KEGG   Rhizobium etli CFN 42: RHE_CH00026
Entry
RHE_CH00026       CDS       T00317                                 
Name
(GenBank) probable nuclease/helicase protein, ATP dependent
  KO
K16898  ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
Organism
ret  Rhizobium etli CFN 42
Brite
KEGG Orthology (KO) [BR:ret00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ret03400]
    RHE_CH00026
Enzymes [BR:ret01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     RHE_CH00026
DNA repair and recombination proteins [BR:ret03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    AddAB pathway proteins
     RHE_CH00026
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PDDEXK_1 UvrD_C_2 AAA_30 DEAD
Other DBs
NCBI-ProteinID: ABC88859
RhizoBase: RHE_CH00026
UniProt: Q2KE77
Position
complement(22372..25923)
AA seq 1183 aa
MSDPTALPTDDDPGAWIGWTTIQQAIASDPERSAWVSANAGSGKTHVLTQRVIRLLLAGA
RPSAILCLTYTKAAASEMSNRVFERLADWVVLDDEDLSRRIMQIEGTAPDALKLAEARRL
FAKALETPGGLKIQTIHAFCEALLHQFPLEANVAGHFSVLDDRAAAALLSDARRALLTAT
APVEGSALAEAFAYVLNLGDESGLENLLADIVANRNAIRRFTTAAERRGGVEAVLRDRLG
LAAGDTESRIAAQYWPLPELSGRILELYLSLADQKGGAKAQEVAYGLRLAGRERDDDRRA
EMLEKIFLTAKGEPKSDSQFLVKAMLAEAPQLTSAIAVARAHVAASRDRLKMMRMFGATQ
AALVLAGRLNHDYEELKKQRSQLDFEDLITRTADLLTKSGVGPWIHYKLDRGIDHILVDE
AQDTSPIQWSVIQSLAEDFFSGESARPGVRTLFAVGDEKQSIYSFQGARPERFSEESDRT
RRRVSDSGLSFSSVRLPLSFRSTADVLEAVDEIFRTSDNARGLSAVGEPVVHRSSRIGHP
GAVDLWEVVAPEAVVKEEDWTAPFDATPESAPAAILARRIAHSIGTLVGRETIVDKGKER
LIEAGDILVLVRKRDAFVNALTRALKRRGDIPVAGADRLTLTSHIAVQDLLALGRFLLLP
EDDLSLAAVLKSPLFDLSEDDIFAIAGLRDDNESVWSHLKRFAADGTERFRAAVERLELF
LRQSRHLSVHDFYARVLGSHGGRRQFLARLGTEVSDILDEFLTFTLDHESSGLPGLQSFI
STLELEAPEVKREQDKGRNEVRIMTVHASKGLEAPIVFLVDGGSKPFTHTHLPKLRLIET
DADEPPLPAWVPVSDLANSLTQNDAARIQMLAEEEYRRLLYVAMTRAADRLVVCGYRGVR
VNNDTWHMMISTALSEGHPHVEAATFSGPDGEWPGIRWRVPRVERRFERIDRSEAHDSQE
ALPEGLSRPLPPQAELPRPLSPSGAGTIVDEDEGSLFVASPLFGEKERSDHSLEKGRLIH
RMLQALPDIPPVERPDAASRYAERAARLWPEAERRRLVDSVVKLMDEEGLQPVLGAEARP
EVSIMGTLTLEDRRYAVSGRIDRLAVLADRIVILDYKTNRVPPSTEEAIPFAHKAQLAIY
REILAPLYPGKRIDCMLVYTENASLYTLSEKALGLALAGLKTK
NT seq 3552 nt   +upstreamnt  +downstreamnt
atgagtgacccgaccgcacttccgactgacgacgatcccggcgcctggatcggctggact
acgatccagcaggcgatcgcctccgatcccgagcgctccgcctgggtctcggccaatgcc
ggttccggcaagacgcatgttctgacccagcgtgtcattcgtctgctgcttgccggcgcg
cggccttccgccattctctgcctgacctataccaaggccgcggcctccgaaatgtcgaat
cgcgtcttcgaacggctggcggactgggtggtgctcgacgacgaagatctcagccggcgg
atcatgcagatcgaggggacggcgcccgacgcgctgaaactcgcggaggcgcgccggctg
tttgcgaaggcgctggaaacgccgggcgggttgaagatccagacgatccatgccttttgc
gaagcgctgctgcaccaattcccgctggaggccaatgttgccgggcatttctcggtcctc
gacgatcgcgcggcggcggcactgctttccgatgcgcgccgggcgctgctgacggcgacc
gcgccggtagaaggcagcgcccttgccgaggctttcgcctatgtgctcaatctgggcgac
gaatccggcctggagaacctgctcgccgacatcgtcgccaatcgcaacgccattcgccgc
ttcacgacggctgccgagcgacgcggcggcgtggaggctgttctgcgcgacaggctcggc
cttgccgccggcgatacggaaagccggatcgcggcgcaatattggccgttgccggagctt
tcgggccgcattctggagctttatctgtcccttgccgaccagaagggcggcgccaaggcg
caggaggttgcttatggcctcaggctcgccggccgggagcgcgacgatgacaggcgcgcc
gaaatgctggagaaaatcttcctgacggcaaaaggcgagcctaaatcggactcgcagttc
ctggtcaaggccatgcttgcggaagcgccgcaattgacgagcgccatcgccgtcgcccgc
gcgcatgttgcggcaagccgtgaccggttgaaaatgatgcgaatgttcggcgccactcag
gcggcgctggtgctcgccggtcggctgaatcacgattacgaggagctgaagaagcagcgc
agccaactggatttcgaggacctgatcacccgcaccgccgacctgctgacaaagagtggc
gtcggtccctggatccattacaagctcgaccgaggtatcgatcatatcctcgtcgacgag
gcgcaggataccagtccgatccaatggagcgtcatccagtcgctcgccgaggatttcttt
tccggcgagagcgcccggccgggcgtgcgcacgctctttgccgtcggcgacgagaaacag
tcgatctactcctttcagggggcacggcccgagcgtttttccgaagagagcgaccggacg
cggcggcgggtctccgacagcgggctgagcttttcctccgtgcggctgccgctctccttc
cgctcaaccgccgacgtgctcgaggccgtcgacgagattttcaggacatcggacaatgcg
cggggtctcagcgccgtcggtgagccggtcgtgcatcgatccagccgcatcgggcatccg
ggcgccgtcgacctctgggaagtggtcgcgccggaagcggtggtgaaggaggaggattgg
acggcgcccttcgatgcgacaccggaaagcgcgccggctgcaatcctcgcgcggcggatc
gcccattcgatcgggacgctcgtcggccgtgaaacgatcgtcgacaaaggtaaggagcgg
ctgatcgaggccggcgacatcctcgttctggtgcgcaagcgcgacgccttcgtcaatgcc
ttaacccgcgccttgaagcgccgcggagacattcccgtcgccggcgccgaccgactgacg
ctgaccagccatatcgccgtgcaggatctgctggcgctcggtcgtttcctgcttctgccg
gaggacgatctttcgctcgctgccgtgctcaaaagcccgcttttcgatctttccgaggac
gatatctttgcaatcgccggcctgcgggacgacaacgagagcgtctggagccatctcaaa
aggtttgcggccgacggcaccgaacgtttccgtgctgccgtcgaaaggctggagctgttt
cttcggcagtcgaggcatctgtcggtccacgatttctatgcgcgcgtgctgggcagccat
ggcgggcggcggcaatttcttgcccgcctcggcaccgaggtcagcgatattctagacgag
ttcttgacctttaccctcgaccacgagagttccggcctccccgggctgcaatccttcatc
tcaacgctggagctcgaagcgccagaggtgaagcgtgagcaggacaaggggcgcaacgag
gtcaggatcatgaccgtgcatgcctccaagggtcttgaagcaccaatcgtcttcctcgtc
gacggcggctccaagcccttcacgcatacgcatctgccgaagcttcgcctgatcgaaacg
gacgccgacgagccgccgctgccggcctgggttcccgtctccgacctcgccaattcgctg
acgcaaaacgatgcagcgcggatccagatgctggcggaagaggagtatcgtcgcctgctt
tatgtcgccatgacgcgggctgccgaccggctggtcgtctgcggctatcgtggcgttcgt
gtcaataacgatacctggcacatgatgatttccaccgcgctcagcgaaggccatccgcat
gtggaggcggccaccttctccggcccagacggggaatggccgggcatccgatggcgtgtg
ccgcgggtggagcggcgcttcgagcgtatcgatcgcagcgaagcgcacgacagccaggag
gcgttgccggaaggtctgtcgcggccactgccgccgcaggctgagctgccccgccccctc
agcccgtccggcgccgggacgatcgtcgacgaagacgagggcagcttgtttgtcgcttcg
ccgctgttcggcgagaaagagcgcagcgatcattcgctggaaaagggcaggctgatccat
cgcatgctgcaggcgcttcccgacattccgccggtcgaacggccggatgccgcgagccgc
tatgccgagcgggcggcgcggctctggccggaagcggaacgccgccggctcgtcgattcg
gttgtgaaactaatggacgaagagggtctgcagccggttctcggggcagaggcccggccg
gaagtttcgatcatgggaacattgacgcttgaagacaggcgttatgcggtctccggccgt
atcgaccggctggccgtgcttgccgatcgcatcgtcattctcgactacaagaccaatcgg
gtgccaccttcgactgaggaggcgatccctttcgcacataaggctcagctcgcgatctat
cgtgagatcctggcgccgctctatcccggcaaacgcatcgactgcatgctcgtctatacc
gagaatgcgtcgctctatacgctgagtgaaaaggcgctcggtttggcgcttgcaggactc
aagacaaagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   OC (1)   
   RHIZOBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (33)   

Download RDF
DBGET integrated database retrieval system