GenomeNet

Database: RefSeq
Entry: YP_003713711
LinkDB: YP_003713711
Original site: YP_003713711 
LOCUS       YP_003713711             695 aa            linear   BCT 09-JAN-2013
DEFINITION  VrgG protein [Xenorhabdus nematophila ATCC 19061].
ACCESSION   YP_003713711
VERSION     YP_003713711.1  GI:300724393
DBLINK      Project: 49133
            BioProject: PRJNA49133
DBSOURCE    REFSEQ: accession NC_014228.1
KEYWORDS    .
SOURCE      Xenorhabdus nematophila ATCC 19061
  ORGANISM  Xenorhabdus nematophila ATCC 19061
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
            Enterobacteriaceae; Xenorhabdus.
REFERENCE   1  (residues 1 to 695)
  AUTHORS   Chaston,J.M., Suen,G., Tucker,S.L., Andersen,A.W., Bhasin,A.,
            Bode,E., Bode,H.B., Brachmann,A.O., Cowles,C.E., Cowles,K.N.,
            Darby,C., de Leon,L., Drace,K., Du,Z., Givaudan,A., Herbert
            Tran,E.E., Jewell,K.A., Knack,J.J., Krasomil-Osterfeld,K.C.,
            Kukor,R., Lanois,A., Latreille,P., Leimgruber,N.K., Lipke,C.M.,
            Liu,R., Lu,X., Martens,E.C., Marri,P.R., Medigue,C., Menard,M.L.,
            Miller,N.M., Morales-Soto,N., Norton,S., Ogier,J.C., Orchard,S.S.,
            Park,D., Park,Y., Qurollo,B.A., Sugar,D.R., Richards,G.R., Rouy,Z.,
            Slominski,B., Slominski,K., Snyder,H., Tjaden,B.C., van der
            Hoeven,R., Welch,R.D., Wheeler,C., Xiang,B., Barbazuk,B.,
            Gaudriault,S., Goodner,B., Slater,S.C., Forst,S., Goldman,B.S. and
            Goodrich-Blair,H.
  TITLE     The entomopathogenic bacterial endosymbionts Xenorhabdus and
            Photorhabdus: convergent lifestyles from divergent genomes
  JOURNAL   PLoS ONE 6 (11), E27909 (2011)
   PUBMED   22125637
  REMARK    Publication Status: Online-Only
REFERENCE   2  (residues 1 to 695)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-JUN-2010) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
  REMARK    Direct Submission
REFERENCE   3  (residues 1 to 695)
  AUTHORS   Gaudriault,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-FEB-2010) Gaudriault S., Laboratoire EMIP, UMR 1133,
            INRA, Universite Montpellier2, CC 54, Universite Montpellier 2,
            Place Eugene Bataillon, 34095 Montpellier CEDEX 05, FRANCE
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence is identical to CBJ91605.
            Annotation results relative to BLAST similarities, COG
            assignations, enzymatic function prediction (PRIAM software), TMHMM
            and SignalP predictions, and synteny conservation (Syntonizer
            software) are available in the MaGe annotation system
            http://www.genoscope.cns.fr/agc/mage.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..695
                     /organism="Xenorhabdus nematophila ATCC 19061"
                     /strain="ATCC 19061"
                     /db_xref="taxon:406817"
     Protein         1..695
                     /product="VrgG protein"
                     /calculated_mol_wt=75671
     Region          95..605
                     /region_name="VI_Rhs_Vgr"
                     /note="type VI secretion system Vgr family protein;
                     TIGR03361"
                     /db_xref="CDD:200267"
     Region          115..415
                     /region_name="Phage_GPD"
                     /note="Phage late control gene D protein (GPD); pfam05954"
                     /db_xref="CDD:203357"
     Region          453..544
                     /region_name="Phage_base_V"
                     /note="Phage-related baseplate assembly protein;
                     pfam04717"
                     /db_xref="CDD:203075"
     CDS             1..695
                     /locus_tag="XNC1_3571"
                     /operon="XNC1_operon0678"
                     /coded_by="complement(NC_014228.1:3452111..3454198)"
                     /inference="ab initio prediction:AMIGene:2.0"
                     /note="Evidence 3 : Function proposed based on presence of
                     conserved amino acid motif, structural feature or limited
                     homology"
                     /transl_table=11
                     /db_xref="UniProtKB/TrEMBL:D3VA41"
                     /db_xref="GeneID:9431588"
ORIGIN      
        1 msikkhltkl qqgqsllekg kqatglakqa aglpggagta gltdksglmk pggfagplsg
       61 gqslvqqata ghsgaaralq qagvggdsap gglrftltag slppqtfvvt dftlnegfsr
      121 lftlnvglas adpaidfpsv ldrsatltit qdgkeqrsls gcvarfeqgn tglhqttyqm
      181 ticpdlwrts lrqnsrifqq qdivtilttl lkehgirdvv fslrqphpar efcvqyqesd
      241 fdflqrltae egifyffecg ngrntlvfad dagsvppgim lpyqpgdist tgepsvtsft
      301 ssaqvrparv elkdytfknp awpaefreqm kdeqlqeqyy ehydypgrfk deahgkaftr
      361 yrlealrnda itgqghghai aiqpgklfil tnhprddlnq pwqvvsasht gnqpgaleta
      421 tgdsgttlhs qfsfirhnqh wrptplpkpg idgpqiakvv gpageeifcd qygrirlqfp
      481 wdrygksddq sscwirvtqp wagqgwgmla iprigqevvv dflhgdpdqp ivtgrtyhas
      541 nippgglpgs ktqmafrskt hkgegynell fedakgsekl slhaqkdmdt tvlndrstrv
      601 mhdhtesvgh nqaisvradr hkevvgmevs sigtrqvtve ktsvlsvkgq itiqstesgi
      661 tigntkgsis idtdgnihit gntviingke vitln
//
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