LOCUS XM_002418247 2445 bp mRNA linear PLN 28-AUG-2017
DEFINITION Candida dubliniensis CD36 heat shock protein 78, mitochondrial
precursor, putative (HSP78), partial mRNA.
ACCESSION XM_002418247
VERSION XM_002418247.1
DBLINK BioProject: PRJNA38659
BioSample: SAMEA2272258
KEYWORDS RefSeq.
SOURCE Candida dubliniensis CD36
ORGANISM Candida dubliniensis CD36
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina;
Saccharomycetes; Saccharomycetales; Debaryomycetaceae;
Candida/Lodderomyces clade; Candida.
REFERENCE 1
AUTHORS Jackson,A.P., Gamble,J.A., Yeomans,T., Moran,G.P., Saunders,D.,
Harris,D., Aslett,M., Barrell,J.F., Butler,G., Citiulo,F.,
Coleman,D.C., de Groot,P.W., Goodwin,T.J., Quail,M.A.,
McQuillan,J., Munro,C.A., Pain,A., Poulter,R.T., Rajandream,M.A.,
Renauld,H., Spiering,M.J., Tivey,A., Gow,N.A., Barrell,B.,
Sullivan,D.J. and Berriman,M.
TITLE Comparative genomics of the fungal pathogens Candida dubliniensis
and Candida albicans
JOURNAL Genome Res. 19 (12), 2231-2244 (2009)
PUBMED 19745113
REFERENCE 2 (bases 1 to 2445)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (28-AUG-2017) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 2445)
AUTHORS Gamble,J.A.
TITLE Direct Submission
JOURNAL Submitted (19-JAN-2009) Gamble J.A., Pathogen Sequencing Unit,
Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus,
Hinxton, Cambridge, CB10 1SA, UNITED KINGDOM
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. This record is derived from an annotated genomic
sequence (NC_012861).
COMPLETENESS: incomplete on both ends.
FEATURES Location/Qualifiers
source 1..2445
/organism="Candida dubliniensis CD36"
/mol_type="mRNA"
/strain="CD36"
/type_material="type material of Candida dubliniensis"
/db_xref="taxon:573826"
/chromosome="2"
gene <1..>2445
/gene="HSP78"
/locus_tag="CD36_18140"
/db_xref="GeneID:8045848"
CDS 1..2445
/gene="HSP78"
/locus_tag="CD36_18140"
/inference="similar to AA sequence:UniProt:P33416"
/inference="similar to AA sequence:UniProt:Q96UX5"
/codon_start=1
/transl_table=12
/product="heat shock protein 78, mitochondrial precursor,
putative"
/protein_id="XP_002418292.1"
/db_xref="GeneID:8045848"
/db_xref="GOA:B9WB22"
/db_xref="InterPro:IPR001270"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR003959"
/db_xref="InterPro:IPR018368"
/db_xref="InterPro:IPR019489"
/db_xref="InterPro:IPR027417"
/db_xref="InterPro:IPR028299"
/db_xref="UniProtKB/TrEMBL:B9WB22"
/translation="MLSFRIPKSKLLKQSPTTSSLSLARSIPSIPTTTARYRPNQYYQ
NVLAKPNVFTLRSTPCFSQVRSFHSSLPRKLQMQQTEQGDNRPALEKFGSDLTQLAKE
GKLDPVIGRDHEIRRTIQILSRRTKNNPVLIGNAGTGKTAVMEGLAQRIVRGEVPDSM
KDKQIITLDLAGIISGAKYRGDFESKLKSILKEVEEKNGKVILFIDEFHLLMGLGKAE
GSIDASNLLKPALARGKLSMCGATTIEEYRKYVEKDAALARRFSPVTVNEPTVEDTIS
ILRGLKERYEVHHGVRIMDSALVTAALYSNRYITDRFLPDKAIDLVDEASSTLRLQHE
SRPDAIATLDRQIMTIEIELESLRKEEDQLSIDRKLKLEKELEVKKSELKELTDQWES
EKRAIDAVKNAKSELERAKYELEQATREGDYARASRIQYANIPELQAKIQELSKNESA
AKSSNLLHDSVTSEDIAGVISKMTGIPVNNLLKGEKDKLLDMNILLRQSVVGQDEAID
AVSDAVRLQRAGLTSENRPIASFMFLGPTGTGKTELTKSLAQFLFNDKNAVIRFDMSE
FQEKHTISRLIGSPPGYVGYEESGELTEAVRRKPYAVVLFDEFEKAHPDLSKLLLQVL
DEGSLTDSHGKKIDFKNTIIVMTSNIGQEILLADKNTYEDGHINNEVKQQVLENLKHH
YAPEFLNRVDDIVVFNRLSKTALREILDIRLREIGDRLIDKRIVLQLTDEAKTLLCDM
GYDPTYGARPLNRVLRKKLLDPLAMRMIKGQVQENETVKVEVKDHKIYVVPNHTEGTV
IEKEEDYFKEEENDDK"
misc_feature 250..2361
/gene="HSP78"
/locus_tag="CD36_18140"
/note="ATP-dependent chaperone ClpB; Region:
chaperone_ClpB; TIGR03346"
/db_xref="CDD:274529"
ORIGIN
1 atgttatcat ttagaatacc aaagagtaaa cttttaaaac aatctccgac cacgagcagt
61 ttgagtctag ctagaagtat accaagtata ccaaccacaa ctgctagata cagacccaac
121 caatattacc agaatgtatt agctaaacct aatgtattca ccttgcgcag cacaccatgt
181 ttttcacaag ttagaagttt tcacctgtct ttacctcgaa aacttcaaat gcaacagact
241 gagcaaggcg acaatcgacc agcattagaa aagttcggtt ccgatttgac ccagttagcc
301 aaagaaggta agttggatcc agttattgga agagatcacg aaattcgtcg gaccattcaa
361 atattatcac gtcgaacaaa aaataatcct gtattgattg gtaatgctgg tactggtaaa
421 accgctgtta tggaaggttt ggcacaaaga atcgttcgtg gcgaagttcc tgattccatg
481 aaggataaac aaattattac tttagatttg gctggtatca taagtggagc taaataccgt
541 ggggattttg agagtaagct caagtcaata ttgaaagaag ttgaagaaaa gaatggtaag
601 gttatattgt ttattgatga gtttcattta ttgatgggtt tgggtaaagc cgaaggatca
661 attgacgctt caaacttgtt gaaacctgcc ttggcaaggg gtaaattgtc aatgtgtgga
721 gcaactacca tcgaagaata tagaaaatat gtggagaaag atgctgcctt agctagaaga
781 ttttctcctg ttactgtgaa tgaacctacc gttgaagata ccatttcaat tttgcgaggc
841 ttaaaggaac gttacgaagt tcaccatggg gttcgtatca tggactcagc actagttact
901 gctgcattat attctaatag atacataaca gacagatttt taccagataa agctattgat
961 ttagttgatg aagcaagttc aacattgcgg ttgcaacacg aatctcgacc agatgcaatt
1021 gcaactttag accgtcaaat tatgactatt gagatcgagt tggaatcttt aagaaaagaa
1081 gaggatcaac tatccattga cagaaagctt aagctagaaa aagaattgga agtgaaaaaa
1141 agtgaattga aggaattaac agaccaatgg gagtcagaaa agcgggctat tgatgctgtg
1201 aaaaatgcaa agtctgaatt agaaagggca aaatacgagt tagaacaagc tactagagaa
1261 ggtgactacg ccagggcttc cagaatccag tatgctaata ttcctgaatt acaagcaaaa
1321 atccaagagt tgagcaagaa tgagctggct gctaaatcat cgaatctttt acatgattct
1381 gtaacctctg aggatattgc tggtgtaata tcaaagatga cggggatccc ggtgaacaat
1441 ttgttgaaag gcgaaaagga caagttgcta gacatgaata tactcttgcg ccaatcagtt
1501 gttggtcaag atgaagcaat tgatgcggtc tctgacgcag ttagattgca gcgtgcaggg
1561 ttaaccagtg agaatcgtcc aattgcatca tttatgtttt tgggtcctac tggtacaggg
1621 aaaacagaat tgacaaaatc gttagcacaa ttcttgttca acgataaaaa cgctgtgatc
1681 agatttgata tgtctgagtt ccaagaaaag cataccatat cgagattaat aggttctccg
1741 ccaggatatg tgggatacga agagagtggc gagttgactg aagctgtcag aagaaagcca
1801 tacgcggtag tcttatttga tgagtttgag aaagcacacc cagatctttc caagttatta
1861 ttacaagtat tagacgaagg ctcgttaacg gactctcatg gcaaaaaaat tgatttcaag
1921 aacacaatta ttgtgatgac atccaatatt ggtcaagaga ttttgcttgc tgataagaat
1981 acctacgagg atggtcatat aaacaatgag gtcaaacaac aagttttaga gaatttgaaa
2041 caccattatg ctccagagtt cttgaaccgt gttgatgata tcgtggtatt caacagatta
2101 tcaaagaccg ctttgaggga aattttagat attcgtttga gagaaatcgg tgatcgcttg
2161 atcgacaagc gtattgtctt acaattgaca gatgaagcga aaacattgtt gtgtgatatg
2221 gggtatgatc caacttatgg tgctcgtcca cttaataggg ttttgagaaa gaagttgtta
2281 gatccattgg ctatgcgtat gatcaaggga caagttcaag aaaatgaaac agtcaaagta
2341 gaagtgaaag atcacaaaat ttatgttgtt ccaaaccata ctgaaggaac agttattgaa
2401 aaggaagaag attattttaa agaagaagaa aacgacgata aatag
//