Entry |
|
Gene name |
hemD
|
Definition |
(GenBank) uroporphyrinogen-III synthase protein
|
KO |
| uroporphyrinogen-III synthase [EC: 4.2.1.75] |
|
Organism |
ret Rhizobium etli CFN 42
|
Pathway |
| Porphyrin and chlorophyll metabolism | | Metabolic pathways | | Biosynthesis of secondary metabolites | | Microbial metabolism in diverse environments |
|
Brite |
KEGG Orthology (KO) [BR:ret00001]
Metabolism
Metabolism of cofactors and vitamins
00860 Porphyrin and chlorophyll metabolism
RHE_CH03905 (hemD)
Enzymes [BR:ret01000]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.75 uroporphyrinogen-III synthase
RHE_CH03905 (hemD)
 |
SSDB |
    |
Motif |
 |
Other DBs |
NCBI-ProteinID: RhizoBase: UniProt: |
Position |
4136747..4137454
 |
AA seq |
235 aa  
MRVLVTRPAHSATRTAQRLRDMGHEPLLLPLRRPQHDSAAAAGALAATHGAIAVTSGEAA
RVLSALGETLPPHLDRPVFAVGERTAQAAQRLGFRSVTASSGNGRDLADLVGAQRVEDLL
YLAGRPRAEIFEGRLRELGIRFSVAECYRMLPVAPGPADIESIFSGHRPDAVLFYSRQTA
EDFFQVAELRSALSEQGGIRLLCLSEAVAQAIPTFLKETVAISSMPDEISLLSLL |
NT seq |
708 nt  +upstreamnt +downstreamnt
atgcgtgtgctcgtcacccgccccgcgcattcggcgacaagaacagcacaacgtctgcgc
gatatgggtcacgagcctctgctgctgccgctgcgtcgaccacaacatgacagtgccgct
gccgccggtgcgcttgcagccacgcacggcgcgatcgcggtaaccagcggcgaagccgcc
agggtgctgtcggctctcggcgagacacttcctccgcaccttgaccgcccggttttcgcg
gtcggcgagaggacggcgcaagcggcgcagcggcttggcttccggtcggtcaccgcatct
tcgggcaacggccgcgatctcgccgatctcgtcggcgcgcagagggtggaagacctgctt
tacctcgccggcaggccgcgcgccgaaatcttcgaagggagattgcgcgaactcgggatc
cgcttttccgtcgccgaatgttatcgcatgctgccggtcgctcccggcccggccgacatc
gagtcgattttttccggccatcgcccggatgccgtgcttttctattcccggcaaacagcg
gaggatttctttcaggtggcagagctgcgatcggccctgtcggaacagggcggaatccgc
cttctctgcctgagcgaggcggtagcgcaggccattccgaccttcctgaaagagaccgtg
gcgatttcgtcgatgccggatgagataagccttttgtcgctgctttga |