GenomeNet

Database: RefSeq
Entry: YP_580810
LinkDB: YP_580810
Original site: YP_580810 
LOCUS       YP_580810                580 aa            linear   BCT 22-DEC-2012
DEFINITION  hypothetical protein Pcryo_1549 [Psychrobacter cryohalolentis K5].
ACCESSION   YP_580810
VERSION     YP_580810.1  GI:93006373
DBLINK      Project: 58373
            BioProject: PRJNA58373
DBSOURCE    REFSEQ: accession NC_007969.1
KEYWORDS    .
SOURCE      Psychrobacter cryohalolentis K5
  ORGANISM  Psychrobacter cryohalolentis K5
            Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
            Moraxellaceae; Psychrobacter.
REFERENCE   1  (residues 1 to 580)
  AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
            del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
            Brettin,T., Bruce,D., Han,C., Tapia,R., Sims,D.R., Gilna,P.,
            Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E. and
            Richardson,P.
  CONSRTM   US DOE Joint Genome Institute
  TITLE     Complete sequence of chromosome of Psychrobacter cryohalolentis K5
  JOURNAL   Unpublished
REFERENCE   2  (residues 1 to 580)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-APR-2006) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (residues 1 to 580)
  AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
            del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
            Brettin,T., Bruce,D., Han,C., Tapia,R., Sims,D.R., Gilna,P.,
            Schmutz,J., Larimer,F., Land,M., Kyrpides,N., Kim,E. and
            Richardson,P.
  CONSRTM   US DOE Joint Genome Institute
  TITLE     Direct Submission
  JOURNAL   Submitted (30-MAR-2006) US DOE Joint Genome Institute, 2800
            Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence is identical to ABE75326.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..580
                     /organism="Psychrobacter cryohalolentis K5"
                     /strain="K5"
                     /db_xref="taxon:335284"
     Protein         1..580
                     /product="hypothetical protein"
                     /calculated_mol_wt=62306
     Region          20..571
                     /region_name="PRK07524"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:168991"
     Region          25..182
                     /region_name="TPP_PYR_POX_like"
                     /note="Pyrimidine (PYR) binding domain of POX and related
                     proteins; cd07035"
                     /db_xref="CDD:132918"
     Site            order(38,43..44,48,52,60..66,69,72..73,76..77,79..81,93,
                     100,104,107..108)
                     /site_type="other"
                     /note="PYR/PP interface [polypeptide binding]"
                     /db_xref="CDD:132918"
     Site            order(43..45,48,52,61,63..66,68,93,96..97,99..100,103,140,
                     143)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:132918"
     Site            order(43,67,93,97)
                     /site_type="other"
                     /note="TPP binding site [chemical binding]"
                     /db_xref="CDD:132918"
     Region          229..362
                     /region_name="TPP_enzyme_M"
                     /note="Thiamine pyrophosphate enzyme, central domain;
                     pfam00205"
                     /db_xref="CDD:201080"
     Region          399..563
                     /region_name="TPP_enzymes"
                     /note="Thiamine pyrophosphate (TPP) enzyme family,
                     TPP-binding module; found in many key metabolic enzymes
                     which use TPP (also known as thiamine diphosphate) as a
                     cofactor. These enzymes include, among others, the E1
                     components of the pyruvate, the acetoin and...; cd00568"
                     /db_xref="CDD:48162"
     Site            order(446,469..472,497,499)
                     /site_type="other"
                     /note="TPP-binding site [chemical binding]"
                     /db_xref="CDD:48162"
     CDS             1..580
                     /locus_tag="Pcryo_1549"
                     /coded_by="complement(NC_007969.1:1901206..1902948)"
                     /transl_table=11
                     /db_xref="InterPro:IPR011766"
                     /db_xref="InterPro:IPR012000"
                     /db_xref="InterPro:IPR012001"
                     /db_xref="GeneID:4034480"
ORIGIN      
        1 mthslqtpss lpnsaptass ltcgellvqw leyygvetvf gipgvhtvel yrglpntdir
       61 hvtprheqga gfmadgyyra sgkvgvcfii tgpgmtnimt amaqaladsi pmlvissvnk
      121 vqhtgsgegh lhelhdqqgm vskvalmskt iwqpeslpkv iaeafalfng arpgpvhiql
      181 pidvitadas hvakppklnk ldaslnsqst nnistqlqan kplphpaqld liveqlksak
      241 npvllygggc vdvnhdaqkl aelidaptfl tinakgllpp ahplslgsnq sldvgravis
      301 eadlvlaigt elgetdydvf fnggfqingt liridcdaqq lqrpfradia llsdaqmais
      361 glctrlenqp lnhqaaprva kvkqalieem tpnfagqnal lqlirdevkd vifvgdstqp
      421 vysgnlgfea latrrwfnss tgfgtlgygl paaigamigs kapvvsligd ggiqftitel
      481 icaaeldlpl ivllwnnqgy geirrymeeg glpligvnik tpnfeplaag fgagyrritd
      541 kqqllealke dikgkqpiiy evdeadefll emgksftcfs
//
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