GenomeNet

Database: RefSeq
Entry: YP_001664368
LinkDB: YP_001664368
Original site: YP_001664368 
LOCUS       YP_001664368             230 aa            linear   BCT 02-JAN-2013
DEFINITION  50S ribosomal protein L1 [Thermoanaerobacter pseudethanolicus ATCC
            33223].
ACCESSION   YP_001664368
VERSION     YP_001664368.1  GI:167036790
DBLINK      Project: 58339
            BioProject: PRJNA58339
DBSOURCE    REFSEQ: accession NC_010321.1
KEYWORDS    .
SOURCE      Thermoanaerobacter pseudethanolicus ATCC 33223
  ORGANISM  Thermoanaerobacter pseudethanolicus ATCC 33223
            Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales;
            Thermoanaerobacteraceae; Thermoanaerobacter.
REFERENCE   1  (residues 1 to 230)
  AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Glavina del Rio,T.,
            Dalin,E., Tice,H., Pitluck,S., Bruce,D., Goodwin,L., Saunders,E.,
            Brettin,T., Detter,J.C., Han,C., Schmutz,J., Larimer,F., Land,M.,
            Hauser,L., Kyrpides,N., Lykidis,A., Hemme,C., Fields,M.W., He,Z.,
            Zhou,J. and Richardson,P.
  CONSRTM   US DOE Joint Genome Institute
  TITLE     Complete sequence of Thermoanaerobacter psuedethanolicus 39E
  JOURNAL   Unpublished
REFERENCE   2  (residues 1 to 230)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-FEB-2008) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (residues 1 to 230)
  AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Glavina del Rio,T.,
            Dalin,E., Tice,H., Pitluck,S., Bruce,D., Goodwin,L., Saunders,E.,
            Brettin,T., Detter,J.C., Han,C., Schmutz,J., Larimer,F., Land,M.,
            Hauser,L., Kyrpides,N., Lykidis,A., Hemme,C., Fields,M.W., He,Z.,
            Zhou,J. and Richardson,P.
  CONSRTM   US DOE Joint Genome Institute
  TITLE     Direct Submission
  JOURNAL   Submitted (17-JAN-2008) US DOE Joint Genome Institute, 2800
            Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            ABY94032.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..230
                     /organism="Thermoanaerobacter pseudethanolicus ATCC 33223"
                     /strain="ATCC 33223; 39E"
                     /db_xref="ATCC:33223"
                     /db_xref="taxon:340099"
     Protein         1..230
                     /product="50S ribosomal protein L1"
                     /calculated_mol_wt=24883
     Region          24..224
                     /region_name="Ribosomal_L1"
                     /note="Ribosomal protein L1.  The L1 protein, located near
                     the E-site of the ribosome, forms part of the L1 stalk
                     along with 23S rRNA.  In bacteria and archaea, L1
                     functions both as a ribosomal protein that binds rRNA, and
                     as a translation repressor that binds...; cd00403"
                     /db_xref="CDD:88601"
     Site            order(35..37,40,42,44,46,168,170,172,218..219,221)
                     /site_type="other"
                     /note="mRNA/rRNA interface [nucleotide binding]"
                     /db_xref="CDD:88601"
     CDS             1..230
                     /gene="rplA"
                     /locus_tag="Teth39_0363"
                     /coded_by="NC_010321.1:404682..405374"
                     /note="in Escherichia coli and Methanococcus, this protein
                     autoregulates expression; the binding site in the mRNA
                     mimics the binding site in the 23S rRNA"
                     /transl_table=11
                     /db_xref="InterPro:IPR002143"
                     /db_xref="InterPro:IPR005878"
                     /db_xref="GeneID:5874196"
ORIGIN      
        1 mkrgkkyles lklydktqqy ssdeaidivl ktakanfdet idlavrlgvd prhadqqvrg
       61 tvvlphgtgk svkvlvfakg ekakeaeaag adyvgaeelv akiqnenwfd ydvvvatpdm
      121 mgavgrlgki lgpkglmpnp ksgtvtfdle kaikeikagk ieyrvdkagi ihvpigkksf
      181 gkekllenfr avmdaiiksk paaakgqyik slvlsstmgp gvkvnplkif
//
DBGET integrated database retrieval system