LOCUS XP_002591832 511 aa linear INV 08-OCT-2009
DEFINITION hypothetical protein BRAFLDRAFT_125327 [Branchiostoma floridae].
ACCESSION XP_002591832
VERSION XP_002591832.1 GI:260793666
DBSOURCE REFSEQ: accession XM_002591786.1
KEYWORDS .
SOURCE Branchiostoma floridae (Florida lancelet)
ORGANISM Branchiostoma floridae
Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae;
Branchiostoma.
REFERENCE 1 (residues 1 to 511)
AUTHORS Putnam,N.H., Butts,T., Ferrier,D.E., Furlong,R.F., Hellsten,U.,
Kawashima,T., Robinson-Rechavi,M., Shoguchi,E., Terry,A., Yu,J.K.,
Benito-Gutierrez,E.L., Dubchak,I., Garcia-Fernandez,J.,
Gibson-Brown,J.J., Grigoriev,I.V., Horton,A.C., de Jong,P.J.,
Jurka,J., Kapitonov,V.V., Kohara,Y., Kuroki,Y., Lindquist,E.,
Lucas,S., Osoegawa,K., Pennacchio,L.A., Salamov,A.A., Satou,Y.,
Sauka-Spengler,T., Schmutz,J., Shin-I,T., Toyoda,A.,
Bronner-Fraser,M., Fujiyama,A., Holland,L.Z., Holland,P.W.,
Satoh,N. and Rokhsar,D.S.
TITLE The amphioxus genome and the evolution of the chordate karyotype
JOURNAL Nature 453 (7198), 1064-1071 (2008)
PUBMED 18563158
REFERENCE 2 (residues 1 to 511)
AUTHORS Terry,A., Salamov,A., Zhou,K., Grigoriev,I., Pitluck,S., Lucas,S.,
Detter,J.C., Glavina del Rio,T., Shapiro,H., Lindquist,E.,
Putnam,N. and Rokhsar,D.
CONSRTM US DOE Joint Genome Institute (JGI-PGF)
TITLE Direct Submission
JOURNAL Submitted (19-APR-2008) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence is identical to EEN47843.
Method: conceptual translation.
FEATURES Location/Qualifiers
source 1..511
/organism="Branchiostoma floridae"
/strain="S238N-H82"
/db_xref="taxon:7739"
/sex="male"
/tissue_type="testes"
/country="USA: Old Tampa Bay, Florida"
Protein 1..511
/product="hypothetical protein"
/calculated_mol_wt=58246
Region 17..480
/region_name="PTZ00339"
/note="UDP-N-acetylglucosamine pyrophosphorylase;
Provisional"
/db_xref="CDD:185565"
Region 90..410
/region_name="UDPGlcNAc_PPase"
/note="UDPGlcNAc pyrophosphorylase catalayzes the
synthesis of UDPGlcNAc; cd04193"
/db_xref="CDD:133036"
Site order(108,110..111,165,196,220,222..223,251..252,289..290,
303..304,327,383,407)
/site_type="other"
/note="substrate binding site"
/db_xref="CDD:133036"
Site order(115,285,303..305,373,398)
/site_type="other"
/note="dimerization interface"
/db_xref="CDD:133036"
CDS 1..511
/locus_tag="BRAFLDRAFT_125327"
/coded_by="XM_002591786.1:11..1546"
/db_xref="InterPro:IPR002618"
/db_xref="GeneID:7246324"
ORIGIN
1 mstmdvdllr adlrthgqeh llrywdqldt eqqqslyhdl sntdwarinr cfeeawshss
61 nesklddlmq pihpdkvgsv tragkdlalw reeglkqise gnvcvlllag gqgtrlgvty
121 pkgmfnvglp sqktlyqlqa erilklqkta ydctgkhgii pwyimtseat qgqterffke
181 hdyfgleken vvlfeqstlp amlfdgkvil dqkwkvarap dgngglyral gerkilddma
241 rrqlkyvhvy cvdnilvkma dpvfigfcis kdadcgakvv qkayptepvg vvcrvdgvyq
301 vveyseitlk taekrnpdgt lmfnagnicn hfftleflkt vvseregelk hhiakkkiay
361 vddqgerikp ekpngikmek fvfdvfqfsr kfamfevlre defsplknnd saekdtptta
421 rhalfnlhhr wvllaggrfi eedgthippi psrkedvhey pvvcevspll sysgesleeh
481 vngkefkspl lllstteqnd kepdvkkire d
//