GenomeNet

Database: RefSeq
Entry: XM_002418247
LinkDB: XM_002418247
Original site: XM_002418247 
LOCUS       XM_002418247            2445 bp    mRNA    linear   PLN 28-AUG-2017
DEFINITION  Candida dubliniensis CD36 heat shock protein 78, mitochondrial
            precursor, putative (HSP78), partial mRNA.
ACCESSION   XM_002418247
VERSION     XM_002418247.1
DBLINK      BioProject: PRJNA38659
            BioSample: SAMEA2272258
KEYWORDS    RefSeq.
SOURCE      Candida dubliniensis CD36
  ORGANISM  Candida dubliniensis CD36
            Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina;
            Saccharomycetes; Saccharomycetales; Debaryomycetaceae;
            Candida/Lodderomyces clade; Candida.
REFERENCE   1
  AUTHORS   Jackson,A.P., Gamble,J.A., Yeomans,T., Moran,G.P., Saunders,D.,
            Harris,D., Aslett,M., Barrell,J.F., Butler,G., Citiulo,F.,
            Coleman,D.C., de Groot,P.W., Goodwin,T.J., Quail,M.A.,
            McQuillan,J., Munro,C.A., Pain,A., Poulter,R.T., Rajandream,M.A.,
            Renauld,H., Spiering,M.J., Tivey,A., Gow,N.A., Barrell,B.,
            Sullivan,D.J. and Berriman,M.
  TITLE     Comparative genomics of the fungal pathogens Candida dubliniensis
            and Candida albicans
  JOURNAL   Genome Res. 19 (12), 2231-2244 (2009)
   PUBMED   19745113
REFERENCE   2  (bases 1 to 2445)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (28-AUG-2017) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 2445)
  AUTHORS   Gamble,J.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-JAN-2009) Gamble J.A., Pathogen Sequencing Unit,
            Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus,
            Hinxton, Cambridge, CB10 1SA, UNITED KINGDOM
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NC_012861).
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..2445
                     /organism="Candida dubliniensis CD36"
                     /mol_type="mRNA"
                     /strain="CD36"
                     /type_material="type material of Candida dubliniensis"
                     /db_xref="taxon:573826"
                     /chromosome="2"
     gene            <1..>2445
                     /gene="HSP78"
                     /locus_tag="CD36_18140"
                     /db_xref="GeneID:8045848"
     CDS             1..2445
                     /gene="HSP78"
                     /locus_tag="CD36_18140"
                     /inference="similar to AA sequence:UniProt:P33416"
                     /inference="similar to AA sequence:UniProt:Q96UX5"
                     /codon_start=1
                     /transl_table=12
                     /product="heat shock protein 78, mitochondrial precursor,
                     putative"
                     /protein_id="XP_002418292.1"
                     /db_xref="GeneID:8045848"
                     /db_xref="GOA:B9WB22"
                     /db_xref="InterPro:IPR001270"
                     /db_xref="InterPro:IPR003593"
                     /db_xref="InterPro:IPR003959"
                     /db_xref="InterPro:IPR018368"
                     /db_xref="InterPro:IPR019489"
                     /db_xref="InterPro:IPR027417"
                     /db_xref="InterPro:IPR028299"
                     /db_xref="UniProtKB/TrEMBL:B9WB22"
                     /translation="MLSFRIPKSKLLKQSPTTSSLSLARSIPSIPTTTARYRPNQYYQ
                     NVLAKPNVFTLRSTPCFSQVRSFHSSLPRKLQMQQTEQGDNRPALEKFGSDLTQLAKE
                     GKLDPVIGRDHEIRRTIQILSRRTKNNPVLIGNAGTGKTAVMEGLAQRIVRGEVPDSM
                     KDKQIITLDLAGIISGAKYRGDFESKLKSILKEVEEKNGKVILFIDEFHLLMGLGKAE
                     GSIDASNLLKPALARGKLSMCGATTIEEYRKYVEKDAALARRFSPVTVNEPTVEDTIS
                     ILRGLKERYEVHHGVRIMDSALVTAALYSNRYITDRFLPDKAIDLVDEASSTLRLQHE
                     SRPDAIATLDRQIMTIEIELESLRKEEDQLSIDRKLKLEKELEVKKSELKELTDQWES
                     EKRAIDAVKNAKSELERAKYELEQATREGDYARASRIQYANIPELQAKIQELSKNESA
                     AKSSNLLHDSVTSEDIAGVISKMTGIPVNNLLKGEKDKLLDMNILLRQSVVGQDEAID
                     AVSDAVRLQRAGLTSENRPIASFMFLGPTGTGKTELTKSLAQFLFNDKNAVIRFDMSE
                     FQEKHTISRLIGSPPGYVGYEESGELTEAVRRKPYAVVLFDEFEKAHPDLSKLLLQVL
                     DEGSLTDSHGKKIDFKNTIIVMTSNIGQEILLADKNTYEDGHINNEVKQQVLENLKHH
                     YAPEFLNRVDDIVVFNRLSKTALREILDIRLREIGDRLIDKRIVLQLTDEAKTLLCDM
                     GYDPTYGARPLNRVLRKKLLDPLAMRMIKGQVQENETVKVEVKDHKIYVVPNHTEGTV
                     IEKEEDYFKEEENDDK"
     misc_feature    250..2361
                     /gene="HSP78"
                     /locus_tag="CD36_18140"
                     /note="ATP-dependent chaperone ClpB; Region:
                     chaperone_ClpB; TIGR03346"
                     /db_xref="CDD:274529"
ORIGIN      
        1 atgttatcat ttagaatacc aaagagtaaa cttttaaaac aatctccgac cacgagcagt
       61 ttgagtctag ctagaagtat accaagtata ccaaccacaa ctgctagata cagacccaac
      121 caatattacc agaatgtatt agctaaacct aatgtattca ccttgcgcag cacaccatgt
      181 ttttcacaag ttagaagttt tcacctgtct ttacctcgaa aacttcaaat gcaacagact
      241 gagcaaggcg acaatcgacc agcattagaa aagttcggtt ccgatttgac ccagttagcc
      301 aaagaaggta agttggatcc agttattgga agagatcacg aaattcgtcg gaccattcaa
      361 atattatcac gtcgaacaaa aaataatcct gtattgattg gtaatgctgg tactggtaaa
      421 accgctgtta tggaaggttt ggcacaaaga atcgttcgtg gcgaagttcc tgattccatg
      481 aaggataaac aaattattac tttagatttg gctggtatca taagtggagc taaataccgt
      541 ggggattttg agagtaagct caagtcaata ttgaaagaag ttgaagaaaa gaatggtaag
      601 gttatattgt ttattgatga gtttcattta ttgatgggtt tgggtaaagc cgaaggatca
      661 attgacgctt caaacttgtt gaaacctgcc ttggcaaggg gtaaattgtc aatgtgtgga
      721 gcaactacca tcgaagaata tagaaaatat gtggagaaag atgctgcctt agctagaaga
      781 ttttctcctg ttactgtgaa tgaacctacc gttgaagata ccatttcaat tttgcgaggc
      841 ttaaaggaac gttacgaagt tcaccatggg gttcgtatca tggactcagc actagttact
      901 gctgcattat attctaatag atacataaca gacagatttt taccagataa agctattgat
      961 ttagttgatg aagcaagttc aacattgcgg ttgcaacacg aatctcgacc agatgcaatt
     1021 gcaactttag accgtcaaat tatgactatt gagatcgagt tggaatcttt aagaaaagaa
     1081 gaggatcaac tatccattga cagaaagctt aagctagaaa aagaattgga agtgaaaaaa
     1141 agtgaattga aggaattaac agaccaatgg gagtcagaaa agcgggctat tgatgctgtg
     1201 aaaaatgcaa agtctgaatt agaaagggca aaatacgagt tagaacaagc tactagagaa
     1261 ggtgactacg ccagggcttc cagaatccag tatgctaata ttcctgaatt acaagcaaaa
     1321 atccaagagt tgagcaagaa tgagctggct gctaaatcat cgaatctttt acatgattct
     1381 gtaacctctg aggatattgc tggtgtaata tcaaagatga cggggatccc ggtgaacaat
     1441 ttgttgaaag gcgaaaagga caagttgcta gacatgaata tactcttgcg ccaatcagtt
     1501 gttggtcaag atgaagcaat tgatgcggtc tctgacgcag ttagattgca gcgtgcaggg
     1561 ttaaccagtg agaatcgtcc aattgcatca tttatgtttt tgggtcctac tggtacaggg
     1621 aaaacagaat tgacaaaatc gttagcacaa ttcttgttca acgataaaaa cgctgtgatc
     1681 agatttgata tgtctgagtt ccaagaaaag cataccatat cgagattaat aggttctccg
     1741 ccaggatatg tgggatacga agagagtggc gagttgactg aagctgtcag aagaaagcca
     1801 tacgcggtag tcttatttga tgagtttgag aaagcacacc cagatctttc caagttatta
     1861 ttacaagtat tagacgaagg ctcgttaacg gactctcatg gcaaaaaaat tgatttcaag
     1921 aacacaatta ttgtgatgac atccaatatt ggtcaagaga ttttgcttgc tgataagaat
     1981 acctacgagg atggtcatat aaacaatgag gtcaaacaac aagttttaga gaatttgaaa
     2041 caccattatg ctccagagtt cttgaaccgt gttgatgata tcgtggtatt caacagatta
     2101 tcaaagaccg ctttgaggga aattttagat attcgtttga gagaaatcgg tgatcgcttg
     2161 atcgacaagc gtattgtctt acaattgaca gatgaagcga aaacattgtt gtgtgatatg
     2221 gggtatgatc caacttatgg tgctcgtcca cttaataggg ttttgagaaa gaagttgtta
     2281 gatccattgg ctatgcgtat gatcaaggga caagttcaag aaaatgaaac agtcaaagta
     2341 gaagtgaaag atcacaaaat ttatgttgtt ccaaaccata ctgaaggaac agttattgaa
     2401 aaggaagaag attattttaa agaagaagaa aacgacgata aatag
//
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