GenomeNet

Database: RefSeq
Entry: YP_327065
LinkDB: YP_327065
Original site: YP_327065 
LOCUS       YP_327065                174 aa            linear   CON 16-DEC-2014
DEFINITION  30S ribosomal protein S4P [Natronomonas pharaonis DSM 2160].
ACCESSION   YP_327065
VERSION     YP_327065.1  GI:76802057
DBLINK      BioProject: PRJNA58435
DBSOURCE    REFSEQ: accession NC_007426.1
KEYWORDS    RefSeq.
SOURCE      Natronomonas pharaonis DSM 2160
  ORGANISM  Natronomonas pharaonis DSM 2160
            Archaea; Euryarchaeota; Halobacteria; Halobacteriales;
            Halobacteriaceae; Natronomonas.
REFERENCE   1  (residues 1 to 174)
  AUTHORS   Pfeiffer,F., Broicher,A., Gillich,T., Klee,K., Mejia,J., Rampp,M.
            and Oesterhelt,D.
  TITLE     Genome information management and integrated data analysis with
            HaloLex
  JOURNAL   Arch. Microbiol. 190 (3), 281-299 (2008)
   PUBMED   18592220
REFERENCE   2  (residues 1 to 174)
  AUTHORS   Falb,M., Pfeiffer,F., Palm,P., Rodewald,K., Hickmann,V., Tittor,J.
            and Oesterhelt,D.
  TITLE     Living with two extremes: conclusions from the genome sequence of
            Natronomonas pharaonis
  JOURNAL   Genome Res. 15 (10), 1336-1343 (2005)
   PUBMED   16169924
REFERENCE   3  (residues 1 to 174)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (03-OCT-2005) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   4  (residues 1 to 174)
  AUTHORS   Pfeiffer,F.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-JAN-2005) Dept. Membrane Biochemistry,
            Max-Planck-Institute of Biochemistry, Am Klopferspitz 18,
            Martinsried D-82152, Germany
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CAI49506.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Natronomonas pharaonis DSM 2160"
                     /strain="DSM 2160; Gabara"
                     /db_xref="taxon:348780"
                     /note="type strain of Natronomonas pharaonis DSM 2160"
     Protein         1..174
                     /product="30S ribosomal protein S4P"
                     /calculated_mol_wt=19307
     Region          1..174
                     /region_name="rps4p"
                     /note="30S ribosomal protein S4P; Validated; PRK04051"
                     /db_xref="CDD:179730"
     Region          105..170
                     /region_name="S4"
                     /note="S4/Hsp/ tRNA synthetase RNA-binding domain; The
                     domain surface is populated by conserved, charged residues
                     that define a likely RNA-binding site;  Found in stress
                     proteins, ribosomal proteins and tRNA synthetases; This
                     may imply a hitherto unrecognized...; cd00165"
                     /db_xref="CDD:238095"
     Site            order(106,118..119,121..122,124..125,128..129,131,
                     138..145,147)
                     /site_type="other"
                     /note="RNA binding surface [nucleotide binding]"
                     /db_xref="CDD:238095"
     CDS             1..174
                     /gene="rps4p"
                     /locus_tag="NP2830A"
                     /coded_by="NC_007426.1:1364843..1365367"
                     /note="primary rRNA binding protein; nucleates 30S
                     assembly; involved in translational accuracy with proteins
                     S5 and S12; interacts with protein S5; involved in
                     autogeneously regulating ribosomal proteins by binding to
                     pseudoknot structures in the polycistronic mRNA; interacts
                     with transcription complex and functions similar to
                     protein NusA in antitermination"
                     /transl_table=11
                     /db_xref="GeneID:3703182"
CONTIG      join(WP_011323131.1:1..174)
ORIGIN      
        1 malgsntkfy etpnhpfqge riaeegdlls ryglvnkeel wraqselrdy rrearrlige
       61 aqgdtvaaae agseflarlk rigvlddeds lddilsldvt dilerrlqtv ayrkglgntp
      121 qqarqfiahg hvtvngarvs apsykvdvae egeiefdets pladdlhper aegq
//
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