GenomeNet

Database: RefSeq
Entry: XP_002590326
LinkDB: XP_002590326
Original site: XP_002590326 
LOCUS       XP_002590326             509 aa            linear   INV 08-OCT-2009
DEFINITION  hypothetical protein BRAFLDRAFT_121378 [Branchiostoma floridae].
ACCESSION   XP_002590326
VERSION     XP_002590326.1
DBSOURCE    REFSEQ: accession XM_002590280.1
KEYWORDS    RefSeq.
SOURCE      Branchiostoma floridae (Florida lancelet)
  ORGANISM  Branchiostoma floridae
            Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae;
            Branchiostoma.
REFERENCE   1  (residues 1 to 509)
  AUTHORS   Putnam,N.H., Butts,T., Ferrier,D.E., Furlong,R.F., Hellsten,U.,
            Kawashima,T., Robinson-Rechavi,M., Shoguchi,E., Terry,A., Yu,J.K.,
            Benito-Gutierrez,E.L., Dubchak,I., Garcia-Fernandez,J.,
            Gibson-Brown,J.J., Grigoriev,I.V., Horton,A.C., de Jong,P.J.,
            Jurka,J., Kapitonov,V.V., Kohara,Y., Kuroki,Y., Lindquist,E.,
            Lucas,S., Osoegawa,K., Pennacchio,L.A., Salamov,A.A., Satou,Y.,
            Sauka-Spengler,T., Schmutz,J., Shin-I,T., Toyoda,A.,
            Bronner-Fraser,M., Fujiyama,A., Holland,L.Z., Holland,P.W.,
            Satoh,N. and Rokhsar,D.S.
  TITLE     The amphioxus genome and the evolution of the chordate karyotype
  JOURNAL   Nature 453 (7198), 1064-1071 (2008)
   PUBMED   18563158
REFERENCE   2  (residues 1 to 509)
  AUTHORS   Terry,A., Salamov,A., Zhou,K., Grigoriev,I., Pitluck,S., Lucas,S.,
            Detter,J.C., Glavina del Rio,T., Shapiro,H., Lindquist,E.,
            Putnam,N. and Rokhsar,D.
  CONSRTM   US DOE Joint Genome Institute (JGI-PGF)
  TITLE     Direct Submission
  JOURNAL   Submitted (19-APR-2008) US DOE Joint Genome Institute, 2800
            Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence is identical to EEN46337.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..509
                     /organism="Branchiostoma floridae"
                     /strain="S238N-H82"
                     /db_xref="taxon:7739"
                     /sex="male"
                     /tissue_type="testes"
                     /country="USA: Old Tampa Bay, Florida"
     Protein         1..509
                     /product="hypothetical protein"
                     /calculated_mol_wt=58209
     Region          79..166
                     /region_name="BTB"
                     /note="BTB/POZ domain; cl02518"
                     /db_xref="CDD:295341"
     Region          79..165
                     /region_name="BTB"
                     /note="Broad-Complex, Tramtrack and Bric a brac;
                     smart00225"
                     /db_xref="CDD:197585"
     Region          253..449
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:278921"
     Region          364..445
                     /region_name="Ion_trans_2"
                     /note="Ion channel; pfam07885"
                     /db_xref="CDD:285168"
     CDS             1..509
                     /locus_tag="BRAFLDRAFT_121378"
                     /coded_by="XM_002590280.1:1..1530"
                     /db_xref="InterPro:IPR003131"
                     /db_xref="InterPro:IPR005821"
                     /db_xref="GeneID:7206819"
ORIGIN      
        1 mqarltaast qlndggeear efpekddskl kslgnalrtg wsrqssrtrr skppagvtgl
       61 lpqivthglt dpgradrrvr inisgmkfdt rervllrypq tllgdvvrrq rfyvpeeeey
      121 ffdrhrpsfe gifryyqtgk ierprnvpqd vfaaelayfd mgklvinkfl kdegydvsen
      181 vlpekepqrt vwilfeshdg ilakfvglit vlfillsvgt scaetlprfr nltdqtfaha
      241 gdvkanlnia fsniffqiet acivwfciel amrfyasprk rrfvkdimni ldfvvilpyf
      301 vdlilivanv dptgsniipa tivrvlrlvr vfrifklsrh mralqmlaat lrasapqlim
      361 lvffmailvv lyssiiyfme mdhpdhffps ipaafwwaii tlttvgygdi ypktpwgkaf
      421 acicvisgil viampmpiit knfekfykkn gnnpfkalpl nngheerddn ssehrkrtya
      481 vrltdietee hesflkdede sssgflssv
//
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