GenomeNet

Database: RefSeq
Entry: XP_017451791
LinkDB: XP_017451791
Original site: XP_017451791 
LOCUS       XP_017451791             379 aa            linear   ROD 11-JUN-2023
DEFINITION  sialidase-2 isoform X1 [Rattus norvegicus].
ACCESSION   XP_017451791
VERSION     XP_017451791.1
DBLINK      BioProject: PRJNA677964
DBSOURCE    REFSEQ: accession XM_017596302.2
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..379
                     /organism="Rattus norvegicus"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /country="USA: Wisconsin, Milwaukee, Medical College of
                     Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     Protein         1..379
                     /product="sialidase-2 isoform X1"
                     /calculated_mol_wt=42304
     Region          10..367
                     /region_name="Sialidase_non-viral"
                     /note="Non-viral sialidases; cd15482"
                     /db_xref="CDD:271234"
     Region          20..74
                     /region_name="Sialidase propeller 1"
                     /note="Sialidase propeller 1 [structural motif]"
                     /db_xref="CDD:271234"
     Site            order(21,47,218,237,303,333,354)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:271234"
     Region          84..142
                     /region_name="Sialidase propeller 2"
                     /note="Sialidase propeller 2 [structural motif]"
                     /db_xref="CDD:271234"
     Region          156..211
                     /region_name="Sialidase propeller 3"
                     /note="Sialidase propeller 3 [structural motif]"
                     /db_xref="CDD:271234"
     Region          217..258
                     /region_name="Sialidase propeller 4"
                     /note="Sialidase propeller 4 [structural motif]"
                     /db_xref="CDD:271234"
     Region          270..326
                     /region_name="Sialidase propeller 5"
                     /note="Sialidase propeller 5 [structural motif]"
                     /db_xref="CDD:271234"
     Region          332..367
                     /region_name="Sialidase propeller 6"
                     /note="Sialidase propeller 6 [structural motif]"
                     /db_xref="CDD:271234"
     CDS             1..379
                     /gene="Neu2"
                     /coded_by="XM_017596302.2:129..1268"
                     /db_xref="GeneID:29204"
                     /db_xref="RGD:3164"
ORIGIN      
        1 metcpvlqke tlfhtevyay ripallylkk qktllafaek rasrtdehae livlrrgsyn
       61 gatnhvkwqp eevvtqaqle ghrsmnpcpl ydkqtktlfl ffiavpgrvs eqhqlqtrvn
      121 vtrlcrvtst dygmnwspvq dltettigst hqdwatfavg pghclqlrnr agsllvpaya
      181 yqklhpvhkp tpfafcfisl dhghtwelgn fvsenslecq vaevgtgahr vvylnarsfi
      241 garvqaqspn dgldfqdnqv vsklvepphg chgsvvafhs ptskpdaldm wllythptds
      301 rnrtnlgvyl nqtpldptaw septllatgt caysdlqnmg rgpdgspqfg clyesgnyde
      361 iiflmftlkq afptvhgaq
//
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