LOCUS XP_001998086 40 aa linear INV 17-SEP-2008
DEFINITION GH13934 [Drosophila grimshawi].
ACCESSION XP_001998086
VERSION XP_001998086.1 GI:195102498
DBSOURCE REFSEQ: accession XM_001998050.1
KEYWORDS .
SOURCE Drosophila grimshawi
ORGANISM Drosophila grimshawi
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Hawaiian
Drosophila.
REFERENCE 1 (residues 1 to 40)
AUTHORS Zimin,A.V., Smith,D.R., Sutton,G. and Yorke,J.A.
TITLE Assembly reconciliation
JOURNAL Bioinformatics 24 (1), 42-45 (2008)
PUBMED 18057021
REFERENCE 2 (residues 1 to 40)
AUTHORS Clark,A.G., Eisen,M.B., Smith,D.R., Bergman,C.M., Oliver,B.,
Markow,T.A., Kaufman,T.C., Kellis,M., Gelbart,W., Iyer,V.N.,
Pollard,D.A., Sackton,T.B., Larracuente,A.M., Singh,N.D.,
Abad,J.P., Abt,D.N., Adryan,B., Aguade,M., Akashi,H.,
Anderson,W.W., Aquadro,C.F., Ardell,D.H., Arguello,R.,
Artieri,C.G., Barbash,D.A., Barker,D., Barsanti,P., Batterham,P.,
Batzoglou,S., Begun,D., Bhutkar,A., Blanco,E., Bosak,S.A.,
Bradley,R.K., Brand,A.D., Brent,M.R., Brooks,A.N., Brown,R.H.,
Butlin,R.K., Caggese,C., Calvi,B.R., Bernardo de Carvalho,A.,
Caspi,A., Castrezana,S., Celniker,S.E., Chang,J.L., Chapple,C.,
Chatterji,S., Chinwalla,A., Civetta,A., Clifton,S.W., Comeron,J.M.,
Costello,J.C., Coyne,J.A., Daub,J., David,R.G., Delcher,A.L.,
Delehaunty,K., Do,C.B., Ebling,H., Edwards,K., Eickbush,T.,
Evans,J.D., Filipski,A., Findeiss,S., Freyhult,E., Fulton,L.,
Fulton,R., Garcia,A.C., Gardiner,A., Garfield,D.A., Garvin,B.E.,
Gibson,G., Gilbert,D., Gnerre,S., Godfrey,J., Good,R., Gotea,V.,
Gravely,B., Greenberg,A.J., Griffiths-Jones,S., Gross,S., Guigo,R.,
Gustafson,E.A., Haerty,W., Hahn,M.W., Halligan,D.L., Halpern,A.L.,
Halter,G.M., Han,M.V., Heger,A., Hillier,L., Hinrichs,A.S.,
Holmes,I., Hoskins,R.A., Hubisz,M.J., Hultmark,D., Huntley,M.A.,
Jaffe,D.B., Jagadeeshan,S., Jeck,W.R., Johnson,J., Jones,C.D.,
Jordan,W.C., Karpen,G.H., Kataoka,E., Keightley,P.D.,
Kheradpour,P., Kirkness,E.F., Koerich,L.B., Kristiansen,K.,
Kudrna,D., Kulathinal,R.J., Kumar,S., Kwok,R., Lander,E.,
Langley,C.H., Lapoint,R., Lazzaro,B.P., Lee,S.J., Levesque,L.,
Li,R., Lin,C.F., Lin,M.F., Lindblad-Toh,K., Llopart,A., Long,M.,
Low,L., Lozovsky,E., Lu,J., Luo,M., Machado,C.A., Makalowski,W.,
Marzo,M., Matsuda,M., Matzkin,L., McAllister,B., McBride,C.S.,
McKernan,B., McKernan,K., Mendez-Lago,M., Minx,P.,
Mollenhauer,M.U., Montooth,K., Mount,S.M., Mu,X., Myers,E.,
Negre,B., Newfeld,S., Nielsen,R., Noor,M.A., O'Grady,P.,
Pachter,L., Papaceit,M., Parisi,M.J., Parisi,M., Parts,L.,
Pedersen,J.S., Pesole,G., Phillippy,A.M., Ponting,C.P., Pop,M.,
Porcelli,D., Powell,J.R., Prohaska,S., Pruitt,K., Puig,M.,
Quesneville,H., Ram,K.R., Rand,D., Rasmussen,M.D., Reed,L.K.,
Reenan,R., Reily,A., Remington,K.A., Rieger,T.T., Ritchie,M.G.,
Robin,C., Rogers,Y.H., Rohde,C., Rozas,J., Rubenfield,M.J.,
Ruiz,A., Russo,S., Salzberg,S.L., Sanchez-Gracia,A., Saranga,D.J.,
Sato,H., Schaeffer,S.W., Schatz,M.C., Schlenke,T., Schwartz,R.,
Segarra,C., Singh,R.S., Sirot,L., Sirota,M., Sisneros,N.B.,
Smith,C.D., Smith,T.F., Spieth,J., Stage,D.E., Stark,A.,
Stephan,W., Strausberg,R.L., Strempel,S., Sturgill,D., Sutton,G.,
Sutton,G.G., Tao,W., Teichmann,S., Tobari,Y.N., Tomimura,Y.,
Tsolas,J.M., Valente,V.L., Venter,E., Venter,J.C., Vicario,S.,
Vieira,F.G., Vilella,A.J., Villasante,A., Walenz,B., Wang,J.,
Wasserman,M., Watts,T., Wilson,D., Wilson,R.K., Wing,R.A.,
Wolfner,M.F., Wong,A., Wong,G.K., Wu,C.I., Wu,G., Yamamoto,D.,
Yang,H.P., Yang,S.P., Yorke,J.A., Yoshida,K., Zdobnov,E., Zhang,P.,
Zhang,Y., Zimin,A.V., Baldwin,J., Abdouelleil,A., Abdulkadir,J.,
Abebe,A., Abera,B., Abreu,J., Acer,S.C., Aftuck,L., Alexander,A.,
An,P., Anderson,E., Anderson,S., Arachi,H., Azer,M.,
Bachantsang,P., Barry,A., Bayul,T., Berlin,A., Bessette,D.,
Bloom,T., Blye,J., Boguslavskiy,L., Bonnet,C., Boukhgalter,B.,
Bourzgui,I., Brown,A., Cahill,P., Channer,S., Cheshatsang,Y.,
Chuda,L., Citroen,M., Collymore,A., Cooke,P., Costello,M.,
D'Aco,K., Daza,R., De Haan,G., DeGray,S., DeMaso,C., Dhargay,N.,
Dooley,K., Dooley,E., Doricent,M., Dorje,P., Dorjee,K., Dupes,A.,
Elong,R., Falk,J., Farina,A., Faro,S., Ferguson,D., Fisher,S.,
Foley,C.D., Franke,A., Friedrich,D., Gadbois,L., Gearin,G.,
Gearin,C.R., Giannoukos,G., Goode,T., Graham,J., Grandbois,E.,
Grewal,S., Gyaltsen,K., Hafez,N., Hagos,B., Hall,J., Henson,C.,
Hollinger,A., Honan,T., Huard,M.D., Hughes,L., Hurhula,B.,
Husby,M.E., Kamat,A., Kanga,B., Kashin,S., Khazanovich,D.,
Kisner,P., Lance,K., Lara,M., Lee,W., Lennon,N., Letendre,F.,
LeVine,R., Lipovsky,A., Liu,X., Liu,J., Liu,S., Lokyitsang,T.,
Lokyitsang,Y., Lubonja,R., Lui,A., MacDonald,P., Magnisalis,V.,
Maru,K., Matthews,C., McCusker,W., McDonough,S., Mehta,T.,
Meldrim,J., Meneus,L., Mihai,O., Mihalev,A., Mihova,T.,
Mittelman,R., Mlenga,V., Montmayeur,A., Mulrain,L., Navidi,A.,
Naylor,J., Negash,T., Nguyen,T., Nguyen,N., Nicol,R., Norbu,C.,
Norbu,N., Novod,N., O'Neill,B., Osman,S., Markiewicz,E.,
Oyono,O.L., Patti,C., Phunkhang,P., Pierre,F., Priest,M.,
Raghuraman,S., Rege,F., Reyes,R., Rise,C., Rogov,P., Ross,K.,
Ryan,E., Settipalli,S., Shea,T., Sherpa,N., Shi,L., Shih,D.,
Sparrow,T., Spaulding,J., Stalker,J., Stange-Thomann,N.,
Stavropoulos,S., Stone,C., Strader,C., Tesfaye,S., Thomson,T.,
Thoulutsang,Y., Thoulutsang,D., Topham,K., Topping,I., Tsamla,T.,
Vassiliev,H., Vo,A., Wangchuk,T., Wangdi,T., Weiand,M.,
Wilkinson,J., Wilson,A., Yadav,S., Young,G., Yu,Q., Zembek,L.,
Zhong,D., Zimmer,A., Zwirko,Z., Jaffe,D.B., Alvarez,P.,
Brockman,W., Butler,J., Chin,C., Gnerre,S., Grabherr,M., Kleber,M.,
Mauceli,E. and MacCallum,I.
CONSRTM Drosophila 12 Genomes Consortium
TITLE Evolution of genes and genomes on the Drosophila phylogeny
JOURNAL Nature 450 (7167), 203-218 (2007)
PUBMED 17994087
REFERENCE 3 (residues 1 to 40)
CONSRTM FlyBase
TITLE Direct Submission
JOURNAL Submitted (09-JUN-2008) FlyBase, Harvard University, Biological
Laboratories, 16 Divinity Ave., Cambridge, MA 02138, USA
REFERENCE 4 (residues 1 to 40)
AUTHORS Smith,D.R., Tao,W., Saranga,D.J., Brand,A., Ebling,H.,
Rubenfield,M., Bosak,S., Garvin,B., McKernan,B., McKernan,K.,
Parisi,M., Stelling,O., Lin,N., David,R., Gustafson,E., Zimin,A.,
Roberts,M., York,J. and Sutton,G.
TITLE Direct Submission
JOURNAL Submitted (06-APR-2006) Agencourt Bioscience Corporation, 500
Cummings Center Suite 2450, Beverly, MA 01915, USA
COMMENT PROVISIONAL REFSEQ: This record is based on preliminary annotation
provided by FlyBase. The reference sequence was derived from
EDW04334.
Method: conceptual translation.
FEATURES Location/Qualifiers
source 1..40
/organism="Drosophila grimshawi"
/strain="TSC#15287-2541.00"
/db_xref="taxon:7222"
Protein 1..40
/product="Dgri\GH13934-PA"
/name="GH13934 gene product from transcript GH13934-RA"
/note="GH13934; GH13934-PA"
/calculated_mol_wt=4009
Region 1..36
/region_name="DIM"
/note="DIM protein; pfam08194"
/db_xref="CDD:149322"
CDS 1..40
/gene="Dgri\GH13934"
/locus_tag="Dgri_GH13934"
/gene_synonym="dgri_GLEANR_13846; GH13934"
/coded_by="XM_001998050.1:1..123"
/db_xref="FLYBASE:FBgn0121410"
/db_xref="GeneID:6571918"
ORIGIN
1 mkwlsiafvl gllafasadp lrggdviing hcvscnvhgg
//
