GenomeNet

Database: RefSeq
Entry: YP_002347663
LinkDB: YP_002347663
Original site: YP_002347663 
LOCUS       YP_002347663             599 aa            linear   CON 01-AUG-2016
DEFINITION  GTP-binding protein LepA [Yersinia pestis CO92].
ACCESSION   YP_002347663
VERSION     YP_002347663.1
DBLINK      BioProject: PRJNA57621
            Assembly: GCF_000009065.1
DBSOURCE    REFSEQ: accession NC_003143.1
KEYWORDS    RefSeq.
SOURCE      Yersinia pestis CO92
  ORGANISM  Yersinia pestis CO92
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Yersiniaceae; Yersinia.
REFERENCE   1  (residues 1 to 599)
  AUTHORS   Rosso,M.L., Chauvaux,S., Dessein,R., Laurans,C., Frangeul,L.,
            Lacroix,C., Schiavo,A., Dillies,M.A., Foulon,J., Coppee,J.Y.,
            Medigue,C., Carniel,E., Simonet,M. and Marceau,M.
  TITLE     Growth of Yersinia pseudotuberculosis in human plasma: impacts on
            virulence and metabolic gene expression
  JOURNAL   BMC Microbiol. 8, 211 (2008)
   PUBMED   19055764
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 599)
  AUTHORS   Delihas,N.
  TITLE     Annotation and evolutionary relationships of a small regulatory RNA
            gene micF and its target ompF in Yersinia species
  JOURNAL   BMC Microbiol. 3, 13 (2003)
   PUBMED   12834539
  REMARK    Publication Status: Online-Only
REFERENCE   3  (residues 1 to 599)
  AUTHORS   Parkhill,J., Wren,B.W., Thomson,N.R., Titball,R.W., Holden,M.T.,
            Prentice,M.B., Sebaihia,M., James,K.D., Churcher,C., Mungall,K.L.,
            Baker,S., Basham,D., Bentley,S.D., Brooks,K., Cerdeno-Tarraga,A.M.,
            Chillingworth,T., Cronin,A., Davies,R.M., Davis,P., Dougan,G.,
            Feltwell,T., Hamlin,N., Holroyd,S., Jagels,K., Karlyshev,A.V.,
            Leather,S., Moule,S., Oyston,P.C., Quail,M., Rutherford,K.,
            Simmonds,M., Skelton,J., Stevens,K., Whitehead,S. and Barrell,B.G.
  TITLE     Genome sequence of Yersinia pestis, the causative agent of plague
  JOURNAL   Nature 413 (6855), 523-527 (2001)
   PUBMED   11586360
REFERENCE   4  (residues 1 to 599)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-DEC-2008) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
  REMARK    Direct Submission
REFERENCE   5  (residues 1 to 599)
  AUTHORS   Parkhill,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-OCT-2001) Submitted on behalf of the Yersinia
            sequencing team, Sanger Centre, Wellcome Trust Genome Campus,
            Hinxton, Cambridge CB10 1SA E-mail: parkhill@sanger.ac.uk
  REMARK    Direct Submission
COMMENT     REVIEWED REFSEQ: This record has been curated by NCBI staff. The
            reference sequence is identical to CAL21335.
            RefSeq Category: Reference Genome
                        CLI: Clinical Isolate
                        MOD: Model Organism
                        PRT: Proteomics
                        UPR: UniProt Genome
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..599
                     /organism="Yersinia pestis CO92"
                     /strain="CO92"
                     /db_xref="taxon:214092"
                     /biovar="Orientalis"
     Protein         1..599
                     /product="GTP-binding protein LepA"
                     /calculated_mol_wt=66579
     Region          1..597
                     /region_name="PRK05433"
                     /note="GTP-binding protein LepA; Provisional"
                     /db_xref="CDD:235462"
     CDS             1..599
                     /gene="lepA"
                     /locus_tag="YPO2716"
                     /coded_by="NC_003143.1:3043412..3045211"
                     /inference="protein motif:TMHMM:2.0"
                     /note="binds to the ribosome on the universally-conserved
                     alpha-sarcin loop"
                     /transl_table=11
                     /db_xref="InterPro:IPR000178"
                     /db_xref="InterPro:IPR000640"
                     /db_xref="InterPro:IPR000795"
                     /db_xref="InterPro:IPR001806"
                     /db_xref="InterPro:IPR004161"
                     /db_xref="InterPro:IPR005225"
                     /db_xref="InterPro:IPR006297"
                     /db_xref="InterPro:IPR009022"
                     /db_xref="InterPro:IPR013842"
                     /db_xref="UniProtKB/TrEMBL:Q0WDH5"
                     /db_xref="GeneID:1175546"
CONTIG      join(WP_002209677.1:1..599)
ORIGIN      
        1 mkhirnfsii ahidhgkstl sdriiqicgg lseremaaqv ldsmdlerer gitikaqsvt
       61 ldyhskdgqt yqlnfidtpg hvdfsyevsr slaacegall vvdagqgvea qtlancytam
      121 emdlevvpvl nkidlpaadp ervaeeiedi vgidatdair csaktgvgvp dvlerlvrdi
      181 papegdpngp lqaliidswf dnylgvvsli rikngslrkg dkvkvmstgq synadrlgif
      241 tpkrvdrdvl ncgevgwlvc aikdilgapv gdtltltrnp aekslpgfkk vkpqvyaglf
      301 pissddyesf rdalgklsln daslfyepes stalgfgfrc gflgllhmei iqerlereyd
      361 lelittaptv vyevittnqe tvyvdspskl palnnieelr epiaechmll pqeylgnvit
      421 lciekrgtqt nmvyhgkqva ltyeipmaev vldffdrlks tsrgyasldy nfkrfqtsdm
      481 vrvdvlinne rvdalalith rdnaqyrgrd lvekmkelip rqqfdiaiqa aignhiiars
      541 tvkqlrknvl akcyggdvsr kkkllqkqkd gkkrmkqvgn velpqeafla ilhvgkdsk
//
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