KEGG R.etli: RHE

Rhizobium etli CFN 42: RHE_PD00062

Entry

RHE_PD00062 CDS R.etli

Gene name hrpW

Definition pectate lyase secreted protein

Class

SSDB

Motif Pfam: Pectate_lyase

Other DBs NCBI-GI: 89255320
NCBI-GeneID: 1005160
RhizoBase: RHE_PD00062
UniProt: Q8KKZ2

Position p42d:complement(70657..71571)

AA seq 304 aa
MCGVDGQRPIDFDRTSRFDLESDCLGGSNRADTDFTTIRTRKVSPFEDFSGNPPTLTSYV
PNSRETSENGMDSDPKDLLRKHINWQSDSKKVDPSDEKQATTLQTTTEKPDLSKEGSVIV
VNEPIVVDGGVFDGKGATYTASSKLGDGGQSETQSPLFILKNGATLKNVDLGENGADGIH
VYDGATLENVNWQNVGEDALTVKSAGDITIIGGSAKGATDKIFQINADTRFYLKDFVADG
FTTLVRTNGGKQIDADVTIDGGAFSHGSNVFRTDSSLASVTFLSDITLDDVKNWTRVGDN
QSGV

NT seq 915 nt +upstreamnt +downstreamnt
atgtgtggcgtagatggacaaaggcccatagacttcgacagaacctcccgtttcgacctt
gagtccgattgccttggcggcagcaatagggccgacacggatttcaccaccatccgaacc
cgcaaggtctcgcccttcgaagatttctccggcaacccgccgacactgacctcctatgtg
ccgaattcgcgggaaacgtcggaaaacggcatggattccgaccccaaggatctgctgcgc
aagcacatcaactggcaatccgactccaagaaggtggatccatccgacgagaaacaggcc
acgactttgcagaccacgacggaaaaacccgacctctcgaaagagggcagcgtcatcgtc
gtcaacgagccgatcgtcgtggatggcggcgtgttcgacggcaagggcgcgacctatacg
gcctcgtccaagctcggcgatggcggccagtccgaaacccaatcgccgctgttcattctc
aagaacggcgcgacgctcaagaatgtcgatctcggcgagaatggcgccgacggaatccac
gtctatgacggcgcgacgctcgaaaacgtcaattggcagaatgtcggcgaggatgcgctg
acggtaaaaagcgccggcgacatcactattatcggtggctccgccaagggcgcgaccgac
aagatcttccagatcaatgccgacacgaggttctatctgaaggatttcgtcgctgacggc
tttaccacgctcgtgcgcaccaacggcggcaagcagatcgacgccgacgtcaccatcgat
ggcggggcgttctcccacggcagcaacgtcttccgcaccgacagctcacttgccagcgtg
acgttcctctccgatatcacgctggacgatgtgaagaactggacgcgtgtaggtgacaac
caatcgggcgtctga

All links

Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   RHIZOBASE-RET (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)

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