LOCUS YP_002887240 676 aa linear BCT 14-FEB-2012
DEFINITION ATP-dependent DNA helicase RecG [Exiguobacterium sp. AT1b].
ACCESSION YP_002887240
VERSION YP_002887240.1 GI:229918594
DBLINK Project: 59093
BioProject: PRJNA59093
DBSOURCE REFSEQ: accession NC_012673.1
KEYWORDS .
SOURCE Exiguobacterium sp. AT1b
ORGANISM Exiguobacterium sp. AT1b
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XII.
Incertae Sedis; Exiguobacterium.
REFERENCE 1 (residues 1 to 676)
AUTHORS Vishnivetskaya,T.A., Lucas,S., Copeland,A., Lapidus,A., Glavina del
Rio,T., Dalin,E., Tice,H., Bruce,D.C., Goodwin,L.A., Pitluck,S.,
Saunders,E., Brettin,T., Detter,C., Han,C., Larimer,F., Land,M.L.,
Hauser,L.J., Kyrpides,N.C., Ovchinnikova,G., Kathariou,S.,
Ramaley,R.F., Rodrigues,D.F., Hendrix,C., Richardson,P. and
Tiedje,J.M.
TITLE Complete genome sequence of the Thermophilic Bacterium
Exiguobacterium sp. AT1b
JOURNAL J. Bacteriol. 193 (11), 2880-2881 (2011)
PUBMED 21460088
REFERENCE 2 (residues 1 to 676)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (11-MAY-2009) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (residues 1 to 676)
AUTHORS Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E.,
Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Saunders,E., Brettin,T.,
Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L., Kyrpides,N.,
Ovchinnikova,G., Ramaley,R.F., Rodrigues,D.F., Vishnivetskaya,T.A.,
Kathariou,S., Tiedje,J.M. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2009) US DOE Joint Genome Institute, 2800
Mitchell Drive B310, Walnut Creek, CA 94598-1698, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from ACQ71795.
Method: conceptual translation.
FEATURES Location/Qualifiers
source 1..676
/organism="Exiguobacterium sp. AT1b"
/strain="AT1b"
/db_xref="taxon:360911"
Protein 1..676
/product="ATP-dependent DNA helicase RecG"
/calculated_mol_wt=75715
Region 1..676
/region_name="PRK10917"
/note="ATP-dependent DNA helicase RecG; Provisional"
/db_xref="CDD:182836"
Region 61..131
/region_name="RecG_wedge_OBF"
/note="RecG_wedge_OBF: A subfamily of OB folds
corresponding to the OB fold found in the N-terminal
(wedge) domain of Escherichia coli RecG. RecG is a
branched-DNA-specific helicase, which catalyzes the
interconversion of a DNA replication fork to a...;
cd04488"
/db_xref="CDD:72960"
Site order(69,78,96,100,124)
/site_type="other"
/note="ssDNA binding site"
/db_xref="CDD:72960"
Site order(110,112,114,131)
/site_type="other"
/note="generic binding surface II"
/db_xref="CDD:72960"
Region 273..409
/region_name="DEXDc"
/note="DEAD-like helicases superfamily. A diverse family
of proteins involved in ATP-dependent RNA or DNA
unwinding. This domain contains the ATP-binding region;
cd00046"
/db_xref="CDD:28927"
Site 282..286
/site_type="other"
/note="ATP binding site [chemical binding]"
/db_xref="CDD:28927"
Site 380..383
/site_type="other"
/note="putative Mg++ binding site [ion binding]"
/db_xref="CDD:28927"
Region 436..575
/region_name="HELICc"
/note="Helicase superfamily c-terminal domain; associated
with DEXDc-, DEAD-, and DEAH-box proteins, yeast
initiation factor 4A, Ski2p, and Hepatitis C virus NS3
helicases; this domain is found in a wide variety of
helicases and helicase related proteins; may...; cd00079"
/db_xref="CDD:28960"
Site order(469..470,479..480,502..503,528..530)
/site_type="other"
/note="nucleotide binding region [chemical binding]"
/db_xref="CDD:28960"
Site order(536,558,562,565)
/site_type="other"
/note="ATP-binding site [chemical binding]"
/db_xref="CDD:28960"
CDS 1..676
/locus_tag="EAT1b_2881"
/coded_by="NC_012673.1:2846515..2848545"
/inference="protein motif:TFAM:TIGR00643"
/note="KEGG: bsu:BSU15870 ATP-dependent DNA helicase;
TIGRFAM: ATP-dependent DNA helicase RecG;
PFAM: DEAD/DEAH box helicase domain protein; helicase
domain protein; nucleic acid binding OB-fold
tRNA/helicase-type;
SMART: DEAD-like helicase ; helicase domain protein"
/transl_table=11
/db_xref="InterPro:IPR001650"
/db_xref="InterPro:IPR002016"
/db_xref="InterPro:IPR004365"
/db_xref="InterPro:IPR004609"
/db_xref="InterPro:IPR010916"
/db_xref="InterPro:IPR011545"
/db_xref="InterPro:IPR014001"
/db_xref="InterPro:IPR014021"
/db_xref="GeneID:7870136"
ORIGIN
1 mqnndrlttl kgvgpemakk levmglvrie dvlehvpfry enynsgtvtt avhgdlvkws
61 gtvqaeplvr yyskgknrlq frllledrya vqvtmfnraf ykeklviget vtvkgkwdmn
121 rmtisatdle fgapsgglqp iyslragltq knfsrivkla feqvndlpeq vpqairdryr
181 lvdrmtmlrg mhfpdtvety kqarrsyvye eclmyqlklq afrkmersgn gralhldkhq
241 lnefvkrlaf pltgaqtrvi reivsdlerp ermnrllqgd vgsgktvvaa ialyatvtag
301 yqgalmvpte ilaeqhatsl qelfepfgit ialltssvkg karealltai rsgdvdiivg
361 thaliqgpve fsnlhlaitd eqhrfgveqr kklrdkaefa dvlymtatpi prtlaisafg
421 emdvstidem pkgrkpiety wakhdqidrv htmvdrelal grqayviapl ieesdtleve
481 satalyellk erfsnygvgl mhgklsstek devmksfadn atqilvsttv vevgvnvpna
541 sliiihdaer fglaqlhqlr grvgrgahqs fcilvgdpks dvgkvrlktm tetndgfvla
601 ekdlelrgag dffgtaqsgl psfrvadpvl dlkvmevamq davkllgsda fwhdaqyegl
661 rgylkqldll vgerle
//
