GenomeNet

Database: RefSeq
Entry: XP_013840046
LinkDB: XP_013840046
Original site: XP_013840046 
LOCUS       XP_013840046             379 aa            linear   MAM 13-MAY-2017
DEFINITION  sialidase-2 [Sus scrofa].
ACCESSION   XP_013840046
VERSION     XP_013840046.1
DBLINK      BioProject: PRJNA28993
DBSOURCE    REFSEQ: accession XM_013984592.2
KEYWORDS    RefSeq.
SOURCE      Sus scrofa (pig)
  ORGANISM  Sus scrofa
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae;
            Sus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_010457.5) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Version          :: Sus scrofa Annotation Release 106
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 7.4
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..379
                     /organism="Sus scrofa"
                     /isolate="TJ Tabasco"
                     /db_xref="taxon:9823"
                     /chromosome="15"
                     /sex="female"
                     /breed="Duroc"
     Protein         1..379
                     /product="sialidase-2"
                     /calculated_mol_wt=41750
     Region          10..367
                     /region_name="Sialidase_non-viral"
                     /note="Non-viral sialidases; cd15482"
                     /db_xref="CDD:271234"
     Region          20..74
                     /region_name="Sialidase propeller 1"
                     /note="Sialidase propeller 1 [structural motif]"
                     /db_xref="CDD:271234"
     Site            order(21,47,218,237,303,333,354)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:271234"
     Region          84..142
                     /region_name="Sialidase propeller 2"
                     /note="Sialidase propeller 2 [structural motif]"
                     /db_xref="CDD:271234"
     Region          156..211
                     /region_name="Sialidase propeller 3"
                     /note="Sialidase propeller 3 [structural motif]"
                     /db_xref="CDD:271234"
     Region          217..258
                     /region_name="Sialidase propeller 4"
                     /note="Sialidase propeller 4 [structural motif]"
                     /db_xref="CDD:271234"
     Region          270..326
                     /region_name="Sialidase propeller 5"
                     /note="Sialidase propeller 5 [structural motif]"
                     /db_xref="CDD:271234"
     Region          332..367
                     /region_name="Sialidase propeller 6"
                     /note="Sialidase propeller 6 [structural motif]"
                     /db_xref="CDD:271234"
     CDS             1..379
                     /gene="NEU2"
                     /coded_by="XM_013984592.2:330..1469"
                     /db_xref="GeneID:100738467"
ORIGIN      
        1 mascpvlhke tvfqtgahay ripallylpq qktllafaek raskkdehak livlrrgsyd
       61 astrqvrwhp qeavaqaqle ghrsmnpspl ydkktgtlfl ffiaipgqvs ehhqlqtrvn
      121 ltrlcqvtst dhgrswspar dltdsvigpa hkdwatfavg pghclqlhnq tqsllvpaya
      181 yrnlpfprap apsafclvsh dhghtwargs fvaldtlecq vaevgdaeqr vvylnarsrl
      241 qarvqaqstn ggldfgetqp vkqlvepphg cqgsiisfps prggpdsphq wllythptdp
      301 krrsnlgvyl nrqapaplaw sepallatgs caysdlqsmg agpdgspqfg clyesndyee
      361 ivfvmftlkq afpaafllq
//
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