KEGG   Cupriavidus necator H16: H16_A0377Help
Entry
H16_A0377         CDS       T00416                                 

Gene name
h16_A0377
Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
reh  Cupriavidus necator H16
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:reh00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    H16_A0377 (h16_A0377)
Enzymes [BR:reh01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     H16_A0377 (h16_A0377)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     H16_A0377 (h16_A0377)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
1:395212..396090
Genome map
AA seq 292 aa AA seqDB search
MPELPEVEVTRRGLLPHVVGRRIAAVTVRHRGLRWPVDPQLEMRLAQRVVRRIERRGKYL
LLECVSEAAGEPAGWLLVHLGMTGTLRVLPEAPSPGAHDHLDLVLAPGPGAALGTKPGTI
VLRFRDPRRFGAILWSTLPEAELPSHPLLRTLGIEPFDPAFDGAWLHRHTRGRSAAIKTV
LLAGGIVVGVGNIYASESLFRAGIRPTTPAGRLSRARCDRLAQAVRETLAQAIERGGSTL
RDFVGSDGASGYFQLDCLVYDRAGQPCRVCATPVRQIVQGQRSTFYCPNCQH
NT seq 879 nt NT seq  +upstreamnt  +downstreamnt
atgccagaattgcccgaggtcgaggtgacccggcgcggcttgctgccgcatgtggtggga
cggcgcatcgccgcggtcacggtgcgccaccgcggcctgcgctggccggtcgatccgcaa
ctggaaatgcggctggcccagcgcgtggtacgccggatcgagcgccgcggcaaatacctg
ctgctggaatgcgtgagcgaggcggcgggcgagccggccggctggctgctggtccacctg
ggcatgaccgggacgctgcgggtgctgcccgaggcgccgtcgcctggcgcgcacgaccac
cttgacctggtgctggcccccggtcccggcgccgcgctgggcaccaaaccgggcaccatc
gtgttgcgtttccgcgatccgcgccgcttcggcgccatcctgtggagcacgctgcccgag
gctgaactgccgtcgcacccgctgctgcgcacgctcggcatcgagcccttcgatcctgcc
ttcgacggcgcctggctgcaccgccacacgcgcgggcgcagcgccgccatcaagaccgtg
ctgctggccggcggcatcgtggtcggcgtgggcaatatctatgcgtccgaaagcctgttc
cgcgccggcatccgtccgaccaccccggccgggcgcctgagccgcgcgcgctgcgaccgc
ctggcgcaggcggtgcgcgagaccctggcacaggcaatcgagcgcgggggcagcacgctg
cgcgactttgtcggcagcgacggcgccagcggctatttccagctggattgcctggtctac
gaccgcgccggccagccatgccgggtctgcgccacgccggtgcgccagatcgtgcagggc
cagcgctcgaccttctactgcccgaactgccagcactga

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