LOCUS YP_001664368 230 aa linear BCT 02-JAN-2013
DEFINITION 50S ribosomal protein L1 [Thermoanaerobacter pseudethanolicus ATCC
33223].
ACCESSION YP_001664368
VERSION YP_001664368.1 GI:167036790
DBLINK Project: 58339
BioProject: PRJNA58339
DBSOURCE REFSEQ: accession NC_010321.1
KEYWORDS .
SOURCE Thermoanaerobacter pseudethanolicus ATCC 33223
ORGANISM Thermoanaerobacter pseudethanolicus ATCC 33223
Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales;
Thermoanaerobacteraceae; Thermoanaerobacter.
REFERENCE 1 (residues 1 to 230)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Glavina del Rio,T.,
Dalin,E., Tice,H., Pitluck,S., Bruce,D., Goodwin,L., Saunders,E.,
Brettin,T., Detter,J.C., Han,C., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Lykidis,A., Hemme,C., Fields,M.W., He,Z.,
Zhou,J. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Thermoanaerobacter psuedethanolicus 39E
JOURNAL Unpublished
REFERENCE 2 (residues 1 to 230)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (06-FEB-2008) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (residues 1 to 230)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Glavina del Rio,T.,
Dalin,E., Tice,H., Pitluck,S., Bruce,D., Goodwin,L., Saunders,E.,
Brettin,T., Detter,J.C., Han,C., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Lykidis,A., Hemme,C., Fields,M.W., He,Z.,
Zhou,J. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (17-JAN-2008) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT VALIDATED REFSEQ: This record has undergone validation or
preliminary review. The reference sequence was derived from
ABY94032.
Method: conceptual translation.
FEATURES Location/Qualifiers
source 1..230
/organism="Thermoanaerobacter pseudethanolicus ATCC 33223"
/strain="ATCC 33223; 39E"
/db_xref="ATCC:33223"
/db_xref="taxon:340099"
Protein 1..230
/product="50S ribosomal protein L1"
/calculated_mol_wt=24883
Region 24..224
/region_name="Ribosomal_L1"
/note="Ribosomal protein L1. The L1 protein, located near
the E-site of the ribosome, forms part of the L1 stalk
along with 23S rRNA. In bacteria and archaea, L1
functions both as a ribosomal protein that binds rRNA, and
as a translation repressor that binds...; cd00403"
/db_xref="CDD:88601"
Site order(35..37,40,42,44,46,168,170,172,218..219,221)
/site_type="other"
/note="mRNA/rRNA interface [nucleotide binding]"
/db_xref="CDD:88601"
CDS 1..230
/gene="rplA"
/locus_tag="Teth39_0363"
/coded_by="NC_010321.1:404682..405374"
/note="in Escherichia coli and Methanococcus, this protein
autoregulates expression; the binding site in the mRNA
mimics the binding site in the 23S rRNA"
/transl_table=11
/db_xref="InterPro:IPR002143"
/db_xref="InterPro:IPR005878"
/db_xref="GeneID:5874196"
ORIGIN
1 mkrgkkyles lklydktqqy ssdeaidivl ktakanfdet idlavrlgvd prhadqqvrg
61 tvvlphgtgk svkvlvfakg ekakeaeaag adyvgaeelv akiqnenwfd ydvvvatpdm
121 mgavgrlgki lgpkglmpnp ksgtvtfdle kaikeikagk ieyrvdkagi ihvpigkksf
181 gkekllenfr avmdaiiksk paaakgqyik slvlsstmgp gvkvnplkif
//