KEGG   Rhizobium etli bv. mimosae IE4771: IE4771_PC00165
Entry
IE4771_PC00165    CDS       T03310                                 
Name
(GenBank) DNA topoisomerase I protein
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
rei  Rhizobium etli bv. mimosae IE4771
Brite
KEGG Orthology (KO) [BR:rei00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rei03032]
    IE4771_PC00165
   03400 DNA repair and recombination proteins [BR:rei03400]
    IE4771_PC00165
Enzymes [BR:rei01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     IE4771_PC00165
DNA replication proteins [BR:rei03032]
 Prokaryotic type
  DNA Topoisomerases
   IE4771_PC00165
DNA repair and recombination proteins [BR:rei03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      IE4771_PC00165
SSDB
Motif
Pfam: Topoisom_I Top1B_N_bact
Other DBs
NCBI-ProteinID: AIC30290
UniProt: A0A060IE26
Position
pRetIE4771c:194205..195212
AA seq 335 aa
MNAEVITELGLIYVSDTEPGIRRRRKGKGFSYVMPDGTTLSDELQRARIGALGLPPAYEN
VWICLYENGHLQATGIDARGRKQYRYHKDWQSFRSAGKFHQLIEFGRALPKIRRTVLRHL
DTGTEDVNGVLAALTTLLDEAHLRVGNQAYVRENGTYGATTLLKRHLKIVDGRIELKFRA
KGGKRVQRSLKHPRLQKILEEIADLPGRQLFVWKDESGALKPVDSGRLNAYLTEISGIPI
SAKTFRTWAGSLAAFGAAREKIVAGGRPTVKDMSEAAAEALHNTPAISRSSYIHPAIIAL
AGNDHPLIEAGNEPLRGLRAEENRLLDFLTREIEE
NT seq 1008 nt   +upstreamnt  +downstreamnt
atgaatgccgaagtcatcaccgaacttggcctcatctatgtcagcgataccgaaccgggc
atccgcagacgaaggaaaggcaagggcttcagctatgtcatgccggatggtacgacgctt
tccgatgagttgcagcgggcgcgcatcggcgcactcggcctgccgccggcctatgagaat
gtctggatctgtctctacgagaacggccacctccaggcgaccggcatcgatgcgcgcggg
cgcaagcaatatcgctatcacaaggactggcaatccttccgcagcgccggaaaattccac
cagctgatcgaattcggccgggcattgccgaagatccgccgcaccgtgctgcgccatctc
gacaccggtacggaagatgtcaacggcgtgctggcggcactgacgacgctgctcgacgag
gcgcatctgcgggtcggcaaccaggcctatgtcagggagaacggcacctatggtgcgacg
acgctattgaagcggcacttgaagattgtcgacggacggatcgagctgaaattccgcgcc
aagggcggcaagcgcgtccagcgcagcctcaagcatcccaggctgcagaagatcctggaa
gagatcgccgacctgcccggccgtcagcttttcgtctggaaggatgaaagcggcgcgctg
aaaccggtcgattccggccggctgaatgcctatctgaccgagatatcgggcattccgatt
tccgctaagacattccgcacctgggccggatcgttggcggccttcggtgcggcccgcgaa
aaaattgtcgccggtggccggccgacggtgaaggacatgtcggaggctgcggccgaagcg
ctgcacaatacgccggcaatctcacgctcgagctatatccatccggcaatcattgcgctc
gccggcaatgaccatccgttgatcgaggctggcaacgagccgctgcggggcttgcgggca
gaagaaaacaggctacttgatttcctgacacgcgagatcgaggaatga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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