KEGG R.felis: RF

Rickettsia felis: RF_0530

Entry

RF_0530 CDS R.felis

Gene name topA

Definition DNA topoisomerase I (EC:5.99.1.2)

Orthology K03168 DNA topoisomerase I [EC:5.99.1.2]

Class Genetic Information Processing; Replication and Repair; DNA
replication proteins
Genetic Information Processing; Replication and Repair; DNA repair
and recombination proteins

SSDB

Motif Pfam: Topoisom_bac Toprim zf-C4_Topoisom
PROSITE: TOPOISOMERASE_I_PROK

Other DBs NCBI-GI: 67458922
NCBI-GeneID: 3401192
UniProt: Q4UM42

Position complement(564265..566595)

AA seq 776 aa
MKLVIVESPAKAKTINKYLGDEFKVIASFGHIRDLPSKKGSVLPDENFAMKYDISDKAGK
YVDAIVKDAKKADAVYLATDPDREGEAISWHVAEVIKEKNKVKSDDFFKRVAFNEITKKA
IIHAVENPRKLDANLVNAQQARRALDYLVGFTLSPLLWRKLPGCKSAGRVQSVALRLICE
REDEIERFKSEEYWDISLKMQNSNNELFTAKLTHVNDQKLEKFSIINEKDAKDLTEKLKS
QNFHVDKIEKKQQKRQPQPPFITSSLQQEAARKLGFSAKKTMQIAQKLYEGVDIGKETIG
LITYMRTDGVTLSNDAIADIRKLIDKNYGDKYLPNSPRIYKSKVKNAQEAHEAIRPTNIT
YTPDSLKEKLEKDYYKLYELIWKRTIACQMENVIMDLVVASLASENKEYLAKANGSTIAF
DGFYKVYRESVDDEAEEENKMLPPLKEQEPLKTKEIIPNQHFTEPPPRYSEASLVKKLEE
LGIGRPSTYASILSVLQDRKYVSLEKKRFMPEELGRLVTVFLVGFFKKYVEYDFTAGLEN
ELDEIAAGKLEWKAALNNFWSGFNHNIESVNEQKITEIISYVQKALDYHLFSENKESKAC
PSCKTGELSLKLGKFGAFLACSNYPECTFRKSIVSGNDNNENDGDLAATPNENKVLGTDK
DGIEIYLKKGPYGPYVQLGEQEGKVKPKRSPVPASLNQNDITLEMALKLLSLPLKIGIHK
DSGEEIMIGYGKFGPYIKYMGKFISIPKKYDFLNLSLDDAMKLIEDNKAKLEKKQA

NT seq 2331 nt +upstreamnt +downstreamnt
atgaaattagtaatagtagaatcgcccgcaaaggcaaaaacgataaataaatatttaggt
gatgagtttaaggtcattgcatcattcggtcatattagagatttaccttctaaaaaaggc
tcagtgttacctgatgaaaattttgcgatgaaatatgatatttccgataaagccggtaaa
tatgtagatgccatagttaaagatgcaaaaaaagctgatgcagtatatcttgcaaccgat
ccggatcgtgagggtgaagctatctcgtggcatgttgcagaggtaataaaagaaaaaaat
aaggttaaatccgatgattttttcaaaagggtagcctttaatgaaatcactaaaaaagca
attattcatgccgttgagaaccctagaaaacttgacgctaacttagtaaatgcccagcaa
gcaagaagagctttagactatttagtcggctttaccctttcacctcttttatggcgtaaa
ttacctggatgtaaatcggcgggacgtgtacagtctgtggctctgcgattaatatgtgag
cgagaagatgaaatagagcgttttaagtcggaagaatattgggatattagccttaaaatg
caaaatagtaataatgaattatttactgctaaattgactcacgtaaacgatcagaagtta
gaaaaattctcaattattaacgaaaaagatgccaaagatttaaccgaaaaattaaaatct
caaaattttcatgttgataagatagaaaagaaacaacaaaaacgtcagccgcaacctcct
tttattacttcatcactacaacaagaagcagcaagaaaattaggttttagtgctaaaaag
actatgcaaatagcacaaaaactttatgagggcgttgacataggtaaggaaactataggg
cttattacctatatgagaaccgacggcgttacattatcaaatgacgcaatagcggatata
cgtaagttaatcgataaaaattacggtgacaaatatttaccgaatagccctagaatttat
aaatccaaagtaaaaaatgctcaagaagctcatgaagctataagaccgacaaatattact
tatactcctgatagcttaaaagaaaagctagaaaaggattattataagctttatgaacta
atttggaaaaggactatagcctgccaaatggaaaatgtgataatggatttggtagttgca
agtttagcttcggaaaataaagaatatttggcaaaagcaaacggatcaactatagcattt
gacgggttttataaggtttatcgtgaaagtgtggacgatgaggctgaagaagaaaataaa
atgctgccgcctttaaaagaacaagaaccgcttaaaactaaagaaattattcctaatcag
cattttacagaacctcctccaagatattcggaagcaagcttagtgaaaaaacttgaagag
cttgggatcggtcgcccttcgacctatgctagtattttatcggttttacaagatcgaaaa
tatgtctctcttgagaaaaaacgatttatgcctgaagaattaggacgtttggtaacggta
ttcttggtcggttttttcaagaaatatgtagaatatgattttaccgcaggtcttgaaaat
gaattagatgaaatagcggcaggtaagcttgagtggaaagctgctttaaataatttttgg
agcggttttaaccataatattgaatcggtaaacgaacaaaaaataaccgagattattagc
tatgtacagaaagctcttgattatcacttgttcagtgaaaataaagaatctaaagcttgt
ccttcatgtaaaacaggcgagcttagcttaaagctcggtaagttcggagcgtttttagca
tgtagtaattaccctgaatgtactttcagaaaatctattgttagcggtaacgataataat
gaaaatgatggcgaccttgccgctactcctaatgagaataaggttttaggtactgataaa
gacggaatagaaatatatctgaaaaaaggaccttacggaccttatgttcagctcggcgaa
caagaaggcaaagtaaagccaaaacgtagccccgtgcctgctagcttgaatcaaaacgac
atcacacttgagatggcattaaagcttctaagcttaccgctaaaaataggtattcataaa
gatagcggcgaggaaattatgataggatacggtaaattcggtccttacataaaatatatg
ggtaaatttatttcaatacctaaaaaatatgattttctaaatttaagcttagatgatgcg
atgaaattaattgaagataataaagcgaagttagaaaagaaacaggcgtaa

All links

Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (3)   
   PROSITE (1)   
All databases (14)

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