LOCUS YP_580810 580 aa linear BCT 22-DEC-2012
DEFINITION hypothetical protein Pcryo_1549 [Psychrobacter cryohalolentis K5].
ACCESSION YP_580810
VERSION YP_580810.1 GI:93006373
DBLINK Project: 58373
BioProject: PRJNA58373
DBSOURCE REFSEQ: accession NC_007969.1
KEYWORDS .
SOURCE Psychrobacter cryohalolentis K5
ORGANISM Psychrobacter cryohalolentis K5
Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
Moraxellaceae; Psychrobacter.
REFERENCE 1 (residues 1 to 580)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Brettin,T., Bruce,D., Han,C., Tapia,R., Sims,D.R., Gilna,P.,
Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E. and
Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of chromosome of Psychrobacter cryohalolentis K5
JOURNAL Unpublished
REFERENCE 2 (residues 1 to 580)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (20-APR-2006) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (residues 1 to 580)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Brettin,T., Bruce,D., Han,C., Tapia,R., Sims,D.R., Gilna,P.,
Schmutz,J., Larimer,F., Land,M., Kyrpides,N., Kim,E. and
Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (30-MAR-2006) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence is identical to ABE75326.
Method: conceptual translation.
FEATURES Location/Qualifiers
source 1..580
/organism="Psychrobacter cryohalolentis K5"
/strain="K5"
/db_xref="taxon:335284"
Protein 1..580
/product="hypothetical protein"
/calculated_mol_wt=62306
Region 20..571
/region_name="PRK07524"
/note="hypothetical protein; Provisional"
/db_xref="CDD:168991"
Region 25..182
/region_name="TPP_PYR_POX_like"
/note="Pyrimidine (PYR) binding domain of POX and related
proteins; cd07035"
/db_xref="CDD:132918"
Site order(38,43..44,48,52,60..66,69,72..73,76..77,79..81,93,
100,104,107..108)
/site_type="other"
/note="PYR/PP interface [polypeptide binding]"
/db_xref="CDD:132918"
Site order(43..45,48,52,61,63..66,68,93,96..97,99..100,103,140,
143)
/site_type="other"
/note="dimer interface [polypeptide binding]"
/db_xref="CDD:132918"
Site order(43,67,93,97)
/site_type="other"
/note="TPP binding site [chemical binding]"
/db_xref="CDD:132918"
Region 229..362
/region_name="TPP_enzyme_M"
/note="Thiamine pyrophosphate enzyme, central domain;
pfam00205"
/db_xref="CDD:201080"
Region 399..563
/region_name="TPP_enzymes"
/note="Thiamine pyrophosphate (TPP) enzyme family,
TPP-binding module; found in many key metabolic enzymes
which use TPP (also known as thiamine diphosphate) as a
cofactor. These enzymes include, among others, the E1
components of the pyruvate, the acetoin and...; cd00568"
/db_xref="CDD:48162"
Site order(446,469..472,497,499)
/site_type="other"
/note="TPP-binding site [chemical binding]"
/db_xref="CDD:48162"
CDS 1..580
/locus_tag="Pcryo_1549"
/coded_by="complement(NC_007969.1:1901206..1902948)"
/transl_table=11
/db_xref="InterPro:IPR011766"
/db_xref="InterPro:IPR012000"
/db_xref="InterPro:IPR012001"
/db_xref="GeneID:4034480"
ORIGIN
1 mthslqtpss lpnsaptass ltcgellvqw leyygvetvf gipgvhtvel yrglpntdir
61 hvtprheqga gfmadgyyra sgkvgvcfii tgpgmtnimt amaqaladsi pmlvissvnk
121 vqhtgsgegh lhelhdqqgm vskvalmskt iwqpeslpkv iaeafalfng arpgpvhiql
181 pidvitadas hvakppklnk ldaslnsqst nnistqlqan kplphpaqld liveqlksak
241 npvllygggc vdvnhdaqkl aelidaptfl tinakgllpp ahplslgsnq sldvgravis
301 eadlvlaigt elgetdydvf fnggfqingt liridcdaqq lqrpfradia llsdaqmais
361 glctrlenqp lnhqaaprva kvkqalieem tpnfagqnal lqlirdevkd vifvgdstqp
421 vysgnlgfea latrrwfnss tgfgtlgygl paaigamigs kapvvsligd ggiqftitel
481 icaaeldlpl ivllwnnqgy geirrymeeg glpligvnik tpnfeplaag fgagyrritd
541 kqqllealke dikgkqpiiy evdeadefll emgksftcfs
//