LOCUS       YP_003629254             620 aa            linear   BCT 14-FEB-2012
DEFINITION  restriction modification system DNA specificity domain-containing
            protein [Planctomyces limnophilus DSM 3776].
ACCESSION   YP_003629254
VERSION     YP_003629254.1  GI:296121476
DBLINK      Project: 48643
            BioProject: PRJNA48643
DBSOURCE    REFSEQ: accession NC_014148.1
KEYWORDS    .
SOURCE      Planctomyces limnophilus DSM 3776
  ORGANISM  Planctomyces limnophilus DSM 3776
            Bacteria; Planctomycetes; Planctomycetia; Planctomycetales;
            Planctomycetaceae; Planctomyces.
REFERENCE   1  (residues 1 to 620)
  AUTHORS   Labutti,K., Sikorski,J., Schneider,S., Nolan,M., Lucas,S., Glavina
            Del Rio,T., Tice,H., Cheng,J.F., Goodwin,L., Pitluck,S.,
            Liolios,K., Ivanova,N., Mavromatis,K., Mikhailova,N., Pati,A.,
            Chen,A., Palaniappan,K., Land,M., Hauser,L., Chang,Y.J.,
            Jeffries,C.D., Tindall,B.J., Rohde,M., Goker,M., Woyke,T.,
            Bristow,J., Eisen,J.A., Markowitz,V., Hugenholtz,P., Kyrpides,N.C.,
            Klenk,H.P. and Lapidus,A.
  TITLE     Complete genome sequence of Planctomyces limnophilus type strain
            (Mu 290)
  JOURNAL   Stand Genomic Sci 3 (1), 47-56 (2010)
   PUBMED   21304691
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 620)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (14-MAY-2010) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (residues 1 to 620)
  AUTHORS   Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Dalin,E.,
            Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Kyrpides,N.,
            Mavromatis,K., Mikhailova,N., Ovchinnikova,G., LaButti,K., Clum,A.,
            Brettin,T., Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L.,
            Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D.,
            Tindal,B., Klenk,H.-P. and Eisen,J.A.
  CONSRTM   US DOE Joint Genome Institute (JGI-PGF)
  TITLE     Direct Submission
  JOURNAL   Submitted (09-SEP-2009) US DOE Joint Genome Institute, 2800
            Mitchell Drive, Walnut Creek, CA 94598-1698, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence is identical to ADG67055.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..620
                     /organism="Planctomyces limnophilus DSM 3776"
                     /strain="DSM 3776"
                     /isolation_source="surface water"
                     /db_xref="taxon:521674"
     Protein         1..620
                     /product="restriction modification system DNA specificity
                     domain-containing protein"
                     /calculated_mol_wt=69686
     Region          5..166
                     /region_name="Methylase_S"
                     /note="Type I restriction modification DNA specificity
                     domain; pfam01420"
                     /db_xref="CDD:201785"
     Region          8..391
                     /region_name="HsdS"
                     /note="Restriction endonuclease S subunits [Defense
                     mechanisms]; COG0732"
                     /db_xref="CDD:31076"
     Region          198..347
                     /region_name="Methylase_S"
                     /note="Type I restriction modification DNA specificity
                     domain; pfam01420"
                     /db_xref="CDD:201785"
     CDS             1..620
                     /locus_tag="Plim_1220"
                     /coded_by="complement(NC_014148.1:1559863..1561725)"
                     /inference="protein motif:PFAM:PF01420"
                     /note="PFAM: restriction modification system DNA
                     specificity domain;
                     KEGG: dar:Daro_1307 restriction modification system DNA
                     specificity subunit"
                     /transl_table=11
                     /db_xref="InterPro:IPR000055"
                     /db_xref="GeneID:9137913"
ORIGIN      
        1 mnmppngwtt dalsnlvtfk tgklnsnaav sngaypfftc sqetlrtntf afdtecvlla
       61 gnnangiypl kyfhgrfday qrtyvvtpqd ctrlntrfly ysmwpllehl qsistgaatk
      121 fltltilngl qltfpsepvq rkiagilsay ddlienntrr iaileemaqa iyrewfvhfr
      181 fpghentllv dsplgkipeg wqvkrldsic eritsggtpr tnvneywdgd ipwlssgetg
      241 ntfitetekk itqegvtnss trfarsgctv iasagqgktr gqtsmlcldc yinqstiavt
      301 adgkqttdsf lffdlvqryd qfrqisdgss rgslttklia dleiilpqpf liqkfdvltt
      361 pvvkhienil rknkilrktr dlllpklisg eldvesleid fdeptfqqpe vekviqppkp
      421 qivssptaet gtpykddaai lclllqellh lapdrpnnef viqkhmfglk hlrrhainsk
      481 fvaqkagpws qelrhkavfa aagfdwlrfd nqgkillpgr kftkgveyak sllgekaalv
      541 tefvqdlskf gksglgkwmt ifkvvcdlhd agqpitrqni qtgidnwpgk rdknnfsven
      601 vddtiskmvr qkwftlqags
//