LOCUS       YP_479935                338 aa            linear   CON 10-JUN-2013
DEFINITION  polyprenyl synthetase [Frankia sp. CcI3].
ACCESSION   YP_479935
VERSION     YP_479935.1  GI:86739535
DBLINK      Project: 58397
            BioProject: PRJNA58397
DBSOURCE    REFSEQ: accession NC_007777.1
KEYWORDS    .
SOURCE      Frankia sp. CcI3
  ORGANISM  Frankia sp. CcI3
            Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;
            Frankineae; Frankiaceae; Frankia.
REFERENCE   1  (residues 1 to 338)
  AUTHORS   Normand,P., Lapierre,P., Tisa,L.S., Gogarten,J.P., Alloisio,N.,
            Bagnarol,E., Bassi,C.A., Berry,A.M., Bickhart,D.M., Choisne,N.,
            Couloux,A., Cournoyer,B., Cruveiller,S., Daubin,V., Demange,N.,
            Francino,M.P., Goltsman,E., Huang,Y., Kopp,O.R., Labarre,L.,
            Lapidus,A., Lavire,C., Marechal,J., Martinez,M., Mastronunzio,J.E.,
            Mullin,B.C., Niemann,J., Pujic,P., Rawnsley,T., Rouy,Z.,
            Schenowitz,C., Sellstedt,A., Tavares,F., Tomkins,J.P., Vallenet,D.,
            Valverde,C., Wall,L.G., Wang,Y., Medigue,C. and Benson,D.R.
  CONSRTM   US DOE Joint Genome Institute
  TITLE     Genome characteristics of facultatively symbiotic Frankia sp.
            strains reflect host range and host plant biogeography
  JOURNAL   Genome Res. 17 (1), 7-15 (2007)
   PUBMED   17151343
REFERENCE   2  (residues 1 to 338)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-FEB-2006) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (residues 1 to 338)
  AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
            Glavina,T., Hammon,N., Israni,S., Pitluck,S., Goltsman,E.,
            Martinez,M., Schmutz,J., Larimer,F., Land,M., Kyrpides,N.,
            Lykidis,A., Francino,P., Benson,D.R., Huang,Y., Mastronunzio,J.,
            Bickhart,D., Niemann,J., Rawnsley,T., Tisa,L.S. and Richardson,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-JAN-2006) US DOE Joint Genome Institute, 2800
            Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from ABD10206.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..338
                     /organism="Frankia sp. CcI3"
                     /strain="CcI3"
                     /db_xref="taxon:106370"
     Protein         1..338
                     /product="polyprenyl synthetase"
                     /calculated_mol_wt=35337
     Region          37..252
                     /region_name="Trans_IPPS_HT"
                     /note="Trans-Isoprenyl Diphosphate Synthases,
                     head-to-tail; cd00685"
                     /db_xref="CDD:173833"
     Region          49..316
                     /region_name="IspA"
                     /note="Geranylgeranyl pyrophosphate synthase [Coenzyme
                     metabolism]; COG0142"
                     /db_xref="CDD:223220"
     Site            order(86,89..91,93..95,97..98,103..104,159,162,183..184,
                     187,224..225,228,238,243,248)
                     /site_type="other"
                     /note="substrate binding pocket [chemical binding]"
                     /db_xref="CDD:173833"
     Site            89..98
                     /site_type="other"
                     /note="chain length determination region"
                     /db_xref="CDD:173833"
     Site            order(94..95,98,103..104,162,183,224..225,228,238,243,248)
                     /site_type="other"
                     /note="substrate-Mg2+ binding site"
                     /db_xref="CDD:173833"
     Site            order(94..95,98,103..104,183,224..225)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:173833"
     Site            order(94..95,98,103..104,162,183)
                     /site_type="other"
                     /note="aspartate-rich region 1"
                     /db_xref="CDD:173833"
     Site            order(100..114,231..232,238..243,246..250)
                     /site_type="active"
                     /note="active site lid residues [active]"
                     /db_xref="CDD:173833"
     Site            order(224..225,228,238,243,248)
                     /site_type="other"
                     /note="aspartate-rich region 2"
                     /db_xref="CDD:173833"
     CDS             1..338
                     /locus_tag="Francci3_0822"
                     /coded_by="NC_007777.1:958653..959669"
                     /transl_table=11
                     /db_xref="InterPro:IPR000092"
                     /db_xref="GeneID:3906449"
CONTIG      join(WP_011435275.1:1..338)
ORIGIN      
        1 mtmtvpdaie rgrtltvpal ratvdrlhpr lrhvvayhrg wvdaegapls ggggklvrpa
       61 lallsaqaag apaetglpaa vavelvhdfs llhddlmdgd terrhrptaw tifgadgail
      121 agdallglat qvllevegep grraalilga gvqdlvrgqa edlmfekrsd vsvaetlhme
      181 dgktgallac saslgavlag agddmvnala eygsrlgtaf qliddllgiw gdpsvtgkpv
      241 lsdlrsrkks vpvvvaleag gaaaeelraf ltgtgestea elthiadlie raggrdwtta
      301 eadgqlkace nvlrslsmpa eieaellala rfvterdr
//