LOCUS XP_008864853 2172 aa linear PLN 18-AUG-2014
DEFINITION hypothetical protein H310_02935 [Aphanomyces invadans].
ACCESSION XP_008864853
VERSION XP_008864853.1
DBLINK BioProject: PRJNA258292
BioSample: SAMN01907307
DBSOURCE REFSEQ: accession XM_008866631.1
KEYWORDS RefSeq.
SOURCE Aphanomyces invadans
ORGANISM Aphanomyces invadans
Eukaryota; Sar; Stramenopiles; Oomycota; Saprolegniales;
Saprolegniaceae; Aphanomyces.
REFERENCE 1 (residues 1 to 2172)
AUTHORS Russ,C., Tyler,B., van West,P., Dieguez-Uribeondo,J., Young,S.K.,
Zeng,Q., Gargeya,S., Fitzgerald,M., Abouelleil,A., Alvarado,L.,
Chapman,S.B., Gainer-Dewar,J., Goldberg,J., Griggs,A., Gujja,S.,
Hansen,M., Howarth,C., Imamovic,A., Ireland,A., Larimer,J.,
McCowan,C., Murphy,C., Pearson,M., Poon,T.W., Priest,M.,
Roberts,A., Saif,S., Shea,T., Sykes,S., Wortman,J., Nusbaum,C. and
Birren,B.
CONSRTM The Broad Institute Genomics Platform
TITLE The Genome Sequence of Aphanomyces invadans NJM9701
JOURNAL Unpublished
REFERENCE 2 (residues 1 to 2172)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (18-AUG-2014) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (residues 1 to 2172)
AUTHORS Russ,C., Tyler,B., van West,P., Dieguez-Uribeondo,J., Young,S.K.,
Zeng,Q., Gargeya,S., Fitzgerald,M., Abouelleil,A., Alvarado,L.,
Chapman,S.B., Gainer-Dewar,J., Goldberg,J., Griggs,A., Gujja,S.,
Hansen,M., Howarth,C., Imamovic,A., Ireland,A., Larimer,J.,
McCowan,C., Murphy,C., Pearson,M., Poon,T.W., Priest,M.,
Roberts,A., Saif,S., Shea,T., Sykes,S., Wortman,J., Nusbaum,C. and
Birren,B.
CONSRTM The Broad Institute Genomics Platform
TITLE Direct Submission
JOURNAL Submitted (02-DEC-2013) Broad Institute of MIT and Harvard, 7
Cambridge Center, Cambridge, MA 02142, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence is identical to ETW06778.
Method: conceptual translation.
FEATURES Location/Qualifiers
source 1..2172
/organism="Aphanomyces invadans"
/strain="NJM9701"
/db_xref="taxon:157072"
/chromosome="Unknown"
/collection_date="2012"
Protein 1..2172
/product="hypothetical protein"
/calculated_mol_wt=245576
Region <93..245
/region_name="Ion_trans"
/note="Ion transport protein; pfam00520"
/db_xref="CDD:425730"
Region 332..442
/region_name="CAP_ED"
/note="effector domain of the CAP family of transcription
factors; members include CAP (or cAMP receptor protein
(CRP)), which binds cAMP, FNR (fumarate and nitrate
reduction), which uses an iron-sulfur cluster to sense
oxygen) and CooA, a heme containing CO...; cd00038"
/db_xref="CDD:237999"
Site order(395..396,406..408)
/site_type="other"
/note="ligand binding site [chemical binding]"
/db_xref="CDD:237999"
Site order(428..430,438..440)
/site_type="other"
/note="flexible hinge region"
/db_xref="CDD:237999"
Region 495..738
/region_name="Ion_trans"
/note="Ion transport protein; pfam00520"
/db_xref="CDD:425730"
Region 1470..1579
/region_name="CAP_ED"
/note="effector domain of the CAP family of transcription
factors; members include CAP (or cAMP receptor protein
(CRP)), which binds cAMP, FNR (fumarate and nitrate
reduction), which uses an iron-sulfur cluster to sense
oxygen) and CooA, a heme containing CO...; cd00038"
/db_xref="CDD:237999"
Site order(1534..1535,1544..1546)
/site_type="other"
/note="ligand binding site [chemical binding]"
/db_xref="CDD:237999"
Site order(1566..1568,1572..1574)
/site_type="other"
/note="flexible hinge region"
/db_xref="CDD:237999"
Region 1636..>1886
/region_name="PLN03192"
/note="Voltage-dependent potassium channel; Provisional"
/db_xref="CDD:215625"
Region 1990..2117
/region_name="CAP_ED"
/note="effector domain of the CAP family of transcription
factors; members include CAP (or cAMP receptor protein
(CRP)), which binds cAMP, FNR (fumarate and nitrate
reduction), which uses an iron-sulfur cluster to sense
oxygen) and CooA, a heme containing CO...; cd00038"
/db_xref="CDD:237999"
Site order(2063..2064,2077..2079)
/site_type="other"
/note="ligand binding site [chemical binding]"
/db_xref="CDD:237999"
CDS 1..2172
/locus_tag="H310_02935"
/coded_by="XM_008866631.1:83..6601"
/db_xref="GeneID:20079985"
ORIGIN
1 mvqvkfhgva cvlgltavlv nmftlplrgl vvptvelldt pwallavdyt wdaimltlfv
61 vqlalwrpss sttsafasla aaattsphrv rlwieclafl pvdliahagg frgnfgvwrl
121 nhvvailpfl rylritegyf wrvsvqmrrt lyiltilpmw shwfaciwfy vayverhdsy
181 swlkqsmype fyntstatty lrsiywsatm lttvgfgdvt avtrgetlvs ilviymgili
241 scasiacvlk lmehadrnqm alqerlddvc gylewrhasd dlvdraltsv rasfvpqiet
301 traelatqlp yalrarlqie heevlvhtvp rfhtasktlr aaisehviyv skapgdivvv
361 asqplgglyl lrrgdatyvd ggavvkaldi heyfgedalf sedhvaqytv vctsgcefvy
421 larehfqdmw qleqdrhpdt ardedgnddd sggghilakh tattmdssaa tagstsrrrr
481 crvtsadwlp nsmfrrvwtl vcfggllyni yavprdcaff rshnrfeapd aealvdlglf
541 wgfdvlflvd fflhcrrfyv ehdghvvtdr rrvfrryirs vwcwidltsi lpldvvcvcg
601 whsmrdlaff rvnkivrilh lteyfevaea lllsrlhvhv ftrrifrims ilvlsgyvvg
661 cfwyyvaeit atdypdanwv dldqsnpqfy fqsyahnrfy lvrsmyfgyi ggstlgfgdi
721 vpvnpyetmi atvmllygai lkpalvggva sllltrnkaq vthqkmlvgf kwlvashklp
781 erlqdrvlgy fefmweheyy ekeaaileyv pelrweivqt mcrntdpsay ffrhvnedgm
841 ravyaamepq lciphdaidv prgslgilvs glvvvhgciq stsnngnaie rgiqaeavae
901 fvveidsves ldrrtfglas flefgaendg aaatkvpamp sltyragsef cevlwlrakd
961 vaailgtqms twkslrrdmq vhldatmhhy amnelekdgr dgvqrtvvdl mttamvklgd
1021 iamkstlshl trsaapsssa hvvplppsdh vsttdatfpa tpalsprsrk lktckgpvvk
1081 wtptskasle kdalvhsrfh pksrfrrvln vlvvlallyn aflvpfrlaf fsslqpasyl
1141 ygfvvdyvld glflvdiavk yryhllrlrq dtsvlsisfh wavwhslkwd ivcgfpvelf
1201 viefvrrhpd qlvavltvcr lpkvfrlryf tirirelaqs airnkpqwsd vvvvcryflf
1261 ilffshllac gwhyvafadk gifpwstdcs trdnangagd sdavtaeatc lfagtwieyq
1321 ihgmylpkdg gtiwerysrc fnyaiqmllv vssgiivpvn mvetivciga ifagiffsag
1381 kigvigeiil kvdaastsir qatdalakym afhkvpqpmt dkalgfmefl yrkrrkllfq
1441 edeivgmlpr qlrdaivdhi khtrlmqsdl fahlpsdvva avakhlksrs vapgdelvge
1501 lrynrcmyfv kpgsvqyqdp tiptkhskrl gvfgerslll dephphtica cvftevfvlr
1561 etgmdavfda fpelkqqlld rlddatnghg ddavdgaplt vdiksdesat velqhrhaar
1621 rtsdshderm desavartwi epdsrfrrmw dgilfwttly ilivlplrat ylvedrvdsl
1681 helvvwyggd vlaqvlyald tywsynwfaf mdhsklirhr akirenyrsy lvldlvsiap
1741 yclgsfvvgl palkflvmpl llrakrfpry lrrfsrnfqf flcrvsgsml hilhcilyyv
1801 imvhwwacvw mllhryvekh saltwavrdp ymgggklsvw deatgehnic tsmidcyvra
1861 yyfvitfigt vglgdirtgg hleyffenve alcgsfffaa ltscfasyfq fadtfgrgat
1921 qaklstlasy frvahttkpt traivanmkl wchrtggglv ehavaaylpv plrveiatyv
1981 qrhlltsssa ltscdayirh rlvlalqfqv viggtamyea gdsldevafv ssgsvklvva
2041 psasgndtva vppsalrhrv vvgesgchvg rgeagpcpha isalehvely vldamgkrev
2101 lghmprenrq aflemldgts lhatamadhp ngspkrspma kprtvdeded emvvsedddd
2161 aawlampqsf fk
//
