GenomeNet

Database: RefSeq
Entry: YP_004257757
LinkDB: YP_004257757
Original site: YP_004257757 
LOCUS       YP_004257757             507 aa            linear   CON 06-JUL-2013
DEFINITION  xylan 1,4-beta-xylosidase [Bacteroides salanitronis DSM 18170].
ACCESSION   YP_004257757
VERSION     YP_004257757.1  GI:325297840
DBLINK      Project: 63269
            BioProject: PRJNA63269
DBSOURCE    REFSEQ: accession NC_015164.1
KEYWORDS    RefSeq.
SOURCE      Bacteroides salanitronis DSM 18170
  ORGANISM  Bacteroides salanitronis DSM 18170
            Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales;
            Bacteroidaceae; Bacteroides.
REFERENCE   1  (residues 1 to 507)
  AUTHORS   Lucas,S., Copeland,A., Lapidus,A., Goodwin,L., Pitluck,S.,
            Kyrpides,N., Mavromatis,K., Ivanova,N., Mikhailova,N., Teshima,H.,
            Misra,M., Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L.,
            Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D.,
            Gronow,S., Wellnitz,S., Brambilla,E., Klenk,H.-P. and Eisen,J.A.
  CONSRTM   US DOE Joint Genome Institute (JGI-PGF)
  TITLE     The complete sequence of chromosome of Bacteroides salanitronis DSM
            18170
  JOURNAL   Unpublished
REFERENCE   2  (residues 1 to 507)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (28-FEB-2011) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (residues 1 to 507)
  AUTHORS   Lucas,S., Copeland,A., Lapidus,A., Goodwin,L., Pitluck,S.,
            Kyrpides,N., Mavromatis,K., Ivanova,N., Mikhailova,N., Teshima,H.,
            Misra,M., Detter,J.C., Han,C., Larimer,F., Land,M., Hauser,L.,
            Markowitz,V., Cheng,J.-F., Hugenholtz,P., Woyke,T., Wu,D.,
            Gronow,S., Wellnitz,S., Brambilla,E., Klenk,H.-P. and Eisen,J.A.
  CONSRTM   US DOE Joint Genome Institute (JGI-PGF)
  TITLE     Direct Submission
  JOURNAL   Submitted (17-FEB-2011) US DOE Joint Genome Institute, 2800
            Mitchell Drive, Walnut Creek, CA 94598-1698, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence is identical to ADY35284.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Bacteroides salanitronis DSM 18170"
                     /strain="DSM 18170"
                     /isolation_source="cecum"
                     /host="chicken"
                     /culture_collection="DSMZ:DSM 18170"
                     /db_xref="taxon:667015"
                     /country="Japan"
                     /collected_by="P.T.N. Lan"
     Protein         1..507
                     /product="xylan 1,4-beta-xylosidase"
                     /EC_number="3.2.1.37"
                     /calculated_mol_wt=55532
     sig_peptide     1..23
                     /note="Signal predicted by SignalP 3.0 HMM"
                     /calculated_mol_wt=2475
     Region          31..309
                     /region_name="GH43_62_32_68"
                     /note="Glycosyl hydrolase families: GH43, GH62, GH32,
                     GH68; cl14647"
                     /db_xref="CDD:265439"
     Region          41..488
                     /region_name="XynB"
                     /note="Beta-xylosidase [Carbohydrate transport and
                     metabolism]; COG3507"
                     /db_xref="CDD:226038"
     Site            order(47,146,201)
                     /site_type="active"
                     /db_xref="CDD:185718"
     CDS             1..507
                     /locus_tag="Bacsa_0690"
                     /coded_by="complement(NC_015164.1:743908..745431)"
                     /note="COGs: COG3507 Beta-xylosidase;
                     InterPro IPR006710;
                     KEGG: xcv:XCV0150 xylosidase precursor;
                     PFAM: Glycoside hydrolase, family 43;
                     PRIAM: Xylan 1,4-beta-xylosidase;
                     SPTR: Glycosyl hydrolase, family 43;
                     PFAM: Glycosyl hydrolases family 43"
                     /transl_table=11
                     /db_xref="GeneID:10258587"
CONTIG      join(WP_013616739.1:1..507)
ORIGIN      
        1 mrkqtfaala sllmlgsnip lqaqlppsdi lnedrttirl legdnpdpsi irygnkyymi
       61 hssfvytpgl vvyesdnlvd whpcsialpe yngeiwapdl cvykdrfyiy lptrdaqkkk
      121 tnmviwadsp egpwskpvdl kigeidpehv tdadgkryll lssgtlhpls edgtritgdp
      181 ihiydewpip eewdiegvsl eginikkvge yyylfaaegg tagpptshmv vqarsksimg
      241 pwenapenpl lrtrsrqekw wskghgsivd tpdgrlfmlf hayengfqtl grqtlirelv
      301 lgedgwlhlk eggislpapq rlketrmndl vwqtyqehai tdrfsffpee dkilikgkgn
      361 npqegsplla rtsahryeve acfelkspda saglvayyne dyhfgfgfnr eqilryrrgq
      421 vsrskslype ankqgklwlk mrndehvlsa wysadgkewh kypwafeisg ahhnilygfl
      481 fvrpaiyagg gevevthfvl rnldemd
//
DBGET integrated database retrieval system