KEGG   Rhizobium etli bv. phaseoli IE4803: IE4803_CH01641
Entry
IE4803_CH01641    CDS       T03667                                 
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
rep  Rhizobium etli bv. phaseoli IE4803
Brite
KEGG Orthology (KO) [BR:rep00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rep03032]
    IE4803_CH01641 (topA)
   03400 DNA repair and recombination proteins [BR:rep03400]
    IE4803_CH01641 (topA)
Enzymes [BR:rep01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     IE4803_CH01641 (topA)
DNA replication proteins [BR:rep03032]
 Prokaryotic type
  DNA Topoisomerases
   IE4803_CH01641 (topA)
DNA repair and recombination proteins [BR:rep03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      IE4803_CH01641 (topA)
SSDB
Motif
Pfam: Topoisom_bac Toprim_C_rpt Toprim zf-C4_Topoisom
Other DBs
NCBI-ProteinID: AJC78867
Position
complement(1657306..1659960)
AA seq 884 aa
MNVVVVESPAKAKTINKYLGSGYKVLASFGHVRDLPAKDGSVLPDQDFEMLWEVDGASAK
RMKDIAEAVKSSDGLFLATDPDREGEAISWHVLDMLNKKRVLNGKSVKRVVFNAITKKAV
LDAMADPRDIDVPLVDAYLARRALDYLVGFNLSPVLWRKLPGARSAGRVQSVALRLVCDR
ESEIERFISEEYWNLSALLKTPRGDEFEARLVSANGKRLPPRAIGNGEDAGRLKALLEGA
SYIVDTVEAKPVKRNPGPPFTTSTLQQAASSNLGFSASRTMQIAQKLYEGVDIGGETVGL
ITYMRTDGVQMAPEAIDAARRAILDQFGERYLPEKARFYSTKAKNAQEAHEAIRPTDFYR
SPDRLRKFLDADQIRLYELIWKRGIASQMASAEIERTTAEITADNKGEKAGLRAVGSVIR
FDGFIAAYTDQKEDGEQSDDGDEDGRLPEINAREALAKQKINSTQHFTEPPPRYSEASLI
KKMEELGIGRPSTYAATLATLRDRDYVTIDKRKLIPQAKGRLVTAFLESFFTKYVEYDFT
ADLEEKLDRISAGELNWKQVLRDFWKDFFAQIEDTKELRVTNVLDSLNEALAPLVFPKRE
DGSDPRICQVCGTGNLSLKLGKYGAFVGCSNYPECNYTRQLSSENGGEAEGVALNEPKNL
GTDPTTGEELTLRSGRFGPYIQRGDGKEAKRASLPKGWKPEDIDYEKAMALISLPRDIGK
HPETGKMISSGIGRYGPFLLHDGSYANLETVEDVFSVGLNRAVTVIAEKANKAPGRGARG
TPAALKSLGDHPDGGAITVRDGKYGPYVNWGKVNATLPKGKDPQAITIEEALALITEKAG
KAPAGKPTKAKAKPKAAAAEAKTTKTAAKPKATKAKAPAKSKKG
NT seq 2655 nt   +upstreamnt  +downstreamnt
atgaatgttgtagtggtggaatcgcctgccaaggccaagacgatcaacaagtatctgggt
tcgggatacaaagtgctcgcctccttcggccatgtgcgcgatctgcctgccaaggatggc
tcggtcctccccgatcaggatttcgaaatgctctgggaggtcgatggggcctcggccaag
cggatgaaggatattgctgaggcggtgaaatcctccgacgggctttttctggcgaccgac
ccggatcgcgaaggcgaagcgatttcctggcacgtcctcgacatgctgaataagaagcgg
gtgctgaacggcaagtcggtcaagcgggtcgtcttcaacgcgattaccaagaaggcggtg
ctcgacgcgatggccgatccccgcgacatcgacgtgccgctggtcgacgcctatctggcg
cgccgtgcgctcgactatctcgtcggcttcaatctttcgcctgtcctatggcgcaagctg
cccggcgcgcgttcggccggacgcgtccagtcggtggcacttcgtctggtctgcgaccgt
gaatccgagatcgagcgcttcatttcggaagaatattggaatctctccgcacttctgaag
acgccgcgcggcgacgagttcgaggcaagactggtttcggcgaacggcaaacggctgccg
ccgcgcgccatcggcaacggcgaagatgccggccgcctgaaggcattactcgaaggcgca
agctatatcgtcgacacggtcgaggcgaagccggtcaagcgcaacccgggacctccgttt
acgacctcgacactgcagcaggccgcctcctccaatctcggcttctccgcgtcgcgcacc
atgcagatcgcccagaagctctatgaaggcgtcgatatcggcggcgagacggtcggtctc
atcacctatatgcgaaccgacggcgtgcagatggcgccagaggcgatcgatgcggcccgg
cgcgccatcctcgaccagttcggcgaacgctatctgcctgagaaggcgcgcttctattcg
accaaggcgaaaaacgcccaggaggcgcacgaggcgatccgtccgaccgatttctaccgc
tcgcccgatcgtctgcgcaaattcctagacgccgaccagatccggctttacgagctgatc
tggaagcgcggcatcgccagccagatggcgtcggccgagatcgagcgcacaacggctgaa
atcaccgccgacaacaagggcgagaaggccggcctacgcgccgtcggctcggtcatccgc
ttcgacggcttcatcgccgcctataccgaccagaaggaggacggcgagcagagcgacgat
ggcgacgaggatggccgcctgccggagatcaatgcacgcgaggcgctcgccaagcagaag
atcaattcgacgcagcatttcaccgaaccgccgccgcgttattcggaagcctcgctgatc
aagaagatggaagagctcggcatcggtcggccctccacctatgcggcgacgctggcgacg
ctgcgcgaccgcgactatgtgacgatcgacaagcgcaagctgatcccgcaggccaagggc
cggctggtgaccgccttcctcgagagcttcttcaccaaatatgtcgaatacgacttcacg
gccgacctcgaggaaaagctcgaccggatttcggccggcgagttgaactggaagcaggta
ctgcgcgatttctggaaggatttcttcgcgcagatcgaggacaccaaggaactgcgcgtc
accaatgtgctcgattcgctgaacgaggcgctggcgccgctggtcttcccgaagcgcgaa
gacggcagcgaccccaggatctgccaggtctgcggcacaggcaacctgtcgctgaagctc
ggcaaatacggcgccttcgtcggctgctcgaactatccggaatgcaactacacccgtcag
ctctcctccgaaaacggcggagaagcggaaggtgtcgccctcaacgagccgaagaacctc
ggcaccgatccgacaacgggcgaggaactgacgctgcgctcgggccgcttcgggccctat
atccagcgcggcgacggcaaggaagccaagcgcgcgtcgctgccgaagggctggaagccc
gaagacatcgactatgaaaaggcgatggctttgatctcgctgccgcgcgatatcggcaaa
catcccgagaccggcaagatgatctcgtcgggcattggccgctacggcccgttcctttta
catgacggttcctacgccaatctggaaactgtcgaggacgtgttctcggtcggcctcaac
cgcgccgtgaccgtcatcgccgaaaaggcgaacaaggcgccgggccggggtgcgcgcggc
acgccggcggcgctgaagtcgctcggcgatcatcccgacggcggcgccatcaccgttcgt
gacggaaaatacggtccctatgtcaactggggcaaggtcaacgccacgctgccgaagggc
aaggatccgcaggcgatcaccatcgaggaagcgctggcgctgatcaccgaaaaggccggc
aaggcgcccgctggaaagccgaccaaggcaaaagccaagccgaaggcggctgcggccgaa
gccaagaccaccaagacggccgccaagccgaaggcaacgaaggcgaaagcgccggcgaaa
tcgaaaaagggctga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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