KEGG   Rhodococcus fascians D188: A3L23_03733
Entry
A3L23_03733       CDS       T04328                                 
Symbol
rng
Name
(GenBank) Ribonuclease G
  KO
K08300  ribonuclease E [EC:3.1.26.12]
Organism
rfa  Rhodococcus fascians D188
Pathway
rfa03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rfa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    A3L23_03733 (rng)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rfa03019]
    A3L23_03733 (rng)
   03009 Ribosome biogenesis [BR:rfa03009]
    A3L23_03733 (rng)
Enzymes [BR:rfa01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.12  ribonuclease E
     A3L23_03733 (rng)
Messenger RNA biogenesis [BR:rfa03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     A3L23_03733 (rng)
Ribosome biogenesis [BR:rfa03009]
 Prokaryotic type
  rRNA processing factors
   A3L23_03733 (rng)
SSDB
Motif
Pfam: RNase_E_G IF2_N PCB_OB DnaJ_CXXCXGXG
Other DBs
NCBI-ProteinID: AMY55049
UniProt: A0A161GEN0
Position
3905483..3909082
AA seq 1199 aa
MADQSPPEDVQSTNAGNPEDTDAVSSAKSDAVSVQPDTIELPTRLRVHALAKILGVTSKQ
LLVTLGELGIEARSAQSSLSRDVAESVRDSVNGPTAPAPDASAAESPAPDASTDQQPGPA
SVEVPAETAPSVEVPAAEATLFTSAPTAEPEAAQPTATTFATPVFLQPAAAEPAAESADA
PSEAPARRRRSRKAAPKDEAPSDNNAASDKAADEPANGESPVAENVSTVASDTAAQDTAV
SGAPVSESGASDASSDESGASSAADGSGDDDDQSQPRRRRRGRRGRGRGRGEQSSDDNST
DENSTDEDSDDTDSETDSGTSASSADGESTGADATDDSDADETSGDDQPSSSGRRSRRSR
SRGRGSDRQNSTTDATADGSDNQGEDSDDESESGAQDNFGDSDNGDSDNGDSDGDGSSRR
RRRRRRRKTGAEAAAEAAASSEDDPPNTVVHEREPRNKSRAPRDEVQGISGSTRLEAKRQ
RRRDGRDAGRRRPPILTESEFLARRESVDRVMVVREKATPDHPLTTQVAVLEDGVLVEHF
VTSSATASMVGNVYLGRVQNVLPSMEAAFIDIGRGRNGVLYAGEVNWDAAGLGGSARKIE
QALKPGDQVLVQVSKDPVGHKGARLTTQLSLAGRFLVYVPGGSSTGISRKLPDTERKRLK
EILRDIVPPEAGVIIRTAAEGVSEEELARDVTRLQAQWASIEERSANAETGKGVQPQTLY
EEPDMLVKVIRDLFNEDFSKLVIEGDKAWTTTSNYVETVAPDMMERLQRYEANGSSVDVF
AAHRIDEQLAKALDRKVWLPSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEETVTRNNIE
AAEEVVRQMRLRDIGGMIVVDFIDMVLESNRDLVLRRLTEALGRDRTRHQVSEVTSLGLV
QMTRKKLGTGLVEAFSTTCEHCQGRGIIVHPFPIDAKPDSDGGRPSSSRSDSNGSGNGSR
RRRGKDAKSDGNDRSDNTERSTPNGQSGTTDGTDHPVVDPSIKRAHPVALAMAAHHDDVV
ADVSPAEVSQASSGSAGDKDESVTVVSAEDVAVAAAANEDADVAQATVDSAQAHEPVPAA
ESVGDGGSADTGATQSSDDTPAQPEPVVATPRRGRRVARKAAAPTSAAPDAGVLMVVSAT
ADADDGADAGSAGGDTVADSAPLTAAAEQPVEQVDVPTARPRRRRAAARPAGPPVDIDV
NT seq 3600 nt   +upstreamnt  +downstreamnt
gtggccgatcaaagcccgcccgaagatgtacagagcacgaacgcaggaaatccggaggac
accgacgcggtgtcgtccgcgaaatccgacgcggtttccgtgcaacccgacaccatcgaa
ttgccgaccaggctgcgtgtgcatgcactggcgaaaattctgggcgtgaccagcaagcag
ttgctcgtcactctcggtgagctcggcatcgaagcccgcagcgcgcagtcgagtctgagc
cgagacgttgccgagtcggtgcgcgattcggtgaacgggccgaccgcacccgcccccgat
gcctccgcagcggagtcgccggcaccggatgcgtcgacagaccagcagcccgggcccgca
tcggtagaggtgccggccgagacggctccctcggtagaggtccccgctgccgaggcaacg
ctgttcaccagcgcgcccacggccgagcccgaggccgcccaacccacggccacgaccttc
gcgacgccggtgttcctgcagccggcagcggcagagcccgcagcagaatcggcggatgct
ccgtccgaggcccccgcacggcgtcgacgtagtcgcaaggccgcacccaaggacgaggca
ccgtccgacaacaacgctgcgtccgacaaggccgcggacgagcccgcgaacggcgagtcg
cccgtcgccgagaacgtctcgacggtcgcctccgacaccgccgcgcaggacaccgctgtg
tccggtgctcccgtgtccgagtccggtgcatcggatgcgtcgtccgacgagtccggggct
tcctcggcagcggacggctcgggagacgacgacgaccagtctcagccccgtcgccgtcgg
cgcggtcgccgcggtcgtgggcgtggacgcggagagcagtcgtccgacgacaactcgacc
gacgagaactcgaccgacgaggattcggacgacaccgactccgagacggacagcggcacg
tccgcctcttcggcagacggcgagtccaccggggcggacgcaaccgacgattccgatgcg
gacgagacctccggcgacgaccagccctcgagttcgggacggcgttcgcgtcgctcgcgg
tcacgcggccgcgggtccgatcggcagaactccacgaccgacgccaccgccgacgggtcg
gacaaccagggtgaggacagtgacgacgagtccgagtccggcgctcaggacaacttcggc
gactccgacaacggtgattccgacaacggtgattcggacggagacggctcgagccgtcgt
cgtcggcgccgccgccgtcgtaagaccggagccgaggccgcggcagaagcagctgcctcg
tccgaggacgacccgcccaacaccgtcgtgcacgaacgcgagccgcgcaacaagagccgc
gcaccgcgcgacgaggtgcagggcatctccggttcgactcggctcgaggccaagcggcag
cgtcgccgtgacggccgcgatgccgggcgacgtcgtccgccgattctgaccgaatcggaa
ttcctcgctcgtcgcgagtcggtggaccgcgtgatggtcgttcgcgagaaggccaccccg
gaccatccgttgaccacgcaggtcgccgtgctcgaagacggcgttctggtggagcacttc
gtgaccagtagcgccaccgcctcgatggtcggcaacgtctatctcggccgcgtgcagaac
gtcctgcccagtatggaagcagcgttcatcgacatcggacgtggtcgtaacggtgtgctg
tacgcaggcgaggtcaattgggacgctgccggtctcggcggaagcgcgcgcaagatcgag
caggccctcaagccgggcgatcaggttctggtgcaggtcagcaaggacccggtgggccac
aagggcgctcgcttgacgacgcagctgtcgttggccggacgcttcctcgtctacgttccc
ggtggcagttccaccggcatcagccgcaagctgcccgacaccgagcgcaagcgactcaag
gaaattctgcgcgacatcgttccccccgaggccggcgtcatcatcaggaccgcagccgag
ggcgtcagcgaggaagaactcgcgcgtgacgtgacgcggctgcaggcccagtgggccagc
atcgaagagcggtccgcgaacgccgaaacaggcaagggcgtgcagccgcagacgttgtac
gaagagcccgacatgctggtgaaggtcattcgcgacctcttcaacgaggacttctcgaag
ctcgtcatcgagggtgacaaggcgtggacgaccacgtcgaactacgtggaaaccgtggct
ccggacatgatggagcgcctgcagcgatacgaggccaacggcagctccgtggacgtgttc
gcagctcaccgcatcgacgaacagctggccaaggccctcgatcgcaaggtgtggttgccc
tcgggcggcacgctggtgatcgatcgcaccgaggcgatgacggtcgtcgacgtcaacacc
ggaaagttcaccggctccggcggcaacctggaagagaccgtcacccgcaacaacatcgag
gcggccgaggaagtcgttcggcagatgcgtctgcgcgacatcggcggcatgatcgtcgtc
gacttcatcgacatggtgctggaatcgaaccgcgatctggtgctacgccgcctgaccgag
gcgttgggccgtgatcggacccgtcatcaggtgtcggaggtgacctcgctcggtctggtg
cagatgacgcgcaagaagctcggcacggggttggtcgaggccttctccaccacgtgcgag
cactgccagggtcgcggaatcatcgtgcatccgttcccgatcgacgccaagccggactcc
gacggtggacgcccgagctcgtcacgttcggactcgaacggttcgggcaacggcagcagg
cgtcgacgcggcaaggacgccaagtccgatggaaacgatcggtccgacaacaccgagcgg
tcgacgccgaacggacagtcgggcacgacggacgggaccgaccacccggtggtcgacccg
tcgatcaagcgggcacaccccgtggccctggcgatggcagcgcatcacgacgacgtggtg
gccgatgtcagccccgcggaggtctcgcaggcatcgtccggctccgccggtgacaaggac
gagtcggtcaccgtggtctcggcggaggacgtggctgtcgcggcagcggcgaacgaggac
gcggacgtcgcgcaggcaaccgtggacagcgcgcaggctcacgagccggtgccggctgca
gaatccgtcggcgacggcggttccgcggataccggggcgacgcagtcgtccgacgacacc
cccgcccagccggagccggtggtggccactccacgacggggtcgacgggtggctcggaag
gccgccgcgccgaccagtgctgcgccggatgccggtgtgctgatggtggtttcggccacg
gcagacgccgacgatggtgccgacgcaggttcggccggcggtgacacggtggccgattca
gcgccgctgacagcggcggcggagcagcctgtcgagcaggtggacgtgccgaccgcgcgt
ccgcgcaggagacgggcagcggcacgtccggcaggcccgccggtggacatcgatgtgtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system