KEGG T00317: RHE

Rhizobium etli CFN 42: RHE_CH03891

Entry

RHE_CH03891 CDS T00317

Gene name

mdh

Definition

malate dehydrogenase (EC:1.1.1.37)

Orthology

K00024

malate dehydrogenase [EC:1.1.1.37]

Organism

ret Rhizobium etli CFN 42

Pathway

ret00020	Citrate cycle (TCA cycle)
ret00620	Pyruvate metabolism
ret00630	Glyoxylate and dicarboxylate metabolism
ret00680	Methane metabolism
ret01100	Metabolic pathways
ret01110	Biosynthesis of secondary metabolites
ret01120	Microbial metabolism in diverse environments

Module

ret_M00011	Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ret_M00012	Glyoxylate cycle

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:ret00020]
Metabolism; Carbohydrate metabolism; Pyruvate metabolism [PATH:ret00620]
Metabolism; Carbohydrate metabolism; Glyoxylate and dicarboxylate metabolism [PATH:ret00630]
Metabolism; Energy metabolism; Methane metabolism [PATH:ret00680]

SSDB

Motif

Pfam:

Ldh_1_N Ldh_1_C Glyco_hydro_4 UDPG_MGDP_dh_N

Other DBs

NCBI-GI:

NCBI-GeneID:

RhizoBase:

UniProt:

Position

complement(4124719..4125681)

AA seq 320 aa
MARNKIALIGSGMIGGTLAHLAGLKELGDIVLFDIADGIPQGKGLDIAQSSPVEGFDANL
TGASDYSAIEGADVCIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPNAFVICIT
NPLDAMVWALQKFSGLPANKVVGMAGVLDSSRFRLFLAKEFNVSVQDVTAFVLGGHGDTM
VPLARYSTVGGIPLTDLVTMGWVTKERLEEIIQRTRDGGAEIVGLLKTGSAYYAPAASAI
EMAESYLKDKKRVLPCAAHLTGQYGVKDMYVGVPTVIGAGGVERVIEIDLNKTEKEAFDK
SVAAVAGLCEACINIAPALK

NT seq 963 nt +upstreamnt +downstreamnt
atggcgcgtaataagatcgcactcattggttctggcatgattggtggcacgctggcgcat
ctcgccggcttgaaggagttgggcgacatcgtcctcttcgacattgccgacggcattccc
cagggcaagggcctcgatatcgcacagtcctccccggtcgaaggcttcgatgccaacctg
acaggcgcaagcgattattcggcaatcgaaggtgccgatgtctgcatcgtcaccgccggc
gttccgcgcaagcccggcatgagccgcgacgaccttctcggcatcaacctcaaggtcatg
gaacaggtgggtgccggcatcaagaagtatgcgccgaacgccttcgtgatctgcatcacc
aacccgctcgacgccatggtctgggcactgcagaagttttccgggcttccggccaacaag
gtcgtcggcatggccggcgttctcgactcttcgcgtttccgcctcttcctcgccaaggaa
ttcaacgtctccgtccaggacgtgacggccttcgttctcggcggccacggagacacgatg
gtgccgctcgcccgctattcgacggtcggtggcattccgctcaccgatctcgtcaccatg
gggtgggtcaccaaggagcgcctggaagagatcatccagcgcacccgtgacggcggcgcc
gaaatcgtaggcctgctgaagaccggttcggcctactacgcgccggccgcctcggccatc
gagatggccgaatcctacctcaaggacaaaaagcgcgtcctgccctgcgcggcccatctc
accggtcagtacggcgtcaaggacatgtatgtcggcgttcccacggttatcggcgccggc
ggcgtcgagcgcgtcatcgagatcgaccttaacaagaccgagaaggaggccttcgacaag
tcggtggctgccgttgccggtctctgcgaggcctgcatcaacatcgcgcctgccctcaag
taa

All links

Pathway (9)   
   KEGG PATHWAY (7)   
   KEGG MODULE (2)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
   RHIZOBASE-RET (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (28)   

Download RDF

DBGET integrated database retrieval system