LOCUS XP_002631118 867 aa linear INV 10-DEC-2021
DEFINITION Protein CBR-VHA-6 [Caenorhabditis briggsae].
ACCESSION XP_002631118
VERSION XP_002631118.1
DBLINK BioProject: PRJNA20855
BioSample: SAMEA3138181
DBSOURCE REFSEQ: accession XM_002631072.1
KEYWORDS RefSeq.
SOURCE Caenorhabditis briggsae
ORGANISM Caenorhabditis briggsae
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
Caenorhabditis.
REFERENCE 1
AUTHORS Stein,L.D., Bao,Z., Blasiar,D., Blumenthal,T., Brent,M.R., Chen,N.,
Chinwalla,A., Clarke,L., Clee,C., Coghlan,A., Coulson,A.,
D'Eustachio,P., Fitch,D.H., Fulton,L.A., Fulton,R.E.,
Griffiths-Jones,S., Harris,T.W., Hillier,L.W., Kamath,R.,
Kuwabara,P.E., Mardis,E.R., Marra,M.A., Miner,T.L., Minx,P.,
Mullikin,J.C., Plumb,R.W., Rogers,J., Schein,J.E., Sohrmann,M.,
Spieth,J., Stajich,J.E., Wei,C., Willey,D., Wilson,R.K., Durbin,R.
and Waterston,R.H.
TITLE The genome sequence of Caenorhabditis briggsae: a platform for
comparative genomics
JOURNAL PLoS Biol. 1 (2), E45 (2003)
PUBMED 14624247
REFERENCE 2 (residues 1 to 867)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (10-DEC-2021) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (residues 1 to 867)
AUTHORS Howe,K.L.
CONSRTM WormBase Consortium
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2012) WormBase Consortium, Wellcome Trust Sanger
Institute, Hinxton, Cambridge CB10 1SA, UNITED KINGDOM
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence is identical to CAP23708.
FEATURES Location/Qualifiers
source 1..867
/organism="Caenorhabditis briggsae"
/strain="AF16"
/db_xref="taxon:6238"
/chromosome="II"
Protein 1..867
/product="Protein CBR-VHA-6"
/calculated_mol_wt=98862
Region 28..855
/region_name="V_ATPase_I"
/note="V-type ATPase 116kDa subunit family; pfam01496"
/db_xref="CDD:426290"
CDS 1..867
/gene="Cbr-vha-6"
/locus_tag="CBG_02894"
/standard_name="CBG02894"
/coded_by="XM_002631072.1:1..2604"
/note="C. briggsae CBR-VHA-6 protein; contains similarity
to Pfam domain PF01496 V-type ATPase 116kDa subunit family
contains similarity to Interpro domains IPR002490 (ATPase,
V0/A0 complex, 116kDa subunit), IPR020894 (Cadherin
conserved site);
Predicted"
/db_xref="GeneID:8572632"
/db_xref="GOA:A8WT97"
/db_xref="InterPro:IPR002490"
/db_xref="InterPro:IPR026028"
/db_xref="UniProtKB/TrEMBL:A8WT97"
ORIGIN
1 mgsiyrsehm klcqiffqse sayqcvaelg elgmaqfidl neeqnsyqrk fvnevrrcee
61 mdrkitfved einkdlvpip dyndhipapq pkhmgemean lekleeellq inkntktlkt
121 nhiqllemka vlehvtslmd hqskreaams iseaargeag pfsvglkqef dkpvrdenel
181 kfvtgvikra ksiaferflw rlsrakvfak fvqiqektdl fsheyedkcv filffsgeql
241 rskvkkicdg fqakcytvpe npaertklln nikiqandmk aviektldyr akcihtaagn
301 lrkwgimllk vksifhtlnm fsvdvtqkcl iaecwvpead iaqvknslhm gtihsgssvp
361 ailnemetek ypptyfklnk ftqgfqnivd aygiasyrev npapwtiisf pflfavmfgd
421 aghgiimlla aagfvifekk lismkikdei fntffggryv vllmgmfaiy tgliyndfys
481 ksinmfgssw tnpypkslle qmdkqgaesk telsltfppe nafdhgygpy pfgvdpvwnl
541 atnrlnflnp mkmktsillg isqmafgill slmnhignrs vvdiifvfip qclflgcifv
601 ylclqvimkw iffyvkpaii fgkfypgsnc apslliglin mfmvksrdpt fafdinngkg
661 kynatlddgt kytytdydqc ylqqwypnqs lveiilllia vvsvpvmllv kpfyirwrhs
721 rglpvdlghg pedehgefnf gdvmvhqaih tiefvlgcvs htasylrlwa lslahaqlsd
781 vlwtmvlrms lkmggwggsa avtiifyfif silsvcilil meglsaflha irlhwvefqs
841 kfyggtgiqf epfsftkiir vyegldq
//