KEGG   Rhizobium etli CFN 42: RHE_CH03482
Entry
RHE_CH03482       CDS       T00317                                 
Symbol
ruvB
Name
(GenBank) holliday junction DNA helicase protein
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
ret  Rhizobium etli CFN 42
Pathway
ret03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ret00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    RHE_CH03482 (ruvB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ret03400]
    RHE_CH03482 (ruvB)
Enzymes [BR:ret01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     RHE_CH03482 (ruvB)
DNA repair and recombination proteins [BR:ret03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     RHE_CH03482 (ruvB)
    RecFOR pathway proteins
     RHE_CH03482 (ruvB)
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 TIP49 Mg_chelatase AAA_14 AAA_3 Rad17 AAA_22 AAA_2 AAA_16 nSTAND3 AAA_17 ResIII AAA_28 AAA_18 RNA_helicase DUF815 TsaE AAA_33 NTPase_1 IstB_IS21 AAA_24 NB-ARC MCM ABC_tran Sigma54_activ_2 AAA_7 Bac_DnaA NACHT Cytidylate_kin AAA_19
Other DBs
NCBI-ProteinID: ABC92238
RhizoBase: RHE_CH03482
UniProt: Q2K4J8
Position
3666214..3667254
AA seq 346 aa
MSEPARLISPEKRGEDLDITLRPQSLDEFTGQAEARANLKVFIEAAKNRGEALDHVLFVG
PPGLGKTTLAQIMAKELGVNFRSTSGPVIAKAGDLAALLTNLEERDVLFIDEIHRLNPAV
EEILYPAMEDYQLDLIIGEGPAARSVKIDLSKFTLVAATTRLGLLTTPLRDRFGIPVRLT
FYTVEELELIVRRGARLMNLPMTEEGAREIARRARGTPRIAGRLLRRVRDFAEVARAEAV
TREIADEALTRLLVDNVGFDQLDKRYLNMIAVNFGGGPVGIETIAAGLSEPRDAIEDIIE
PYMIQQGFIQRTPRGRVLTAIAWKHLGMQPPKEMEAAQFRLFQEDD
NT seq 1041 nt   +upstreamnt  +downstreamnt
atgagcgaacccgcccgcctgatatcgccggaaaagcggggcgaagatctcgacattacc
ctgcgcccgcaatcgctggacgaattcaccggccaggcggaagcgcgcgccaatctcaag
gtcttcatcgaggcggcgaagaaccgcggcgaggcgctggaccatgtgctcttcgtcggc
ccgcccggtctcggcaagacgacgctggcgcagatcatggcgaaggaactcggcgtcaat
tttcgctcgacgtcaggccctgtcatcgccaaggccggcgaccttgccgcgctgctgacc
aatctcgaggagcgcgacgtgctcttcattgatgagatccaccgcctcaacccggccgtt
gaggaaatcctctatcccgccatggaggattaccagcttgacctcatcatcggggaaggc
cctgccgcgcgctcggtgaagattgacctctcgaaattcacgcttgtcgccgctaccacc
cgcctcggcctgctgacgacgccgctgcgcgatcgtttcggcatcccggtgcggctcacc
ttctataccgtcgaggaactggagctgatcgtgcgccgcggcgcgcggctgatgaacctg
ccgatgaccgaagagggcgcccgcgagatcgccaggcgcgcccgcggtacgccgcgcatt
gccggccggctgctgcggcgcgtgcgtgatttcgccgaagtggcaagggccgaggcggtc
acccgcgagatcgccgacgaagcgctgacccgcctgctggtcgacaatgtcggttttgac
cagctcgacaaacgttacctcaacatgatcgccgtcaatttcggcggcggccccgtcggc
atcgaaaccatcgccgccggcctttccgagccgcgcgacgcgatcgaggacatcatcgag
ccctatatgatccagcagggtttcattcagcgcactccgcgcggccgtgttctgaccgca
atcgcgtggaaacatctgggaatgcaaccgcccaaggaaatggaggctgcgcagttccgg
ctgttccaggaggacgactga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
   RHIZOBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (34)   
   Pfam (34)   
All databases (48)   

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