GenomeNet

Database: RefSeq
Entry: WP_003113639
LinkDB: WP_003113639
Original site: WP_003113639 
LOCUS       WP_003113639             840 aa            linear   BCT 01-JUN-2015
DEFINITION  multifunctional non-homologous end joining protein LigD
            [Pseudomonas aeruginosa].
ACCESSION   WP_003113639
VERSION     WP_003113639.1
KEYWORDS    RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
            Pseudomonadaceae; Pseudomonas.
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..840
                     /organism="Pseudomonas aeruginosa"
                     /db_xref="taxon:287"
     Protein         1..840
                     /product="multifunctional non-homologous end joining
                     protein LigD"
                     /EC_number="6.5.1.1"
                     /calculated_mol_wt=93899
     Region          2..839
                     /region_name="ligD"
                     /note="ATP-dependent DNA ligase; Reviewed; PRK05972"
                     /db_xref="CDD:235658"
     Region          7..162
                     /region_name="LigD_PE_dom"
                     /note="DNA ligase D, 3'-phosphoesterase domain; TIGR02777"
                     /db_xref="CDD:131824"
     Region          217..400
                     /region_name="Adenylation_DNA_ligase_LigD_LigC"
                     /note="Adenylation domain of Mycobacterium tuberculosis
                     LigD and LigC-like ATP-dependent DNA ligases; cd07906"
                     /db_xref="CDD:185715"
     Site            order(236..239,241..243,258,287,299,319,376,379,381,395,
                     397)
                     /site_type="active"
                     /db_xref="CDD:185715"
     Site            order(238,241..243,257..259,261,263,299..300,303..305,376,
                     397,399)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:185715"
     Region          403..520
                     /region_name="OBF_DNA_ligase_LigD"
                     /note="The Oligonucleotide/oligosaccharide binding
                     (OB)-fold domain of ATP-dependent DNA ligase LigD is a
                     DNA-binding module that is part of the catalytic core
                     unit; cd07971"
                     /db_xref="CDD:153440"
     Site            order(422,441..442,444..449,502,504..505,507)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:153440"
     Region          542..840
                     /region_name="LigD"
                     /note="Eukaryotic-type DNA primase [Replication,
                     recombination and repair]; COG3285"
                     /db_xref="CDD:225823"
     Site            order(604,651,669,671,704,707..708,710,759,762,768,
                     776..778)
                     /site_type="other"
                     /note="nucleotide binding site [chemical binding]"
                     /db_xref="CDD:240132"
ORIGIN      
        1 mpsskplaey arkrdfrqtp epsgrkprkd stgllrycvq khdasrlhyd frleldgtlk
       61 swavpkgpcl dpavkrlavq vedhpldyad fegsipqghy gagdvivwdr gawtplddpr
      121 eglekghlsf aldgeklsgr whlirtnlrg kqsqwflvka kdgearsldr fdvlkerpds
      181 vlsertllpr hgeaatpaar parrgksggk tpmpewiape laslveqppr gewayelkld
      241 gyrlmsried ghvrlltrng hdwterlphl ekalaglglq rswldgelvv ldeegrpdfq
      301 alqnafeegr genilyvlfd lpyhegedlr dvaleerrar leallegrde dplrfsatla
      361 edprdllasa cklglegvig krlgsayrsr rsndwiklkc qlrqefvivg ytepkgsrrh
      421 igalllglys pdeerrlrya gkvgsgftaa slkkvrerle plavrsspla kvpparetgs
      481 vqwvrpqqlc evsyaqmtrg giirqavfhg lredkparev tgerpagppp lrgarkasag
      541 asraatagvr ishpqrlidp siqasklela efharyadll lrdlrerpvs lvrgpdgigg
      601 elffqkhaar lkipgivqld paldpghppl lqirsaealv gavqmgsief htwnaslanl
      661 erpdrfvldl dpdpalpwkr mleatqlslt lldelglraf lktsggkgmh llvplerrhg
      721 wdevkdfaqa isqhlarlmp erfsavsgpr nrvgkifvdy lrnsrgastv aaysvrareg
      781 lpvsvpvfre eldslqganq wnlrslpqrl delagddpwa dyagtrqris aamrrqlgrg
//
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