KEGG   Rhizobium etli CFN 42: RHE_CH03406
Entry
RHE_CH03406       CDS       T00317                                 
Name
(GenBank) probable pseudouridylate synthase, ribosomal large subunit protein
  KO
K06178  23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
Organism
ret  Rhizobium etli CFN 42
Brite
KEGG Orthology (KO) [BR:ret00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ret03009]
    RHE_CH03406
Enzymes [BR:ret01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.22  23S rRNA pseudouridine2605 synthase
     RHE_CH03406
Ribosome biogenesis [BR:ret03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    RHE_CH03406
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-ProteinID: ABC92163
RhizoBase: RHE_CH03406
UniProt: Q2K4S3
Position
3579236..3580174
AA seq 312 aa
MRADGALSEAPTSFCTPIAPWFGCHAGIVVPFVPRSGIETGQGWQMRDRRPSHKTRERLK
PAADTAGKRVTLPRALSKLGYCSRTQAERLIAESRVAVDGRTVSDASAWVDLSTARISVD
GLVIAAEAKIYLMLNKPRGLVTTRQDPEGRPTVYDCLKNFDIPHLSPVGRLDKASEGLLL
FTNDTEFAQTLLDPLTHVTKTYHVQIDRLMDDEEIAAMTSGIRHDGELLTAAATRRLRQG
DRNSWIEVELDEGRNRQIRRMLEALGAECLRLVRVAIGGLELGELPKGAVRALTEGELQG
LRRRAGMERARR
NT seq 939 nt   +upstreamnt  +downstreamnt
ttgcgcgcagacggcgctttatccgaagcgccgacgtcgttttgcacccctatcgctccc
tggtttggttgtcatgctggcatcgttgtgccgttcgtgccaagaagcggcatcgagact
ggacagggatggcagatgagagaccggcgcccatcgcataagacgcgcgagcggttaaag
cctgccgccgacactgcaggcaagcgggtcacccttccgcgcgccctttccaaactcggc
tattgctcccgtacccaggccgaacggctgattgccgaaagccgcgtcgccgtcgacggc
cgtaccgtcagcgatgcctctgcatgggtcgatctgtcgacggcgaggatcagtgtcgat
ggacttgtcattgccgccgaggcgaaaatctatctgatgctcaacaagccgcgcgggctc
gtcacgacccgccaggatcccgagggcaggccgacggtctatgattgcctcaagaatttc
gacatcccgcacctctctccggtcggacggctcgacaaggcgagcgaaggcctgctgctt
ttcaccaacgacaccgaattcgcccagaccctgctcgatccgctcacccatgtgaccaaa
acctatcatgtccagatcgaccgcctcatggacgacgaggaaattgccgccatgacatcc
ggcatccgtcatgacggcgagttgctgaccgccgccgccacacgacgcctgcgccagggt
gacaggaactcatggatcgaggtcgagctcgatgaaggccgcaatcgccagatccgtcgt
atgctggaggcgctcggggccgaatgcttgcgccttgtgcgggtcgcaatcggcgggctc
gaactcggcgaactcccaaaaggcgccgtgcgtgcgctgaccgagggagaattgcagggg
ttgcgccgaagagccggcatggaaagggcgagacgttga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
   RHIZOBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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