GenomeNet

Database: RefSeq
Entry: XP_017430989
LinkDB: XP_017430989
Original site: XP_017430989 
LOCUS       XP_017430989             931 aa            linear   PLN 28-DEC-2022
DEFINITION  endo-1,4-beta-xylanase 1 isoform X1 [Vigna angularis].
ACCESSION   XP_017430989
VERSION     XP_017430989.2
DBLINK      BioProject: PRJNA911773
DBSOURCE    REFSEQ: accession XM_017575500.2
KEYWORDS    RefSeq.
SOURCE      Vigna angularis (adzuki bean)
  ORGANISM  Vigna angularis
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50
            kb inversion clade; NPAAA clade; indigoferoid/millettioid clade;
            Phaseoleae; Vigna.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_068976) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 28, 2022 this sequence version replaced XP_017430989.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_016808095.1-RS_2022_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..931
                     /organism="Vigna angularis"
                     /cultivar="LongXiaoDou No.4"
                     /db_xref="taxon:3914"
                     /chromosome="7"
                     /tissue_type="leaf"
                     /dev_stage="squaring stage"
                     /country="China: Harbin, Heilongjiang"
     Protein         1..931
                     /product="endo-1,4-beta-xylanase 1 isoform X1"
                     /calculated_mol_wt=103164
     Region          43..185
                     /region_name="CBM_4_9"
                     /note="Carbohydrate binding domain; pfam02018"
                     /db_xref="CDD:396553"
     Region          217..356
                     /region_name="CBM_4_9"
                     /note="Carbohydrate binding domain; pfam02018"
                     /db_xref="CDD:396553"
     Region          387..532
                     /region_name="CBM_4_9"
                     /note="Carbohydrate binding domain; pfam02018"
                     /db_xref="CDD:396553"
     Region          625..871
                     /region_name="Glyco_10"
                     /note="Glycosyl hydrolase family 10; smart00633"
                     /db_xref="CDD:214750"
     CDS             1..931
                     /gene="LOC108338554"
                     /coded_by="XM_017575500.2:702..3497"
                     /db_xref="GeneID:108338554"
ORIGIN      
        1 mkrfsaccft sriskfhsqr khnqsqsqim agnmsdssgs kganillnhd fsrglnswhl
       61 nsctgyvisa esgaqggism elganyvvit drkecwqgle qditdristg ytytvlacvg
      121 vssvsqgssd vlatlkleyh dsatsylfig rtsvnkdswe klegkfslst mpdrvvfyle
      181 gpapgvdlli rsveincsts nnnkttgpac vsagdeniii npqfddglnn wsgrgckivl
      241 hdsmndgkiv pksgkffasa tertqnwngi qqditgrvqr klayevtalv rifgnnvsta
      301 dvratlwvqa pdlkeqyigi anlqatdkdw vtlqgkflln gspskvvlyl egpppgtdil
      361 lnnlvlkhaa ktppstppdv knvtfgvnii qnsnladgtn gwfplgnctl svksgsphii
      421 ppmardslgp hellngryil vtnrtqtwmg paqiitdkvk lfltyqvsaw vrigsgssgp
      481 qnvnvalgvd nqwvnggqte vsddtwheig gsfriekqps kvmvyvqgpa sgvdlmvagl
      541 qifpvdrhar frylkiqtdk irkrevvlkf sgldsgsyan tsvqvrqtqn dfpigtcisr
      601 snidnedfvd fmvkhfnwav fgnelkwywt epqqgnfnyk daddlislcq khniqtrghc
      661 ifwdvdgvvq qwikslnnnd lmtavqnrln glltrykgkf shydvnneml hgsffqdrlg
      721 kdiranmfkt anqldpsatl fvndyhvedg cdtrscpdky ihhildlqeq gapvggigiq
      781 ghidspigpi vsssldklgi lglpiwftel dvssineyvr addlevmlre amahpavegi
      841 mlwgfwelfm srdnahlvna egdineagkr flalkqewls hsrghvdeqg qynlrgfhgt
      901 ynvqvvtpsk kisktfvldk gdtplvvsid l
//
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