GenomeNet

Database: RefSeq
Entry: XP_002591832
LinkDB: XP_002591832
Original site: XP_002591832 
LOCUS       XP_002591832             511 aa            linear   INV 08-OCT-2009
DEFINITION  hypothetical protein BRAFLDRAFT_125327 [Branchiostoma floridae].
ACCESSION   XP_002591832
VERSION     XP_002591832.1  GI:260793666
DBSOURCE    REFSEQ: accession XM_002591786.1
KEYWORDS    .
SOURCE      Branchiostoma floridae (Florida lancelet)
  ORGANISM  Branchiostoma floridae
            Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae;
            Branchiostoma.
REFERENCE   1  (residues 1 to 511)
  AUTHORS   Putnam,N.H., Butts,T., Ferrier,D.E., Furlong,R.F., Hellsten,U.,
            Kawashima,T., Robinson-Rechavi,M., Shoguchi,E., Terry,A., Yu,J.K.,
            Benito-Gutierrez,E.L., Dubchak,I., Garcia-Fernandez,J.,
            Gibson-Brown,J.J., Grigoriev,I.V., Horton,A.C., de Jong,P.J.,
            Jurka,J., Kapitonov,V.V., Kohara,Y., Kuroki,Y., Lindquist,E.,
            Lucas,S., Osoegawa,K., Pennacchio,L.A., Salamov,A.A., Satou,Y.,
            Sauka-Spengler,T., Schmutz,J., Shin-I,T., Toyoda,A.,
            Bronner-Fraser,M., Fujiyama,A., Holland,L.Z., Holland,P.W.,
            Satoh,N. and Rokhsar,D.S.
  TITLE     The amphioxus genome and the evolution of the chordate karyotype
  JOURNAL   Nature 453 (7198), 1064-1071 (2008)
   PUBMED   18563158
REFERENCE   2  (residues 1 to 511)
  AUTHORS   Terry,A., Salamov,A., Zhou,K., Grigoriev,I., Pitluck,S., Lucas,S.,
            Detter,J.C., Glavina del Rio,T., Shapiro,H., Lindquist,E.,
            Putnam,N. and Rokhsar,D.
  CONSRTM   US DOE Joint Genome Institute (JGI-PGF)
  TITLE     Direct Submission
  JOURNAL   Submitted (19-APR-2008) US DOE Joint Genome Institute, 2800
            Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence is identical to EEN47843.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..511
                     /organism="Branchiostoma floridae"
                     /strain="S238N-H82"
                     /db_xref="taxon:7739"
                     /sex="male"
                     /tissue_type="testes"
                     /country="USA: Old Tampa Bay, Florida"
     Protein         1..511
                     /product="hypothetical protein"
                     /calculated_mol_wt=58246
     Region          17..480
                     /region_name="PTZ00339"
                     /note="UDP-N-acetylglucosamine pyrophosphorylase;
                     Provisional"
                     /db_xref="CDD:185565"
     Region          90..410
                     /region_name="UDPGlcNAc_PPase"
                     /note="UDPGlcNAc pyrophosphorylase catalayzes the
                     synthesis of UDPGlcNAc; cd04193"
                     /db_xref="CDD:133036"
     Site            order(108,110..111,165,196,220,222..223,251..252,289..290,
                     303..304,327,383,407)
                     /site_type="other"
                     /note="substrate binding site"
                     /db_xref="CDD:133036"
     Site            order(115,285,303..305,373,398)
                     /site_type="other"
                     /note="dimerization interface"
                     /db_xref="CDD:133036"
     CDS             1..511
                     /locus_tag="BRAFLDRAFT_125327"
                     /coded_by="XM_002591786.1:11..1546"
                     /db_xref="InterPro:IPR002618"
                     /db_xref="GeneID:7246324"
ORIGIN      
        1 mstmdvdllr adlrthgqeh llrywdqldt eqqqslyhdl sntdwarinr cfeeawshss
       61 nesklddlmq pihpdkvgsv tragkdlalw reeglkqise gnvcvlllag gqgtrlgvty
      121 pkgmfnvglp sqktlyqlqa erilklqkta ydctgkhgii pwyimtseat qgqterffke
      181 hdyfgleken vvlfeqstlp amlfdgkvil dqkwkvarap dgngglyral gerkilddma
      241 rrqlkyvhvy cvdnilvkma dpvfigfcis kdadcgakvv qkayptepvg vvcrvdgvyq
      301 vveyseitlk taekrnpdgt lmfnagnicn hfftleflkt vvseregelk hhiakkkiay
      361 vddqgerikp ekpngikmek fvfdvfqfsr kfamfevlre defsplknnd saekdtptta
      421 rhalfnlhhr wvllaggrfi eedgthippi psrkedvhey pvvcevspll sysgesleeh
      481 vngkefkspl lllstteqnd kepdvkkire d
//
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