KEGG   Rhizobium etli CFN 42: RHE_CH03957
Entry
RHE_CH03957       CDS       T00317                                 
Symbol
ffh
Name
(GenBank) signal recognition particle GTP-binding protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
ret  Rhizobium etli CFN 42
Pathway
ret02024  Quorum sensing
ret03060  Protein export
ret03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ret00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    RHE_CH03957 (ffh)
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    RHE_CH03957 (ffh)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RHE_CH03957 (ffh)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ret02044]
    RHE_CH03957 (ffh)
Enzymes [BR:ret01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     RHE_CH03957 (ffh)
Secretion system [BR:ret02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   RHE_CH03957 (ffh)
  Eukaryotic Sec-SRP protein
   RHE_CH03957 (ffh)
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA AAA_25 AAA_19 AAA_30 Zeta_toxin AAA_33 DnaB_C AAA_22 AAA_31 AAA_17 AAA_14 AAA_5 AAA_16 ArsA_ATPase 6PF2K APS_kinase ResIII AAA NACHT DO-GTPase1 Thymidylate_kin AAA_7 AAA_24
Other DBs
NCBI-ProteinID: ABC92702
RhizoBase: RHE_CH03957
UniProt: Q2K384
Position
4184268..4185845
AA seq 525 aa
MFENLQDRLGSILNGLTGRGALSEADVSAALREVRRALLEADVALDVVRSFTDRVREKAV
GAEILKSIKPGQMVVKIVHDELIEMLGGEGVGIDLHAPAPVVVMMVGLQGSGKTTTTAKI
AHRLSTREKKKVLMASLDTRRPAAQEQLRQLGAQASIDTLPVITGQSPTDIAARAVQAAK
LGGHDVVILDTAGRTHIDEPLMVEMADIKKRSNPHEILLVADSLTGQDAVNLARNFDERV
GITGLVLTRMDGDGRGGAALSMRAVTGKPIKLIGVGEKMSELEEFHPRRIADRILGMGDI
VSLVERAAENIDAEKAAAMAAKMAKGKFDLDDLADQLRQMQKMGGMGGIMGMMPGMAGMK
DKMAAAGLDDKLFGRQIAIIQSMTKAERANPDLLKHSRKKRIAAGSGTDAAAINKLLKMH
RQMADMMKMMGGKGKGGMMKQMMSGLAGKMGLGSGMGGGMPDLSNIDPRQLEALQKQAEA
AGLGKPGGGMPGLGGLPGGLPGLGGAKLPGLGGGFPGLPGLPKKK
NT seq 1578 nt   +upstreamnt  +downstreamnt
atgtttgaaaacctccaggaccgtcttggatccattctgaatggactgacaggccgtggc
gcgctttcggaagccgatgtctccgcagcgctgcgcgaggttcgccgtgcgctgctcgaa
gcagacgtcgcgctcgatgtcgtgcgctccttcaccgaccgcgtgcgtgaaaaggctgtc
ggcgccgagatcctgaagtcgatcaagcccggccagatggtcgtcaagatcgtccatgac
gaactgatcgagatgctcggcggcgaaggtgtcggcatcgatctgcatgcgcccgcgccc
gtggtcgtgatgatggtcggcctgcagggctccggcaagacgacgacaactgccaagatc
gcccatcgcctgtcgacgcgcgagaagaagaaagtgctgatggcgtcgctcgacacgcgc
cgtccggcagcccaggagcagcttcgccagctcggcgcccaggccagcatcgacacgctg
cctgttatcactggccagtcgccgaccgatatcgccgcccgtgcggtgcaggcggccaag
ctcggcggccatgacgtcgtcatcctcgataccgccggccgcacccatatcgacgagccc
ttgatggtcgagatggccgacatcaagaagcgctcgaacccgcatgaaatcctgctggtc
gccgacagcttgaccggccaggatgccgtcaacctcgcccgcaacttcgatgaacgcgtc
ggcatcaccggtctggtgctgacccgcatggacggcgacggccgtggcggtgctgccctg
tcgatgcgcgccgtcaccggcaagccgatcaagctgatcggcgtcggcgagaagatgagc
gagctcgaggaattccatccccgccgcatcgccgaccgcatcctcggcatgggcgacatc
gtctcgctcgtcgagcgcgcggctgagaacatcgacgccgagaaggcggccgccatggcc
gccaagatggccaagggcaagttcgatctcgacgacctcgccgatcagttgcgccagatg
cagaagatgggcggcatgggcggcatcatggggatgatgcccggcatggcgggcatgaag
gacaagatggctgccgccggcctcgacgacaagctgttcggccgccagattgccatcatc
cagtcgatgaccaaggccgagcgcgccaatcccgacctcctcaagcattcgcgcaagaag
cgcatcgccgccggctccggcaccgatgccgccgccatcaacaagcttctgaagatgcac
cgccagatggccgacatgatgaagatgatgggcggcaagggcaaaggcggcatgatgaag
cagatgatgagcggccttgccggcaagatggggcttggcagcggcatgggtggcggcatg
cccgatctctcgaatatcgatccccggcagctcgaagccctgcagaagcaggccgaagcg
gcggggcttggaaagccgggtgggggtatgcccggtctcggcggtctgccgggtggtttg
cctggcctcggcggcgccaagctgccgggcctcggcggtggtttcccgggattgcccggt
ttgccgaagaagaagtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
   RHIZOBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (26)   
   Pfam (26)   
All databases (46)   

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