KEGG   Rhizobium etli bv. mimosae Mim1: REMIM1_PF00559
Entry
REMIM1_PF00559    CDS       T02778                                 
Name
(GenBank) dipeptide ABC transporter ATP-binding protein
  KO
K02031  peptide/nickel transport system ATP-binding protein
K02032  peptide/nickel transport system ATP-binding protein
Organism
rel  Rhizobium etli bv. mimosae Mim1
Pathway
rel02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:rel00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    REMIM1_PF00559
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:rel02000]
    REMIM1_PF00559
Transporters [BR:rel02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    REMIM1_PF00559
SSDB
Motif
Pfam: ABC_tran AAA_21 oligo_HPY SMC_N AAA_16 AAA_22 AAA nSTAND3 AAA_25 AAA_29 RsgA_GTPase ATP-synt_ab AAA_5 Mg_chelatase nSTAND1 PRK AAA_24 NACHT NB-ARC AAA_18 IstB_IS21 AAA_33 Sigma54_activat MMR_HSR1 RNA_helicase CbiA ATPase Rad17 PhoH DUF87 Roc DUF2813 RecA
Other DBs
NCBI-ProteinID: AGS26224
UniProt: S5SXK0
Position
pRetMIM1f:complement(599045..600700)
AA seq 551 aa
MTNLVEIRDLRVEATTDSGRRVEIIKGVSLDIAEGEIVALIGESGSGKTTIALTLMGHTR
PGCRISGGTVSVAGKDLVALSEKQRAKLRGTQVAYVPQSAAAAFNPATSIMDQVIEVTRI
HQLMSPEDARARAIELFRALSLPEPETIGSRYPHQVSGGQLQRLAAAMALIGNPTLVIFD
EPTTALDVTTQIEVLRAFKSVMKKGGISGVYVSHDLAVVAQIADRIVVLKGGETQEIGTT
EEILSNAKHPYTRQLLAAFEPKPRDAAGLAESATAPLLKIEDVVAGYGQRQADGLPLVRA
VEHVSLTLEKGRNLGIIGESGCGKSTLARTIAGILPAAVGKIVFDGTELRGNARERSRDQ
LREMQIVFQYADTALNPAKSVEDILARPLVFYHRMDRQARNARIDQLLDMVRLPRNLRHR
RPGELSGGQKQRVNFARALAADPKLILCDEITSALDTVVAAAVIDLLKELQRELGLSYIF
ISHDLSVVEAICDEIVVMYGGRKVEEITPSKVKTAQHPYSKLLFSSVPTLDPAWLDGLQQ
DPELVRAYCRH
NT seq 1656 nt   +upstreamnt  +downstreamnt
atgaccaatcttgtcgagattcgtgacctccgggtcgaagccaccaccgattccggccga
cgcgtcgagatcatcaagggtgtcagcctcgacattgccgagggtgagatcgtcgcgctg
attggcgagagtggctccgggaagaccacgatcgcgctgaccctcatgggtcatacccgc
ccgggctgtcgcatctccggcggcacggtatcagtcgccggcaaggatttggtggcgctg
agcgaaaagcagcgggccaaactacgcggcacccaggttgcttacgtgccgcaatcggcc
gctgccgctttcaacccggccacatcgatcatggatcaggtaatcgaagtcacgcgtatt
catcagctgatgtcaccggaagatgcgcgtgccagggcgatcgaacttttccgggcgctg
tccctgcccgaaccggaaacgatcggcagccgctatccgcaccaggtttccggcggtcag
ctgcagcgtctggctgccgccatggcgcttataggcaacccgacacttgtcatcttcgac
gagccgacgacggcgctcgatgtaacgacccagatcgaagtgctgcgtgctttcaaatcg
gtcatgaagaagggcggcatttcaggcgtctacgtctcccacgaccttgccgtcgttgca
cagatcgccgaccgcatcgtggtgttgaaaggcggggagacccaggaaatcggcaccacc
gaagaaatcctcagcaatgccaagcatccctatacccgccaactgcttgcagccttcgag
ccgaaaccgcgcgacgcggcaggccttgccgagagtgcaacagcgccgctcctgaagatc
gaggatgtcgttgcgggttatgggcaacgccaggccgacggccttcctctcgtacgcgcg
gtcgagcatgtgagcctgacactggaaaagggacgcaacctcggcattatcggcgaatcc
ggttgcggcaagtcgactctcgcacgcaccattgccggcattttgccggccgcagtcggc
aagatcgtcttcgacggcacggaactgcgcggcaatgcgcgcgagcgttcccgcgatcag
ctgcgcgagatgcagatcgttttccaatatgccgacaccgcgctcaatccggcaaaatcc
gtcgaggacatcctcgccaggccgctggttttttaccaccgcatggatcgacaggcgcga
aacgctcggatcgaccaactgctcgacatggtgcgccttccccgcaatctgcgccaccgc
cggccgggggaactgtcaggcgggcagaagcagcgcgtcaacttcgcccgggcgctcgcc
gccgatccgaagctcatcctctgcgacgagatcacctcggcactcgacaccgttgtcgct
gccgccgtcatcgacctgctcaaggaattgcagcgcgaactcggcctctcctacatcttc
atcagccacgacctctcggtggtggaagcgatttgcgacgaaatcgtcgtcatgtatggc
ggccggaaagtcgaggaaatcaccccctcgaaagtgaaaacggcgcagcatccctattcg
aaactgctcttctcgtccgtgccgacgctcgatccggcctggctcgacgggctgcagcag
gatccagaactcgtgcgggcttattgccggcactga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (33)   
   Pfam (33)   
All databases (42)   

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