326,450456..450461,
450465..450470,450588..450593,450597..450599,
450831..450839,450849..450851)
/locus_tag="Halhy_0353"
/note="MgATP binding site [chemical binding]; other site"
/db_xref="CDD:198358"
misc_feature order(449466..449468,449475..449477,450261..450263)
/locus_tag="Halhy_0353"
/note="catalytic site [active]"
/db_xref="CDD:198358"
misc_feature order(449466..449468,450261..450263)
/locus_tag="Halhy_0353"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:198358"
misc_feature order(449472..449477,449706..449714,449799..449801,
449904..449906,450063..450065,450261..450266,
450324..450326,450333..450335,450435..450437)
/locus_tag="Halhy_0353"
/note="carbohydrate binding site [chemical binding]; other
site"
/db_xref="CDD:198358"
misc_feature order(450459..450461,450471..450473,450480..450485,
450513..450524,450627..450629,450633..450635,
450648..450653,450687..450713,450717..450725)
/locus_tag="Halhy_0353"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:198358"
gene 451302..452003
/locus_tag="Halhy_0354"
/db_xref="GeneID:10584510"
CDS 451302..452003
/locus_tag="Halhy_0354"
/note="COGs: COG0235 Ribulose-5-phosphate 4-epimerase and
related epimerase and aldolase;
InterPro IPR001303;
KEGG: cpi:Cpin_3995 L-ribulose-5-phosphate 4-epimerase;
PFAM: Class II aldolase/adducin, N-terminal;
PRIAM: L-ribulose-5-phosphate 4-epimerase;
SPTR: Class II aldolase/adducin family protein;
IMG reference gene:2504769709;
PFAM: Class II Aldolase and Adducin N-terminal domain;
TIGRFAM: L-ribulose-5-phosphate 4-epimerase"
/codon_start=1
/transl_table=11
/product="L-ribulose-5-phosphate 4-epimerase"
/protein_id="YP_004445139.1"
/db_xref="GI:332662351"
/db_xref="InterPro:IPR001303"
/db_xref="GeneID:10584510"
/translation="MKSAYQSIKEACYEANMQLPQLGLVLFTFGNASVADRSAGVFAI
KPSGVPYAMLKPEDIVIVDFEAVVVEGNKRPSSDTKTHAVLYKYWENVGGIVHTHSTY
ATAWAQTQLDIPILGTTHADHLTVDVPCAPPMDDAMIKGNYEHETGFQIMTDFKRRNY
SYEEVEMILVGNHAPFTWGKSVEKAVYNSAVLEEVARMAYLSVTIRPDVPRLKDALIQ
KHYQRKHGTDAYYGQ"
misc_feature 451314..452000
/locus_tag="Halhy_0354"
/note="L-ribulose-5-phosphate 4-epimerase; Reviewed;
Region: araD; PRK08193"
/db_xref="CDD:181280"
misc_feature 451317..452000
/locus_tag="Halhy_0354"
/note="Class II Aldolase and Adducin head (N-terminal)
domain. Aldolases are ubiquitous enzymes catalyzing
central steps of carbohydrate metabolism. Based on
enzymatic mechanisms, this superfamily has been divided
into two distinct classes (Class I and II); Region:
Aldolase_II; cl00214"
/db_xref="CDD:206906"
misc_feature order(451341..451343,451353..451355,451377..451379,
451449..451451,451455..451460,451596..451598,
451602..451607,451620..451628,451647..451649,
451653..451658,451698..451700,451815..451817,
451848..451850,451869..451871,451881..451883,
451902..451904,451962..451964)
/locus_tag="Halhy_0354"
/note="intersubunit interface [polypeptide binding]; other
site"
/db_xref="CDD:29521"
misc_feature order(451392..451394,451440..451445,451527..451535,
451590..451592,451596..451598,451818..451820)
/locus_tag="Halhy_0354"
/note="active site"
/db_xref="CDD:29521"
misc_feature order(451590..451592,451596..451598,451818..451820)
/locus_tag="Halhy_0354"
/note="Zn2+ binding site [ion binding]; other site"
/db_xref="CDD:29521"
gene 452066..453562
/locus_tag="Halhy_0355"
/db_xref="GeneID:10584511"
CDS 452066..453562
/locus_tag="Halhy_0355"
/note="COGs: COG2160 L-arabinose isomerase;
HAMAP: L-arabinose isomerase;
InterPro IPR003762;
KEGG: cpi:Cpin_3996 L-arabinose isomerase;
PFAM: L-arabinose isomerase;
PRIAM: L-arabinose isomerase;
SPTR: L-arabinose isomerase;
IMG reference gene:2504769710;
PFAM: L-arabinose isomerase; L-arabinose isomerase
C-terminal domain"
/codon_start=1
/transl_table=11
/product="L-arabinose isomerase"
/protein_id="YP_004445140.1"
/db_xref="GI:332662352"
/db_xref="InterPro:IPR003762"
/db_xref="InterPro:IPR004216"
/db_xref="InterPro:IPR009015"
/db_xref="GeneID:10584511"
/translation="MIQLKHLEAWFITGSQHLYGPETLKQVAQNAETIAKALDASGQI
PVKVVFKPIVVGPEEISKLVIEANSTPQCIGLICWMHTFSPAKMWINGLKILRKPLAH
LHTQFNRDIPWSSIDMDFMNLNQSAHGDREFGFIGARMRLSRKVVVGHWQDPEVQERL
GVWSRVAAAWHDWQGGKFVRFGDNMRQVAVTEGDKVEAEIKFGYSVNTHGVGDLVQVI
NAVSDAEINQLIEEYEMEYTLSASLLKGGAQRSSLIEAARIELGMATFLKNGNFKGFT
DTFEDLHGMVQLPGIASQRLMAAGYGFGGEGDWKTAALVRAMKVMAVGLPGGNSFMED
YTYHFQPDNMQVLGAHMLEICPSIAAKKPSCEVHPLGIGGKADPVRLVFNCAAGPALN
ASIVDMGNRFRLIVNEVEAIEPTEDLPKLPVARVLWKVKPDLKTGAAAWILAGGAHHT
CYSQNLSNEYLADFAEIAGIEYVLINERTNLYDFKNELRWNEVYYSHL"
misc_feature 452066..453550
/locus_tag="Halhy_0355"
/note="L-arabinose isomerase; Provisional; Region:
PRK02929"
/db_xref="CDD:179503"
misc_feature 452087..453535
/locus_tag="Halhy_0355"
/note="L-Arabinose isomerase (AI) catalyzes the
isomerization of L-arabinose to L-ribulose, the first
reaction in its conversion into D-xylulose-5-phosphate, an
intermediate in the pentose phosphate pathway, which
allows L-arabinose to be used as a carbon...; Region:
L-arabinose_isomerase; cd03557"
/db_xref="CDD:63888"
misc_feature order(452246..452248,452258..452260,452267..452269,
452327..452329,452483..452488,452594..452596,
452615..452617,452651..452653,452660..452662,
452681..452701,452711..452713,452876..452878,
452903..452908)
/locus_tag="Halhy_0355"
/note="putative hexamer (dimer of trimers) interface
[polypeptide binding]; other site"
/db_xref="CDD:63888"
misc_feature order(452312..452314,452318..452329,452375..452377,
452381..452383,452390..452392,452396..452398,
452402..452404,452411..452419,452426..452428,
452444..452449,452456..452461,452468..452470,
452477..452482,452486..452488,452501..452503,
452507..452509,452540..452542,452624..452635,
453065..453082,453254..453262,453317..453319,
453323..453328,453332..453334,453377..453382,
453389..453391,453398..453400,453407..453409,
453461..453463,453530..453535)
/locus_tag="Halhy_0355"
/note="trimer interface [polypeptide binding]; other site"
/db_xref="CDD:63888"
misc_feature order(452312..452314,452900..452902,452981..452983,
453062..453064,453407..453412)
/locus_tag="Halhy_0355"
/note="putative substrate binding site [chemical binding];
other site"
/db_xref="CDD:63888"
misc_feature order(452981..452983,453062..453064,453410..453412)
/locus_tag="Halhy_0355"
/note="putative metal binding site [ion binding]; other
site"
/db_xref="CDD:63888"
gene 453626..455323
/locus_tag="Halhy_0356"
/db_xref="GeneID:10584512"
CDS 453626..455323
/locus_tag="Halhy_0356"
/note="COGs: COG4146 symporter;
InterPro IPR019900:IPR001734;
KEGG: phe:Phep_2732 SSS sodium solute transporter
superfamily;
PFAM: Sodium/solute symporter;
SPTR: SSS sodium solute transporter superfamily;
TIGRFAM: Sodium/solute symporter, subgroup;
IMG reference gene:2504769711;
PFAM: Sodium:solute symporter family;
TIGRFAM: transporter, SSS family"
/codon_start=1
/transl_table=11
/product="sodium solute transporter superfamily protein"
/protein_id="YP_004445141.1"
/db_xref="GI:332662353"
/db_xref="InterPro:IPR001734"
/db_xref="GeneID:10584512"
/translation="MQSLQTVDYLVFLAYFFLVAGYGYWVYNRKKKTETTTTDFFLAE
GSLTWWAIGASLIASNISAEQFIGMSGNGFFVGIAVAAYEWIAAIALIIVAVFFMPIY
LKNHIYTMPQFLKTRYNETVSMIMTIFWLFLYIFVNLTSILFLGALAINNLIGGGYFH
LIMIGLAVFALIITIGGMKVIGYTDVLQVLVLIIGGLATTWLALTMVSEKFGMGQNVF
AGFNLLMEKADDHFHMIMAKPTIDSSQDYINKYLLLPGIAMYAAGQWIVNLNYWGCNQ
YITQRALGADLNTARTGILFAGFLKLMMPIIVMLPGIAAYVLYQNGELQAQMAPDGKF
LADNAYSAILTFLPTGLKGLSMAALTAAIVASLAGKANSISTIFTLDIYKKYFEKDAD
DRKLVWVGRLTIVASMLLAIALTWNDLLGIGGAGGFTFIQKYTGFISPGVFAMFLLGM
FWKRTTGAAAVAGVLVGFVLSVFFNEYAPTVLGNETILYTAFPNGKGGYEIPFLICMG
LAFGFTMLVMIVMSLFGPKVNPKAFELDAEMFKVKPAIMAMIVATVLILTAIYIKFW"
misc_feature 453653..455320
/locus_tag="Halhy_0356"
/note="Vibrio parahaemolyticus Na(+)/galactose
cotransporter (vSGLT) and related proteins; solute binding
domain; Region: SLC5sbd_vSGLT; cd10325"
/db_xref="CDD:212035"
misc_feature 453659..455311
/locus_tag="Halhy_0356"
/note="putative transporter; Provisional; Region:
PRK10484"
/db_xref="CDD:182493"
misc_feature order(453797..453799,453806..453808,454709..454711,
454718..454723)
/locus_tag="Halhy_0356"
/note="Na binding site [ion binding]; other site"
/db_xref="CDD:212035"
misc_feature order(453803..453805,453818..453820,453872..453877,
453884..453886,454424..454429,454439..454441,
454526..454528,454907..454909,454919..454921)
/locus_tag="Halhy_0356"
/note="substrate binding site [chemical binding]; other
site"
/db_xref="CDD:212035"
gene complement(455421..456116)
/locus_tag="Halhy_0357"
/db_xref="GeneID:10584513"
CDS complement(455421..456116)
/locus_tag="Halhy_0357"
/note="COGs: COG1051 ADP-ribose pyrophosphatase;
InterPro IPR000086;
KEGG: fjo:Fjoh_1117 NUDIX hydrolase;
PFAM: NUDIX hydrolase domain;
SPTR: uncharacterized protein;
IMG reference gene:2504769712;
PFAM: NUDIX domain"
/codon_start=1
/transl_table=11
/product="NUDIX hydrolase"
/protein_id="YP_004445142.1"
/db_xref="GI:332662354"
/db_xref="InterPro:IPR000086"
/db_xref="InterPro:IPR015797"
/db_xref="GeneID:10584513"
/translation="MTEANFTYRADSFKVAIDCILLGFDQRELKILLIHRNFEPAKGS
WSLMGGFLNRDESLNDSAKRILYQLTGLEDIYLEQIFVFGDINRDPVERVLSVCFYAL
IKIEDYDEALGKSHDAHWFPVQKRPKLVFDHEQMVEATLNRLRRRAGYQPIGFELLPE
KFTMMQLLNLYEAIYQRSFDVGNFSKKILSLGILVKTDEKLRGGSKKGSYLYSFDQER
YDSVKEKGFRIIG"
misc_feature complement(455676..456074)
/locus_tag="Halhy_0357"
/note="ADP-ribose pyrophosphatase [Nucleotide transport
and metabolism]; Region: COG1051"
/db_xref="CDD:31251"
misc_feature complement(order(455907..455933,455961..455969))
/locus_tag="Halhy_0357"
/note="nudix motif; other site"
/db_xref="CDD:72880"
gene 456295..457929
/locus_tag="Halhy_0358"
/db_xref="GeneID:10584514"
CDS 456295..457929
/locus_tag="Halhy_0358"
/note="KEGG: cpi:Cpin_4412 PKD domain containing protein;
SPTR: PKD domain containing protein;
IMG reference gene:2504769713"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004445143.1"
/db_xref="GI:332662355"
/db_xref="GeneID:10584514"
/translation="MRRLPKYLVLLVFFTLQLAPFIIHAENSALDVHAQGTQADEICD
NGRDDDGDGLVDLNDPDCACAIIQPKSLIPNPSFEAMNCCPQSQSQLNCADTWIQASE
PTTDYLHTCGWMGWQNLPPPLPFPDGEAVVGFRNGRFNQMADPQWKEYAGACLLGPLK
ANTAYKFKFWVGFTDAVNSPATNIVFYGATDCASLPFGKGNTAHGCPLNGPGWVELGR
VPISGNKEWLLKEINVTPKQNIHAMAIGPDCDVSATAINPYYFFDNLVLDEQRNFDYV
ISAKGYPCTDQFFLDIPVIEGYAYQWYQDGVALVGETKPTLRVKTGEGKYQVRISDEE
GCKVTQAYNHLYPRSTNFVAAKICPGTAYNFNQQKLSSAGEYIDTVKTIHNCDSIVRL
SLSIEDDLLDTVQARILEGEQFKVGTRLFGSPGEFLSTLKSAIGCDSTVLLHLDFYRI
FFPSGFSPNDDGKNDRFGFYGGSELKRIVAFHVFDRWGGMVWSVKDVPPGDSSAFWDG
TMRTQAAPEGLYTYVVTLLLEDGREHVRYGGVTLVR"
misc_feature 457642..457920
/locus_tag="Halhy_0358"
/note="FlgD Ig-like domain; Region: FlgD_ig; cl15790"
/db_xref="CDD:211472"
gene complement(458016..458978)
/locus_tag="Halhy_0359"
/db_xref="GeneID:10584515"
CDS complement(458016..458978)
/locus_tag="Halhy_0359"
/note="COGs: COG2025 Electron transfer flavoprotein alpha
subunit;
InterPro IPR014730:IPR014731;
KEGG: cpi:Cpin_3759 electron transfer flavoprotein alpha
subunit;
PFAM: Electron transfer flavoprotein, alpha subunit,
C-terminal; Electron transfer flavoprotein,
alpha/beta-subunit, N-terminal;
SPTR: Electron transfer flavoprotein alpha subunit;
IMG reference gene:2504769714;
PFAM: Electron transfer flavoprotein domain; Electron
transfer flavoprotein FAD-binding domain"
/codon_start=1
/transl_table=11
/product="electron transfer flavoprotein subunit alpha"
/protein_id="YP_004445144.1"
/db_xref="GI:332662356"
/db_xref="InterPro:IPR001308"
/db_xref="InterPro:IPR014729"
/db_xref="InterPro:IPR014730"
/db_xref="InterPro:IPR014731"
/db_xref="GeneID:10584515"
/translation="MVLVFAESQKGNFKKTAFEAVTYGYKTAQALGTECVALALGSAN
NAADLGLYGASKVLHVADAALDQFDGQVYAKVIAEVSQQVGAKVIVLSHTSTGKAIHG
RLAARLDAGSVAGVNSIPTVDGGFKVKKGVFSGKAIAEYAINSEVKILSVMGNSLQPA
IVGSPAAIEAANVTVPASRVKVKSVSRIEGIVPLPEAELVVSAGRGMKGPENWGIVED
LANTLGATTACSRPVADVHWRPHHEHVGQTGIAIRPNLYIAIGISGAIQHLAGVNNSK
TIVVINKDPEAPFFKAADYGVVGDLFEVVPQLTEAVKKFKAAQG"
misc_feature complement(458037..458978)
/locus_tag="Halhy_0359"
/note="Electron transfer flavoprotein, alpha subunit
[Energy production and conversion]; Region: FixB; COG2025"
/db_xref="CDD:32208"
misc_feature complement(458466..458975)
/locus_tag="Halhy_0359"
/note="The electron transfer flavoprotein (ETF) serves as
a specific electron acceptor for various mitochondrial
dehydrogenases. ETF transfers electrons to the main
respiratory chain via ETF-ubiquinone oxidoreductase. ETF
is an heterodimer that consists of an...; Region:
ETF_alpha; cd01715"
/db_xref="CDD:30170"
misc_feature complement(458151..458405)
/locus_tag="Halhy_0359"
/note="Electron transfer flavoprotein FAD-binding domain;
Region: ETF_alpha; pfam00766"
/db_xref="CDD:189709"
gene complement(459066..459809)
/locus_tag="Halhy_0360"
/db_xref="GeneID:10584516"
CDS complement(459066..459809)
/locus_tag="Halhy_0360"
/note="COGs: COG2086 Electron transfer flavoprotein beta
subunit;
InterPro IPR014730;
KEGG: cpi:Cpin_3760 electron transfer flavoprotein
alpha/beta-subunit;
PFAM: Electron transfer flavoprotein, alpha/beta-subunit,
N-terminal;
SPTR: Electron transfer flavoprotein alpha/beta-subunit;
IMG reference gene:2504769715;
PFAM: Electron transfer flavoprotein domain"
/codon_start=1
/transl_table=11
/product="electron transfer flavoprotein subunit
alpha/beta"
/protein_id="YP_004445145.1"
/db_xref="GI:332662357"
/db_xref="InterPro:IPR000049"
/db_xref="InterPro:IPR012255"
/db_xref="InterPro:IPR014729"
/db_xref="InterPro:IPR014730"
/db_xref="GeneID:10584516"
/translation="MKLLVCVSKTPDTTTKIVFNASKTELDANGVQYIMNPYDEWYAL
VRALELKEALGGTVTLINVGPADNDQVIRKGLAIGADDAVRIDLNPQSALSVAFQIAE
YARQENYDIILLGKETIDYNGSEIGAMVAEYLDQPFISYASKLDTSDGKTASIQRDIE
GGMEELEVDTPFVVSAAKGLAEQRIPNMKGIMMAKSKPLKVVAPAAFEDKAVTVEYTL
PPAKSAVKMIAPDNMEELVKLLHEEAKVI"
misc_feature complement(459204..459806)
/locus_tag="Halhy_0360"
/note="The electron transfer flavoprotein (ETF) serves as
a specific electron acceptor for various mitochondrial
dehydrogenases. ETF transfers electrons to the main
respiratory chain via ETF-ubiquinone oxidoreductase. ETF
is an heterodimer that consists of an...; Region:
ETF_beta; cd01714"
/db_xref="CDD:30169"
misc_feature complement(order(459432..459443,459456..459461,
459465..459470,459621..459623,459693..459695,
459702..459704,459789..459794))
/locus_tag="Halhy_0360"
/note="Ligand binding site [chemical binding]; other site"
/db_xref="CDD:30169"
misc_feature complement(459264..459716)
/locus_tag="Halhy_0360"
/note="Electron transfer flavoprotein domain; Region: ETF;
pfam01012"
/db_xref="CDD:201550"
gene 459975..460298
/locus_tag="Halhy_0361"
/db_xref="GeneID:10584517"
CDS 459975..460298
/locus_tag="Halhy_0361"
/note="InterPro IPR019734;
KEGG: rmr:Rmar_1820 tetratricopeptide TPR_4;
SPTR: Tetratricopeptide TPR_4;
IMG reference gene:2504769716"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004445146.1"
/db_xref="GI:332662358"
/db_xref="InterPro:IPR011990"
/db_xref="InterPro:IPR013026"
/db_xref="GeneID:10584517"
/translation="MSSDRLLQLLQMQEESPADTFVLYALAKEYEGLSDDAEALHYYQ
QIFDHDPLYVGAFYHLAKLYERQNAFLEAVSTYEKGIAVAKEVGDQHALAELQSAKLN
LELEL"
misc_feature 460038..>460247
/locus_tag="Halhy_0361"
/note="Tetratricopeptide repeat domain; typically contains
34 amino acids
[WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-
X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in
a variety of organisms including bacteria, cyanobacteria,
yeast, fungi; Region: TPR; cl02429"
/db_xref="CDD:243034"
misc_feature order(460038..460040,460044..460049,460056..460061,
460146..460151,460155..460160,460167..460172)
/locus_tag="Halhy_0361"
/note="binding surface"
/db_xref="CDD:238112"
misc_feature order(460053..460055,460089..460091,460101..460103,
460110..460112,460155..460157,460191..460193,
460203..460205,460212..460214)
/locus_tag="Halhy_0361"
/note="TPR motif; other site"
/db_xref="CDD:238112"
gene 460335..461051
/locus_tag="Halhy_0362"
/db_xref="GeneID:10584518"
CDS 460335..461051
/locus_tag="Halhy_0362"
/note="IMG reference gene:2504769717;
PFAM: GldM C-terminal domain"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004445147.1"
/db_xref="GI:332662359"
/db_xref="InterPro:IPR022719"
/db_xref="GeneID:10584518"
/translation="MLHKRLIIGLCFALTIWRMDAQKVVASANASHVLYLGTKNQISL
AVADVSYKSLQVWVKVGHLAGENGAYSWEICETPNSFFKAYLYLAYPFADSMRQDSIN
FHVRPLPDPKIVCRPMPCYTPLNAANIQKITLYSIIESNAAMGELMGRCTVLRFEIVL
MRKNKILKNHKNEGADFSSGALLMLKNLRDTDTVKLTKIEARCDCDAKDEYYKEITGT
YHRLLPPIVLKANTIFCGFD"
misc_feature <460404..460940
/locus_tag="Halhy_0362"
/note="gliding motility-associated protein GldM; Region:
GldM_gliding; TIGR03517"
/db_xref="CDD:200284"
gene complement(461278..461997)
/locus_tag="Halhy_0363"
/db_xref="GeneID:10584519"
CDS complement(461278..461997)
/locus_tag="Halhy_0363"
/note="InterPro IPR013216;
KEGG: rmr:Rmar_2320 methyltransferase type 11;
PFAM: Methyltransferase type 11;
SPTR: Methyltransferase type 11;
IMG reference gene:2504769718;
PFAM: Methyltransferase domain"
/codon_start=1
/transl_table=11
/product="type 11 methyltransferase"
/protein_id="YP_004445148.1"
/db_xref="GI:332662360"
/db_xref="InterPro:IPR013216"
/db_xref="GeneID:10584519"
/translation="MKGHQPSNYEPSNPRTLKLLLLLENKIYSWRWRLAQFLELRWWR
RYLRRLDWEAYVEDKRRHWRKVLTLLDVQLAPGERVLDAGCGPAGIFTLLHEQKVDAL
DPLLEKYEKKLPGFQLDKFPHVHFQQLMLEQLEVKETYDLIFCMNAINHVADLDLALG
CLVQALKPNGTLVLSVDVHRHSFFKFIFRLIPGDVLHPQQDDVADYQLFLDEQGLQVE
KTLVLKKGWVFDYVVFKARKR"
misc_feature complement(461344..461835)
/locus_tag="Halhy_0363"
/note="Methyltransferase domain; Region: Methyltransf_23;
pfam13489"
/db_xref="CDD:205667"
misc_feature complement(461470..461763)
/locus_tag="Halhy_0363"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cd02440"
/db_xref="CDD:100107"
misc_feature complement(order(461560..461562,461611..461619,
461695..461700,461728..461733,461737..461751))
/locus_tag="Halhy_0363"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
gene 462028..463173
/locus_tag="Halhy_0364"
/db_xref="GeneID:10584520"
CDS 462028..463173
/locus_tag="Halhy_0364"
/note="InterPro IPR002625;
KEGG: cpi:Cpin_3676 hypothetical protein;
PFAM: Smr protein/MutS2 C-terminal;
SPTR: uncharacterized protein;
IMG reference gene:2504769719;
PFAM: Smr domain"
/codon_start=1
/transl_table=11
/product="Smr protein/MutS2"
/protein_id="YP_004445149.1"
/db_xref="GI:332662361"
/db_xref="InterPro:IPR002625"
/db_xref="GeneID:10584520"
/translation="MEKFNPRTFEPPNPQTLNFQAMRFPIGTKVKFIHTGDEGTVVSL
LDAETLNVRITGDDMEIPVNIENVVPAGQYVAAAQPIKGKPKPQMNIPPPPPRHVPPA
VGVPVKAGNAQYAIIKSMGIQLAFDPIYKEDGSPEKYLIYVINDTRMDVVYNFTLFMG
KRAVLEHSSKLNGLHYERIGEMLFDQLNDSPSVEMECWRLLTDEGGKKLKKELNIKAK
TFFTKVLTAPFLDRPVHHFRMFEKHELELADEKEASAEDLKSYTERNIQPQSKIIHHQ
SEPRHEVKQMAEFNPELDLHVENLVKDQRKLNNADILNLQMRRFEQYLDQAIRIGVDR
VFIIHGVGEGKLKNAIATILMQHPHVKTFKNEYHARYGYGATEVEFS"
misc_feature 462976..463167
/locus_tag="Halhy_0364"
/note="Smr domain; Region: Smr; pfam01713"
/db_xref="CDD:201932"
gene complement(463151..463750)
/locus_tag="Halhy_0365"
/db_xref="GeneID:10584521"
CDS complement(463151..463750)
/locus_tag="Halhy_0365"
/note="COGs: COG0241 Histidinol phosphatase and related
phosphatase;
InterPro IPR006543:IPR006549:IPR013954;
KEGG: cpi:Cpin_3112 histidinol-phosphate phosphatase;
SPTR: Histidinol-phosphate phosphatase;
TIGRFAM: Histidinol-phosphate phosphatase; HAD-superfamily
hydrolase, subfamily IIIA;
IMG reference gene:2504769720;
PFAM: Polynucleotide kinase 3 phosphatase;
TIGRFAM: HAD-superfamily hydrolase, subfamily IIIA;
D,D-heptose 1,7-bisphosphate phosphatase;
histidinol-phosphate phosphatase domain"
/codon_start=1
/transl_table=11
/product="histidinol-phosphate phosphatase"
/protein_id="YP_004445150.1"
/db_xref="GI:332662362"
/db_xref="InterPro:IPR013954"
/db_xref="GeneID:10584521"
/translation="MSYNFGATNESLFFQTLFLDRDGVINERLPGDYVAHWEEFQFTP
RALEALAFFSTYFHRIVVVTNQQGIGKGKMSVGQLEQIHEKMVSEIQQSGGRIDAVYY
CPDLSNTPNNCRKPASGMALMAQNEFPEIDFQQSVMVGDSVSDIEFGQNLGMATVLIE
GKMDEIDKLEHALRNGLRIDQCFASLWEFAAELMKTPPR"
misc_feature complement(463166..463702)
/locus_tag="Halhy_0365"
/note="D,D-heptose 1,7-bisphosphate phosphatase;
Validated; Region: PRK08942"
/db_xref="CDD:181588"
misc_feature complement(463274..463702)
/locus_tag="Halhy_0365"
/note="Haloacid dehalogenase-like hydrolases. The haloacid
dehalogenase-like (HAD) superfamily includes L-2-haloacid
dehalogenase, epoxide hydrolase, phosphoserine
phosphatase, phosphomannomutase, phosphoglycolate
phosphatase, P-type ATPase, and many others; Region:
HAD_like; cd01427"
/db_xref="CDD:119389"
misc_feature complement(order(463556..463561,463685..463693))
/locus_tag="Halhy_0365"
/note="active site"
/db_xref="CDD:119389"
misc_feature complement(463676..463693)
/locus_tag="Halhy_0365"
/note="motif I; other site"
/db_xref="CDD:119389"
misc_feature complement(463559..463561)
/locus_tag="Halhy_0365"
/note="motif II; other site"
/db_xref="CDD:119389"
gene complement(463740..464108)
/locus_tag="Halhy_0366"
/db_xref="GeneID:10584522"
CDS complement(463740..464108)
/locus_tag="Halhy_0366"
/note="IMG reference gene:2504769721"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004445151.1"
/db_xref="GI:332662363"
/db_xref="GeneID:10584522"
/translation="MLRLMDKTDIFVMHFIKNNDVMAFSIDNMNLKYIIDETGEKTEV
VIPIEVWTEIRAILELDVLKQKLKKAFQDVEAIEKGELPEVTLSEFLKNDLTEAFQEM
HDMKNGLKPRLSFNDVIDEL"
gene complement(464298..465626)
/locus_tag="Halhy_0367"
/db_xref="GeneID:10584523"
CDS complement(464298..465626)
/locus_tag="Halhy_0367"
/note="InterPro IPR003663:IPR005828;
KEGG: sli:Slin_3184 sugar transporter;
PFAM: General substrate transporter;
SPTR: Sugar transporter;
TIGRFAM: Sugar/inositol transporter;
IMG reference gene:2504769722;
PFAM: Sugar (and other) transporter;
TIGRFAM: MFS transporter, sugar porter (SP) family"
/codon_start=1
/transl_table=11
/product="sugar transporter"
/protein_id="YP_004445152.1"
/db_xref="GI:332662364"
/db_xref="InterPro:IPR003663"
/db_xref="InterPro:IPR005828"
/db_xref="InterPro:IPR005829"
/db_xref="InterPro:IPR016196"
/db_xref="InterPro:IPR020846"
/db_xref="GeneID:10584523"
/translation="MNRKIIVWSVTVALGGFLFGLDTAVISGAEQAIQKLWSLNDFWH
GTAVAMALYGTVFGAALGGWPSDAIGRKRTLFWIGIMYFVSALGSALATDVNTFMVFR
FIGGLGVGASSVAAPLYISEISPAKSRGQLVAIFQFNIVLGILIAYVSNYALQGIGGE
EAWRWMLGVVAIPSVAFIVFVLFVPESPRWLIVKRNEEVEARKVLAIINPGLVDESVA
AIRASVHQEVGKRVERFFSKKYAWPILLAFLIALFNQVSGINAVIYYAPRIFKLAGQE
ASTALLSSAGIGLANLVFTLIGVTLIDRFGRKFLMYIGSIGYIISLSLIANAFFSENY
TGITYFLFAFIAAHAIGQGAVIWVFISEIFPNQVRAAGQSFGSFTHWIFAALIANVFP
LFANDSSSGTGSIFLFFTAMMVLQLLFVAFMMPETKGVALEDMEKRIVGH"
misc_feature complement(464316..465623)
/locus_tag="Halhy_0367"
/note="D-xylose transporter XylE; Provisional; Region:
xylE; PRK10077"
/db_xref="CDD:182225"
misc_feature complement(<465072..465599)
/locus_tag="Halhy_0367"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
misc_feature complement(order(465195..465197,465213..465218,
465225..465230,465264..465266,465273..465278,
465285..465290,465297..465302,465438..465443,
465447..465452,465462..465464,465471..465476,
465483..465485,465534..465539,465543..465551,
465558..465560))
/locus_tag="Halhy_0367"
/note="putative substrate translocation pore; other site"
/db_xref="CDD:119392"
misc_feature complement(464355..>464903)
/locus_tag="Halhy_0367"
/note="The Major Facilitator Superfamily (MFS) is a large
and diverse group of secondary transporters that includes
uniporters, symporters, and antiporters. MFS proteins
facilitate the transport across cytoplasmic or internal
membranes of a variety of...; Region: MFS; cd06174"
/db_xref="CDD:119392"
gene complement(465742..466458)
/locus_tag="Halhy_0368"
/db_xref="GeneID:10584524"
CDS complement(465742..466458)
/locus_tag="Halhy_0368"
/note="InterPro IPR006869;
KEGG: rbi:RB2501_08750 hypothetical protein;
PFAM: Protein of unknown function DUF547;
SPTR: uncharacterized protein;
IMG reference gene:2504769723;
PFAM: Protein of unknown function, DUF547"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004445153.1"
/db_xref="GI:332662365"
/db_xref="InterPro:IPR006869"
/db_xref="GeneID:10584524"
/translation="MYKASLFFSLLLGAIFLIPTALPADPPSHEVWDALLKKYVSATG
KVNYKGIKADKTKLEDYLKTLSSNAPESSWSKPEQMAFWINAYNAFTVKLIVDNYPLA
SINKLHGGKPWDHKWIKIGGKTYSLNNLENDILRPQFKDARIHFAVNCAAKSCPPLLN
TAWTASNLNANLDAQAKKFINNPVFNKLSDKKVEVSKIFEWYAEDFGKIIDFLNKYAS
TKVSAKAKVSYVEYDWALNE"
misc_feature complement(465919..466245)
/locus_tag="Halhy_0368"
/note="Protein of unknown function, DUF547; Region:
DUF547; pfam04784"
/db_xref="CDD:191092"
gene complement(466499..467218)
/locus_tag="Halhy_0369"
/db_xref="GeneID:10584525"
CDS complement(466499..467218)
/locus_tag="Halhy_0369"
/note="InterPro IPR008884;
KEGG: tcu:Tcur_2577 macrocin-O-methyltransferase
domain-containing protein;
PFAM: Macrocin-O-methyltransferase;
SPTR: Macrocin-O-methyltransferase;
IMG reference gene:2504769724;
PFAM: Macrocin-O-methyltransferase (TylF)"
/codon_start=1
/transl_table=11
/product="macrocin-O-methyltransferase"
/protein_id="YP_004445154.1"
/db_xref="GI:332662366"
/db_xref="InterPro:IPR008884"
/db_xref="GeneID:10584525"
/translation="MKKIGLGALIPNGNKYHRNVDDIDPEFFPLYEAVKPYTMTNLER
LYSLYKAVEYVCNRSLEGDFVECGVWKGGSSMMMALTLQKFGQTHRKLYLYDTFSGMT
PPSADDITIDGEDANKLYETTEDWCSAGLTEVKNNMAKTGYPAQNVFFVEGMVETTIP
GTLPGKLAILRLDTDWYDSTYHEMTHLYPLLEKTGVLIIDDYGYWKGSKKAIDQYFAE
QNQNLLLLRTDEGGGRIALKV"
misc_feature complement(466565..>467107)
/locus_tag="Halhy_0369"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cl16911"
/db_xref="CDD:213141"
gene 467351..468835
/locus_tag="Halhy_0370"
/db_xref="GeneID:10584526"
CDS 467351..468835
/locus_tag="Halhy_0370"
/note="COGs: COG2244 Membrane protein involved in the
export of O-antigen and teichoic acid;
InterPro IPR002797;
KEGG: mtt:Ftrac_0897 polysaccharide biosynthesis protein;
PFAM: Polysaccharide biosynthesis protein;
SPTR: Polysaccharide biosynthesis protein;
IMG reference gene:2504769725;
PFAM: Polysaccharide biosynthesis protein"
/codon_start=1
/transl_table=11
/product="polysaccharide biosynthesis protein"
/protein_id="YP_004445155.1"
/db_xref="GI:332662367"
/db_xref="InterPro:IPR002797"
/db_xref="GeneID:10584526"
/translation="MGVIKRQAFKTSLASFIGVAIGVLSTLFIYTKVFNEGQNGQINF
IQTAPLLLVTFASLGLGNLVVRFFPMFSGPKNQHGYLGLLMLILLAGVSLYFVLSLSL
FNFLPPKYRAEYGLISAMVVIIGFRDLFTTYAQNFRRTTMPAVIDTIFLKAGIPILAI
AYFLEWLSFRQVLTAVVGLYAIVAISLAIYIYRLGHFHLNFQWKFLAEKKALLREMAF
YALYGVLGAAGGVIALQINSVMITELIGYKSNGIYTIVNVMANVIAIPYMSMINVTAP
IAGDHIRHERWDQVADLYRRSSINLLIMGTFILLGLWSCLDYVFELMPNGERYAVGKY
VILFAGIGKLFDMATSINGRIIGFTKYYWIGFYTILFLAVLTVSLNWVLIPMYNIEGA
AFGTMLSSLLFNLVCVLFVWVKFKIQPFNVKSLLVIVLGIGLWGLTKLIPDFGNPILD
IAFNALFITLFYTIAVLKFRLSEDLNEFYRQILFRIKRRNFKFW"
misc_feature 467360..468592
/locus_tag="Halhy_0370"
/note="Membrane protein involved in the export of
O-antigen and teichoic acid [General function prediction
only]; Region: RfbX; COG2244"
/db_xref="CDD:32425"
gene 468837..469616
/locus_tag="Halhy_0371"
/db_xref="GeneID:10584527"
CDS 468837..469616
/locus_tag="Halhy_0371"
/note="InterPro IPR013217;
KEGG: ant:Arnit_2548 type 12 methyltransferase;
PFAM: Methyltransferase type 12;
SPTR: 3-demethylubiquinone-9 3-methyltransferase;
IMG reference gene:2504769726;
PFAM: Methyltransferase domain"
/codon_start=1
/transl_table=11
/product="type 12 methyltransferase"
/protein_id="YP_004445156.1"
/db_xref="GI:332662368"
/db_xref="InterPro:IPR013217"
/db_xref="GeneID:10584527"
/translation="MADKITFSFGENWSAYKKKASPEQFDASLEDLETWLGTENIKGK
RILDIGCGSGVHSYNFYRLGAKELTSFDYDVHSVNTTREFWKEAKEPSNWTVFQGSVL
DEKLMAGLGKYDIVYSWGVLHHTGSMWQAIYNAIQTVADGGLFWIAIYQGVDTYEYDL
ELKKRYNNASWLGKKAMVWYRILRKIKTQLSRRENPFAWNKKNERGMDVYHDIIDWLG
GLPYEVASVAQIKAFCEPEGLQLLKVDTSEGCAVYLFKKTD"
misc_feature 468960..469391
/locus_tag="Halhy_0371"
/note="Methyltransferase domain; Region: Methyltransf_31;
pfam13847"
/db_xref="CDD:206018"
misc_feature 468969..469286
/locus_tag="Halhy_0371"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cd02440"
/db_xref="CDD:100107"
misc_feature order(468981..469001,469050..469055,469131..469139,
469191..469193)
/locus_tag="Halhy_0371"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
gene 469629..470834
/locus_tag="Halhy_0372"
/db_xref="GeneID:10584528"
CDS 469629..470834
/locus_tag="Halhy_0372"
/note="COGs: COG0438 Glycosyltransferase;
InterPro IPR001296;
KEGG: cyc:PCC7424_4246 glycosyl transferase group 1;
PFAM: Glycosyl transferase, group 1;
SPTR: Glycosyl transferase group 1;
IMG reference gene:2504769727;
PFAM: Glycosyl transferases group 1"
/codon_start=1
/transl_table=11
/product="group 1 glycosyl transferase"
/protein_id="YP_004445157.1"
/db_xref="GI:332662369"
/db_xref="InterPro:IPR001296"
/db_xref="GeneID:10584528"
/translation="MKIALVTTEYVTELKGAGGLANYLYRLALALKEMGHEPYVFTYA
RADAQVEDAGIPVYRMKVKNYGVELLDYTTVKLWSKALHIIYPAWKMSRLLRRVARTE
KFDIIQYAQLSALGLFPLKNIPAVVRISSHTGLWKKHGGYAENWRQIKQQEALEMKAC
QRADGVFGPSRFIAALFEKELQRRVKIIETPFFSQHVQIDPGLYQTHLAGKSYWLFFG
TLSEHKGLKVIAAMLPDFLRKYPDFHFVLAGREVDIAPGLGAMDYLRQQVGNEVLLQR
VLYLGQIKHEQLFPIIQGAFGVTLPSLADNFPNACLEAMAWGKVVIGTFGNGFDQLIE
QGESGFLVEAGKASALLEAMETVMLLPNAQKKAMENAAQQRIELLRPAIKVKELINYY
LEIIAKHQQ"
misc_feature 469632..470804
/locus_tag="Halhy_0372"
/note="This family is most closely related to the GT1
family of glycosyltransferases and named after YqgM in
Bacillus licheniformis about which little is known.
Glycosyltransferases catalyze the transfer of sugar
moieties from activated donor molecules to...; Region:
GT1_YqgM_like; cd03801"
/db_xref="CDD:99974"
misc_feature 469731..470825
/locus_tag="Halhy_0372"
/note="Glycosyltransferase [Cell envelope biogenesis,
outer membrane]; Region: RfaG; COG0438"
/db_xref="CDD:30787"
gene 470845..471636
/locus_tag="Halhy_0373"
/db_xref="GeneID:10584529"
CDS 470845..471636
/locus_tag="Halhy_0373"
/note="COGs: COG2226 Methylase involved in
ubiquinone/menaquinone biosynthesis;
InterPro IPR013216;
KEGG: nwa:Nwat_2536 methyltransferase type 11;
PFAM: Methyltransferase type 11;
SPTR: Methyltransferase type 11;
IMG reference gene:2504769728;
PFAM: Methyltransferase domain"
/codon_start=1
/transl_table=11
/product="type 11 methyltransferase"
/protein_id="YP_004445158.1"
/db_xref="GI:332662370"
/db_xref="InterPro:IPR013216"
/db_xref="GeneID:10584529"
/translation="MLDFLHWVRDMEFDLIFAKAGIDLSDKRLLEIGAGSGYQLAKLQ
KITREALGVDIFESNYAEVRSANVVLYDGHHLPFADQSFDVIFSSNTLEHIPHLEEIH
REFKRVLKPGGLCLHVVPTHHWKLRQLVGFYLLLPAMLWRRFFPSTKQTPSQAVEAAV
LQTPEVTSNQGSKSIGQKLRNLFLPEHHGERGNVFSEYFYFRPRWWEKHFEDNNWTIL
KNEGLGLFYSPYAFLGQKLSASQRMQWSKWWGSSCQLFLIKPKEE"
misc_feature 470845..471501
/locus_tag="Halhy_0373"
/note="SAM-dependent methyltransferases [Secondary
metabolites biosynthesis, transport, and catabolism /
General function prediction only]; Region: SmtA; COG0500"
/db_xref="CDD:30846"
misc_feature 470926..471186
/locus_tag="Halhy_0373"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cd02440"
/db_xref="CDD:100107"
misc_feature order(470938..470958,471004..471009,471055..471063,
471109..471111)
/locus_tag="Halhy_0373"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
gene 471639..473498
/locus_tag="Halhy_0374"
/db_xref="GeneID:10584530"
CDS 471639..473498
/locus_tag="Halhy_0374"
/note="COGs: COG0367 Asparagine synthase
(glutamine-hydrolyzing);
InterPro IPR006426:IPR000583:IPR001962;
KEGG: dar:Daro_2408 asparagine synthase,
glutamine-hydrolyzing;
PFAM: Asparagine synthase; Glutamine amidotransferase,
class-II;
PRIAM: Asparagine synthase (glutamine-hydrolyzing);
SPTR: Asparagine synthase, glutamine-hydrolyzing;
TIGRFAM: Asparagine synthase, glutamine-hydrolyzing;
IMG reference gene:2504769729;
PFAM: Asparagine synthase;
TIGRFAM: asparagine synthase (glutamine-hydrolyzing)"
/codon_start=1
/transl_table=11
/product="asparagine synthase"
/protein_id="YP_004445159.1"
/db_xref="GI:332662371"
/db_xref="InterPro:IPR001962"
/db_xref="InterPro:IPR014729"
/db_xref="InterPro:IPR017932"
/db_xref="GeneID:10584530"
/translation="MCGITGLLRKDRPIEDAELLAMTAAIKHRGPDGHGFWYDSNHRI
GFGHRRLALIDLLGGAQPMYDDTRKIQLVFNGEIYNYQQLRQELQGYGHHFSTNSDTE
AIIYAYKQWGTDCVKRLRGMFALVLADDNKRELFLARDHFGIKPMYYYEDENCFAFGS
EIQAIKALPGIQLDINWSAIDQYLWLQYIPHPQTAFHKLKKLPPAHTLTIGFDGKMGT
PQPYWHFEFKPETGKTEQDWLEELDATLRDSVQAHLLADVPFGAFLSGGIDSSLVVSY
MAEHLSSPVKTFSIGFKEEKYNELAYAAEVAKKWGTEHHVEIVEPQGLDILPDLVRHY
GEPFADSSAIPTWYVSRLARRNVTMTLTGDGGDELFAGYGRYVQFAEQQELLPLNRKK
IKSFLYPFINPIDPYKFPNNVAFWEGKSLRNLMEYIRIVPFELRKRLWKPDYAQYLQY
TPPLFASTYAAAQHLSPTNLFQQVDINTYLPLDILTKVDVASMMHSLEVRPPIIDVRV
AETAARIPTAFNLAKVNGKYEGKILLKKLLNRHFSHDFVYREKKGFAVPLEFWFGQKG
NHQAYLREKLLSQDSMLKEVFNQRTIEKMLPHRHFSYSIWALLILEEWLRQNR"
misc_feature 471639..473489
/locus_tag="Halhy_0374"
/note="exosortase A system-associated amidotransferase 1;
Region: eps_aminotran_1; TIGR03108"
/db_xref="CDD:132152"
misc_feature 471642..472310
/locus_tag="Halhy_0374"
/note="Glutamine amidotransferases class-II (GATase)
asparagine synthase_B type. Asparagine synthetase B
catalyses the ATP-dependent conversion of aspartate to
asparagine. This enzyme is a homodimer, with each monomer
composed of a glutaminase domain and a...; Region: AsnB;
cd00712"
/db_xref="CDD:48476"
misc_feature order(471642..471644,471786..471788,471861..471869,
471936..471938)
/locus_tag="Halhy_0374"
/note="active site"
/db_xref="CDD:48476"
misc_feature order(471687..471689,471708..471710,471717..471719,
471726..471740,471783..471785)
/locus_tag="Halhy_0374"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:48476"
misc_feature 472365..473309
/locus_tag="Halhy_0374"
/note="The C-terminal domain of Asparagine Synthase B.
This domain is always found associated n-terminal
amidotransferase domain. Family members that contain this
domain catalyse the conversion of aspartate to asparagine.
Asparagine synthetase B catalyzes the...; Region:
Asn_Synthase_B_C; cd01991"
/db_xref="CDD:30178"
misc_feature order(472425..472433,472506..472514,472683..472685,
472722..472730)
/locus_tag="Halhy_0374"
/note="Ligand Binding Site [chemical binding]; other site"
/db_xref="CDD:30178"
misc_feature order(472425..472433,472506..472514,472683..472685,
472722..472730)
/locus_tag="Halhy_0374"
/note="Molecular Tunnel; other site"
/db_xref="CDD:30178"
gene 473501..474754
/locus_tag="Halhy_0375"
/db_xref="GeneID:10584531"
CDS 473501..474754
/locus_tag="Halhy_0375"
/note="COGs: COG0438 Glycosyltransferase;
InterPro IPR001296;
KEGG: cyt:cce_2362 glycosyl transferase, group I;
PFAM: Glycosyl transferase, group 1;
SPTR: glycosyl transferase, group I;
IMG reference gene:2504769730;
PFAM: Glycosyl transferases group 1"
/codon_start=1
/transl_table=11
/product="group 1 glycosyl transferase"
/protein_id="YP_004445160.1"
/db_xref="GI:332662372"
/db_xref="InterPro:IPR001296"
/db_xref="GeneID:10584531"
/translation="MKPGKKIMFLVQDRPNWTGGPIINVRRLLPAWKAAGYDVIAPTG
YREDAPNARFLETKGIPCPLFKMPASTEDYTAWILEQVALHQPDVFIGDTHVAAGYAL
PWLSAWGIPSVMMVRNLDAYNLEVAYAFFGKNSARNASALVCVNARIVEEILKTNPLH
PDRIRVIPSGAPASPYQAAWPNAGAFHLVYAGVLMEERKRVLKLWEAYCYALEQLPDL
QLTFIGDGPLRPQLEQLVVDAGLQAQVSFTGVLLDDAYKLKLSQQQILLLFSDHEGTP
GSVMDAMSCGVVPLCRNMEGIQNLVHHGDNGLIFDGSKEDFVVQLKKMREEQFWKQRS
AAALRDFTEQFSLDTTLARWQDLLEELLSKPLPKSAIKVPARVSLPPVRYHFANADRR
KHPWYALLRGVYIIWGRIMRGRQTN"
misc_feature 473513..474568
/locus_tag="Halhy_0375"
/note="Glycosyltransferase [Cell envelope biogenesis,
outer membrane]; Region: RfaG; COG0438"
/db_xref="CDD:30787"
misc_feature 473516..474559
/locus_tag="Halhy_0375"
/note="This family is most closely related to the GT1
family of glycosyltransferases and named after YqgM in
Bacillus licheniformis about which little is known.
Glycosyltransferases catalyze the transfer of sugar
moieties from activated donor molecules to...; Region:
GT1_YqgM_like; cd03801"
/db_xref="CDD:99974"
gene complement(475624..477078)
/locus_tag="Halhy_0376"
/db_xref="GeneID:10584532"
CDS complement(475624..477078)
/locus_tag="Halhy_0376"
/note="COGs: COG1262 conserved hypothetical protein;
InterPro IPR005532;
KEGG: cts:Ctha_2336 hypothetical protein;
PFAM: Sulphatase-modifying factor;
SPTR: uncharacterized protein;
IMG reference gene:2504769731;
PFAM: Formylglycine-generating sulfatase enzyme"
/codon_start=1
/transl_table=11
/product="sulfatase-modifying factor protein"
/protein_id="YP_004445161.1"
/db_xref="GI:332662373"
/db_xref="InterPro:IPR005532"
/db_xref="InterPro:IPR009003"
/db_xref="InterPro:IPR016187"
/db_xref="GeneID:10584532"
/translation="MKSSTLNTTPFCYPQSNFWRGSLALLLLFWSTLMSAQDPISPVT
ESLKPNVVAIKASFADGTEEKGFGFITAEQNGRLFLATAAHVVRGPDKDKSAQHIRVK
FLNDISWYPATFKAQWDKEDLALLELPKPSFVQWQPNCADFAPGTYRKVHFIGLNGNE
PRWVDPGLDGNIFEDKDHELNFAIGTIRPGTSGAPLITEMGIVGLITQDEGGISTALK
LTQIKTLFSGGGQYPYFALQLLGGVVTPPPINTNVPVNVPQADEYGLVLVKGGTFTMG
CTSEQGSDCYDDEKTTHRVILSDFHIGKYEVTQAQWRKVMGSDPPNLYFKGCDQCPVE
GVSWEDIQKFLRKLNAQTGKIYRLPTEAEWEYAARGGNQSKGYKYAGSNSFTDVAWFE
DNSGNKPHPVGTKKANELGLYDMSGNVWEWCQDWYSDYSSNTQTNPTGAGSGSYRVYR
GGNWFLDEWACRVSYRNYSTSGAHYKYLGFRLAL"
misc_feature complement(476464..476883)
/locus_tag="Halhy_0376"
/note="Trypsin-like peptidase domain; Region: Trypsin_2;
pfam13365"
/db_xref="CDD:205544"
misc_feature complement(475630..476289)
/locus_tag="Halhy_0376"
/note="Uncharacterized conserved protein [Function
unknown]; Region: COG1262"
/db_xref="CDD:31454"
misc_feature complement(475630..476289)
/locus_tag="Halhy_0376"
/note="Formylglycine-generating sulfatase enzyme; Region:
FGE-sulfatase; pfam03781"
/db_xref="CDD:190747"
gene complement(477403..478173)
/locus_tag="Halhy_0377"
/db_xref="GeneID:10584533"
CDS complement(477403..478173)
/locus_tag="Halhy_0377"
/note="InterPro IPR013216;
KEGG: mca:MCA2546 hypothetical protein;
PFAM: Methyltransferase type 11;
SPTR: Conserved domain protein;
IMG reference gene:2504769732;
PFAM: Methyltransferase domain"
/codon_start=1
/transl_table=11
/product="type 11 methyltransferase"
/protein_id="YP_004445162.1"
/db_xref="GI:332662374"
/db_xref="InterPro:IPR013216"
/db_xref="GeneID:10584533"
/translation="MCTLNNAMQNTAAWQASKFITSTRQQGRWIPNQQHVYPGSWFII
SVYIDLYVATIQQYARGKLLDLGAGMVPFYGMYKDKISENVCIDWANSLHANPHLDVV
ADLNQPFPLPDDTFDSILCSDVLEHIADPFAFMRETARVLKPGGDLMLMVPFFYWLHE
TPHDYYRYTEFALRKMCADNQLEVLELKAYGGYPDVLLDLMSKGLGRNKRLAGPFFRL
AKALASTRVYQKLRAKTADRFPLGYCLVARKGEVIGQG"
misc_feature complement(477619..477999)
/locus_tag="Halhy_0377"
/note="Methyltransferase domain; Region: Methyltransf_23;
pfam13489"
/db_xref="CDD:205667"
misc_feature complement(477709..477990)
/locus_tag="Halhy_0377"
/note="S-adenosylmethionine-dependent methyltransferases
(SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
that use S-adenosyl-L-methionine (SAM or AdoMet) as a
substrate for methyltransfer, creating the product
S-adenosyl-L-homocysteine (AdoHcy); Region: AdoMet_MTases;
cd02440"
/db_xref="CDD:100107"
misc_feature complement(order(477808..477810,477859..477867,
477907..477912,477961..477963,477964..477978))
/locus_tag="Halhy_0377"
/note="S-adenosylmethionine binding site [chemical
binding]; other site"
/db_xref="CDD:100107"
gene 478335..481409
/locus_tag="Halhy_0378"
/db_xref="GeneID:10584534"
CDS 478335..481409
/locus_tag="Halhy_0378"
/note="KEGG: lby:Lbys_0384 hypothetical protein;
SPTR: uncharacterized protein;
IMG reference gene:2504769733"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004445163.1"
/db_xref="GI:332662375"
/db_xref="GeneID:10584534"
/translation="MKIKLLGLLICLSYTIFTNAQVSVFNAPSVNISPAKIFASKETP
GDFRIVYTAPNSFGVFTFRNGTILSNNTLHIGSTAQELPLGLLEVAPNDFLIHGTSWA
RTGNFATSVLRLRNERLQWAKGFSICDDFTNIGFFSGIAQRDSSIIVSGSSRNTACGL
PDLDFSAVKLNFQGAVQSQVSFIPSNGPSTEGMFFLQPHNRIFYYGGFSTVAPCGGGN
LQRPGLGTFDANLQNRRWWTYDGVGFELNGAIYQAHPLPSNPNRLVCNVRFSPDACAD
TPVGLGLFVVDSLGNPVSAVRFRTSNVNDLLTSRYSQVVLNDGSIVFLGRVTPTNGPP
REFLLRTSSAGNILFSKTIEPSNPADRVTFEDLVVDGQKIILVGKLQTSGNENFIVLQ
TDLNGVFPSGNNCLVSKDLSLTTQNLSIRKTNQSLVEIQNMTSYDIPYRFSKERVSDV
SCAICQSGNFPISAKVEGICGNTCSGRIELQGRDSSAYTYLWSNGRSNASIGGLCAGN
YSVTISANGGCVRDTSFTIASFTPPQLNLPTTFRGTLGDSLRILAIINSPNGPITTYR
WQPKNPLNASTCLSCSTLGILVQARDSIFLQIEDVQGCTAEGFTLLEVFTPFRFNARA
DTTCFNTCQGVINLAGITDTTGFSFNWSNGQRTANLSGLCAGRYTVTATDANGITRDT
SIVVGATTSIRLSPETVNTCINECKGILRMNPVGGEGRLNFLWNTGATTSSITALCAG
NYVITITDAKGCLVEDTFAVGSSSLNFTLQLADLDCSTPPSASIRVDSLLGGQSPYTY
AINGGNFAALNRFSNVMAGQRYTISVKDANQCQLSKEIAIPALTPIVLSLPSLAPLPF
GDTVLVVPVITSGGSALTYAWRVRKGDNLLSCTDCPATTLTGIVNDTLSLFLRDEQGC
EASAFTLLQVFDNTKMYIPNVFSPNNDQKNDIFTVFGEPGTGGVLLMRIFGRWGELVY
EGANFDLNDLAKGWDGTFRGKPANPGVYVYVIEIQYRSGARALFKGDLHLLR"
misc_feature 481125..481400
/locus_tag="Halhy_0378"
/note="C-terminal domain of CHU protein family; Region:
CHU_C; pfam13585"
/db_xref="CDD:205763"
STS 478865..479108
/locus_tag="Halhy_0378"
/standard_name="D1S3694"
/db_xref="UniSTS:474272"
gene 481595..482749
/locus_tag="Halhy_0379"
/db_xref="GeneID:10584535"
CDS 481595..482749
/locus_tag="Halhy_0379"
/note="COGs: COG0438 Glycosyltransferase;
InterPro IPR001296;
KEGG: syx:SynWH7803_0227 glycosyl transferase;
PFAM: Glycosyl transferase, group 1;
SPTR: Glycosyl transferase, group 1;
IMG reference gene:2504769734;
PFAM: Glycosyl transferases group 1"
/codon_start=1
/transl_table=11
/product="group 1 glycosyl transferase"
/protein_id="YP_004445164.1"
/db_xref="GI:332662376"
/db_xref="InterPro:IPR001296"
/db_xref="GeneID:10584535"
/translation="MERNVAIVTPLIPTYSETFLRAHIELLPFNMHHFYALPKMGYHP
IYDGQGKPLFSDFKWFNYLETGIDRLFGETGIGYFFRKKAMSKYFHEHHIDALLVEYG
PTATYILDVCKQNKVPLIVHFHGRDAYHYKTLARFGKKYPALFDYAASIISVSADMSK
QLIALGAPAEKLVLNPCTPNTHLFNYQDIGNNPPVFITVGRFAAKKGPEYVIKAFGRV
VEQIPEAKMLMVGEGELWETCKQLSRDLGLSEKIEFLGSCAPTRVAELHHEARVFVQH
SRRAEDGDSEGTPVSVLEAMKSGLPVVSTRHAGIKDVVLEGETGFLVDEGDWEGMAEA
MIQLAKDPAMAAAMGKKGSTRANAHYTMEQHIQRLADAIQAAIDNKQVKV"
misc_feature 481604..482707
/locus_tag="Halhy_0379"
/note="Glycosyltransferases catalyze the transfer of sugar
moieties from activated donor molecules to specific
acceptor molecules, forming glycosidic bonds. The acceptor
molecule can be a lipid, a protein, a heterocyclic
compound, or another carbohydrate...; Region: GT1_like_7;
cd05844"
/db_xref="CDD:100003"
misc_feature 481664..482734
/locus_tag="Halhy_0379"
/note="Glycosyltransferase [Cell envelope biogenesis,
outer membrane]; Region: RfaG; COG0438"
/db_xref="CDD:30787"
misc_feature order(481718..481720,482189..482197,482381..482383,
482465..482467)
/locus_tag="Halhy_0379"
/note="putative ADP-binding pocket [chemical binding];
other site"
/db_xref="CDD:100003"
gene complement(482956..483354)
/locus_tag="Halhy_0380"
/pseudo
/db_xref="GeneID:10584536"
gene 483614..486085
/locus_tag="Halhy_0381"
/db_xref="GeneID:10584537"
CDS 483614..486085
/locus_tag="Halhy_0381"
/note="COGs: COG1198 Primosomal protein N' (replication
factor Y) - superfamily II helicase;
InterPro IPR005259:IPR011545:IPR001650:IPR014001;
KEGG: cpi:Cpin_6575 primosomal protein N';
PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal;
DNA/RNA helicase, C-terminal;
SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase,
C-terminal;
SPTR: Primosomal protein N';
TIGRFAM: Primosomal protein n;
IMG reference gene:2504769736;
PFAM: Helicase conserved C-terminal domain; Type III
restriction enzyme, res subunit;
TIGRFAM: primosomal protein N'"
/codon_start=1
/transl_table=11
/product="primosomal protein N'"
/protein_id="YP_004445165.1"
/db_xref="GI:332662377"
/db_xref="InterPro:IPR001650"
/db_xref="InterPro:IPR006935"
/db_xref="InterPro:IPR014021"
/db_xref="GeneID:10584537"
/translation="MSELHPTSDSNTYVTVILPMAVPKPYTYAVPEEWVSKVQVGVRV
EVQFGPKRQYAALVLEVLNTSPGHKTKSILSVIDDTPIIWAEQLRFWQWVGQYYCCTL
GEVMHAALPANLKLASETSITLSPLFEGDIMELEDRAYLIAEALTIQHELTLEQVRDI
LGIKTIYPLIRDLLDKRIIYLKEDLKEKFKAKTLACVRLREPYASQPETLQDAFDKLS
RATRQVEALMAFLQLARGQDYIRREELYKLAKVDSSVIQAMEKKGILEVYEREVSRIG
GYEDEIVEADVLSAQQERAIAEIHTQFEEKNVILLQGVTGSGKTRVYVELIREAMRRG
EQVLYLLPEIALTTQIIERLQRVFGDQVDVYHSRLNNNERVEIWNRAKEGKALVLGAR
SALFLPFRNLKLVIIDEEHDPSFKQQDPNPRYHGRDAGIYLAQLFGAKVLLGTATPSV
ESFYNTQVGKYGLVRMPERFGGLELPEVEIVDLKKALRAGSMQSHFSVTLLNEMKATL
ERGEQVILFQNRRGYAPVYKCSTCNWTCECIHCDVSLTYHKGQNNLKCHYCGYQTQLP
KACPACGGKQLIVQGFGTEKVEDELKIFLPDAKIGRMDLDTVRSKNAHTKIINDFEEG
RINVLVGTQMVTKGLDFEKVGLVGVLSADQLLQFPDFRAGERAFQLMLQVAGRAGRKH
KRGKVIIQSHNVANPVIKEVLDGDFKAFYSREIMERQEFFYPPFYRLIRITLKHKKPE
VVNAAAQKYGNFLRAKLGDRLRGPAVPYVGRVRSYFLIDFLIKLERNPQLIANTKDLI
AAADHFLLQEEGYSSVKIAVDVDPF"
misc_feature 484532..484957
/locus_tag="Halhy_0381"
/note="DEAD-like helicases superfamily. A diverse family
of proteins involved in ATP-dependent RNA or DNA
unwinding. This domain contains the ATP-binding region;
Region: DEXDc; cd00046"
/db_xref="CDD:28927"
misc_feature 484541..486079
/locus_tag="Halhy_0381"
/note="primosomal protein N'; Region: priA; TIGR00595"
/db_xref="CDD:161946"
misc_feature 484559..484573
/locus_tag="Halhy_0381"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:28927"
misc_feature 484835..484846
/locus_tag="Halhy_0381"
/note="putative Mg++ binding site [ion binding]; other
site"
/db_xref="CDD:28927"
misc_feature order(485357..485368,485423..485428,485507..485515)
/locus_tag="Halhy_0381"
/note="nucleotide binding region [chemical binding]; other
site"
/db_xref="CDD:28960"
misc_feature 485378..485659
/locus_tag="Halhy_0381"
/note="helicase superfamily c-terminal domain; Region:
HELICc; smart00490"
/db_xref="CDD:197757"
misc_feature order(485531..485533,485630..485632,485642..485644,
485651..485653)
/locus_tag="Halhy_0381"
/note="ATP-binding site [chemical binding]; other site"
/db_xref="CDD:28960"
gene 486222..487409
/locus_tag="Halhy_0382"
/db_xref="GeneID:10584538"
CDS 486222..487409
/locus_tag="Halhy_0382"
/note="KEGG: zpr:ZPR_0900 hypothetical protein;
SPTR: uncharacterized protein;
IMG reference gene:2504769737;
PFAM: Protein of unknown function (DUF2961)"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004445166.1"
/db_xref="GI:332662378"
/db_xref="InterPro:IPR021345"
/db_xref="GeneID:10584538"
/translation="MKPTILFLCTLFSCSLLAQDPLYRMSTDKPRWATFENPKAATGV
GGMENKTAKGHAYEPIKAGEVKTLLSVTGMGIVQRIWLTFNDRSSAMMRALRIDMYWD
GATQPAVSAPIGDFFGISHGQIMPFENALFSSPEGRSFNCRIPMPFRKGARITVTNES
DKELGLFFYDVDFQRVTALPPDALYFHAHWRREHKTELAKDFNMLPEVTGKGRFLGVN
VGLITAAEYGKSWWGEGEVKIYLDGDGQFPTIVGTGAEDYIGSGWGLGKFIQWYQGCP
IANDSTRQWSFYRFHIPDPIYFQQKLRATIQVLGGHSRDDVRRMLKEGTALIPVSLSH
DKGFVRLFEGNPPALDAADFPDGWVNFYRQEDYCATAYFYLDKPVNGLPALAAVQVRT
KGM"
misc_feature 486492..487142
/locus_tag="Halhy_0382"
/note="Protein of unknown function (DUF2961); Region:
DUF2961; pfam11175"
/db_xref="CDD:151617"
gene 487461..487982
/locus_tag="Halhy_0383"
/db_xref="GeneID:10584539"
CDS 487461..487982
/locus_tag="Halhy_0383"
/note="InterPro IPR007837;
KEGG: sli:Slin_3373 DinB family protein;
PFAM: DinB;
SPTR: DinB family protein;
IMG reference gene:2504769738;
PFAM: DinB family"
/codon_start=1
/transl_table=11
/product="DinB family protein"
/protein_id="YP_004445167.1"
/db_xref="GI:332662379"
/db_xref="InterPro:IPR007837"
/db_xref="GeneID:10584539"
/translation="MITLAALLLLTLTVHAQMADSIKVQFVRDWQRAKAYTKEYLDAM
PKDKYNYRAHDSIRTFGQQMLHLAQANAGLVANGTAANRIWMGKNLEQIPSIQSADSV
AHYVLTSYDYAITSISNMNPAILNERVKRGPFDISRYAWILKAFEHQTHHRGQTTIYI
RLLGIKPPNEKLF"
misc_feature 487533..487967
/locus_tag="Halhy_0383"
/note="Mycothiol maleylpyruvate isomerase N-terminal
domain; Region: MDMPI_N; cl00986"
/db_xref="CDD:207273"
misc_feature 487533..487925
/locus_tag="Halhy_0383"
/note="DinB superfamily; Region: DinB_2; pfam12867"
/db_xref="CDD:205116"
gene complement(488409..489935)
/locus_tag="Halhy_0384"
/db_xref="GeneID:10584540"
CDS complement(488409..489935)
/locus_tag="Halhy_0384"
/note="IMG reference gene:2504769739"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004445168.1"
/db_xref="GI:332662380"
/db_xref="GeneID:10584540"
/translation="MKSIYKWLVPGFLRRWDRVLLERYPVFWNTGAHFVLFYALLGAV
LLFGMGFLYPVHKDGENWVVDPIKPIELGYDNLYIYPLVMVLVCALLWVNRQFQAGFP
FYRLKHTLLTLLIYAGCFWLLIGVTASAFRIGTIVMVAKVWMNPDDLATIEKSGIYPY
GMMLLPQDTSFNIPLDTFHFFQIREQALKKRWFNEGEILNHRYKIDTVYWFKLFEGIS
LSDLSYRSYRSYRSPLSYLSFLSPLSYLSYLSYLSYLSDLSYRSYRSYLSYLLDRSDP
SYLLGLSDLSDLPYRSVYSALFDKEKFKKIDALALHYGISNKQDTFSKNPLVINRSLP
NQIEDGVRSVTHAQQFLKEKIFWWHFFRIGYFLLFLVSIFFFIPFLSLRDLLQVGIVA
FLAWFALSFFEITHAGEKVQFSKILNIGAYLILPIIGLGGLVWILFKKKQYRYFKICT
NMVFLGLALTLFGALNYGDNETLSQFGSPRDTAFYGAQLIGLIAACLVPYVQALPKKQ
"
gene complement(489919..491316)
/locus_tag="Halhy_0385"
/db_xref="GeneID:10584541"
CDS complement(489919..491316)
/locus_tag="Halhy_0385"
/note="COGs: COG1131 ABC-type multidrug transport system
ATPase component;
InterPro IPR003439:IPR003593;
KEGG: chu:CHU_1770 ABC transporter, ATP-binding protein;
PFAM: ABC transporter-like;
SMART: ATPase, AAA+ type, core;
SPTR: Probable ABC transporter, ;
IMG reference gene:2504769740;
PFAM: ABC transporter"
/codon_start=1
/transl_table=11
/product="ABC transporter"
/protein_id="YP_004445169.1"
/db_xref="GI:332662381"
/db_xref="InterPro:IPR003439"
/db_xref="GeneID:10584541"
/translation="MIPANDILQRRDEIIEFVSNAIFDSALNRLIDFTRDFYPLLSSD
AVKIKSSYSGIIKAELGGRLKFEEIQTGKAEIADRILKTLSLIPLNAQKPTDDSKIRE
IWKKVENGEEKNEALKKLKEIIGQMIKDNDAEDIQVRQAKKEILLKLAADLKLPNEVA
LKAEKITKKYTGSRFTLELDHLELRLGEITGLLGENATGKTTLFRILAGDLVPDSGIL
QYPLFAPRNKFFWPELKTKIAYVPQDLPVWLGSLEENLRFEAALHGIKDEDNQKAVAY
IVQRLGLVAHLDKSWAELSGGYKLRFALAKALVWNAQLLIIDEPLAFLDVKTQLIVLN
ALKNLASSLRHPIAIIVSSQHLHEIEAVADQMLFMRNGRLEHLGRTSDWGKERTENVF
EFSVPLAFAELSALLEGLPHFKLWNNGMSSFISTPLDISGQELLHFLATKQIPVSYFR
DISRSVKTKFYEEHL"
misc_feature complement(490087..490836)
/locus_tag="Halhy_0385"
/note="ABC-type Na+ transport system, ATPase component
[Energy production and conversion / Inorganic ion
transport and metabolism]; Region: NatA; COG4555"
/db_xref="CDD:34199"
misc_feature complement(490183..490836)
/locus_tag="Halhy_0385"
/note="P-loop containing Nucleoside Triphosphate
Hydrolases; Region: P-loop_NTPase; cl09099"
/db_xref="CDD:213113"
misc_feature complement(490714..490737)
/locus_tag="Halhy_0385"
/note="Walker A/P-loop; other site"
/db_xref="CDD:72971"
misc_feature complement(order(490255..490257,490360..490365,
490588..490590,490711..490719,490723..490728))
/locus_tag="Halhy_0385"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:72971"
misc_feature complement(490588..490599)
/locus_tag="Halhy_0385"
/note="Q-loop/lid; other site"
/db_xref="CDD:72971"
misc_feature complement(490408..490437)
/locus_tag="Halhy_0385"
/note="ABC transporter signature motif; other site"
/db_xref="CDD:72971"
misc_feature complement(490360..490377)
/locus_tag="Halhy_0385"
/note="Walker B; other site"
/db_xref="CDD:72971"
misc_feature complement(490342..490353)
/locus_tag="Halhy_0385"
/note="D-loop; other site"
/db_xref="CDD:72971"
misc_feature complement(490249..490269)
/locus_tag="Halhy_0385"
/note="H-loop/switch region; other site"
/db_xref="CDD:72971"
gene complement(491894..493060)
/locus_tag="Halhy_0386"
/db_xref="GeneID:10584542"
CDS complement(491894..493060)
/locus_tag="Halhy_0386"
/note="COGs: COG1929 Glycerate kinase;
InterPro IPR004381;
KEGG: sli:Slin_1926 glycerate kinase;
PFAM: Glycerate kinase;
PRIAM: Glycerate kinase;
SPTR: Glycerate kinase;
TIGRFAM: Glycerate kinase;
IMG reference gene:2504769741;
PFAM: Glycerate kinase;
TIGRFAM: glycerate kinase"
/codon_start=1
/transl_table=11
/product="glycerate kinase"
/protein_id="YP_004445170.1"
/db_xref="GI:332662382"
/db_xref="InterPro:IPR004381"
/db_xref="InterPro:IPR018193"
/db_xref="GeneID:10584542"
/translation="MKILIAADSFKDALPAQQVCAAIADGVKQVQPDAEVVIFPLTDG
GEGLAEVFAHHLGGIPVHLNAYDPLGRDVQCTYILSANGDKAFIEMAQASGLQRLSEE
ERNPMLTSTYGTGQMIAHALDSGVRHILLGLGGSATNDAGMGMAAALGFEFHTAKGKE
LLPRGESLIAIEKIEIGNAHPALAETRFEVLCDVKNPLYGKMGAAYVFGPQKGANASM
VERLDLGLQQFGGLLKKTFGQDFASPPGAGAAGGMGAACLAFLKGQLFPGIDAVMNLT
NFDAALEGADLVFTGEGRLDSQTLGGKLIRGICTRATQHGVPTIALCGAVDADQTFLD
LIGLKAAFAIGRKVQIFDDALASTEENLRFVAEQVMRVLSVGYKEYPVVDLKVG"
misc_feature complement(491933..493057)
/locus_tag="Halhy_0386"
/note="glycerate kinase; Region: TIGR00045"
/db_xref="CDD:161679"
gene complement(493189..493839)
/locus_tag="Halhy_0387"
/db_xref="GeneID:10584543"
CDS complement(493189..493839)
/locus_tag="Halhy_0387"
/note="InterPro IPR000835;
KEGG: phe:Phep_2094 regulatory protein MarR;
PFAM: HTH transcriptional regulator, MarR;
SMART: HTH transcriptional regulator, MarR;
SPTR: Transcriptional regulator, MarR family;
IMG reference gene:2504769742"
/codon_start=1
/transl_table=11
/product="regulatory protein MarR"
/protein_id="YP_004445171.1"
/db_xref="GI:332662383"
/db_xref="InterPro:IPR000835"
/db_xref="InterPro:IPR011991"
/db_xref="GeneID:10584543"
/translation="MSYDLLKQVIGLLEDFEQETGNKDLTAFSEWLYQRQRGAQEEAE
IPRTRWDDYPENIDVHIAMSIGGLNAHAKHYIKTALKDSELKGMHDFTFLATLVDQGD
LRKTDLIALNMLEFSPGMEVIRRLLRNGFIEDYDNPEDGRSRRVSITAAGKAVFFSAM
QNIQKVNRIVVGNLTEAEKQVVLNKLRKLMAFHQPIWDNEYGEDLEKIMEKHILGA"
misc_feature complement(493267..493638)
/locus_tag="Halhy_0387"
/note="Transcriptional regulators [Transcription]; Region:
MarR; COG1846"
/db_xref="CDD:32031"
misc_feature complement(493384..493587)
/locus_tag="Halhy_0387"
/note="Winged helix DNA-binding domain; Region: HTH_27;
pfam13463"
/db_xref="CDD:205641"
gene 493939..496365
/locus_tag="Halhy_0388"
/db_xref="GeneID:10584544"
CDS 493939..496365
/locus_tag="Halhy_0388"
/note="InterPro IPR012910:IPR000531;
KEGG: pdi:BDI_3481 TonB dependent outer membrane protein;
PFAM: TonB-dependent receptor, plug; TonB-dependent
receptor, beta-barrel;
SPTR: ferric aerobactin receptor;
IMG reference gene:2504769743;
PFAM: TonB-dependent Receptor Plug Domain; TonB dependent
receptor"
/codon_start=1
/transl_table=11
/product="TonB-dependent receptor plug"
/protein_id="YP_004445172.1"
/db_xref="GI:332662384"
/db_xref="InterPro:IPR000531"
/db_xref="InterPro:IPR008969"
/db_xref="InterPro:IPR012910"
/db_xref="InterPro:IPR014766"
/db_xref="GeneID:10584544"
/translation="MKLLHLTQLCKNWLLLILLIPGGLFAQNGIIKGKITDKASNEPI
PFANVLLIGTDNGTTTDENGIYEISGLAPGLYSIRVSFVGYEDANAFEIQVSNNKPAS
IDLALESSSQKLDEVVIKAPPFKKTEESPVSLRTIGVAEIQRNPGGNRDISKVVQTLP
GVTITPAFRNDLIIRGGAPNENRFFLDDVEVPNINHFATQGASGGPVGMINVNFINEV
DFFSGAFPANRGNAVSSVFNFRQRDGRDDRIGGTFMVSASDIGLTLEGPIGEKTTFLL
SARRSYLQFLFKIFELPFLPIYNDFQAKVKIRLDKKNELTFIGLGAYDQFELNLDANE
TEEQQSLLDRLPETPQWSYTNGLVYKHYRPNGYYTVVLSRNMLDNKAIKYYQNDRSRS
ENLILDYQSQEIENKLRLENTIRSGDYRINFGLGYEYVRYNNRTFNRIFTASGAQTVN
YNSAFNFSKYSAFGQLSRKFVDNRLTLSAGIRADGNSYSQEMSNLLEQLSPRFSASYS
LSKNLALNFNTGIFYQLPPYTILGYQQGGEFINKNNGIKYIRNNQLVAGLELNTNNNA
RITVEGFYKGYANYPFLLRDSLTLANLGGDFGVVGNEPALPQSKGRSYGLEFLFQQRL
FKGFYGIAAYTLGWSEFEDKNRVYVPSSWDARHILNLTLGKKLKKNWELGINWRFQSG
LPRTPFSDNSALVANWNVNGRGIPDYNQLNTERSEAINFLDFRVDKKWFFPQWSLNLY
FDIENMFSTSVASPELFLDRPLDADGRPIGSGVILNPDAAAEQQRYRTKILDNGTGRA
LPSIGLMIEW"
misc_feature 494029..494295
/locus_tag="Halhy_0388"
/note="Cna protein B-type domain; Region: Cna_B_2;
pfam13715"
/db_xref="CDD:205890"
misc_feature 494335..496014
/locus_tag="Halhy_0388"
/note="Porin superfamily. These outer membrane channels
share a beta-barrel structure that differ in strand and
shear number. Classical (gram-negative ) porins are
non-specific channels for small hydrophillic molecules and
form 16 beta-stranded barrels (16,20)...; Region:
OM_channels; cl01155"
/db_xref="CDD:213103"
gene 496725..499709
/locus_tag="Halhy_0389"
/db_xref="GeneID:10584545"
CDS 496725..499709
/locus_tag="Halhy_0389"
/note="COGs: COG1629 Outer membrane receptor protein
mostly Fe transport;
InterPro IPR012910:IPR000531;
KEGG: cpi:Cpin_5092 TonB-dependent receptor plug;
PFAM: TonB-dependent receptor, plug; TonB-dependent
receptor, beta-barrel;
SPTR: TonB-dependent receptor plug;
IMG reference gene:2504769744;
PFAM: TonB-dependent Receptor Plug Domain; TonB dependent
receptor;
TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA
subfamily, signature region; TonB-linked outer membrane
protein, SusC/RagA family"
/codon_start=1
/transl_table=11
/product="TonB-dependent receptor plug"
/protein_id="YP_004445173.1"
/db_xref="GI:332662385"
/db_xref="InterPro:IPR000531"
/db_xref="InterPro:IPR012910"
/db_xref="InterPro:IPR013784"
/db_xref="InterPro:IPR014766"
/db_xref="GeneID:10584545"
/translation="MTNLDTHSTSRVANKERFFFVLRPTLLLAAFVLALSSAFAQITL
SGTVTSEDKQALIGATVVVKGSGTGMVTDIDGKYTIEVPDRNAILVFSYTGFAEQEIT
VGSQTQIDIVLQVDIQRLNELVVVGYGSQKKRDVTGSVTNISDKDFIKGNIATPEQLV
NGKIAGVQITSNGGAPGAGSRIRIRGGSSLNANNDPLIVIDGVPLDNTGVSGAANPLS
FINPNDIENFTILKDASAAAIYGSRASNGVILITTKKGKAGDKMRISFSSVLSSSTRS
GVIDVLGAAEFRDTVNSRGTAAQKALLGNANTDWQDQIYQTAFSHDNNLSLTGALKNL
PYRASVGFMDQNGILKTSNMNRLSGSIGINPSFFDKHLKVDVNLKGTSINNRFANQGA
IGSAVNFDPTQPIRSGNEALGGYFEFLDPATKNPNTLAPRNPLALLNQRNDESTVGRI
IGNVVLDYKFHFLPELRANLNVGLDRSNSEGNINVPLGVAQFFDRGGQVATYTQNKNN
KTLEFYLNYVREFGIHRVDLMGGYSYQDFLRESTDLDKNIQGEVYNDVFFKTQNTLVS
FYTRVNYALKEKYLLTFTLRRDGSSRFSPDNRWGTFPSAAFAWKINEEGFMQGSNLFS
NLKLRLGYGVTGQQDVGSDYPYLSRYTPSEPTAQYQFGNDFFATLRPEGYDANIKWEQ
TETLNAGLDWANRNGRISGAIDVYSRKTKDLLSVIPVPAGSNLTNQILTNVGNIENSG
VEFTLNTRLIEKEKLSWDFGFNVTFNQNEVTNLTKVPNPNYQGVLVGGISGGVGNTLQ
IHTVGFPTFSYFVQKQVYDEGGKPVEGLYADLNGDGQVNLDDRYRYQQADPRLFLGIN
SQINIEDFSLSFVLRGNFDNYVYNNVVSNNGTYRGLTGTNNFLLNLSPNVLETGFLNN
QYFSDYYIENGSFLRLDNLTLGYNLKGLLGGTSNTQISLIGQNLFTITKYSGLDPEIA
GGIDNNVYPRPRILSFGLNVSF"
misc_feature 496848..499706
/locus_tag="Halhy_0389"
/note="TonB-linked outer membrane protein, SusC/RagA
family; Region: OMP_RagA_SusC; TIGR04056"
/db_xref="CDD:211898"
misc_feature 496851..497099
/locus_tag="Halhy_0389"
/note="Cna protein B-type domain; Region: Cna_B_2;
pfam13715"
/db_xref="CDD:205890"
misc_feature 497394..497486
/locus_tag="Halhy_0389"
/note="TonB-dependent outer membrane receptor, SusC/RagA
subfamily, signature region; Region: SusC_RagA_signa;
TIGR04057"
/db_xref="CDD:211899"
misc_feature <498120..499067
/locus_tag="Halhy_0389"
/note="Porin superfamily. These outer membrane channels
share a beta-barrel structure that differ in strand and
shear number. Classical (gram-negative ) porins are
non-specific channels for small hydrophillic molecules and
form 16 beta-stranded barrels (16,20)...; Region:
OM_channels; cl01155"
/db_xref="CDD:213103"
gene 499750..501342
/locus_tag="Halhy_0390"
/db_xref="GeneID:10584546"
CDS 499750..501342
/locus_tag="Halhy_0390"
/note="InterPro IPR012944;
KEGG: cpi:Cpin_5091 RagB/SusD domain protein;
PFAM: RagB/SusD;
SPTR: RagB/SusD domain protein;
IMG reference gene:2504769745;
PFAM: SusD family"
/codon_start=1
/transl_table=11
/product="RagB/SusD domain-containing protein"
/protein_id="YP_004445174.1"
/db_xref="GI:332662386"
/db_xref="InterPro:IPR012944"
/db_xref="GeneID:10584546"
/translation="MKKQFFNSSIKLGALAIFMVISSCTKDLDRIPFVEVTSATVYKD
FSNYKQILAKVYAGLAVSGQQGPAGRPDISGIDEGFSTYLRQYWKAQQLPTDEAVIGW
NDGSLPDYHDMDWTSGNEFITAMYNRIFYQITLCNEFIRETSDAKLGDRGISAENQTT
ARVFRAEARFLRALSYYHALDMFGNVPFVTEADAVGSFLPRQATRTELFSYVESELKA
IETELLDARKNEYGRADKGAAWALLAKLYLNAEVYIGAPKYTECITYCNKITAAGYTL
ESDYNKLFLTDNNKSAEMIFPITFDGTRTKTWGGMTFLVHAGVGGNMNPADFGINGGW
SGLRTTKALVEKFSDITGATDRRAMFHTNGQKLDISDIFTFNDGYAITKYRNVSSTGV
KGTDTEGNFPDTDFPLFRLADVYLTYAEAVLRNGQGGSQATALQYVNALRQRAYKGNT
GDVTSISLDFILDERARELYWEAHRRTDLIRFKKFTGSSYVWPWKGGTKDGRAVADHL
AIFPIPASDLVANPNLDQNSGY"
misc_feature 499981..501195
/locus_tag="Halhy_0390"
/note="starch binding outer membrane protein SusD; Region:
SusD; cd08977"
/db_xref="CDD:185760"
gene 501446..502483
/locus_tag="Halhy_0391"
/db_xref="GeneID:10584547"
CDS 501446..502483
/locus_tag="Halhy_0391"
/note="KEGG: cpi:Cpin_5090 hypothetical protein;
SPTR: uncharacterized protein;
IMG reference gene:2504769746"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004445175.1"
/db_xref="GI:332662387"
/db_xref="GeneID:10584547"
/translation="MKNWFSKIFPVILIMAVLSCEKDEERLVVVPGAAPVLTASTAAP
ALKIEDASKEAVKFSWSAADFNYPAGVTYTLQLAKKGTDFKEPVEFNAGPALSKSYSV
ADLNTALLRLGIAPNSLGQLDVRVKAAVSALVPTLTSASASISATPYLVIIEYPSLYV
PGGYQGWAPERAAKLASVKDNKIYEGFVYFGDASEFKMTDAPNWNNGVFGDVGDGSSK
KIASPGNNFKVPSAGYYLLKADLNDKSWDAIKTTWGLIGSGTPGGWDSDTDLTYDAAT
GTWSATLNLKADEIKFRANDDWAINFGDTKADGLLDYGGDNIKVAVAGNYTVTLNLSV
GGNYSYTLKKN"
misc_feature 501482..501829
/locus_tag="Halhy_0391"
/note="SusE outer membrane protein; Region: SusE;
pfam14292"
/db_xref="CDD:206460"
misc_feature <502142..>502216
/locus_tag="Halhy_0391"
/note="N-Utilization Substance G (NusG) N-terminal (NGN)
domain Superfamily; Region: NGN; cl02766"
/db_xref="CDD:207721"
misc_feature <502232..502432
/locus_tag="Halhy_0391"
/note="Early set domain associated with the catalytic
domain of sugar utilizing enzymes at either the N or C
terminus; Region: E_set; cl09101"
/db_xref="CDD:211508"
gene complement(502546..502929)
/locus_tag="Halhy_0392"
/db_xref="GeneID:10584548"
CDS complement(502546..502929)
/locus_tag="Halhy_0392"
/note="KEGG: dfe:Dfer_3710 hypothetical protein;
SPTR: uncharacterized protein;
IMG reference gene:2504769747"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004445176.1"
/db_xref="GI:332662388"
/db_xref="GeneID:10584548"
/translation="MSVEIVISDNFRREAKKYLKKFRSLKDELVSFQKSLRIDPKQGD
RITESVFKVRLSSKSKGKGKSGGFRIITYVVEEIEEENHDLQTVVTLLSIYDKSEIST
LSDSEIKALIDDLETREDEESDENI"
gene complement(502919..503149)
/locus_tag="Halhy_0393"
/db_xref="GeneID:10584549"
CDS complement(502919..503149)
/locus_tag="Halhy_0393"
/note="IMG reference gene:2504769748"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004445177.1"
/db_xref="GI:332662389"
/db_xref="GeneID:10584549"
/translation="MITDNMLNLNYITDAAGNQIAVQIPLNDWLLFQKEYEEIKRKLE
VLAGIKEALQEVHEARKKNQKLQTLTEFLNEC"
gene complement(503291..505696)
/locus_tag="Halhy_0394"
/db_xref="GeneID:10584550"
CDS complement(503291..505696)
/locus_tag="Halhy_0394"
/note="KEGG: phe:Phep_0813 alpha-L-fucosidase;
PRIAM: Alpha-L-fucosidase;
SPTR: Alpha-L-fucosidase;
IMG reference gene:2504769749"
/codon_start=1
/transl_table=11
/product="alpha-L-fucosidase"
/protein_id="YP_004445178.1"
/db_xref="GI:332662390"
/db_xref="InterPro:IPR008928"
/db_xref="InterPro:IPR016518"
/db_xref="GeneID:10584550"
/translation="MPVFMKNLLTLFLSVSLVCSWAQTPDRLMYYAQPAKHFEESLVL
GNGRIGAVVHGGVKSDKIFLNDATLWAGSPVDPDMNPAAHTHLPAIREALRQEDYRKA
DSLNRRHLQGKFSESYAPLGTMYIDMAHTETASNYRRQLDLSTAISTTSYQQAGVTYT
REYFISHPQQVLLIRMTASQLGKLSFNLRFNSLLRHQVNTSTNVLNASGRAPAHAEPS
YRRVPDPIQYDDQKSMRFLSLVKIIKTDGKIVRTDSTIGVQGGKEAIIMVSIATSFNG
FDQNPALHGKDEVTLANEWLKKAQIISYATIKAAHIKDHQQFFNRVQFQLAGRSSNAS
LPTDERLKRFAEGAKDPDLELLYFNFGRYLLIASSRTPQVPANLQGIWNHHLQPPWSS
NYTININTEMNYWPAESGNLSELHQPLLGFLGNLAKTGAVTAKTFYNAGGWCAAHNTD
IWAMSNPVGHFGQGSPSWANWNMGGAWLATHLWEHFDYTRDTIWLKTYGYGLMKGAAQ
FCLDILVDDGKGNLVTSPSTSPENIFITPSGYKGATLYGATADLGMIRELFLQTIAAA
KTLVQDADFQQQLEASLSKLYPYQISKKGHLQEWYHDWEDEDPKHRHQSHLFGLYPGN
HISVDQTPELAAACKQTLEVKGDETTGWSKGWRTNLWARLRDGNRTYKMYRELMRFVD
PNPETRYNGGGGAYPNLMDAHPPFQIDGNFGGTAAVLEMLVQSRSEEITLLPALPDAW
ATGSVRGVCARGGFVLNLTWSAGKLTKTEISSTRGGKTKVVYAGKTQEVVLKKAEKKV
LVW"
misc_feature complement(<504713..505321)
/locus_tag="Halhy_0394"
/note="Trehalose and maltose hydrolases (possible
phosphorylases) [Carbohydrate transport and metabolism];
Region: ATH1; COG1554"
/db_xref="CDD:31743"
gene 505875..506312
/locus_tag="Halhy_0395"
/db_xref="GeneID:10584551"
CDS 505875..506312
/locus_tag="Halhy_0395"
/note="COGs: COG0517 FOG: CBS domain;
InterPro IPR000644;
KEGG: meh:M301_2523 signal transduction protein with CBS
domains;
PFAM: Cystathionine beta-synthase, core;
SMART: Cystathionine beta-synthase, core;
SPTR: signal transduction protein with CBS domains;
IMG reference gene:2504769750;
PFAM: CBS domain"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004445179.1"
/db_xref="GI:332662391"
/db_xref="InterPro:IPR000644"
/db_xref="InterPro:IPR013785"
/db_xref="GeneID:10584551"
/translation="MKVQQILDRKLKSEILAVSPDTSVYSALEALEKHNIGALLVMEG
DKLVGIFSERDYARRGILKGKFSRESFVKDLMTSPVFTVSPQAKIEECLTIMTEKHFR
HLPVVDGEKVLGMISSTDLFRSILSQYQNLVSSLEGYISGRPM"
misc_feature 505905..506240
/locus_tag="Halhy_0395"
/note="FOG: CBS domain [General function prediction only];
Region: COG0517"
/db_xref="CDD:30863"
misc_feature 505914..506246
/locus_tag="Halhy_0395"
/note="The CBS domain, named after human CBS, is a small
domain originally identified in cystathionine
beta-synthase and is subsequently found in a wide range of
different proteins. CBS domains usually occur in tandem
repeats. They associate to form a so-called...; Region:
CBS_pair_10; cd04623"
/db_xref="CDD:73122"
gene complement(506493..507155)
/locus_tag="Halhy_0396"
/db_xref="GeneID:10584552"
CDS complement(506493..507155)
/locus_tag="Halhy_0396"
/note="InterPro IPR000835;
KEGG: sli:Slin_2146 transcriptional regulator, MarR
family;
PFAM: HTH transcriptional regulator, MarR;
SMART: HTH transcriptional regulator, MarR;
SPTR: Transcriptional regulator, MarR family;
IMG reference gene:2504769751"
/codon_start=1
/transl_table=11
/product="regulatory protein MarR"
/protein_id="YP_004445180.1"
/db_xref="GI:332662392"
/db_xref="InterPro:IPR000835"
/db_xref="InterPro:IPR011991"
/db_xref="GeneID:10584552"
/translation="MNKTVQIVNEWGAFEAAHPHAEIEEFCRYYLTAQRAKLELGENF
SGKGTPPTAASYLMKLIGYIARLFELYITRAMSDVPEIKQAEDFYFLNNISHSGECRK
TEVAHQQLLGVSTGIDTLNRLLAHGLIEERTDPSDKRARLVSVTEKGIKILHECYRRA
AVVNDLIFTNLSEDDLKLCIQLLRGVEAKHAALALEVRELPILEMYEKVLGHKPDSCK
GQ"
misc_feature complement(506628..506903)
/locus_tag="Halhy_0396"
/note="helix_turn_helix multiple antibiotic resistance
protein; Region: HTH_MARR; smart00347"
/db_xref="CDD:197670"
misc_feature complement(506709..506885)
/locus_tag="Halhy_0396"
/note="Winged helix DNA-binding domain; Region: HTH_27;
pfam13463"
/db_xref="CDD:205641"
gene 507208..507540
/locus_tag="Halhy_0397"
/db_xref="GeneID:10584553"
CDS 507208..507540
/locus_tag="Halhy_0397"
/note="IMG reference gene:2504769752"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="YP_004445181.1"
/db_xref="GI:332662393"
/db_xref="GeneID:10584553"
/translation="MFFIQNRTIFVAINTASMYLLAKRPVVFPKSSASLSPTPPKIGV
FKTNIGKRQEANRVCNQLKTDGLVTRATVDLSDCDHILRTVSNKNNLLEIILAVQCMG
FFIEELPD"
gene 507607..508830
/locus_tag="Halhy_0398"
/db_xref="GeneID:10584554"
CDS 507607..508830
/locus_tag="Halhy_0398"
/note="COGs: COG2814 Arabinose efflux permease;
InterPro IPR011701;
KEGG: dfe:Dfer_1175 major facilitator superfamily MFS_1;
PFAM: Major facilitator superfamily MFS-1;
SPTR: Major facilitator superfamily MFS_1;
IMG reference gene:2504769753;
PFAM: Major Facilitator Superfamily"
