LOCUS XP_004984367 152 aa linear PLN 13-OCT-2017
DEFINITION superoxide dismutase [Cu-Zn] 4A [Setaria italica].
ACCESSION XP_004984367
VERSION XP_004984367.1
DBLINK BioProject: PRJNA207554
DBSOURCE REFSEQ: accession XM_004984310.3
KEYWORDS RefSeq.
SOURCE Setaria italica (foxtail millet)
ORGANISM Setaria italica
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD
clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NC_028458.1) annotated using gene prediction method: Gnomon,
supported by EST evidence.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Setaria italica Annotation Release
103
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 7.4
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..152
/organism="Setaria italica"
/strain="Yugu1"
/db_xref="taxon:4555"
/chromosome="IX"
Protein 1..152
/product="superoxide dismutase [Cu-Zn] 4A"
/calculated_mol_wt=15021
Region 1..152
/region_name="PLN02386"
/note="superoxide dismutase [Cu-Zn]"
/db_xref="CDD:166027"
Site order(5,7,17,19,49..51,112..113)
/site_type="other"
/note="E-class dimer interface [polypeptide binding]"
/db_xref="CDD:238186"
Site order(29,87)
/site_type="other"
/note="P-class dimer interface [polypeptide binding]"
/db_xref="CDD:238186"
Site order(45,47,62,79,82,119)
/site_type="active"
/db_xref="CDD:238186"
Site order(45,47,62,119)
/site_type="other"
/note="Cu2+ binding site [ion binding]"
/db_xref="CDD:238186"
Site order(62,70,79,82)
/site_type="other"
/note="Zn2+ binding site [ion binding]"
/db_xref="CDD:238186"
CDS 1..152
/gene="LOC101754996"
/coded_by="XM_004984310.3:171..629"
/db_xref="GeneID:101754996"
ORIGIN
1 mvkavvvlgs segvkgtiyf tqegdgpttv tgsvsglkpg lhgfhvhalg dttngcmstg
61 phynpagkeh gapeddnrha gdlgnvtaga dgvanihvtd sqipltgpns iigravvvha
121 dpddlgkggh elskstgnag griacgiigl qg
//