GenomeNet

Database: RefSeq
Entry: XP_002311015
LinkDB: XP_002311015
Original site: XP_002311015 
LOCUS       XP_002311015             416 aa            linear   PLN 31-DEC-2013
DEFINITION  mevalonate disphosphate decarboxylase family protein [Populus
            trichocarpa].
ACCESSION   XP_002311015
VERSION     XP_002311015.1
DBSOURCE    REFSEQ: accession XM_002310979.2
KEYWORDS    RefSeq.
SOURCE      Populus trichocarpa (Populus balsamifera subsp. trichocarpa)
  ORGANISM  Populus trichocarpa
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae;
            Populus.
REFERENCE   1  (residues 1 to 416)
  AUTHORS   Tuskan,G.A., Difazio,S., Jansson,S., Bohlmann,J., Grigoriev,I.,
            Hellsten,U., Putnam,N., Ralph,S., Rombauts,S., Salamov,A.,
            Schein,J., Sterck,L., Aerts,A., Bhalerao,R.R., Bhalerao,R.P.,
            Blaudez,D., Boerjan,W., Brun,A., Brunner,A., Busov,V., Campbell,M.,
            Carlson,J., Chalot,M., Chapman,J., Chen,G.L., Cooper,D.,
            Coutinho,P.M., Couturier,J., Covert,S., Cronk,Q., Cunningham,R.,
            Davis,J., Degroeve,S., Dejardin,A., Depamphilis,C., Detter,J.,
            Dirks,B., Dubchak,I., Duplessis,S., Ehlting,J., Ellis,B.,
            Gendler,K., Goodstein,D., Gribskov,M., Grimwood,J., Groover,A.,
            Gunter,L., Hamberger,B., Heinze,B., Helariutta,Y., Henrissat,B.,
            Holligan,D., Holt,R., Huang,W., Islam-Faridi,N., Jones,S.,
            Jones-Rhoades,M., Jorgensen,R., Joshi,C., Kangasjarvi,J.,
            Karlsson,J., Kelleher,C., Kirkpatrick,R., Kirst,M., Kohler,A.,
            Kalluri,U., Larimer,F., Leebens-Mack,J., Leple,J.C., Locascio,P.,
            Lou,Y., Lucas,S., Martin,F., Montanini,B., Napoli,C., Nelson,D.R.,
            Nelson,C., Nieminen,K., Nilsson,O., Pereda,V., Peter,G.,
            Philippe,R., Pilate,G., Poliakov,A., Razumovskaya,J.,
            Richardson,P., Rinaldi,C., Ritland,K., Rouze,P., Ryaboy,D.,
            Schmutz,J., Schrader,J., Segerman,B., Shin,H., Siddiqui,A.,
            Sterky,F., Terry,A., Tsai,C.J., Uberbacher,E., Unneberg,P.,
            Vahala,J., Wall,K., Wessler,S., Yang,G., Yin,T., Douglas,C.,
            Marra,M., Sandberg,G., Van de Peer,Y. and Rokhsar,D.
  TITLE     The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)
  JOURNAL   Science 313 (5793), 1596-1604 (2006)
   PUBMED   16973872
REFERENCE   2  (residues 1 to 416)
  AUTHORS   Shu,S., Lucas,S., Jenkins,J., Grimwood,J., Muchero,w., Hayes,R.,
            Goodstein,D., Rokhsar,D., Schmutz,J. and Tuskan,G.
  CONSRTM   US DOE Joint Genome Institute (JGI-PGF)
  TITLE     Direct Submission
  JOURNAL   Submitted (07-SEP-2012) US DOE Joint Genome Institute, Mitchell
            Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence is identical to EEE88382.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Populus trichocarpa"
                     /db_xref="taxon:3694"
                     /linkage_group="LGVIII"
     Protein         1..416
                     /product="mevalonate disphosphate decarboxylase family
                     protein"
                     /calculated_mol_wt=45524
     Region          7..348
                     /region_name="PLN02407"
                     /note="diphosphomevalonate decarboxylase"
                     /db_xref="CDD:178029"
     CDS             1..416
                     /locus_tag="POPTR_0008s02200g"
                     /old_locus_tag="POPTRDRAFT_655777"
                     /coded_by="XM_002310979.2:164..1414"
                     /note="encoded by transcript POPTR_0008s022001"
                     /db_xref="Phytozome:POPTR_0008s02200.1.p"
                     /db_xref="GeneID:7490899"
ORIGIN      
        1 maektwvrmv taqtptniav ikywgkrdet lilpvndsis vtldpahlct tttvavspsf
       61 dqdrmwlngk eislsggryq nclreirara cavedkekgi kiakkdwekl hlhvasynnf
      121 ptaaglassa agfaclvfal aklmnakedn selsaiarqg sgsacrslfg gfvkwimgka
      181 edgsdslavq lvdekhwdel viiiavvssr qketssttgm rdsvetslll qhrakevvpk
      241 rikqmeeaik nrdfgsfaql scadsnqfha vcldtcppif ymndtshrii scvekwncse
      301 gtpqvaytfd agpnavliah nrkaatqlmq kllfcfppss dadlnsyvig dksilkdagi
      361 edikdvealp pppeikdaqr ckgdvsyfic tkpgrgpall sdesqallhp etglpk
//
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