GenomeNet

Database: RefSeq
Entry: YP_002799196
LinkDB: YP_002799196
Original site: YP_002799196 
LOCUS       YP_002799196             301 aa            linear   BCT 27-SEP-2012
DEFINITION  RNA pseudouridine synthase family protein [Azotobacter vinelandii
            DJ].
ACCESSION   YP_002799196
VERSION     YP_002799196.1  GI:226944123
DBLINK      Project: 57597
            BioProject: PRJNA57597
DBSOURCE    REFSEQ: accession NC_012560.1
KEYWORDS    .
SOURCE      Azotobacter vinelandii DJ
  ORGANISM  Azotobacter vinelandii DJ
            Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
            Pseudomonadaceae; Azotobacter.
REFERENCE   1  (residues 1 to 301)
  AUTHORS   Setubal,J.C., dos Santos,P., Goldman,B.S., Ertesvag,H., Espin,G.,
            Rubio,L.M., Valla,S., Almeida,N.F., Balasubramanian,D., Cromes,L.,
            Curatti,L., Du,Z., Godsy,E., Goodner,B., Hellner-Burris,K.,
            Hernandez,J.A., Houmiel,K., Imperial,J., Kennedy,C., Larson,T.J.,
            Latreille,P., Ligon,L.S., Lu,J., Maerk,M., Miller,N.M., Norton,S.,
            O'Carroll,I.P., Paulsen,I., Raulfs,E.C., Roemer,R., Rosser,J.,
            Segura,D., Slater,S., Stricklin,S.L., Studholme,D.J., Sun,J.,
            Viana,C.J., Wallin,E., Wang,B., Wheeler,C., Zhu,H., Dean,D.R.,
            Dixon,R. and Wood,D.
  TITLE     Genome sequence of Azotobacter vinelandii, an obligate aerobe
            specialized to support diverse anaerobic metabolic processes
  JOURNAL   J. Bacteriol. 191 (14), 4534-4545 (2009)
   PUBMED   19429624
REFERENCE   2  (residues 1 to 301)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (14-APR-2009) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (residues 1 to 301)
  AUTHORS   Setubal,J.C., Almeida,N.F., Goldman,B., Dean,D.R., Dixon,R., Dos
            Santos,P., Ertesvag,H., Espin,G.E., Goodner,B.W., Imperial,J.,
            Kennedy,C., Larson,T., Paulsen,I., Rosser,J., Rubio,L.M.,
            Segura,D., Slater,S., Valla,S., Mesquita,L.P., Viana,C.J. and
            Wood,D.
  CONSRTM   Azotobacter vinelandii Consortium
  TITLE     Direct Submission
  JOURNAL   Submitted (15-SEP-2008) Virginia Bioinformatics Institute, Virginia
            Polytechnic Institute and State University, Washington Street, MC
            0477, Blacksburg, VA 24061-0477, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence is identical to ACO78221.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Azotobacter vinelandii DJ"
                     /strain="DJ; ATCC BAA-1303"
                     /culture_collection="ATCC:BAA-1303"
                     /db_xref="taxon:322710"
                     /note="strain coidentity: DJ = ATCC BAA-1303"
     Protein         1..301
                     /product="RNA pseudouridine synthase family protein"
                     /calculated_mol_wt=34300
     Region          25..293
                     /region_name="RluA"
                     /note="Pseudouridylate synthases, 23S RNA-specific
                     [Translation, ribosomal structure and biogenesis];
                     COG0564"
                     /db_xref="CDD:30910"
     Region          47..295
                     /region_name="PSRA_1"
                     /note="Pseudouridine synthase, a subgroup of the RluA
                     family; cd02558"
                     /db_xref="CDD:211332"
     Site            order(133..136,235)
                     /site_type="active"
                     /note="probable active site [active]"
                     /db_xref="CDD:211332"
     CDS             1..301
                     /locus_tag="Avin_20160"
                     /coded_by="NC_012560.1:2006139..2007044"
                     /transl_table=11
                     /db_xref="GeneID:7760944"
ORIGIN      
        1 msdasaaslr psvlhlprgd wrtvldclca hfpaigreiw lermrrgrvl dgegnvlgpe
       61 ypyrealrvh yfrevaaetp ipfaeavlha ddhlvvadkp hflpvapvge yveqtllarl
      121 vrrlgnpdlv plhridrlta glvlfscnpa srgryqalfr errirkvyaa iapalpglsf
      181 pllrrsrlvk gepfflmrea egepnsetrv epgerrgelw ryvlhpvtgk thqlrvhmat
      241 lgagicndpl yprllersrr eiddyrrplq llaqtlnfvd plsgrerrfd srlaldfdac
      301 r
//
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