LOCUS XP_012194581 2373 aa linear PLN 22-APR-2015
DEFINITION hypothetical protein SPRG_00987 [Saprolegnia parasitica CBS
223.65].
ACCESSION XP_012194581
VERSION XP_012194581.1
DBLINK BioProject: PRJNA280969
BioSample: SAMN02981252
DBSOURCE REFSEQ: accession XM_012339191.1
KEYWORDS RefSeq.
SOURCE Saprolegnia parasitica CBS 223.65
ORGANISM Saprolegnia parasitica CBS 223.65
Eukaryota; Sar; Stramenopiles; Oomycota; Saprolegniales;
Saprolegniaceae; Saprolegnia.
REFERENCE 1 (residues 1 to 2373)
AUTHORS Jiang,R.H., de Bruijn,I., Haas,B.J., Belmonte,R., Lobach,L.,
Christie,J., van den Ackerveken,G., Bottin,A., Bulone,V.,
Diaz-Moreno,S.M., Dumas,B., Fan,L., Gaulin,E., Govers,F.,
Grenville-Briggs,L.J., Horner,N.R., Levin,J.Z., Mammella,M.,
Meijer,H.J., Morris,P., Nusbaum,C., Oome,S., Phillips,A.J., van
Rooyen,D., Rzeszutek,E., Saraiva,M., Secombes,C.J., Seidl,M.F.,
Snel,B., Stassen,J.H., Sykes,S., Tripathy,S., van den Berg,H.,
Vega-Arreguin,J.C., Wawra,S., Young,S.K., Zeng,Q.,
Dieguez-Uribeondo,J., Russ,C., Tyler,B.M. and van West,P.
TITLE Distinctive expansion of potential virulence genes in the genome of
the oomycete fish pathogen Saprolegnia parasitica
JOURNAL PLoS Genet. 9 (6), E1003272 (2013)
PUBMED 23785293
REFERENCE 2 (residues 1 to 2373)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (22-APR-2015) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (residues 1 to 2373)
AUTHORS Russ,C., Nusbaum,C., Tyler,B., van West,P., Dieguez-Uribeondo,J.,
de Bruijn,I., Young,S.K., Zeng,Q., Gargeya,S., Alvarado,L.,
Berlin,A., Chapman,S.B., Chen,Z., Freedman,E., Gellesch,M.,
Goldberg,J., Griggs,A., Gujja,S., Heilman,E., Heiman,D.,
Howarth,C., Mehta,T., Neiman,D., Pearson,M., Roberts,A., Saif,S.,
Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J.,
Yandava,C., Haas,B. and Birren,B.
CONSRTM The Broad Institute Genome Sequencing Platform
TITLE Direct Submission
JOURNAL Submitted (14-FEB-2011) Broad Institute of MIT and Harvard, 7
Cambridge Center, Cambridge, MA 02142, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence is identical to KDO34925.
Method: conceptual translation.
FEATURES Location/Qualifiers
source 1..2373
/organism="Saprolegnia parasitica CBS 223.65"
/strain="CBS 223.65"
/db_xref="taxon:695850"
/chromosome="Unknown"
Protein 1..2373
/product="hypothetical protein"
/calculated_mol_wt=269500
Region 170..>534
/region_name="PLN03192"
/note="Voltage-dependent potassium channel; Provisional"
/db_xref="CDD:215625"
Region 448..544
/region_name="CAP_ED"
/note="effector domain of the CAP family of transcription
factors; members include CAP (or cAMP receptor protein
(CRP)), which binds cAMP, FNR (fumarate and nitrate
reduction), which uses an iron-sulfur cluster to sense
oxygen) and CooA, a heme containing CO...; cd00038"
/db_xref="CDD:237999"
Site order(507..508,517..519)
/site_type="other"
/note="ligand binding site [chemical binding]"
/db_xref="CDD:237999"
Region <765..>1068
/region_name="PLN03192"
/note="Voltage-dependent potassium channel; Provisional"
/db_xref="CDD:215625"
Region 960..1069
/region_name="CAP_ED"
/note="effector domain of the CAP family of transcription
factors; members include CAP (or cAMP receptor protein
(CRP)), which binds cAMP, FNR (fumarate and nitrate
reduction), which uses an iron-sulfur cluster to sense
oxygen) and CooA, a heme containing CO...; cd00038"
/db_xref="CDD:237999"
Site order(1024..1025,1034..1036)
/site_type="other"
/note="ligand binding site [chemical binding]"
/db_xref="CDD:237999"
Site order(1056..1058,1062..1064)
/site_type="other"
/note="flexible hinge region"
/db_xref="CDD:237999"
Region 1123..>1287
/region_name="Ion_trans"
/note="Ion transport protein; pfam00520"
/db_xref="CDD:425730"
Region 1439..1539
/region_name="CAP_ED"
/note="effector domain of the CAP family of transcription
factors; members include CAP (or cAMP receptor protein
(CRP)), which binds cAMP, FNR (fumarate and nitrate
reduction), which uses an iron-sulfur cluster to sense
oxygen) and CooA, a heme containing CO...; cd00038"
/db_xref="CDD:237999"
Site order(1505..1506,1516..1518)
/site_type="other"
/note="ligand binding site [chemical binding]"
/db_xref="CDD:237999"
Region 1822..>2262
/region_name="PLN03192"
/note="Voltage-dependent potassium channel; Provisional"
/db_xref="CDD:215625"
Region 2158..2268
/region_name="CAP_ED"
/note="effector domain of the CAP family of transcription
factors; members include CAP (or cAMP receptor protein
(CRP)), which binds cAMP, FNR (fumarate and nitrate
reduction), which uses an iron-sulfur cluster to sense
oxygen) and CooA, a heme containing CO...; cd00038"
/db_xref="CDD:237999"
Site order(2223..2224,2233..2235)
/site_type="other"
/note="ligand binding site [chemical binding]"
/db_xref="CDD:237999"
Site order(2255..2257,2261..2263)
/site_type="other"
/note="flexible hinge region"
/db_xref="CDD:237999"
CDS 1..2373
/locus_tag="SPRG_00987"
/coded_by="XM_012339191.1:1..7122"
/db_xref="GeneID:24123602"
ORIGIN
1 mwsnvagflr rkanelrfgk rpprrrhrvv arrkyghlre flyvlfynlq llcylffipl
61 rlgfvfdpfl shasphmdan dglfyaidva tdafglvnfy ylsryhrgmy nrpmsfsqhs
121 shrttatsra pgrlasmaar ansekaiskp esgpiaarhl hfmgtlsgrt lahisrfqll
181 leaaalipfe fvcyaafgin glhlaripkl lrlhngrrcl aalktvlsry pcfarlnntp
241 vsflvmlmvt hlslfhlvsa aymllahvec gvhldqcqgg ggtsghrqls gggptlaega
301 ptcwvlqgql qgghiwdqyi rtlvtvafgd afaytfaegc fgiviqllra lmscaliggf
361 elvfghynsr rstyvalled artytqsrkl peklrikilg yfdyfwrvql gilennvvas
421 lpahfqmqct qvlkaslisk vyflakespn viqnlasllt sqvfmpmdwi tktvhvremy
481 liargkvflv ddsqkiiskl tqgdafgeit lfvedafayk alaetfcely qlntdvfhtv
541 idayytetsv alqrkaewqe aieardhqml ktqkllnqge tllsvmrhah skegrwvlph
601 skfrsrwsml hlcsliymav eipyklifqt kddvdssigi tlvftasvln elfyvlaitf
661 haryfafldt ssvvttapvt dadlifahyk esnawrydlv ailpiaiigd ampyewgafv
721 vylrlfrllr lvrlrqlqdv lsgvleehri ssalqtvvyl slgvllvthv agclwflian
781 iqtphaaaea klwtsdeitr arcshdgavf anctwflydq vhhphnseya rallwsvvsl
841 ttvgfgpifp ystaeytyac lwfyisclin fgvigaissa iaqmmanenr sqdrltqinr
901 fmryrnvspl vqhqvrryyk nqwvrekgvn eeaflsilpd nlqheiltfl haqtfermai
961 fdgvsdeckq iiatiirhet yqagdviahq gdmgadlyvv rsgtvevfek ttpiqvlhag
1021 acfgeanfvl empyamsira mtatelsvlr rhefeqiikf ypeeweiiyd qgidvhesvd
1081 aawstikanl ardkivsfak sttslfvmpp rdagvippqs rvrrlweamv vllmvynalq
1141 iifrisflrr psdathtllt vvdylcdvvf lvdiylkynh faynnesggd lsraesrhyy
1201 rsryllydva asapiyyvgd pfamtlcrlp rllrclqlpe lidalqtglq erfvsarvta
1261 vlrlfkllmi ltifahytga fffiisnpgg ylphtehllv eneimewhlk dpvikshhvt
1321 atdyrdidpi tnipsyytsi acfagfffvg qvigrltsii anmdkeahdf elrienyney
1381 grsqklpkfl lergheyfef qfectrgmea daifadlphs lrlklyydly gkrlrdialf
1441 ysfdsatlaa iaerlfpvlf lphdnilieg gtgvslfimn qgraeqyvra cnlvvaavpe
1501 gsvfgevaff ipdvthltsv rastccevfr lehadwlalw pterrselea difphvaakh
1561 aylkvalsni ltnltyiegi sspnakvrkh mvsnnlrrvs sygqrrlnim rttlgfkksn
1621 tgrvlpvind ntatiatagr psrengkgrs frersmsviq qkiqavkttn elrkkliadq
1681 rrreqrtavl mrsltreegd lddvdedeld dlddldndda thggtnskav pgllmprssw
1741 iesrdkvlet gstpevtpri edilldkhqa gnhfdhldvl rraslrletp hksseaarvs
1801 iwaevkmppw wthphsifra swdqllfait lyyaialplr acfvqdvllh evygvdawmy
1861 aeyvldvicl vdvvlrwgff crmihgeles dtallraeyf hkdgyvydai aavpcevlal
1921 vmpssvwget yslvhavsll rlnklarlvh ipaysakard llmlrfksis wlglflsfln
1981 iwgifllcgh wiaciwfyvs lhsplpvpsi qvmaghvsfv eplsvaylrt fyfaattlts
2041 vafgdsratt pfetvmvifl ifvgllaygi ltgglseife eefknlvtfe dhlgvvstfl
2101 vhrqfprpvv lqimeyfrml wersegiven qalaplssai rediavyvkr dlitkvklfa
2161 ecdqdftrai vavlqaefyv akdviiregd yersmyfihm gfvlvtnnak syevvkqkgd
2221 yfgersllhn tprsatcsai sncemyileh aayeytlerf peyrarnlkt wcsvpalpta
2281 sgtedvagps samvpempsv aeepplkqag hgevgssekm rrlsnmsqlh slsrrptrhd
2341 gspisvltga tslkklvplg prvrgvrdsy gks
//
