KEGG   Rhizobium etli CFN 42: RHE_PA00070
Entry
RHE_PA00070       CDS       T00317                                 
Symbol
virD4
Name
(GenBank) transport secretion system IV, VirD4 protein
  KO
K03205  type IV secretion system protein VirD4 [EC:7.4.2.8]
Organism
ret  Rhizobium etli CFN 42
Pathway
ret03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ret00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    RHE_PA00070 (virD4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ret02044]
    RHE_PA00070 (virD4)
Enzymes [BR:ret01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     RHE_PA00070 (virD4)
Secretion system [BR:ret02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   RHE_PA00070 (virD4)
SSDB
Motif
Pfam: T4SS-DNA_transf TraG-D_C TrwB_AAD_bind
Other DBs
NCBI-ProteinID: ABC92935
UNAM_a: RE1PA0000070
RhizoBase: RHE_PA00070
UniProt: Q2K2F8
Position
p42a:75279..77279
AA seq 666 aa
MNSSKSTPLRLAVSVVCSLAAGLCVASLYVTFRQGFNGEAMMTFSVFAIWYESPLYLGHT
TSVFYYALAIVVSTSAVVLLSQLFVSLRNREHHGTARWAEFGEMRRAGYLQRYTSINGAV
FGKTCGPHWFGSYLTNGEQPHSLVVAPTRAGKGVGVVIPTLLTFRGSVIALDVKGELFDL
TSRARKANGNVVFKFAPLDPERRTHCYNPVLDIAAMPPERQFTETRRLAANLITAKGKGA
EGFIDGARDLFVAGILACIERGTPTIGAVYDLFAQPGEKYKLFAQLAEESQNKEAQRIFD
NMAGNDTKILTSYTSVLGDGGLNLWADPLVKAATSRSDFSIYDLRRRKTCVYLCVSPNDL
EVVAPLMRLLFQQVVSILQRSLPGKDERYEVLFLLDEFRHLGKLEAIETAITTIAGYNGR
FMFIIQSLSALTGTYDEAGKQNFLSNTGVQVFMATADDETPTYISKAIGEYTFKARSTSY
NQTRMFDQNIQISDQGAPLLRPEQVRLIDDRNEIILIKGHPPLKLRKVQYYSDRALKRIF
EAQTGSLPEPAPLVLPENINRGDLEQPTVLAAAREPGDKDFVGDNAETDGYNGNCNHDND
GAIGFDIPYGPIEIDDLEEYASTACVTADAGPSAEVAPALVAQEQLLKRIIALQQRYRSG
SSNPGD
NT seq 2001 nt   +upstreamnt  +downstreamnt
atgaactcgagcaagagcacgcccctacgtttggccgttagtgtcgtatgctcgctggca
gccggtctttgtgttgcaagcttgtatgtaacgttccgccaaggctttaatggcgaagcg
atgatgaccttcagtgtcttcgccatctggtacgagtcgccgctctatctggggcatacg
acctcggtattctactacgctctggccattgtcgtatcaacttcagccgtcgttctactc
agccaactgttcgtgtcgctgcgcaaccgcgagcatcatggaacggctcgctgggcagaa
ttcggggaaatgcgacgtgccggctacctgcagcgttacaccagtatcaatggtgcggtg
tttggcaagacctgtggtccccactggttcggcagctatctgaccaacggcgaacagccc
catagtctggtcgtcgcgccgacgcgagccggcaagggcgtcggcgtcgtcattccgacg
ctgctgaccttcaggggctcggtgatagcactcgatgtcaaaggtgagctttttgacctg
acgtccagggcacgaaaggcaaacggcaacgtcgttttcaagttcgcgcctctggatccg
gagcgacggacccattgctacaatccggttctcgatattgcggcaatgcctcccgagagg
cagtttaccgagacacgccgacttgctgcaaaccttatcactgcgaaaggcaagggagcg
gaaggcttcatcgatggcgcacgagacctttttgttgcgggtatccttgcttgtatcgag
cgcggcactccgacaataggcgcagtctacgacctttttgcccagcctggcgagaagtac
aagctttttgcgcaactcgcggaagaaagccagaataaggaggctcagcgcatctttgac
aacatggcgggcaacgacacgaaaatcctaacctcctatacgtcggtgctcggcgacggc
ggtctcaatctttgggctgatccgctggtcaaggcagcgaccagccgatccgacttttcc
atctacgacctgcgtcgcaggaagacctgcgtttatctttgtgtaagtcccaacgatctt
gaggtcgttgcgccgttgatgcgccttctttttcagcaggtcgtgtcgattttgcagcga
tccctgccagggaaggacgagcgctacgaagttctgtttctcctcgacgaattcaggcat
ctgggcaaacttgaggccatcgagaccgcgatcaccaccatcgccggatacaatggccgt
ttcatgtttattattcagagtctctccgcgctgacgggtacctacgacgaggcgggcaaa
cagaactttctcagcaataccggtgtgcaggtatttatggccaccgctgacgacgaaaca
ccgacatatatctcgaaggctatcggggaatatacgttcaaggcgcgctcgacctcctat
aatcagacacgcatgttcgaccagaacatccagatctccgatcagggggcaccgcttttg
cgccccgaacaggtgcgcttgatcgacgacaggaatgaaatcatcctcataaaggggcac
ccgccacttaaactgcgaaaagtgcaatattactcggatcgcgcgctgaagcgtattttc
gaagcccagaccggttcgctccccgagccagcgccccttgtgctgccggagaacatcaat
cgcggagacctggaacagccgactgtcctcgcggcggcgcgagagcccggcgacaaggat
tttgtaggcgacaatgcggaaaccgatgggtacaacggcaactgcaatcacgacaacgat
ggggccatcggatttgatatcccgtacggcccgattgaaatcgacgatctggaggaatac
gccagcacagcttgtgtcaccgccgatgccggcccgtctgccgaagtcgctccggctctg
gttgcgcaagaacaattgctgaaacggataatcgcgcttcagcaacggtataggtctggc
tcgtcaaaccccggggattga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   OC (1)   
   RHIZOBASE (1)   
   UNAM_A (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (36)   

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