KEGG T00268: Reut

Ralstonia eutropha JMP134: Reut_B3895

Entry

Reut_B3895 CDS T00268

Definition

ATP-dependent DNA ligase (EC:6.5.1.1)

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

reu Ralstonia eutropha JMP134

Pathway

reu03410	Base excision repair
reu03420	Nucleotide excision repair
reu03430	Mismatch repair
reu03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:reu03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:reu03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:reu03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:reu03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C mRNA_cap_enzyme

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

2:complement(522871..524526)

AA seq 551 aa
MKAFADLYAALDGTTSTKARLAALVDYLRAAPPQDAAWAVYFLAGGKPRQIVPVSLLRDM
ARQAADLPDWLFEESYQAVGDLAETIALLLPDPMDSDHAGLAEWVEQRLLPLRGLPPDEL
MPRLDALWRPLDAHGRLVLFKLITGAFRVGVSRLLVTRALGEVAGIDPKRVAERMVGYTD
LSARPDATRFQALLAPESEDDRELRANGQPFPFFLAHPLQVPLEQFDAVLGDPDNWQVEW
KWDGIRAQLVCRGNQTWLWSRGEELITERFPEIVEAAAPLPDGTVLDGEIVIWQQGRVQP
FALLQQRIGRKTLNAKLLRDAPAILMAYDLLEWRGEDWRTRPQAERRTRLEQLVASHVHP
ALELSPLVQAGDWAHFARLREASREMGVEGFMLKAASAAYGAGRTKDVGIWWKWKIDPFS
VDAVLVYAQRGHGRRASLYTDFTFAVWNAPPGTPNRALVPFAKAYSGLTDEEMRAVDAIV
RRTTVEKFGPVRSVEPTQVFELGFEGIARSGRHKSGIAVRFPRMLRWRTDKPIDEADTLA
TLEAMLPVSPA

NT seq 1656 nt +upstreamnt +downstreamnt
atgaaggcctttgccgatctctacgccgcgctcgacggcaccacctccaccaaggcgcgg
ctggccgcgctggtggactacctgcgcgcggcgccgccgcaggacgccgcctgggccgtg
tatttccttgcaggcggcaagccacgccagatcgtgccggtgtccctgctgcgcgacatg
gcacgccaggccgccgacctgccggactggctgttcgaggaaagctaccaggccgtgggc
gacctggccgagaccatcgcgctgttgttgccggaccccatggattctgatcacgccggc
ctggccgaatgggtcgagcagcgcctgctgccgctacgcggcctgccgcctgacgaactg
atgccgcgcctggatgcgctgtggcggccgctcgacgcgcacggccggctggtgctgttc
aagctgatcaccggcgcctttcgcgtgggcgtatcgcggctgctggtgacgcgcgcgctg
ggtgaagtcgccggcattgaccccaaacgcgtggccgagcgcatggtcggctacaccgac
ctgtccgcgcggcccgacgcaacgcgattccaggcactgctagcaccggaaagcgaggac
gaccgcgaactgcgcgccaacggccagcccttcccgttcttcctcgcgcatccgctgcag
gttccgctggagcagttcgatgccgtgctgggcgacccggacaactggcaggtcgaatgg
aagtgggacggcatccgcgcgcagctagtctgccgcggcaaccagacctggctgtggtcg
cgcggcgaggaactgattaccgaacgctttcccgagatcgtcgaggccgccgcgccactg
cctgacggcaccgtactcgacggcgagatcgtgatctggcaacagggccgcgtgcagccc
ttcgcgctgctgcagcaacgcatcggccggaagacgctgaacgcgaagctgctgcgcgac
gcgccggccatcctgatggcctatgacctgctcgaatggcggggagaggactggcgcacg
cggccgcaagccgagcgccgcacccggctggaacagcttgtcgccagtcacgtgcacccg
gcactcgaactgagtccgctggtgcaggccggcgactgggcgcacttcgccaggctgcgc
gaggcgtcgcgcgagatgggcgtggaaggcttcatgttgaaggccgcaagcgcagcctat
ggcgcgggccgcaccaaggacgtcggtatctggtggaaatggaagatcgacccattctcg
gtcgatgcggtgctggtctacgcgcagcgcggccacggccgccgcgcgagcctctatacc
gacttcacgttcgcggtctggaacgcgccgccaggcacgcccaatcgcgccctggtgccg
ttcgccaaggcctattccggcctgaccgatgaggaaatgcgcgcagtcgatgccatcgtt
cggcgaaccacggtggagaagttcggcccggtgcgcagcgtcgagccaacgcaggtattc
gagctgggctttgaaggcatcgcccgcagcggccggcacaaaagcggcattgcggtgcgc
tttccgcgcatgttgcgctggcgcaccgacaagccgatcgacgaggccgatacgctagcc
acgctggaggcgatgctccccgtcagtccagcgtaa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-REU (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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