KEGG   Rhodococcus erythropolis CCM2595: O5Y_12550
Entry
O5Y_12550         CDS       T02806                                 
Name
(GenBank) hypothetical protein
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
rey  Rhodococcus erythropolis CCM2595
Pathway
rey03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rey00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    O5Y_12550
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rey03019]
    O5Y_12550
Messenger RNA biogenesis [BR:rey03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     O5Y_12550
SSDB
Motif
Pfam: RNase_J_C RMMBL Lactamase_B_2 Lactamase_B Lactamase_B_6
Other DBs
NCBI-ProteinID: AGT92371
Position
2699563..2701572
AA seq 669 aa
MTRPPRRRSASRQAGPPSPPAPETAAKAAPVEAPAAPAAEAAPAAAAPPKKAAAAKSAAT
KSAATKSAAPKKSTEDRSPRKSAGGNRPAASKAGNGRGNKRPENRPAVDPTGRLGTPPKA
PASGLRIVALGGIGEIGRNMTVFEHRGKLLIVDCGVLFPEDQQPGVDLILPDFRYIEDRM
DDVEAVILTHGHEDHIGALPFLLRLRADIPVIGAKFTLALVAAKCREHRLRPNLVEVVEG
NTTTHGPFDCEYFAVNHSIPDALAIAIRTDAGVVLHTGDIKLDQLPLDGRLTDLAGFSRL
GDEGVDLFLVDSTNAEVPGFVTPEREIGGVLDNVIGKAKQRVIVASFASHVHRIQQVVDV
AARYNRRIVFVGRSMVRNMQIAQDLGYLTVPDGLVVDIDTAATLPDDRLVLISTGSQGEP
LAALSRMARGEHRQINIRANDLVVLASSLIPGNENSVFAVVNGLAKRGATVVTQQSAKVH
VSGHASAGELLYLYNAVRPTNAMPVHGEWRHLRANAALAKATGVPEERIVLAEDGVVVDM
VDGLAEIVGRVPVGHVYVDGLSVGDVGEPTLSDRLVLGEGGFIAITIVINESTGRAVSTP
EVSGRGFSDDPTALKAAADLVESDLARLASEGVIDAHRIAQSVRRVVGRWVADKYRRRPM
IIPTVIAVP
NT seq 2010 nt   +upstreamnt  +downstreamnt
atgacccgtcccccccgacgtcgtagtgccagtcgtcaagccggtccgccttcgcctccg
gctcccgaaacggccgcgaaggccgcaccggtagaggcaccagctgcgccggcggcagaa
gcggcccccgcagcagccgccccgcccaagaaggccgcagcagccaaatctgcagcgacc
aagtccgcagccaccaaatctgctgcacccaagaaatcgaccgaagacaggtcgccacgc
aaatctgccggcggcaaccgtccggcagcgtcgaaggcgggcaacgggcgcggaaacaag
cgccccgagaaccgtccggccgtcgatcccacaggtcgcctcggaacacccccgaaggcg
ccggcatcaggtctgcgcatcgttgctctcggcggcatcggcgaaatcggtcgcaacatg
acggtgttcgagcaccgcggcaagttgctgatcgtcgactgcggtgtgctgttccccgaa
gaccagcagcccggcgtcgacctgatcctcccggacttccgctacatcgaagaccgtatg
gacgacgtcgaagccgtcatcttgactcacggccacgaggaccacatcggtgctctaccg
ttcttgctgcgcctgcgcgcggacattccggtcatcggcgcgaagttcactctcgccctc
gttgccgccaagtgccgcgagcatcgcctgcgaccgaacctcgtcgaggtcgtcgaagga
aacaccaccactcacggcccgttcgactgcgagtacttcgccgtcaaccactcgattccc
gacgcgctcgcgatcgcgattcgcaccgacgccggagttgtactgcacaccggtgacatc
aagctcgatcagctgcctctcgacggccgcctgaccgacctcgccggtttctcccgcctg
ggcgacgagggtgtcgacctgttcctcgtggactcgaccaacgccgaggtcccgggattc
gtcacgcccgagcgtgaaatcgggggagtgctcgacaacgtcatcggcaaggcgaagcag
cgcgtcatcgtggcatcgttcgccagccacgtgcaccgcatccagcaggtcgtcgacgtt
gccgctcggtacaaccgtcgcatcgtcttcgtcggccgctcgatggtccgcaacatgcag
atcgcccaggatctcggctacctcacggtgccagacggactggtcgtcgacatcgacacc
gccgccacccttcccgacgatcgcctggtgctcatttcgacgggttcgcagggtgagccg
ttggcagcgctctcgcggatggcacgcggcgaacaccgccagatcaacatccgtgccaac
gacctggtcgttctcgcatcctcgctgattccgggtaacgagaactccgtttttgccgtg
gtcaacggcttggccaagcgcggtgccaccgtcgtgacgcagcagagcgccaaggttcac
gtctcgggccacgcgtccgccggtgagttgctctacctgtacaacgcggttcggcccacc
aacgccatgcccgtccacggtgaatggcggcacctgcgtgccaacgccgcccttgccaag
gccaccggcgttccggaagagcgcatcgtgctggccgaggacggcgtcgtggtcgacatg
gtcgacggcctcgccgagatcgtcggacgcgtaccggtcggacacgtctacgtcgacggt
ctttcagtcggcgacgtcggcgagccgacgctctccgatcgcctcgtactcggcgaaggc
ggcttcatcgccatcaccatcgtcatcaacgagtcgacaggacgtgcagtcagcactccc
gaggtgtccggtcgcggcttctccgacgatccgacggcactcaaggccgccgcggatctc
gtggaatcggacctggcccggttggcgagcgaaggcgtcatcgacgctcatcgcatcgcg
cagtccgtgcgccgcgtcgtcggacgctgggtcgcggacaagtaccgccgccgtccgatg
atcattccgacggtcatcgcggttccgtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (12)   

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