LOCUS       NP_787372                543 aa            linear   BCT 21-DEC-2012
DEFINITION  cytochrome c oxidase subunit I [Tropheryma whipplei str. Twist].
ACCESSION   NP_787372
VERSION     NP_787372.1  GI:28493211
DBLINK      Project: 57705
            BioProject: PRJNA57705
DBSOURCE    REFSEQ: accession NC_004572.3
KEYWORDS    .
SOURCE      Tropheryma whipplei str. Twist
  ORGANISM  Tropheryma whipplei str. Twist
            Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;
            Micrococcineae; Tropheryma.
REFERENCE   1  (residues 1 to 543)
  AUTHORS   Crapoulet,N., Barbry,P., Raoult,D. and Renesto,P.
  TITLE     Global transcriptome analysis of Tropheryma whipplei in response to
            temperature stresses
  JOURNAL   J. Bacteriol. 188 (14), 5228-5239 (2006)
   PUBMED   16816195
REFERENCE   2  (residues 1 to 543)
  AUTHORS   Raoult,D., Ogata,H., Audic,S., Robert,C., Suhre,K., Drancourt,M.
            and Claverie,J.M.
  TITLE     Tropheryma whipplei Twist: a human pathogenic Actinobacteria with a
            reduced genome
  JOURNAL   Genome Res. 13 (8), 1800-1809 (2003)
   PUBMED   12902375
REFERENCE   3  (residues 1 to 543)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-SEP-2004) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   4  (residues 1 to 543)
  AUTHORS   Raoult,D., Audic,S., Robert,C., Ogata,H., Suhre,K., Drancourt,M.
            and Claverie,J.-M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JUL-2002) Unite des Rickettsies, Faculte de Medecine,
            CNRS UMR 6020, IFR 48, Universite de la Mediterranee, 27 boulevard
            Jean Moulin, Marseille Cedex 05 13385, France
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AAO44341.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..543
                     /organism="Tropheryma whipplei str. Twist"
                     /strain="Twist"
                     /db_xref="taxon:203267"
     Protein         1..543
                     /product="cytochrome c oxidase subunit I"
                     /EC_number="1.9.3.1"
                     /calculated_mol_wt=61106
     Region          23..540
                     /region_name="CyoB"
                     /note="Heme/copper-type cytochrome/quinol oxidases,
                     subunit 1 [Energy production and conversion]; COG0843"
                     /db_xref="CDD:31185"
     Region          23..522
                     /region_name="Ubiquinol_Oxidase_I"
                     /note="Ubiquinol oxidase subunit I.  Ubiquinol oxidase,
                     the terminal oxidase in the respiratory chains of aerobic
                     bacteria, is a multi-chain transmembrane protein located
                     in the cell membrane.  It catalyzes the reduction of O2
                     and simultaneously pumps protons...; cd01662"
                     /db_xref="CDD:29933"
     Site            order(35,97,107,114,117,173..174,180,184)
                     /site_type="other"
                     /note="D-pathway"
                     /db_xref="CDD:29933"
     Site            order(45,49,52..53,70,73..75)
                     /site_type="other"
                     /note="Putative ubiquinol binding site [chemical binding]"
                     /db_xref="CDD:29933"
     Site            order(78,391,395,437,476)
                     /site_type="other"
                     /note="Low-spin heme (heme b) binding site [chemical
                     binding]"
                     /db_xref="CDD:29933"
     Site            order(248..249,377,381..382,451)
                     /site_type="other"
                     /note="Putative water exit pathway"
                     /db_xref="CDD:29933"
     Site            order(256,305..306,389)
                     /site_type="other"
                     /note="Binuclear center (heme o3/CuB) [ion binding]"
                     /db_xref="CDD:29933"
     Site            order(256,260,271,305..306,329,332)
                     /site_type="other"
                     /note="K-pathway"
                     /db_xref="CDD:29933"
     Site            order(306,381..382,451..452)
                     /site_type="other"
                     /note="Putative proton exit pathway"
                     /db_xref="CDD:29933"
     CDS             1..543
                     /gene="ctaD"
                     /locus_tag="TWT244"
                     /coded_by="NC_004572.3:326764..328395"
                     /transl_table=11
                     /db_xref="GeneID:1089307"
ORIGIN      
        1 mntsvaatls ernrkgsall siltttnhkt igymylvtsf fyfclagvma llirtqlfep
       61 gmhliqtreq ynqlftmhgt vmlflfatpl fsgfanvltp vqigapdmaf prlnalsywl
      121 ylvgslivvs tflipqgaas fgwfaytpls syeyspgvgg tlwviglafs gfssiigavn
      181 fvttiitmra pgmtmfrmsi fnwnvlvtsl lilvafpvla aalfslgmdr vfrsvlfdps
      241 tggailwqhl fwffghpevy ilalpffgiv seifpafsrk pifgyrslif atisiaalsv
      301 tvwahhmyvt gavllpffsf mtmliavptg vkifnwvgtm wrgsitfetp mvwsigfitt
      361 fvlggltgvi laspslndhl sdsyfvvahf hyvlfgtvvf amfagfyfww pkftgkmlne
      421 tlgkihfwlt figfhmtfli qhwlgvigmp rryytylped gftwlhqlst vgsfilaisl
      481 ipfflnlwvt yrrpkvdlpd dpwgngcsle watasplprh nfrsipkirs erpafdlhhp
      541 dvr
//