GenomeNet

Database: RefSeq
Entry: XP_002631118
LinkDB: XP_002631118
Original site: XP_002631118 
LOCUS       XP_002631118             867 aa            linear   INV 10-DEC-2021
DEFINITION  Protein CBR-VHA-6 [Caenorhabditis briggsae].
ACCESSION   XP_002631118
VERSION     XP_002631118.1
DBLINK      BioProject: PRJNA20855
            BioSample: SAMEA3138181
DBSOURCE    REFSEQ: accession XM_002631072.1
KEYWORDS    RefSeq.
SOURCE      Caenorhabditis briggsae
  ORGANISM  Caenorhabditis briggsae
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1
  AUTHORS   Stein,L.D., Bao,Z., Blasiar,D., Blumenthal,T., Brent,M.R., Chen,N.,
            Chinwalla,A., Clarke,L., Clee,C., Coghlan,A., Coulson,A.,
            D'Eustachio,P., Fitch,D.H., Fulton,L.A., Fulton,R.E.,
            Griffiths-Jones,S., Harris,T.W., Hillier,L.W., Kamath,R.,
            Kuwabara,P.E., Mardis,E.R., Marra,M.A., Miner,T.L., Minx,P.,
            Mullikin,J.C., Plumb,R.W., Rogers,J., Schein,J.E., Sohrmann,M.,
            Spieth,J., Stajich,J.E., Wei,C., Willey,D., Wilson,R.K., Durbin,R.
            and Waterston,R.H.
  TITLE     The genome sequence of Caenorhabditis briggsae: a platform for
            comparative genomics
  JOURNAL   PLoS Biol. 1 (2), E45 (2003)
   PUBMED   14624247
REFERENCE   2  (residues 1 to 867)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-DEC-2021) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (residues 1 to 867)
  AUTHORS   Howe,K.L.
  CONSRTM   WormBase Consortium
  TITLE     Direct Submission
  JOURNAL   Submitted (14-MAR-2012) WormBase Consortium, Wellcome Trust Sanger
            Institute, Hinxton, Cambridge CB10 1SA, UNITED KINGDOM
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence is identical to CAP23708.
FEATURES             Location/Qualifiers
     source          1..867
                     /organism="Caenorhabditis briggsae"
                     /strain="AF16"
                     /db_xref="taxon:6238"
                     /chromosome="II"
     Protein         1..867
                     /product="Protein CBR-VHA-6"
                     /calculated_mol_wt=98862
     Region          28..855
                     /region_name="V_ATPase_I"
                     /note="V-type ATPase 116kDa subunit family; pfam01496"
                     /db_xref="CDD:426290"
     CDS             1..867
                     /gene="Cbr-vha-6"
                     /locus_tag="CBG_02894"
                     /standard_name="CBG02894"
                     /coded_by="XM_002631072.1:1..2604"
                     /note="C. briggsae CBR-VHA-6 protein; contains similarity
                     to Pfam domain PF01496 V-type ATPase 116kDa subunit family
                     contains similarity to Interpro domains IPR002490 (ATPase,
                     V0/A0 complex, 116kDa subunit), IPR020894 (Cadherin
                     conserved site);
                     Predicted"
                     /db_xref="GeneID:8572632"
                     /db_xref="GOA:A8WT97"
                     /db_xref="InterPro:IPR002490"
                     /db_xref="InterPro:IPR026028"
                     /db_xref="UniProtKB/TrEMBL:A8WT97"
ORIGIN      
        1 mgsiyrsehm klcqiffqse sayqcvaelg elgmaqfidl neeqnsyqrk fvnevrrcee
       61 mdrkitfved einkdlvpip dyndhipapq pkhmgemean lekleeellq inkntktlkt
      121 nhiqllemka vlehvtslmd hqskreaams iseaargeag pfsvglkqef dkpvrdenel
      181 kfvtgvikra ksiaferflw rlsrakvfak fvqiqektdl fsheyedkcv filffsgeql
      241 rskvkkicdg fqakcytvpe npaertklln nikiqandmk aviektldyr akcihtaagn
      301 lrkwgimllk vksifhtlnm fsvdvtqkcl iaecwvpead iaqvknslhm gtihsgssvp
      361 ailnemetek ypptyfklnk ftqgfqnivd aygiasyrev npapwtiisf pflfavmfgd
      421 aghgiimlla aagfvifekk lismkikdei fntffggryv vllmgmfaiy tgliyndfys
      481 ksinmfgssw tnpypkslle qmdkqgaesk telsltfppe nafdhgygpy pfgvdpvwnl
      541 atnrlnflnp mkmktsillg isqmafgill slmnhignrs vvdiifvfip qclflgcifv
      601 ylclqvimkw iffyvkpaii fgkfypgsnc apslliglin mfmvksrdpt fafdinngkg
      661 kynatlddgt kytytdydqc ylqqwypnqs lveiilllia vvsvpvmllv kpfyirwrhs
      721 rglpvdlghg pedehgefnf gdvmvhqaih tiefvlgcvs htasylrlwa lslahaqlsd
      781 vlwtmvlrms lkmggwggsa avtiifyfif silsvcilil meglsaflha irlhwvefqs
      841 kfyggtgiqf epfsftkiir vyegldq
//
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