LOCUS YP_002799196 301 aa linear BCT 27-SEP-2012
DEFINITION RNA pseudouridine synthase family protein [Azotobacter vinelandii
DJ].
ACCESSION YP_002799196
VERSION YP_002799196.1 GI:226944123
DBLINK Project: 57597
BioProject: PRJNA57597
DBSOURCE REFSEQ: accession NC_012560.1
KEYWORDS .
SOURCE Azotobacter vinelandii DJ
ORGANISM Azotobacter vinelandii DJ
Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
Pseudomonadaceae; Azotobacter.
REFERENCE 1 (residues 1 to 301)
AUTHORS Setubal,J.C., dos Santos,P., Goldman,B.S., Ertesvag,H., Espin,G.,
Rubio,L.M., Valla,S., Almeida,N.F., Balasubramanian,D., Cromes,L.,
Curatti,L., Du,Z., Godsy,E., Goodner,B., Hellner-Burris,K.,
Hernandez,J.A., Houmiel,K., Imperial,J., Kennedy,C., Larson,T.J.,
Latreille,P., Ligon,L.S., Lu,J., Maerk,M., Miller,N.M., Norton,S.,
O'Carroll,I.P., Paulsen,I., Raulfs,E.C., Roemer,R., Rosser,J.,
Segura,D., Slater,S., Stricklin,S.L., Studholme,D.J., Sun,J.,
Viana,C.J., Wallin,E., Wang,B., Wheeler,C., Zhu,H., Dean,D.R.,
Dixon,R. and Wood,D.
TITLE Genome sequence of Azotobacter vinelandii, an obligate aerobe
specialized to support diverse anaerobic metabolic processes
JOURNAL J. Bacteriol. 191 (14), 4534-4545 (2009)
PUBMED 19429624
REFERENCE 2 (residues 1 to 301)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (14-APR-2009) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (residues 1 to 301)
AUTHORS Setubal,J.C., Almeida,N.F., Goldman,B., Dean,D.R., Dixon,R., Dos
Santos,P., Ertesvag,H., Espin,G.E., Goodner,B.W., Imperial,J.,
Kennedy,C., Larson,T., Paulsen,I., Rosser,J., Rubio,L.M.,
Segura,D., Slater,S., Valla,S., Mesquita,L.P., Viana,C.J. and
Wood,D.
CONSRTM Azotobacter vinelandii Consortium
TITLE Direct Submission
JOURNAL Submitted (15-SEP-2008) Virginia Bioinformatics Institute, Virginia
Polytechnic Institute and State University, Washington Street, MC
0477, Blacksburg, VA 24061-0477, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence is identical to ACO78221.
Method: conceptual translation.
FEATURES Location/Qualifiers
source 1..301
/organism="Azotobacter vinelandii DJ"
/strain="DJ; ATCC BAA-1303"
/culture_collection="ATCC:BAA-1303"
/db_xref="taxon:322710"
/note="strain coidentity: DJ = ATCC BAA-1303"
Protein 1..301
/product="RNA pseudouridine synthase family protein"
/calculated_mol_wt=34300
Region 25..293
/region_name="RluA"
/note="Pseudouridylate synthases, 23S RNA-specific
[Translation, ribosomal structure and biogenesis];
COG0564"
/db_xref="CDD:30910"
Region 47..295
/region_name="PSRA_1"
/note="Pseudouridine synthase, a subgroup of the RluA
family; cd02558"
/db_xref="CDD:211332"
Site order(133..136,235)
/site_type="active"
/note="probable active site [active]"
/db_xref="CDD:211332"
CDS 1..301
/locus_tag="Avin_20160"
/coded_by="NC_012560.1:2006139..2007044"
/transl_table=11
/db_xref="GeneID:7760944"
ORIGIN
1 msdasaaslr psvlhlprgd wrtvldclca hfpaigreiw lermrrgrvl dgegnvlgpe
61 ypyrealrvh yfrevaaetp ipfaeavlha ddhlvvadkp hflpvapvge yveqtllarl
121 vrrlgnpdlv plhridrlta glvlfscnpa srgryqalfr errirkvyaa iapalpglsf
181 pllrrsrlvk gepfflmrea egepnsetrv epgerrgelw ryvlhpvtgk thqlrvhmat
241 lgagicndpl yprllersrr eiddyrrplq llaqtlnfvd plsgrerrfd srlaldfdac
301 r
//