GenomeNet

Database: RefSeq
Entry: YP_001314703
LinkDB: YP_001314703
Original site: YP_001314703 
LOCUS       YP_001314703             249 aa            linear   BCT 25-JAN-2012
DEFINITION  carbonate dehydratase [Sinorhizobium medicae WSM419].
ACCESSION   YP_001314703
VERSION     YP_001314703.1  GI:150378108
DBLINK      Project: 58549
            BioProject: PRJNA58549
DBSOURCE    REFSEQ: accession NC_009621.1
KEYWORDS    .
SOURCE      Sinorhizobium medicae WSM419
  ORGANISM  Sinorhizobium medicae WSM419
            Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
            Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.
REFERENCE   1  (residues 1 to 249)
  AUTHORS   Reeve,W., Chain,P., O'Hara,G., Ardley,J., Nandesena,K., Brau,L.,
            Tiwari,R., Malfatti,S., Kiss,H., Lapidus,A., Copeland,A., Nolan,M.,
            Land,M., Hauser,L., Chang,Y.J., Ivanova,N., Mavromatis,K.,
            Markowitz,V., Kyrpides,N., Gollagher,M., Yates,R., Dilworth,M. and
            Howieson,J.
  TITLE     Complete genome sequence of the Medicago microsymbiont Ensifer
            (Sinorhizobium) medicae strain WSM419
  JOURNAL   Stand Genomic Sci 2 (1), 77-86 (2010)
   PUBMED   21304680
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 249)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (03-JUL-2007) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (residues 1 to 249)
  AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Glavina del Rio,T.,
            Dalin,E., Tice,H., Pitluck,S., Chain,P., Malfatti,S., Shin,M.,
            Vergez,L., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N.,
            Mikhailova,N., Reeve,W. and Richardson,P.
  CONSRTM   US DOE Joint Genome Institute
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUN-2007) US DOE Joint Genome Institute, 2800
            Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from ABR64770.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="Sinorhizobium medicae WSM419"
                     /strain="WSM419"
                     /db_xref="taxon:366394"
                     /plasmid="pSMED02"
     Protein         1..249
                     /product="carbonate dehydratase"
                     /EC_number="4.2.1.1"
                     /calculated_mol_wt=24074
     Region          1..249
                     /region_name="Cah"
                     /note="Carbonic anhydrase [Inorganic ion transport and
                     metabolism]; COG3338"
                     /db_xref="CDD:33147"
     sig_peptide     1..26
                     /product="hypothetical protein"
                     /note="Signal predicted by SignalP 3.0 HMM (Signal peptide
                     probability 1.000) with cleavage site probability 1.000 at
                     residue 26"
                     /calculated_mol_wt=2897
     Region          38..247
                     /region_name="alpha_CA_prokaryotic_like"
                     /note="Carbonic anhydrase alpha, prokaryotic-like
                     subfamily. Carbonic anhydrases (CAs) are zinc-containing
                     enzymes that catalyze the reversible hydration of carbon
                     dioxide in a two-step mechanism: a nucleophilic attack of
                     a zinc-bound hydroxide ion on carbon...; cd03124"
                     /db_xref="CDD:28766"
     Site            order(89,112,114,116,120,133,200)
                     /site_type="active"
                     /db_xref="CDD:28766"
     Site            order(114,116,133)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:28766"
     CDS             1..249
                     /locus_tag="Smed_6140"
                     /coded_by="NC_009621.1:1065775..1066524"
                     /note="PFAM: carbonic anhydrase;
                     KEGG: sme:SMa0045 probable carbonic anhydrase, Cah"
                     /transl_table=11
                     /db_xref="InterPro:IPR001148"
                     /db_xref="InterPro:IPR006311"
                     /db_xref="GeneID:5320442"
ORIGIN      
        1 merrdfikrl allaacplca etayaaeaeh wsyegeagpe hwgslsnens acsagsqqsp
       61 ldirgaikad ipglalnwks ggailnnght iqvkaapggt lrrgdkpyel vqyhfhapse
      121 hlveghrfpm evhfvhkhae tgalgvlgvf fvpgaanttf aslaatfpqk tgeqtalpnv
      181 dpsgllptsl rywayegslt tppcseivdw miaqdpievd aadidrftal ysmnarpalv
      241 anrryilas
//
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