KEGG   Rhizobium etli bv. mimosae IE4771: IE4771_CH04460
Entry
IE4771_CH04460    CDS       T03310                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
rei  Rhizobium etli bv. mimosae IE4771
Pathway
rei03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rei00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    IE4771_CH04460 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rei03021]
    IE4771_CH04460 (rho)
   03019 Messenger RNA biogenesis [BR:rei03019]
    IE4771_CH04460 (rho)
Transcription machinery [BR:rei03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     IE4771_CH04460 (rho)
Messenger RNA biogenesis [BR:rei03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     IE4771_CH04460 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB AAA_22 AAA_25 NACHT DUF6360 Spore_III_AA AAA
Other DBs
NCBI-ProteinID: AIC29505
UniProt: A0A060IBN3
Position
complement(4472375..4473640)
AA seq 421 aa
MAEMKLQELKSKSPTDLLAFAESLEVENASTMRKQELMFAILKMLASQDVEIIGEGVVEV
LQDGFGFLRSANANYLPGPDDIYISPSQIRRFSLKTGDTVEGPIRGPKEGERYFALLKVN
TINFDDPEKIRHKVHFDNLTPLYPNERFKMELDIPTSKDLSPRVIDLVAPLGKGQRGLIV
APPRTGKTVLLQNIAHSITANHPECYLIVLLIDERPEEVTDMQRSVRGEVISSTFDEPAV
RHVQVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRP
KRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIFPA
MDILKSGTRKEDLLVPRQDLQKIFVLRRILAPMGTTDAIEFLIDKLKQTKNNSDFFDSMN
T
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggctgaaatgaagcttcaggaacttaagagcaaatccccgacggatcttctggctttc
gccgaatcgctcgaggtcgagaatgcaagcacgatgcgcaaacaggaattgatgtttgcc
atcctcaagatgctagccagccaggatgtggagatcatcggcgaaggggtagtcgaagtg
ctccaggacggcttcggcttcctgcgctcggccaacgccaactacctgcccggccctgac
gacatttatatctcgccatcgcagatccgccgtttctctttgaagacaggcgacacggtc
gagggaccgatccgcggaccgaaggaaggcgagcgctatttcgcgctgctcaaggtcaac
accatcaatttcgacgatccggaaaagatccgtcacaaggttcatttcgacaatctgacg
ccgctctatccgaatgagcgcttcaagatggaactcgatattccgacttccaaggatctg
tcgccccgcgtgatcgatctcgtggcgccgctcggcaagggtcagcgcggcctgatcgtt
gcgccgccgcgcaccggtaagaccgtccttcttcagaacattgcgcattcgatcacggcc
aatcatccggaatgctatctcatcgtgcttctgatcgacgaacgtccggaggaagtcacc
gacatgcagcgttccgtccgcggcgaggtgatttcctcgacctttgacgaaccggcggtg
cgtcacgtccaggtggctgaaatggtcatcgaaaaggccaagcgtctcgtcgaacatggc
cgtgacgtcgtcattctgctcgactcgatcacgcgcctcggccgcgcctacaacaccgtc
gtcccctcctccggcaaggttctgaccggcggtgtcgacgccaatgcgctgcagcggccg
aagcgcttcttcggcgccgcgcgcaacatcgaggaaggtggttctctgaccatcatcgca
acggcgctgatcgataccggcagccgcatggacgaagtgatcttcgaagagttcaagggt
accggcaactcggaaatcgtcctcgaccgcaaggtcgccgacaagcgcatcttcccggcg
atggacatcctcaagtccggcacgcgtaaggaagacctgctcgtgccacgccaggatctg
cagaagatcttcgttcttcgtcgtatccttgctccgatgggcaccacggatgcaatcgaa
ttcctgatcgacaagctcaaacagacgaagaacaattccgatttcttcgactcgatgaat
acctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (19)   

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