GenomeNet

Database: RefSeq
Entry: XP_004984367
LinkDB: XP_004984367
Original site: XP_004984367 
LOCUS       XP_004984367             152 aa            linear   PLN 13-OCT-2017
DEFINITION  superoxide dismutase [Cu-Zn] 4A [Setaria italica].
ACCESSION   XP_004984367
VERSION     XP_004984367.1
DBLINK      BioProject: PRJNA207554
DBSOURCE    REFSEQ: accession XM_004984310.3
KEYWORDS    RefSeq.
SOURCE      Setaria italica (foxtail millet)
  ORGANISM  Setaria italica
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD
            clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_028458.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Version          :: Setaria italica Annotation Release
                                           103
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 7.4
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Setaria italica"
                     /strain="Yugu1"
                     /db_xref="taxon:4555"
                     /chromosome="IX"
     Protein         1..152
                     /product="superoxide dismutase [Cu-Zn] 4A"
                     /calculated_mol_wt=15021
     Region          1..152
                     /region_name="PLN02386"
                     /note="superoxide dismutase [Cu-Zn]"
                     /db_xref="CDD:166027"
     Site            order(5,7,17,19,49..51,112..113)
                     /site_type="other"
                     /note="E-class dimer interface [polypeptide binding]"
                     /db_xref="CDD:238186"
     Site            order(29,87)
                     /site_type="other"
                     /note="P-class dimer interface [polypeptide binding]"
                     /db_xref="CDD:238186"
     Site            order(45,47,62,79,82,119)
                     /site_type="active"
                     /db_xref="CDD:238186"
     Site            order(45,47,62,119)
                     /site_type="other"
                     /note="Cu2+ binding site [ion binding]"
                     /db_xref="CDD:238186"
     Site            order(62,70,79,82)
                     /site_type="other"
                     /note="Zn2+ binding site [ion binding]"
                     /db_xref="CDD:238186"
     CDS             1..152
                     /gene="LOC101754996"
                     /coded_by="XM_004984310.3:171..629"
                     /db_xref="GeneID:101754996"
ORIGIN      
        1 mvkavvvlgs segvkgtiyf tqegdgpttv tgsvsglkpg lhgfhvhalg dttngcmstg
       61 phynpagkeh gapeddnrha gdlgnvtaga dgvanihvtd sqipltgpns iigravvvha
      121 dpddlgkggh elskstgnag griacgiigl qg
//
DBGET integrated database retrieval system