LOCUS YP_586218 97 aa linear CON 10-JUN-2013
DEFINITION hypothetical protein Rmet_4082 [Cupriavidus metallidurans CH34].
ACCESSION YP_586218
VERSION YP_586218.1 GI:94313009
DBLINK Project: 57815
BioProject: PRJNA57815
DBSOURCE REFSEQ: accession NC_007974.2
KEYWORDS .
SOURCE Cupriavidus metallidurans CH34
ORGANISM Cupriavidus metallidurans CH34
Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
Burkholderiaceae; Cupriavidus.
REFERENCE 1 (residues 1 to 97)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Martinez,M.,
Goltsman,E., Pitluck,S., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Kim,E., Mergeay,M., Benotmane,M.A.,
Vallaeys,T., Michaux,A., Monchy,S., Dunn,J., McCorkle,S.,
Taghavi,S., van der Lelie,D. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of the chromosome of Ralstonia metallidurans CH34
JOURNAL Unpublished
REFERENCE 2 (residues 1 to 97)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (07-JUN-2011) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (residues 1 to 97)
AUTHORS Janssen,P.J., Van Houdt,R., Moors,H., Monsieurs,P., Morin,N.,
Benotmane,R., Lapidus,A., McCorkle,S., Monchy,S., Taghavi,S., van
der Lelie,N., Dunn,J., Leys,N. and Mergeay,M.
TITLE Direct Submission
JOURNAL Submitted (04-FEB-2010) Instute of Environment, Health and Safety,
SCK-CEN, Boeretang 200, Mol 2400, Belgium
REMARK Sequence update by submitter
REFERENCE 4 (residues 1 to 97)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Martinez,M.,
Goltsman,E., Pitluck,S., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Kim,E., Mergeay,M., Benotmane,M.A.,
Vallaeys,T., Michaux,A., Monchy,S., Dunn,J., McCorkle,S.,
Taghavi,S., van der Lelie,D. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (18-APR-2006) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence is identical to ABF10949.
URL -- http://www.jgi.doe.gov
JGI Project ID: 2351356
Source DNA and bacteria available from John J. Dunn (jdunn@bnl.gov)
Contacts: John J. Dunn (jdunn@bnl.gov)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-PGF
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. it is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
Method: conceptual translation.
FEATURES Location/Qualifiers
source 1..97
/organism="Cupriavidus metallidurans CH34"
/strain="CH34"
/db_xref="taxon:266264"
/plasmid="megaplasmid"
Protein 1..97
/product="hypothetical protein"
/calculated_mol_wt=10473
Region 4..94
/region_name="GYD"
/note="GYD domain; pfam08734"
/db_xref="CDD:149709"
CDS 1..97
/locus_tag="Rmet_4082"
/coded_by="complement(NC_007974.2:650954..651247)"
/transl_table=11
/db_xref="GeneID:4040940"
CONTIG join(WP_008644323.1:1..97)
ORIGIN
1 mtryivlasf tdqgirtvke ttkraaavre lgaqlgvqvk dvfwtlgkyd vvltleaqdd
61 tvvtafglsv galgnvhtqt lrafdatemq ailgkmr
//