GenomeNet

Database: RefSeq
Entry: XP_003028569
LinkDB: XP_003028569
Original site: XP_003028569 
LOCUS       XP_003028569             584 aa            linear   PLN 12-AUG-2010
DEFINITION  hypothetical protein SCHCODRAFT_59812 [Schizophyllum commune H4-8].
ACCESSION   XP_003028569
VERSION     XP_003028569.1
DBSOURCE    REFSEQ: accession XM_003028523.1
KEYWORDS    RefSeq.
SOURCE      Schizophyllum commune H4-8
  ORGANISM  Schizophyllum commune H4-8
            Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina;
            Agaricomycetes; Agaricomycetidae; Agaricales; Schizophyllaceae;
            Schizophyllum.
REFERENCE   1  (residues 1 to 584)
  AUTHORS   Ohm,R.A., de Jong,J.R., Lugones,L.G., Aerts,A., Kothe,E., de
            Vries,R.P., Record,E., Levasseur,A., Baker,S.E., Bartholomew,K.A.,
            Coutinho,P.M., Erdmann,S., Fowler,T.J., Gathman,A.C., Lombard,V.,
            Henrissat,B., Knabe,N., Kues,U., Lilly,W.W., Lindquist,E.,
            Lucas,S., Magnuson,J.K., Piumi,F., Raudaskoski,M., Salamov,A.,
            Schmutz,J., Schwarze,F.W.M.R., Stajich,J.E., van Kuyk,P.A.,
            Horton,J.S., Grigoriev,I.V. and Wosten,H.A.
  CONSRTM   US DOE Joint Genome Institute (JGI-PGF)
  TITLE     Formation of mushrooms and lignocellulose degradation encoded in
            the genome sequence of Schizophyllum commune
  JOURNAL   Unpublished
REFERENCE   2  (residues 1 to 584)
  AUTHORS   Grigoriev,I.V., Aerts,A., Schmutz,J., Lindquist,E., Lucas,S.,
            Salamov,A., Pitluck,S., Ohm,R.A., de Jong,J.F., Lugones,L.G.,
            Levasseur,A., Bartholomew,K.A., Coutinho,P.M., Erdmann,S.,
            Henrissat,B., Kues,U., Lilly,W.W., Magnuson,J.K., Raudaskoski,M.,
            Stajich,J.E., Horton,J.S. and Wosten,H.A.
  CONSRTM   US DOE Joint Genome Institute (JGI-PGF)
  TITLE     Direct Submission
  JOURNAL   Submitted (22-APR-2010) US DOE Joint Genome Institute, 2800
            Mitchell Drive, Walnut Creek, CA 94598-1698, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence is identical to EFI93666.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..584
                     /organism="Schizophyllum commune H4-8"
                     /strain="H4-8"
                     /db_xref="taxon:578458"
                     /chromosome="Unknown"
     Protein         1..584
                     /product="hypothetical protein"
                     /calculated_mol_wt=63872
     Region          8..83
                     /region_name="eIF2D_N"
                     /note="N-terminal domain of eIF2D and related proteins;
                     cd11610"
                     /db_xref="CDD:211423"
     Region          15..183
                     /region_name="PRK14560"
                     /note="putative RNA-binding protein; Provisional"
                     /db_xref="CDD:237757"
     Site            order(30..31,72,74,80..83)
                     /site_type="other"
                     /note="PUA domain interface [polypeptide binding]"
                     /db_xref="CDD:211423"
     Region          66..178
                     /region_name="PUA"
                     /note="PUA domain; cl00607"
                     /db_xref="CDD:294405"
     Region          494..577
                     /region_name="eIF2D_C"
                     /note="C-terminal domain of eIF2D and related proteins;
                     cd11608"
                     /db_xref="CDD:211321"
     Site            order(502,505..506,508,528,531..533,535..537,539,553,556)
                     /site_type="other"
                     /note="putative rRNA binding site [nucleotide binding]"
                     /db_xref="CDD:211321"
     CDS             1..584
                     /locus_tag="SCHCODRAFT_59812"
                     /coded_by="XM_003028523.1:1..1755"
                     /note="similar to hypothetical protein CaO19.4533"
                     /db_xref="InterPro:IPR001950"
                     /db_xref="InterPro:IPR002478"
                     /db_xref="JGIDB:Schco1_59812"
                     /db_xref="GeneID:9590368"
ORIGIN      
        1 mfkkplghlk tssalrssdr rklkqrvist fgcsaedgdv lvpegiqsik ftthmdapgv
       61 ayldaddtpl wfslgkagdd liptvytlwk rpellpfvtt psqvisilig gadlmrpgvt
      121 syipglqkgq lvavrrligg aspkvsppla vghmalssde lkedhkgkav lithtwkdhl
      181 wemgpktepp edtpltapta dvgdangssk epdatptlkg pvytpaevsq llhlalvqsi
      241 atsppssfpv psntfyashv lpsrpafpdl vlppatspan ldsaalrqei slktsshksl
      301 aaflkaaeka glltvkatpk qkndvmvtsv ntthpdvtth rqfptvreve ereakreark
      361 eelsakeear gsmleatelw kphmhtvplf vdwglstseq ytfpelkrif nnwleahpea
      421 inpherayis lkvpaasslv aaayppnkkg tppapefakr edilrdlikq mqpwyevkha
      481 ngervtrkkg tlkpvnvahk irqgrkaati itgfepfema vnseemaedl rkicasatsv
      541 apgpnkqlev lvqgkqaktv veylvkkgip knwiqtedqt kgkk
//
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