KEGG   Rhodococcus erythropolis PR4: RER_35560
Entry
RER_35560         CDS       T00881                                 
Symbol
murF
Name
(GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
  KO
K01929  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
Organism
rer  Rhodococcus erythropolis PR4
Pathway
rer00300  Lysine biosynthesis
rer00550  Peptidoglycan biosynthesis
rer01100  Metabolic pathways
rer01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:rer00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    RER_35560 (murF)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    RER_35560 (murF)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    RER_35560 (murF)
Enzymes [BR:rer01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.10  UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
     RER_35560 (murF)
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C Mur_ligase NodS
Other DBs
NCBI-ProteinID: BAH34264
NITE: RER_35560
UniProt: C1A0X9
Position
complement(3899533..3901092)
AA seq 519 aa
MIPMTLSRIAEIVGGTLHDVDDPSTQVTGTVEFDSRKAGPGGLFLALPGARVDGHDHAEA
AVAAGAVAVLAARPVGVPAIVVPSVPNDGPSAVMLLEHDTDGSGAAVLHALGLLARAVVD
ELAAEGSASGGGLTLVGVTGSAGKTSTKDLIAALLRERGEVVAPPGSFNNELGLPWTVLR
ADEKTRFLVLEMSARGVGHVGELTKIAPPKIGVVLNVGTAHLGEFGSREAIAVAKGELVE
ALPSAADGGVAVLNADDRMVAAMASRTKARIVFVGQSEDCDVRATDVVVDDQARASFTLN
CSQGSARIRLAVHGEHHVSNALAAAAVALENGLAVADIARVLEGTKAASARRMEVTERAD
GVTVVNDSYNANPDSMRAALKALVSMARSDRHFGRRSWAVLGEMGELGPESVVEHDAIGR
LAVRLDVSKLIVVGTGRTSRAMHQGAVMEGSWGDESVVVPDAAAAIAILEAELEPGDLVL
VKASKSVELWTVAEAILAATPSDNTGDANTDGENGGDSQ
NT seq 1560 nt   +upstreamnt  +downstreamnt
atgatcccgatgacgctctctcggatcgccgagatcgtcggaggaaccctgcatgacgtc
gacgatccgtcgactcaggtgacaggaaccgtcgaattcgattcgcgcaaggctggtcca
ggtggactgtttctcgcactccccggcgcacgcgtcgacggtcacgaccatgcggaagcg
gcggtggccgccggtgcggtggcggtgctagcagcgcggccggtcggggttccggcgata
gttgtcccgtcggtaccgaacgacggtccgagcgctgtgatgttgctcgaacatgacaca
gacggatccggggctgccgtcttgcatgccctcggcctcctggccagggccgtggtcgac
gaactggcagcagaggggtcggcttcggggggcgggctgacgctggtcggtgtcactggt
tcggcaggcaagacctcgaccaaggacctgattgcggcgctgcttcgcgaacgcggtgag
gtggtcgccccaccaggctcgttcaacaacgaactgggtttgccgtggactgtgctccgc
gccgacgagaagacccgcttcctggtcctcgagatgtcggcccgcggggtcggtcacgtc
ggcgaactgaccaagatcgcgccgccgaagatcggcgtcgttctcaatgtcggcaccgcc
catctcggtgaattcggttcgcgtgaagcgatcgcggtcgccaaaggtgaactggtggaa
gcactcccgtcggcagccgacggtggagttgcggtcctcaacgccgacgaccgcatggtc
gccgcaatggcgagtcgaaccaaggcccggatcgtattcgtcggtcagtccgaagactgc
gacgttcgggcgaccgacgtggttgtcgacgaccaggcccgggcttccttcacgctgaac
tgttcacagggttctgcgcgtattcgcctggccgttcacggcgaacatcacgtgagcaac
gctcttgccgctgcggccgtcgcactcgagaacggcctcgcggttgcagacatcgctcgt
gtcctcgagggcacgaaggcagcgtcagcgaggcggatggaagtcaccgagcgcgccgac
ggcgtcaccgtcgtcaacgacagttacaacgcaaatcccgattccatgcgcgctgcgctc
aaagcgttggtgtccatggcgcgatcggatcggcacttcgggcgccgtagctgggctgtg
ctcggtgagatgggtgaactcgggccggaatcggtcgtcgagcatgacgcgatcggtcgc
ctggccgtcagactcgatgtcagcaagttgatcgtcgtcggaacgggccgcacctcgcgt
gcgatgcatcaaggtgcggtgatggaggggtcgtggggtgacgagtccgtcgtcgtgcca
gacgcagctgcggcaatcgccattctcgaagcggaacttgaaccgggcgatctcgtcctg
gtgaaggcgtccaagtctgttgaactgtggacggtcgccgaagcgattctggccgcaacg
cccagcgacaacaccggtgacgcgaacacggatggcgagaacggcggggattcgcagtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NITE (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (27)   

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