LOCUS       NP_042987                490 aa            linear   VRL 28-NOV-2012
DEFINITION  protein U94/rep [Human herpesvirus 6A].
ACCESSION   NP_042987
VERSION     NP_042987.1  GI:9628396
DBLINK      Project: 14462
            BioProject: PRJNA14462
DBSOURCE    REFSEQ: accession NC_001664.2
KEYWORDS    .
SOURCE      Human herpesvirus 6A (HHV-6A)
  ORGANISM  Human herpesvirus 6A
            Viruses; dsDNA viruses, no RNA stage; Herpesvirales; Herpesviridae;
            Betaherpesvirinae; Roseolovirus.
REFERENCE   1  (residues 1 to 490)
  AUTHORS   Gompels,U.A., Nicholas,J., Lawrence,G., Jones,M., Thomson,B.J.,
            Martin,M.E., Efstathiou,S., Craxton,M. and Macaulay,H.A.
  TITLE     The DNA sequence of human herpesvirus-6: structure, coding content,
            and genome evolution
  JOURNAL   Virology 209 (1), 29-51 (1995)
   PUBMED   7747482
REFERENCE   2  (residues 1 to 490)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (01-AUG-2000) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (residues 1 to 490)
  AUTHORS   Gompels,U.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-DEC-1994) U.A. Gompels, Viral Pathogenesis Unit,
            Department of Clinical Sciences, London School of Hygiene and
            Tropical Medicine, University of London, Keppel Street, London WC1E
            7HT, UK
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence is identical to CAA58343.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Human herpesvirus 6A"
                     /strain="U1102"
                     /isolation_source="peripheral blood cells from an AIDS
                     patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:32603"
                     /country="Uganda"
                     /type="A"
                     /acronym="HHV-6A"
     Protein         1..490
                     /product="protein U94/rep"
                     /function="gene regulation"
                     /name="similar to parvovirus rep68/78"
                     /calculated_mol_wt=55717
     Region          17..203
                     /region_name="Rep_N"
                     /note="Rep protein catalytic domain like; pfam08724"
                     /db_xref="CDD:149700"
     Region          225..484
                     /region_name="Parvo_NS1"
                     /note="Parvovirus non-structural protein NS1; pfam01057"
                     /db_xref="CDD:144592"
     CDS             1..490
                     /gene="U94"
                     /locus_tag="HHV6gp085"
                     /coded_by="complement(NC_001664.2:141395..142867)"
                     /db_xref="GOA:Q00683"
                     /db_xref="InterPro:IPR001257"
                     /db_xref="UniProtKB/Swiss-Prot:Q00683"
                     /db_xref="GeneID:1487970"
ORIGIN      
        1 mfsiinpsdd fwtkdkyiml tikgpmewea eipgistdff ckfsnvsvph frdmhspgap
       61 dikwitactk midvilnywn nktavptpak wyaqaenkag rpslillial dgipsatigk
      121 htteirgvli kdffdgnapk iddwctyakt kkngggtqvf slsyipfall qiirpqfqwa
      181 wtninelgdv cdeihrkhii shfnkkpnvk lmlfpkdgin gislkskflg tiewlsdlgi
      241 vtedawirrd irsymqlltl thgdvlihra lsiakkrira trkaidfiah idtdfqiyen
      301 pvyqlfclqs fdpilagtil yqwlshrggk kntvsfigpp gcgksmltga ileniplhgi
      361 lhgslntknl raygqvlvlw wkdisinfdn fniiksllgg qkiifpinen dhvqigpcpi
      421 iatscvdirs mvhsnlhkin lsqrvynftf dkviprnfpv iqkddinqfl fwarnrsinc
      481 fidytvpkil
//